mRNA_L-elsbetiae_contig4899.12825.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig4899.12825.1
Unique NamemRNA_L-elsbetiae_contig4899.12825.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Match: D7FR39_ECTSI (Mx1, Mx-like dynamin-related GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR39_ECTSI)

HSP 1 Score: 754 bits (1948), Expect = 8.260e-261
Identity = 493/615 (80.16%), Postives = 515/615 (83.74%), Query Frame = 1 
Query:    1 VFYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCTAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESPENMEALKTAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFTDVEELFVEDTSVVEKRRALQAKKQRLLKGLETLMRMAPDLVATRPGGGA--ADDWTDSAHGLLQQGSRSRESDARDDPAEMKARFEEAALLAQAEGRSSSTDWSSTAWSRPTSNYSTGAAAPAAAAAPGTNPSF-ASGLGGRQKSGGSXXXXXXGARQPDHYDLPVRPAQGGMATGLGAPARSXXXXXXXXXXGET------ASAAQRKQDVLVGRLVDMGFSRPQAEDALMKSGGDPDLAAEQLMTQGSEPAAGSNGRGGGGSR---AAPPIPPRA--NRGLPDNFSRQTENPVTTSASGTSRSTHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGGLADFLGSPAGXXXXXXXXXXXXXRARDEADRYGLFTTTTGAAAPAGRSRVAQSRSRYDTLFGEE 1803
            VFYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLC+AVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESPENMEALK AVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRF++VEELFVEDTSVVEKRR+LQAKKQRLLKGLETLMRMAPDLVATRPGGGA  ADD+ DS+ GLLQQ S  R +D RDDPA+MKAR EEAALLAQAEGRS+STDWSSTAWSRP +N         AAAA GT+ S+ A GLGGRQ     XXX   GARQPDHYDLPVRPAQGG A GLGAP+R                    ASAAQRKQDVLVGRLVDMGFSRPQAEDALMKSGGDPDLAAEQLMTQGS+ AA SNGR          APP+PPRA  NRGLPDNFSRQ+ +P T+++SG SRSTH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LADFLGSPA              R  +EADRYGLF  +TG AA  G SRVAQSRSRYD LFGEE
Sbjct:  461 VFYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCSAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESPENMEALKGAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFSEVEELFVEDTSVVEKRRSLQAKKQRLLKGLETLMRMAPDLVATRPGGGAGTADDYVDSSQGLLQQAS-GRGTDGRDDPAQMKARLEEAALLAQAEGRSTSTDWSSTAWSRPAAN---------AAAASGTSTSYGAGGLGGRQSXXXXXXXGAGGARQPDHYDLPVRPAQGGAAAGLGAPSRGPDPRRPVGGGXXXXXXXXXASAAQRKQDVLVGRLVDMGFSRPQAEDALMKSGGDPDLAAEQLMTQGSDAAA-SNGRXXXXXXXXXGAPPVPPRARTNRGLPDNFSRQSGHPATSTSSGASRSTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LADFLGSPAAGSSSVGGSGGAR-RVGEEADRYGLFPASTGGAAAGGGSRVAQSRSRYDALFGEE 1062
[Close]
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Match: A0A836CJ76_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ76_9STRA)

HSP 1 Score: 334 bits (857), Expect = 3.750e-102
Identity = 176/260 (67.69%), Postives = 203/260 (78.08%), Query Frame = 1 
Query:    1 VFYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCTAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESPENMEALKTAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFTDVEELFVEDTSVVEKRRALQAKKQRLLKGLETLM--------------------RMAPDLVATRPGG 720
            VFYGFM+QNVETWRPAVE CRSQ ANA L++ASLL++ LA+QFPRLC A+RDA++ LVEQLA+EVS RI+EIFQKESDPFTTNEGML+VINTIRFR FD A+E+A+  AGE P    AL   + E L  WYM+NHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVV+LLG  ESELFLL  R  +VEELFVED SV+E+RR LQAK+ RL +G+E+L                     RMAP++VA  P G
Sbjct:  433 VFYGFMVQNVETWRPAVEICRSQVANATLSIASLLIQALAVQFPRLCGAIRDAVSGLVEQLADEVSTRIEEIFQKESDPFTTNEGMLDVINTIRFRLFDVALEEALATAGEKPAESNALLATLRESLGAWYMKNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVRLLGLAESELFLLAARLENVEELFVEDASVMERRRTLQAKRDRLNRGMESLRSFLLALIAAVAVSCCCAHGDRMAPEVVAEPPPG 692
[Close]
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Match: A0A7S3UVE7_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVE7_HETAK)

HSP 1 Score: 209 bits (531), Expect = 7.880e-59
Identity = 111/244 (45.49%), Postives = 154/244 (63.11%), Query Frame = 1 
Query:    1 VFYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCTAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESPENMEALKTAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTN------RFTDVEELFVEDTSVVEKRRALQAKKQRLLKGLETLMRMAPDLVATRP 714
            VFYGFM QNV+TWRPAVE C  +   AA TVA+LL E L  QFP LC A+       + +L ++V   +D +F KES+PFTTNE ML++IN +RF+ FD A+ +A    G+     E +  AV+  +  +Y+  HGV    N  +M  LLQAYWN+AT+R++DNVCMT+E  FV +LL  +E+  FLL +          V +LFVED ++  +RRAL  K++RL + L+ + R APD+VA  P
Sbjct:   46 VFYGFMAQNVQTWRPAVERCCLRTFEAASTVAALLAEALVPQFPNLCRALTRLAEEAIGELQQDVLEEVDHLFAKESEPFTTNESMLDLINKLRFQKFDSALAEAFGRLGQGDRTAEQMAAAVLTGMGRFYLDAHGVAANGNPAEMAILLQAYWNIATRRVIDNVCMTLEATFVARLLALLENRTFLLGSGPGGEAEAGGVAQLFVEDEALARRRRALADKRERLERALDFVNRAAPDVVAAPP 289
[Close]
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Match: A0A8J2SEQ3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEQ3_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.830e-51
Identity = 111/250 (44.40%), Postives = 155/250 (62.00%), Query Frame = 1 
Query:    1 VFYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCTAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEA------GESPENMEALKTA-VMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTN-----RFTDV-EELFVEDTSVVEKRRALQAKKQRLLKGLETLMRMAPDLVATR 711
            VFYGFM++N+E WRP VE CR+Q     + V+  L+E LA  +P L + +R  + +++E+  + V  ++D++F KESDP+TTNE MLE++N IR ++FD A+   +D        G++ E   A   A V  KL +WYM  HGV T + VEDMCTLL+AYW+VATKRLVDNVCMT+E DF    L K+E   FL          TD+ E LF++D  VV++R+A   KK R+   L+ L      +VA R
Sbjct:  442 VFYGFMVKNIEEWRPFVEDCRAQYVATTIRVSDELLEALAPTYPSLVSEIRQLVTTILEEAGDRVQRKLDDVFAKESDPYTTNESMLELVNQIRMKNFDIALRSVLDSVPPSALVGDNEEKKSAAAAAHVKRKLGQWYMATHGVNTASKVEDMCTLLEAYWDVATKRLVDNVCMTLEHDFANFSLKKLEESCFLFAADAGVPEKTDLLERLFLQDPRVVQQRKAALEKKGRMEAALDALGESGLRVVAER 691
[Close]
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Match: A0A7S3NNK1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNK1_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.720e-46
Identity = 105/252 (41.67%), Postives = 147/252 (58.33%), Query Frame = 1 
Query:    1 VFYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCTAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESPENMEA--------LKTAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFT------DVEELFVEDTSVVEKRRALQAKKQRLLKGLETLMRMAPDLVATRP 714
            VFYGFM+QN+E WRP VE CR     AA  V+  L + LA  +P L   +R     ++++  + V+ ++D++F KESDP+TTNE MLE+IN IR ++F+ A++  +  A   P +M A         KT V  +L  WYM+ HGV T + VEDMCTLLQAYW+VATKRLVD                       L    ++      D++ LF ED ++VE RRA +AK++RL + LE + + APD+VA RP
Sbjct:  167 VFYGFMVQNIEQWRPWVEDCRQHYVAAARAVSDNLAQALAPTYPALAVEIRQRAHGIMDRYGDVVAEKLDDVFAKESDPYTTNESMLELINRIRQKNFELALKAVISSA--PPGSMMASNQNAKNTAKTHVKHQLGRWYMQTHGVNTTSKVEDMCTLLQAYWDVATKRLVDXXXXXXXXXXXXXXXXXXXXXXXLFAAEYSNPEKELDLQRLFREDPAIVELRRAAKAKEKRLTQALEAIKQFAPDVVAARP 416
[Close]
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Match: A0A6H5L1G4_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G4_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.080e-44
Identity = 162/220 (73.64%), Postives = 170/220 (77.27%), Query Frame = 1 
Query: 1165 AAQRKQDVLVGRLVDMGFSRPQAEDALMKSGGDPDLAAEQLMTQGSEPAAGSNGRGGGGSRAAPPIPP-------RANRGLPDNFSRQTENPVTTSASGTSRSTHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGGLADFLGSPAGXXXXXXXXXXXXXRARDEADRYGLFTTTTGAAAPAGRSRVAQSRSRYDTLFGEE 1803
            AAQRKQDVLVGRLVDMGFSRPQAEDALMKSGGDPDLAAEQLMTQGS+  A SNGR                    R NRGLPDNFSRQ+ +P T+++SG SRSTH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LADFLGSPAG XXX         R  DEADRYGLF ++TG AA  G SRVAQSRSRYD LFGEE
Sbjct:   32 AAQRKQDVLVGRLVDMGFSRPQAEDALMKSGGDPDLAAEQLMTQGSDTTA-SNGRXXXXXXXXXXXXXXXXXXRARTNRGLPDNFSRQSGHPATSTSSGASRSTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LADFLGSPAGGXXXVGGSGGAR-RVGDEADRYGLFPSSTGGAAAGGGSRVAQSRSRYDALFGEE 246
[Close]
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Match: D8LJA2_ECTSI (Mgm1 homolog, dynamin-related GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA2_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 3.560e-40
Identity = 97/263 (36.88%), Postives = 144/263 (54.75%), Query Frame = 1 
Query:    4 FYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCTAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESPEN------MEALKTAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFTDVEE-----------------------LFVEDTSVVEKRRALQAKKQRLLKGLETLMRMAPDLVA 705
            F+ FM+Q VE +RP VE+CR+   N+ L +A  LV  +A Q+PRL  A +  + S V  +AEE+   +D++F KE +PFT N+ ++E IN +RF  FD+ +   + EAG+ P N      +  LK  V   L +W+   HG    + VEDM T+LQAYW V +KR+VDN CM +E  F  +++ ++E++L  LT   T  E                        +F ED  +VEKR  L  ++QRL   L  +   APD++A
Sbjct:  455 FFIFMLQQVEKFRPVVETCRNLCCNSLLNIAVSLVSEVAPQYPRLQQAFQGIIESTVPNMAEELQPELDQLFDKEKNPFTENQDLVEAINQVRFERFDRVLHQVLVEAGDGPPNGGDASDVTPLKEWVTYNLGQWFRFAHGANPTSKVEDMSTILQAYWRVTSKRVVDNACMLLETSFFGQVVDRLETQLLALTQAITQEEGQDKAEAKAAAGQEGMGWQQPRLGIFNEDAVLVEKRSFLLMRQQRLKAALGKIENFAPDVLA 717
[Close]
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Match: A0A836CBT5_9STRA (Mgm1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT5_9STRA)

HSP 1 Score: 155 bits (391), Expect = 5.690e-36
Identity = 88/248 (35.48%), Postives = 140/248 (56.45%), Query Frame = 1 
Query:    4 FYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCTAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESP----------ENMEALKTAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFTDVEELFV---EDTSVVEKRRALQAKKQRLLKGLETLMRMAPDLVAT 708
            FY FM+Q VE +RPAVE+CRS+   + L V   L + +A Q+P L   ++  +   VE+  E +   +D +F KE +PFT N+ ++E IN +RF  FD+ ++  + EAG++P            + +L   V   L +WY  +HG    + VEDM  +LQAYW V +KR+ DN CM +E  F+  +   +E+ L L   +  D   L     ED ++VE+R  L++++ R+   L+ +  +APD+VAT
Sbjct:  451 FYIFMLQQVERFRPAVEACRSEIYASVLGVGRGLAQAIAPQYPLLVETMQSLVEQTVEEATEALLPELDMVFDKERNPFTENQDLVEAINRVRFERFDRVMQQVLLEAGDAPPPAEKGAPKGSELNSLHDWVSFNLGQWYRYSHGANPTSKVEDMSAILQAYWRVTSKRVCDNACMLLEASFLAAVPDALEAAL-LSHAQTLDARALAAALQEDAAIVERRALLESRRDRVAAALDRIAAVAPDVVAT 697
[Close]
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Match: A0A7S2W2A1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2A1_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.080e-34
Identity = 87/241 (36.10%), Postives = 141/241 (58.51%), Query Frame = 1 
Query:    4 FYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCTAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMD----EAGESP-ENMEALKTAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFTD--VEELFVEDTSVVEKRRALQAKKQRLLKGLETLMRMAPDLVA 705
            FY FM+  +E WR  V++ +++  +  L V++ +   L  Q+P +   V   +    E+    V  RIDE F++E+DPF +N+ +   I  +R   FDKA+E AM     +AG+   ++M+ L+  +++KL  WYM NHGV + + +EDM T+L AYW +++KRL +N CM+ E   + +L   +ESEL        +  V+ELF E   +VE+R  L+ KK R    ++++ R+APDLVA
Sbjct:  434 FYSFMVTKIEDWRAPVDTLKNEVFDLILAVSTSIFTLLCPQYPEIGKLVSMVVQGWAERHMVAVERRIDEAFKQEADPFVSNDDLGIEIIRVRGERFDKAIERAMKLASTDAGDGTIKDMDKLEARILDKLGFWYMANHGVSSASLIEDMLTVLMAYWALSSKRLTENTCMSFEAHVLQRLSEDIESELLTAVQTQPEDVVKELFNEPKHMVERRTLLKTKKARFDSAMDSITRLAPDLVA 674
[Close]
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Match: A0A6V2RT65_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RT65_HETAK)

HSP 1 Score: 147 bits (371), Expect = 1.280e-33
Identity = 75/220 (34.09%), Postives = 127/220 (57.73%), Query Frame = 1 
Query:    4 FYGFMIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCTAVRDALASLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDAMDEAGESPENMEALKTAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWNVATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFTDVEELFVEDTSVVEKRRALQAKKQRLLK 663
            FY FM Q +E WR   +   S+  +  L VAS L E +A+Q+P L   V+   A ++E+   +    +DE+  +E DPFT N+ + + +N IR+  F+ AV  A + A  +   +E++K    ++L  WY   HGV + +N EDM  +L+AYW +A++R VDNVCM +++  +  L G+++ E ++  +    +   F ED  +  +RR L +K++RL+K
Sbjct:  438 FYMFMAQYLEQWRGPAKVAVSEMRSLCLEVASKLTEIIAVQYPALREGVKKVAAVVLEETMTKALDLVDELLDREKDPFTANDFLAQHVNKIRYDRFELAVVRAFETAAATGTGIESVKQGAAQELQRWYRETHGVNSSSNAEDMSAILEAYWTLASRRFVDNVCMGIDRTMLNSLAGRIQEECYMFVHDEEKLAAFFEEDARLAHRRRELLSKQERLMK 657
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4899.12825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR39_ECTSI8.260e-26180.16Mx1, Mx-like dynamin-related GTPase n=1 Tax=Ectoca... [more]
A0A836CJ76_9STRA3.750e-10267.69P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3UVE7_HETAK7.880e-5945.49Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
A0A8J2SEQ3_9STRA3.830e-5144.40Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3NNK1_9STRA1.720e-4641.67Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6H5L1G4_9PHAE1.080e-4473.64UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJA2_ECTSI3.560e-4036.88Mgm1 homolog, dynamin-related GTPase n=2 Tax=Ectoc... [more]
A0A836CBT5_9STRA5.690e-3635.48Mgm1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2W2A1_9STRA2.080e-3436.10Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6V2RT65_HETAK1.280e-3334.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4899contigL-elsbetiae_contig4899:2830..12947 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score753.4
Seed ortholog evalue7.8e-215
Seed eggNOG ortholog2880.D7FR39
KEGG koko:K20291
Hectar predicted targeting categoryother localisation
EggNOG free text desc.mitochondrial fission
EggNOG OGsCOG0699@1,KOG0446@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons12
Model size1803
Cds size1788
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816484.1212819-UTR-L-elsbetiae_contig4899:2829..28441622816484.1212819-UTR-L-elsbetiae_contig4899:2829..2844Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig4899 2830..2844 +
1691683592.8201356-UTR-L-elsbetiae_contig4899:2829..28441691683592.8201356-UTR-L-elsbetiae_contig4899:2829..2844Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig4899 2830..2844 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816484.1362555-CDS-L-elsbetiae_contig4899:2844..30321622816484.1362555-CDS-L-elsbetiae_contig4899:2844..3032Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 2845..3032 +
1691683592.8366156-CDS-L-elsbetiae_contig4899:2844..30321691683592.8366156-CDS-L-elsbetiae_contig4899:2844..3032Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 2845..3032 +
1622816484.146876-CDS-L-elsbetiae_contig4899:3527..36331622816484.146876-CDS-L-elsbetiae_contig4899:3527..3633Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 3528..3633 +
1691683592.8514485-CDS-L-elsbetiae_contig4899:3527..36331691683592.8514485-CDS-L-elsbetiae_contig4899:3527..3633Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 3528..3633 +
1622816484.1567254-CDS-L-elsbetiae_contig4899:4102..42461622816484.1567254-CDS-L-elsbetiae_contig4899:4102..4246Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 4103..4246 +
1691683592.8631616-CDS-L-elsbetiae_contig4899:4102..42461691683592.8631616-CDS-L-elsbetiae_contig4899:4102..4246Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 4103..4246 +
1622816484.170727-CDS-L-elsbetiae_contig4899:5656..58061622816484.170727-CDS-L-elsbetiae_contig4899:5656..5806Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 5657..5806 +
1691683592.8780992-CDS-L-elsbetiae_contig4899:5656..58061691683592.8780992-CDS-L-elsbetiae_contig4899:5656..5806Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 5657..5806 +
1622816484.1831033-CDS-L-elsbetiae_contig4899:6377..65531622816484.1831033-CDS-L-elsbetiae_contig4899:6377..6553Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 6378..6553 +
1691683592.8890169-CDS-L-elsbetiae_contig4899:6377..65531691683592.8890169-CDS-L-elsbetiae_contig4899:6377..6553Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 6378..6553 +
1622816484.193449-CDS-L-elsbetiae_contig4899:7408..74811622816484.193449-CDS-L-elsbetiae_contig4899:7408..7481Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 7409..7481 +
1691683592.8979964-CDS-L-elsbetiae_contig4899:7408..74811691683592.8979964-CDS-L-elsbetiae_contig4899:7408..7481Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 7409..7481 +
1622816484.2059288-CDS-L-elsbetiae_contig4899:8811..89211622816484.2059288-CDS-L-elsbetiae_contig4899:8811..8921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 8812..8921 +
1691683592.9086585-CDS-L-elsbetiae_contig4899:8811..89211691683592.9086585-CDS-L-elsbetiae_contig4899:8811..8921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 8812..8921 +
1622816484.218755-CDS-L-elsbetiae_contig4899:9412..95721622816484.218755-CDS-L-elsbetiae_contig4899:9412..9572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 9413..9572 +
1691683592.9204555-CDS-L-elsbetiae_contig4899:9412..95721691683592.9204555-CDS-L-elsbetiae_contig4899:9412..9572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 9413..9572 +
1622816484.2305987-CDS-L-elsbetiae_contig4899:10836..108991622816484.2305987-CDS-L-elsbetiae_contig4899:10836..10899Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 10837..10899 +
1691683592.9301944-CDS-L-elsbetiae_contig4899:10836..108991691683592.9301944-CDS-L-elsbetiae_contig4899:10836..10899Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 10837..10899 +
1622816484.2507017-CDS-L-elsbetiae_contig4899:11328..114391622816484.2507017-CDS-L-elsbetiae_contig4899:11328..11439Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 11329..11439 +
1691683592.938594-CDS-L-elsbetiae_contig4899:11328..114391691683592.938594-CDS-L-elsbetiae_contig4899:11328..11439Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 11329..11439 +
1622816484.2621908-CDS-L-elsbetiae_contig4899:11901..120531622816484.2621908-CDS-L-elsbetiae_contig4899:11901..12053Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 11902..12053 +
1691683592.94757-CDS-L-elsbetiae_contig4899:11901..120531691683592.94757-CDS-L-elsbetiae_contig4899:11901..12053Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 11902..12053 +
1622816484.273789-CDS-L-elsbetiae_contig4899:12592..129471622816484.273789-CDS-L-elsbetiae_contig4899:12592..12947Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 12593..12947 +
1691683592.9586322-CDS-L-elsbetiae_contig4899:12592..129471691683592.9586322-CDS-L-elsbetiae_contig4899:12592..12947Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4899 12593..12947 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4899.12825.1prot_L-elsbetiae_contig4899.12825.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig4899 2845..12947 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig4899.12825.1

>prot_L-elsbetiae_contig4899.12825.1 ID=prot_L-elsbetiae_contig4899.12825.1|Name=mRNA_L-elsbetiae_contig4899.12825.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=596bp
MIQNVETWRPAVESCRSQAANAALTVASLLVETLALQFPRLCTAVRDALA
SLVEQLAEEVSVRIDEIFQKESDPFTTNEGMLEVINTIRFRHFDKAVEDA
MDEAGESPENMEALKTAVMEKLSEWYMRNHGVGTMANVEDMCTLLQAYWN
VATKRLVDNVCMTMEQDFVVKLLGKVESELFLLTNRFTDVEELFVEDTSV
VEKRRALQAKKQRLLKGLETLMRMAPDLVATRPGGGAADDWTDSAHGLLQ
QGSRSRESDARDDPAEMKARFEEAALLAQAEGRSSSTDWSSTAWSRPTSN
YSTGAAAPAAAAAPGTNPSFASGLGGRQKSGGSSGGGSGGARQPDHYDLP
VRPAQGGMATGLGAPARSASGGRSRGGGGETASAAQRKQDVLVGRLVDMG
FSRPQAEDALMKSGGDPDLAAEQLMTQGSEPAAGSNGRGGGGSRAAPPIP
PRANRGLPDNFSRQTENPVTTSASGTSRSTHFFGGGGGGGASATAAPATA
RGSSSQSPPQSASMRRAVGGVGNNSNNDIDGGLADFLGSPAGSSTSGGGG
GGGGRRARDEADRYGLFTTTTGAAAPAGRSRVAQSRSRYDTLFGEE
back to top

mRNA from alignment at L-elsbetiae_contig4899:2830..12947+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig4899.12825.1 ID=mRNA_L-elsbetiae_contig4899.12825.1|Name=mRNA_L-elsbetiae_contig4899.12825.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10118bp|location=Sequence derived from alignment at L-elsbetiae_contig4899:2830..12947+ (Laminarionema elsbetiae ELsaHSoW15)
GTGTTCTACGGTTTCATGATCCAGAACGTGGAGACTTGGCGGCCCGCGGT
GGAGTCCTGCCGGTCCCAGGCCGCCAACGCTGCTCTCACCGTGGCCTCCT
TGTTAGTGGAAACCCTGGCTCTCCAGTTCCCCCGCTTGTGCACCGCAGTG
AGGGATGCCCTGGCGTCGCTGGTGGAGCAGTTGGCGGAGGAGGTCAGCGT
GAGGTGAGTTGTTGTTGGTGGTGGTGGTGGTGTTGGTGTTATGGTAGTGG
TACGTGGTGGTTGTGGGCGTGGGTTGCGGCTGTTCAGGTGCGGTCGGGCT
TATTCGTCGCTCTGCCTCTGCTGTGGTTGCGGGTGGCCCAGGGGTGCTGC
GCGCGCGCGCCGCAGCTGTCAGAACAGCTATATACTGCATGAGGGAGGAA
AAGATGGGTATGTAGTATATATCTGTGTTCTCGAGTTCTCGACAAGTTGT
CGCCTGAATAGTTGTGCGTTGTGTCTACTGTTGCATTGGGTGGAGACTCC
CTGATGCTGCATTGTTGTGTGTGTGTGTGTGTGCTTTTTATTCGATATTG
TTCCGTCCACCGCGCGCACCACTCCTGTGTTGATGATGTTGCTGATGTGC
CCTTTTATTTACCTACTGCCCTGTTCTGGTGTGTGCCTCGTGGTGGTGGC
GGCGGCGGCGGCGGGGGGTGATTGTATGTGCGTTTTGGCAATGCTCAGGA
TCGACGAGATCTTCCAGAAGGAGTCTGACCCTTTCACGACCAACGAGGGG
ATGTTGGAGGTGATCAACACCATCCGCTTCAGGCACTTCGACAAGGCTGT
CGAGGTAAGTAAGCCAGGGGCGGGGAGGGCGCACCTCCTGTGGCGTAAAC
GTTTGGTACGAGGGTCGGTGTCAAGGCTGAATTGATTGAATATCATATTT
GAAACATTTTTTTTGTTACGGATTGTGTGAAAATATGATGCTTTTAGGCT
CGGGGGTTGGCGTTGTTCTTGTGCTTATTGTACTAAATACTTCGTATGGT
ATATAATAACGATGCGTGCGGTGGGTGCTGTTTGCAGTGGCATATAATTG
GTGTGTCCAGTCGACGAGAGGGGAGGCAATGCTAATGTTTTTGCTTTTAC
GACACTGCTGCCTGCTGCTGCTGCTCTGCTGTCATGTGGACGATTGTGTC
GTGGACCGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGACGCGTC
GTGGTTTGTGGTTCGTTGTTTGTCGTTTCTTGCCTTGTTGTCGTTGTTGT
TGCTGTTGCATCAATAAAAACAGGATGCCATGGACGAGGCCGGCGAGTCG
CCCGAGAACATGGAGGCCCTGAAGACAGCCGTCATGGAGAAGCTCAGCGA
GTGGTACATGCGCAACCACGGGGTGGGGACCATGGCCAACGTCGAGGACA
TGTGCACGCTTCTACAGGTAATGTATTGTGCCTGTGGGGGTGGTATACCG
TAGGTGACACAAGATGCCACACCCCCTGGGCCAAATTTCAGAGCTCCATT
ACTCCGTAACGAAGAAGGTGCCAGCACCGTACGACACGTTTTCGGACAGC
TCTCGTTTAGATCTTTCCAACGCCACCCCTTTCGGCACTGGGACTCTTCT
TGCTGGGGAGGAATCGATCTTTGAAAATGTGTCCAGGGGGTGGGGTGTGG
TATCTTGTGTCACCTACGGTACCATTCGGCCCGCTCTCTAGCCCACCCGG
AGGGTTTCGCGGCATCGGCATCCTTTGGGGGTGTTCGGCTTTTGTTCGTG
TTTTTTTTTCGTTTTTTTTTTTCTGTTCGCGTGTGTGTGTGTGTGTGTTT
TCATTCCATTTTTTGTCGTTGTTTGCTGTATGCACAGGCTTTCCTGCAAT
AGAACCAACCCCCAATTCTCAAAAAGAGCTGTGGGGGCAGCGCGCGCGGG
GGGGGGGTTATCTAGGAAATAGAGTGGAAGATCCCCCACAGTAGTGCCAC
TTTTTCAGAACTGGGGGCCCTGCTGCAGGAAGCCTATAATGTACATACCC
CCGTTGTTGTTGTTTTTTTTGCATGCTTGTTGGTATATGATGGCGTGCGC
ACGTGTGGACGCTCTTTTGCGAGGGCGGGCGGGTGAGGTGGGATGAAGCG
AGGTACATTTTTCGGCCTGTTACGTTTTGCCGTGTTCGGCCGGAACAAAC
ATAACAGGCAGGTAACATAACAAACATAAGGAGGTCTCCCCCCCCCCCCC
CCCCCCCCCCCCTGGGCCCCCCCGCTGGGCGCCTCTGCCCTCCCCGGGGG
GGGAGGGGGGGCCGGGGGGGGAGGGGGCAGANNNNNNNNNAAAAAAAAAG
GGGGGGAACAAAACAAAAAAAAGGGGGGCCCCCCCCCCCCCCCCCCCCCC
CTCCTGTGTGACCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGGAGGAAGG
GGGCCAGTGGGGTAGACGACGAATAAGCCAATAATGGGAGGGAAAAAATG
ACGTCGGTGGGTACACCCACGTGTTGCTCTCCCGTCGTCTTCTTTTTGTC
TCAACGAACGCCATTGCTGTTGGCATCCCATCATCAAGCCCGCAACCGAA
GGGGTCCAATCATGTTCTGCCATCGATATACACGTATTTATTGGTATGTA
TATACTTTCGGAATCAGTCAAAAAAAAATTGTTATTCCTTGTGGTGTTGA
GTTCGAGGCACCAAATGCTTTTATGTGTCAGCCATCCGACGAGTTCAAGT
GCTCAAACAAATACTCCTTCTACATACCTGTAACTACAATATTTACTCCT
TTTTTATTTCTCTCTCGGCATCATTTTCCCCACGGCCCGCCGGCGTTTTG
ATGGAAAACGGCGGCAAACCAACGCAGGCGTACTGGAACGTGGCGACCAA
GCGATTGGTGGACAACGTGTGCATGACGATGGAGCAAGACTTCGTTGTCA
AGCTGCTCGGGAAGGTGGAGTCGGAGCTGTTCCTGCTCACGAACCGTTTC
ACCGACGTGGAAGAGCTCTTCGTCGAGGTATGTTGTACCGGTACATCCAT
ATCATACTAAATAGCATTGCAAAAATACATAGAAGTACATATATACCCTA
CGCGGATAGACTATGTATCTAGACTAGAAGTATGTAAGTAGCTTTTTTTT
TTGTTCCTTAACTCCAGTCATATACCTTTTGTGAGGGTACACACAGTTTT
TGTTTATGGAGGTTATGTGTAGGAGTATTGTTGTTCAGTGAAAGTATATA
CAAGAAAACCGGGGTTACTTTTTTTCTGCGAGGTAATTTGTTGTTTCTTT
CACATTAAAACTGTTCCGATATTTCCACCCAGCCTCTAGATGTCCCTACA
CTATTCCAACACTTGATGCGGTCAATTCCCGTGGTCACTAGCTTATACCC
AAGAGGCATATATGATATGTACTTCTTTGTGTGCACTTCTTTTGTGTTTG
TACATGGTTGTATGGAAAAAATTATTCTCTTCCTTTGAATTCTGCCAAGT
GCAAATTTGTTCTCGCGAACCAAATCCCAAAACGCGCGTGCACATGTACG
TACATGCCTGTTTGTGTAAAAATGCGCCCCCCAACACACTGCATGCAGGA
CACGAGCGTGGTGGAGAAACGGCGCGCGCTGCAGGCCAAGAAGCAGCGCC
TGCTCAAGGGCTTGGAAACCCTGATGCGGATGGCCCCCGACCTCGTGGCG
ACACGGCCGGGCGGGGGAGCGGCGGACGATTGGACGGACAGTGCGCACGG
GCTCTTGCAGCAGGGCTCGAGGAGGTGCGGCAAAACATGCCATCCATGTA
CATCTGTATGCACATGGGTGTAAAGGGGGGTCCCGTGCTTGTGTTTTATG
TCTGCAGAGCGAGGAGGGGGGGGGGTGTTGAGGCGGGCCTACGTCATTTG
TATTCGCAGTCAAAAGTCGCCCAAAAGCACTGAGACAGGGAGATAGGTAT
TATACCGTATAACTACGTACATATCCCCCCCCCCCGTTTTGTGCGGGATT
GGGGGCTTGTGTGACGCACTTATTACCAGCGTTTGAGACCTGCCGGCGCT
CGTATACAGTTGCGAGTGTGTTTTTTTCATTTTTTTTCTTGTCTTGTGTG
TGCAATCAGAGAAAAAGAGTGTGCGACGAAGGTATATGACTTCCCATCGG
TCGGTTCGGCGTCGAGACGGACGTTTTTGTGCAAGGCGGCGAAAAGGAGT
TGATTTTTATTTTTTCTTCCTCCCTCCGTTTTGCTCTGCTGCGGGTCAAA
ATCAACCTCTGCATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCTCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCTCCTNNNNNNNN
NNGGGGGAAAGGGTGTTTTTTTTTTTTTTTTTCCCCCCCCCCCTTTTTTT
TGCCGCGGGGGTCAAAAACACCCCCCCCCCCCCCCCCCCCCCCCCCCCTC
CTTTGTCTGTCCCTCTCTCTTGTCCTCGCCCGCCCGCCCGCTGTTCTCTT
TCCTTGTTCGGCCTCCTTCGCTCCCGTGCGCGCGGCTCTTTGCCGACGGA
CGACCTGCTCTTCGTGGTGGTTGGGCGGTGCAAATACGTTTGTACCGGTG
GATCTGCTTGGCTCTCTTCCCCTTTGGAGCAGGGAGTCTGACGCACGAGA
CGACCCCGCGGAGATGAAGGCTCGCTTTGAGGAAGCAGCGCTGTTGGCTC
AGGTGTGTGTATACATATATATATATGTATGTTTTTTTTTTCGTGGTTGT
TTTTCCCTCCCATTATTGGCTTGTTTATTCGTCGTCTGCCGCACTGGCCC
CCCGTGTTCCACTACTACGACTAGCTACACGACCGTGAAGTATGTATCTA
GTTGCTAGTTGCACCACGATATGTTTACCGAAACGTGTATCGTATTGCAA
TACACCGAAGCGTGTAGCACACCTGAAGGAGGTGGATAGACGCAACACCA
AATGGGACGTTAGGAGGGGGACAGACGCAAAAACACACACACACACACAC
ACAGACAGACACACTGTTGTTGTTGTTGTTGTTCTCTTCACATGAGCGCG
TATAGTGGGAGTTGCTACAATCATCCCCAAAAAATGTAGCAACTGACGGC
TCGTGGTCACCAAAGTGCTGGGGCCATGGAAATATCCTAAAGAAACACAC
GCAGGTATGAAAGGCGCACGCACACACATGTGTATAGTGTATACAAGTAC
AAATGTATGCTGCCTTAAGCTTTTTGGGGGACTGTTTTCTTTTTTTACAC
GCACGCTCGCTCGCACGCTCGCAACGTTCAGGCTCTCTGCCTGCGGGGAA
AGCCTCGGCACCCGCTGCGCTCACCTGCTTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTAATATACTTCTATGTATATATCTCCA
GGCTGTGGCATCCACGCTGTACTTGATGCCATCTTAGTGTTTTGTGGTAC
TGCTTGTTGTACGTAATTGTGTTCGCACAGCATGCTCCGCCCTGCCAGAC
AACACTTTGTAGTGAAGGGCGGCTGAACTCTTCGTACGGGAAGACTAGGA
GTATTTATGTTGGCTGGCTCAGCCTTCCTTCTTATGTAGCTCGAAAACAA
AGTTTGGCAAAACTCAACGGAACCCGACACGTTGCCTTCAGAGAGCACTA
GCCCTCCACTCCACTGCCCTACACGAACCCCCCAACAGCAGCAGCAGCAG
CAGCGGCGGCGGCGGCGGCGGCGGTGAGTAGGACAGCAGGGCAGCCATAT
CACCCGGGTTACAGGGGGCTCCGTAACGCACTTCTGGCGCAACATAAGGC
CGTACCGTATCCCCCCCCCCAACAAGAGATGGCGAAAAGTCGAGCCTGTT
CGGTTGACCTCATGCCAAGAATCACACCTCGCTCCGCAAACGCGAAGATA
CGGGCACCCCTGCCGATTTCACACGCAACACTCAAAGCTCGCGCTCAACG
CCCCCCGACCGCCCGCCCGCCTCTGTCCGACAACGACGACGACAACGACG
ACGCCACACAACACAACACAACAAACAACCAGGCGGAGGGCAGGTCTTCC
AGCACTGATTGGAGCAGCACTGCCTGGAGCCGGCCGACGTCGAACTACTC
CACCGGCGCTGCCGCCCCCGCCGCCGCCGCCGCCCCAGGCACGTGCGCGT
GCGCGTGCTGTGTTTTTGCTTTTCGCGGAGCGGCTGTGTATTTAGCGCTT
TTTATTTTGTGGACATGTATTTATCGCGTTGGTTTGTGATGCACGTTTCC
CGCTTCGAGCTCTTTGCAACTCAAGATTGTGTGTGTGTGTGTGTGTGTGT
GTGTATGTTTTTAATTCCCCTTTCCGCTCCCGATATAAATAGCAGGGAGG
TTTAGCATGTATGTAGAACAAGACACGGGGGCTCCGGTTTGGTTACTACC
CCTCGCCGAGTGCATGGCCGCCGCAGCCTGTGACGTTCCTTGCATATTAA
GAAGACTCAAACCAGGTATCCTCAGTTGACTTTCCCCTCTCCCTTTGTTG
AGGGCGTGTTTTGTCTCTCTTTTGTCTGCCTGTCCGTCTCCTTACAGCAT
CCCCCCCCCCCTGCCCCCCTGCCCCCCGGCCCCCCGATCCTTAAATCTGC
TTTCGGTGTGTACTCAAACGCTGCAGGCACTAGCAACCCTTCCTTTGCTT
CGGGTTTAGGCGGCCGGCAGAAGTCCGGTGGAAGCAGCGGCGGCGGTAGC
GGCGGCGCGAGGCAGCCCGACCACTACGACCTCCCGGTGAGGCCAGCTCA
GGGCGGCATGGCGACGGGACTGGGGGCACCTGCACGCTCGGCGGTGAGAG
AGAGGTTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGTTTTTCCTCCGT
CTATGAGATGAGGGGTTTGTTGCTGCTACTCTGTTTTTCCTCTCTCTATC
TACTCTTATCTATGTACGTGTCTTGTCTTGTCTACCTTTCTTGTTCGTTT
GTTGCTTTTTTTTGTTACATACATACGTGTTTTTTTTCTCCCTACTGTGT
GGACTTTTTTGCACCGACCTCGCTACGTAGCCGGCTGAGCCGTGGAAGTT
CGAAAAGGAGCACACGGACAGAAACAAAAAACACTCCACTGCGTTTACTA
CGCAGCGACCAAAATGCTGCGCTGCTTCTAGAATTTGCTCGGACCCTTGT
CCGAGCGCTGGTTAACGTGTGGGTATCCATCCGTAAGAACCAAAAAACAA
GAAAAAAAAGCCTTCGCGGACGTAAACACACACGGAACGAACCGTTTTGA
AAGAAAAACAGTCAAATCTAAAATGGAACCTAACCCACATTGAGACGGGA
CTCCGTGAGATTCAATCGGTACATATTCCATATACATAGTGACGTAATAT
TGGGCCGGCCCGAATAGAAAACTACCTAAAATATAAAGAAGAATTCAACA
TCTCCCAAGCATCTCTGCCAGGTCAACTTTTTCTTCACACGACCCGGTAC
TACCTTAACTGCACCAGGGACCCCACCCTACCGTTATACTGGCCCTGCTA
AATAGCTGTAGGATTTTTTGTTTCCTTCTTCACATTTATTTCCAGTGGTC
GATGGGCTCTCTGTCACGAGGACGTCTTGCCAGAGTACTGAACCGTGGTC
ACACAGAAGGGTTACTTTCCCCAAGGCCCCCACCCCCCCCCGTCTGCGGT
GCTTGCCTAAGATTTTTTGTCGCGAGAAGGGTTCTGCCGTCCCTTTCCCT
CGTCGACTGTGAGGTCGAAGTTAGGATTGCTGACTGCTTTTTTTTTTTAT
CAGAAGGCGAAACCAAAACGATGTGTAGTATTGTAGAGGCATGATTCGCC
CGCCTCTCGGGGCTGTGGCTTTTGAGTCTTGCCGAGGATGGATTCGAGGG
TCTACTACAAAATGTTGTGACCGTATTTATTGTAATATTTTTCCCTTGAG
TCTTTCCTTTCTTGACGGAGAACGCCAAGGCGAGAGTGTTGACTGTTGAG
AATCGTTCCTAAACCAACTCTCCCTTTTATCTCTTTGGCTTGTGCGCGTG
TCTCCGTTTTATGTATGTATTTGCGAAAATCTGACGGCCCCACAGCAGGA
ATCCAAGAGCGGGGGGCGTAGCCGCGGGGGTGGAGGCGAAACCGCGAGTG
CGGCGCAGCGGAAGCAAGACGTGAGTGAGAAAGCACAATAATAAGGGTGG
AGCGGGGGAGGTAATGCAGTCGAAACGAGAGCGTAGATGACCGTAGACGA
ACGTCGCACCCTCATACAGCGTGTGACCCCGGTTGCGTCGTCTAGGTAGA
CGTAGTGGAGGAAGGGGGCCGGTGGGGCAGACGACGAATATGCCAATAAT
GGGAAGAAAAACAAACACAAAAAAACAGCAATTCGGGAGGGCCAAAGGGG
GCGGGGGAGGCAGAAATATACTGACAAAGAGTGCATGAAAGTTAGTTATC
GCGCGGCAAAACGTTTGTCCGATGTATTTCCTCGCTCCACGTTATTTTGT
GAGCGACGTGTTTCGGCAGGCTCGCATTACTTCACTCGGCGGATGGATGT
CCGTGCGCTTTGTTTATTGCCCCGGTTTTTTTTTTTTTGTCTCGCGTAGG
TTCTCGTGGGTAGGCTGGTAGACATGGGCTTTTCCAGGCCTCAGGCGGAG
GACGCCCTGATGAAGAGCGGGGGCGACCCGGATTTGGCGGCTGAGCAGCT
GATGACGCAGGTGTGTGTGTGTGCGTGCGCGTGTTACATGGGAGTACAAA
CTTGTTGGGCCGTTTTTTTTTCTTTCTCTTGTGGCCGCCTCGGAATCATT
GCGGGCAGGGCACTACTCACTCTCTTGAAAAACAATTCCGGGCCCCCTCA
AAAACAACCCGTTGTCGTGGCCGTGCGATGCAGTTACGATAGTGGAACCG
AACCGTCATATGCCGCTTGATCGCCCCTGTTGCTGCCGTTAAATACCGCT
CGAATCAAAACTGTGTGCGTGCGTGATATCGAGCCTGAGTCAACAGCTCA
TAGTACCTCCCGTCCTCTCGAAGGGGGGGCGGGGGCGCCCCGCGCGGCGA
ATTGGCCGAAAAACCCCATGTCCGAGAAAAAGCGAGCACCAACTTCAGCA
CCCCGCCCCTCTCCTCCCTTTTCCTCCCTCGACTCATCCAATCCTTGCTC
TCGGCCGGTGACGCAACCACAGGGGTCTGAGCCTGCGGCCGGCAGCAACG
GCAGGGGTGGCGGTGGGTCGCGAGCGGCCCCGCCGATCCCTCCCAGGGCG
AATCGTGGCCTGCCGGACAACTTCTCCCGGCAGACCGAGAACCCGGTGAC
TACTTCCGCCTCGGGAACGAGCAGGTATGTACGTATGCAGTCCCCGATCA
AAAGACCCTCCCATGATGGGGGGGGTGGGGCGTGGGTAGGTAGGTTTGTT
TCTTGTGTTCGTGCTTCCAAGGCGGGCTCGATAGCGCTTCGTATCTAGCA
CAGGATAGGTGTGACAGAAAGGGGAGAGCCGGGGGGTGAGTTAAGAGTCA
TGTTGGTCTGTATCATCGCTCTCGCCATTTGGCCCCCGACACCGCTCGAT
ATCACGGATCTGCGGTCGCGACGACGAGGGTTTCATGTTAATACGAATAG
TACCTTTCGCGCGCCCCCGGAACACCGAGAGAGAGAGAGCCTTTGTTTTC
GCTCGCTGGTGGAAACGCAGTACATATGTTCAGGAAGACAGAGCCCCATC
GAACTCAACACTTCTCTCTCTCACTCTGTCCGACGAAACCGTTGCGTGGT
GAAAGACCACCGGCGGACGTAAGCAGGAGGCAATTTATGCCCCTCCCCCG
CCCCTCCCCCGTTTTCCTCCCCGTTCCCCTTCCCGTTCCACTTCCCCTAA
AAACGATCGAAAGGTCCACCCACTTCTTCGGGGGCGGCGGCGGCGGCGGA
GCGTCAGCAACCGCAGCGCCCGCCACCGCAAGGGGCAGCAGCAGCCAGTC
CCCTCCGCAGTCAGCCTCGATGCGTCGGGCGGTAGGAGGAGTCGGAAACA
ACAGCAACAACGATATCGACGGAGGGCTTGCCGACTTTTTGGGGTCCCCC
GCGGGGTCCTCGACGAGCGGCGGCGGCGGTGGCGGCGGCGGGCGGAGAGC
GCGGGACGAGGCCGACCGGTACGGGCTGTTCACAACGACCACCGGGGCGG
CGGCGCCCGCAGGGAGGTCTCGCGTGGCGCAGTCGAGGTCGCGGTATGAC
ACGCTGTTCGGGGAAGAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig4899:2830..12947+

>mRNA_L-elsbetiae_contig4899.12825.1 ID=mRNA_L-elsbetiae_contig4899.12825.1|Name=mRNA_L-elsbetiae_contig4899.12825.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3576bp|location=Sequence derived from alignment at L-elsbetiae_contig4899:2830..12947+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATCCAGAACGTGGAGACTTGGCGGCCCGCGGTGGAGTCCTGCCGGTC
CCAGGCCGCCAACGCTGCTCTCACCGTGGCCTCCTTGTTAGTGGAAACCC
TGGCTCTCCAGTTCCCCCGCTTGTGCACCGCAGTGAGGGATGCCCTGGCG
TCGCTGGTGGAGCAGTTGGCGGAGGAGGTCAGCGTGAGATGATCCAGAAC
GTGGAGACTTGGCGGCCCGCGGTGGAGTCCTGCCGGTCCCAGGCCGCCAA
CGCTGCTCTCACCGTGGCCTCCTTGTTAGTGGAAACCCTGGCTCTCCAGT
TCCCCCGCTTGTGCACCGCAGTGAGGGATGCCCTGGCGTCGCTGGTGGAG
CAGTTGGCGGAGGAGGTCAGCGTGAGGATCGACGAGATCTTCCAGAAGGA
GTCTGACCCTTTCACGACCAACGAGGGGATGTTGGAGGTGATCAACACCA
TCCGCTTCAGGCACTTCGACAAGGCTGTCGAGGATCGACGAGATCTTCCA
GAAGGAGTCTGACCCTTTCACGACCAACGAGGGGATGTTGGAGGTGATCA
ACACCATCCGCTTCAGGCACTTCGACAAGGCTGTCGAGGATGCCATGGAC
GAGGCCGGCGAGTCGCCCGAGAACATGGAGGCCCTGAAGACAGCCGTCAT
GGAGAAGCTCAGCGAGTGGTACATGCGCAACCACGGGGTGGGGACCATGG
CCAACGTCGAGGACATGTGCACGCTTCTACAGGATGCCATGGACGAGGCC
GGCGAGTCGCCCGAGAACATGGAGGCCCTGAAGACAGCCGTCATGGAGAA
GCTCAGCGAGTGGTACATGCGCAACCACGGGGTGGGGACCATGGCCAACG
TCGAGGACATGTGCACGCTTCTACAGGCGTACTGGAACGTGGCGACCAAG
CGATTGGTGGACAACGTGTGCATGACGATGGAGCAAGACTTCGTTGTCAA
GCTGCTCGGGAAGGTGGAGTCGGAGCTGTTCCTGCTCACGAACCGTTTCA
CCGACGTGGAAGAGCTCTTCGTCGAGGCGTACTGGAACGTGGCGACCAAG
CGATTGGTGGACAACGTGTGCATGACGATGGAGCAAGACTTCGTTGTCAA
GCTGCTCGGGAAGGTGGAGTCGGAGCTGTTCCTGCTCACGAACCGTTTCA
CCGACGTGGAAGAGCTCTTCGTCGAGGACACGAGCGTGGTGGAGAAACGG
CGCGCGCTGCAGGCCAAGAAGCAGCGCCTGCTCAAGGGCTTGGAAACCCT
GATGCGGATGGCCCCCGACCTCGTGGCGACACGGCCGGGCGGGGGAGCGG
CGGACGATTGGACGGACAGTGCGCACGGGCTCTTGCAGCAGGGCTCGAGG
AGGACACGAGCGTGGTGGAGAAACGGCGCGCGCTGCAGGCCAAGAAGCAG
CGCCTGCTCAAGGGCTTGGAAACCCTGATGCGGATGGCCCCCGACCTCGT
GGCGACACGGCCGGGCGGGGGAGCGGCGGACGATTGGACGGACAGTGCGC
ACGGGCTCTTGCAGCAGGGCTCGAGGAGCAGGGAGTCTGACGCACGAGAC
GACCCCGCGGAGATGAAGGCTCGCTTTGAGGAAGCAGCGCTGTTGGCTCA
GCAGGGAGTCTGACGCACGAGACGACCCCGCGGAGATGAAGGCTCGCTTT
GAGGAAGCAGCGCTGTTGGCTCAGGCGGAGGGCAGGTCTTCCAGCACTGA
TTGGAGCAGCACTGCCTGGAGCCGGCCGACGTCGAACTACTCCACCGGCG
CTGCCGCCCCCGCCGCCGCCGCCGCCCCAGGCACGCGGAGGGCAGGTCTT
CCAGCACTGATTGGAGCAGCACTGCCTGGAGCCGGCCGACGTCGAACTAC
TCCACCGGCGCTGCCGCCCCCGCCGCCGCCGCCGCCCCAGGCACCAACCC
TTCCTTTGCTTCGGGTTTAGGCGGCCGGCAGAAGTCCGGTGGAAGCAGCG
GCGGCGGTAGCGGCGGCGCGAGGCAGCCCGACCACTACGACCTCCCGGTG
AGGCCAGCTCAGGGCGGCATGGCGACGGGACTGGGGGCACCTGCACGCTC
GGCGCAACCCTTCCTTTGCTTCGGGTTTAGGCGGCCGGCAGAAGTCCGGT
GGAAGCAGCGGCGGCGGTAGCGGCGGCGCGAGGCAGCCCGACCACTACGA
CCTCCCGGTGAGGCCAGCTCAGGGCGGCATGGCGACGGGACTGGGGGCAC
CTGCACGCTCGGCGAGCGGGGGGCGTAGCCGCGGGGGTGGAGGCGAAACC
GCGAGTGCGGCGCAGCGGAAGCAAGACAGCGGGGGGCGTAGCCGCGGGGG
TGGAGGCGAAACCGCGAGTGCGGCGCAGCGGAAGCAAGACGTTCTCGTGG
GTAGGCTGGTAGACATGGGCTTTTCCAGGCCTCAGGCGGAGGACGCCCTG
ATGAAGAGCGGGGGCGACCCGGATTTGGCGGCTGAGCAGCTGATGACGCA
GGTTCTCGTGGGTAGGCTGGTAGACATGGGCTTTTCCAGGCCTCAGGCGG
AGGACGCCCTGATGAAGAGCGGGGGCGACCCGGATTTGGCGGCTGAGCAG
CTGATGACGCAGGGGTCTGAGCCTGCGGCCGGCAGCAACGGCAGGGGTGG
CGGTGGGTCGCGAGCGGCCCCGCCGATCCCTCCCAGGGCGAATCGTGGCC
TGCCGGACAACTTCTCCCGGCAGACCGAGAACCCGGTGACTACTTCCGCC
TCGGGAACGAGCAGGGGTCTGAGCCTGCGGCCGGCAGCAACGGCAGGGGT
GGCGGTGGGTCGCGAGCGGCCCCGCCGATCCCTCCCAGGGCGAATCGTGG
CCTGCCGGACAACTTCTCCCGGCAGACCGAGAACCCGGTGACTACTTCCG
CCTCGGGAACGAGCAGGTCCACCCACTTCTTCGGGGGCGGCGGCGGCGGC
GGAGCGTCAGCAACCGCAGCGCCCGCCACCGCAAGGGGCAGCAGCAGCCA
GTCCCCTCCGCAGTCAGCCTCGATGCGTCGGGCGGTAGGAGGAGTCGGAA
ACAACAGCAACAACGATATCGACGGAGGGCTTGCCGACTTTTTGGGGTCC
CCCGCGGGGTCCTCGACGAGCGGCGGCGGCGGTGGCGGCGGCGGGCGGAG
AGCGCGGGACGAGGCCGACCGGTACGGGCTGTTCACAACGACCACCGGGG
CGGCGGCGCCCGCAGGGAGGTCTCGCGTGGCGCAGTCGAGGTCGCGGTAT
GACACGCTGTTCGGGGAAGAGGTCCACCCACTTCTTCGGGGGCGGCGGCG
GCGGCGGAGCGTCAGCAACCGCAGCGCCCGCCACCGCAAGGGGCAGCAGC
AGCCAGTCCCCTCCGCAGTCAGCCTCGATGCGTCGGGCGGTAGGAGGAGT
CGGAAACAACAGCAACAACGATATCGACGGAGGGCTTGCCGACTTTTTGG
GGTCCCCCGCGGGGTCCTCGACGAGCGGCGGCGGCGGTGGCGGCGGCGGG
CGGAGAGCGCGGGACGAGGCCGACCGGTACGGGCTGTTCACAACGACCAC
CGGGGCGGCGGCGCCCGCAGGGAGGTCTCGCGTGGCGCAGTCGAGGTCGC
GGTATGACACGCTGTTCGGGGAAGAG
back to top