mRNA_L-elsbetiae_contig4891.12813.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A836CLN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN6_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.570e-45 Identity = 92/167 (55.09%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 1 VKVSSEVTLQQGAAHHRE-EIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADT-DPSK----IATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFRATGR 483 VKV + + LQQ A H + CSSCG +P +FHAV YKT++ HFEQV+DL S P SG V+WPP+ EI+ AAGGVGFG M + DP I EDV IPPVIR+LHP+LAA Y RHRRDPLFLYK A VCE C+L YA LAS AFR R Sbjct: 308 VKVPAHLRLQQDAVHDPVGAVPRAPRLQCSSCGALTPAKSFHAVPYKTVVVHFEQVLDLASKHPEVTSGTVQWPPAPEIIAAAGGVGFGAAAAMLSSGDPPAAARAITLEDVTIPPVIRALHPRLAADAYARHRRDPLFLYKCAEVCERCYLAYAGLASAAFRTRSR 474
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: F0YIR0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIR0_AURAN) HSP 1 Score: 156 bits (395), Expect = 2.510e-38 Identity = 102/307 (33.22%), Postives = 161/307 (52.44%), Query Frame = 1 Query: 1 VKVSSEVTLQQGAAHHREEIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELAS------LAFRATGRQA--LTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKSATLFGRSVISSNVPQQASPELPKTLRRCEDVTEEDVRREAGLAVPGSS-------RHSSLDAVIRAREEAFFRELAAEEH---KCAHPLMHMVASSRKL 867 V++ + L A H +E + +C SCG+++ FH + YKTI+AHFEQ+V ++ D G V+WPP+ I+ AAGGVGFG++ +AD + +++ D +PP+IR +HPKL+ Y ++RRDPLF+YKT +VCE CFLVYAEL+S + + TG+Q+ +T A SH L R +L +S Q +SV N +P +P + A LA+P R S++ +++ RE+ FF+E + + + HPL H++ S + + Sbjct: 268 VQLPPHIKLVDKANHSDDEAQALLCMHCISCGRSATSDQFHPIQYKTIVAHFEQLVAMLQTD---GHGSVKWPPNPTIIAAAGGVGFGNLEALADRNRNEMRGADATMPPIIRQIHPKLSLDAYRKYRRDPLFMYKTVVVCEDCFLVYAELSSSPNASVVTRQCTGKQSPFVTSDNCFPWRQAEMVSHKLPR-QLRMQSTQ-----------SKSVWMPN----EAPSIPAPIYNS-----------AKLALPPQQAEDESVGRILSIEDMVKQREDLFFQEARSSQTVNLQKGHPLTHLITSFQSI 544
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A7S1XZC3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZC3_9STRA) HSP 1 Score: 155 bits (392), Expect = 6.740e-38 Identity = 109/315 (34.60%), Postives = 157/315 (49.84%), Query Frame = 1 Query: 1 VKVSSEVTLQQGAAHHREEIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPA--NRSG----VVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLA------FRATGRQALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLP-------KKKSATL----FGRSVISSNVPQQASPELPKTLRRCEDVTEEDVRREAGLAVPGSSRHSSLDAVIRAREEAFFRELAAE---EHKCAHPLMHMVASSRKL 867 ++V V L H +++ + C SCGK P + F V YK ++ HFEQ++ L++ DP+ SG +EWPP E++ AAG VGFG + + +K EDVIIPP+ R LHPKL+ Y + +RDPLFLYKT +VCE CFLV+AELAS A + GR L H S RS S K +++W+P+P K+ L G S +S +PELP T+R ++ + R+ S + + +R RE FFR + PL+HM+ S ++L Sbjct: 265 MRVPKHVLLDHQVNHG--DLQRRVLARCISCGKNYPDNQFQPVSYKCVMLHFEQILTLMALDPSYDQPSGGFERTLEWPPEPEVIAAAGNVGFGLVEEELEKK-NKFVEEDVIIPPIFRHLHPKLSCKMYGKLKRDPLFLYKTCMVCEECFLVFAELASTAATSASVLKTIGRTRLA-HAGSAALGTGPRSKG-SYSKYDDDAWKPVPVPAESKAKRAREALRKGGMGESTLSKV--SGTAPELPDTIRGVQEARDVTFRKLFPDDNMDSQEGAYFEDSMRERENEFFRRMGQTGFTPQSGESPLVHMIQSQQRL 572
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A6S8UJB5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8UJB5_9STRA) HSP 1 Score: 140 bits (353), Expect = 5.150e-33 Identity = 98/329 (29.79%), Postives = 164/329 (49.85%), Query Frame = 1 Query: 1 VKVSSEVTLQQGAAHHREEIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFRATGRQALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKSATLFGRSVISSNVPQQASPELPKTLRRCEDVTEEDVRREAGLAVPGSSRHS------------SLDAVIRAREEAFFRELAAEEHKCAHPLMHMVASSRKLASIGVPVHQLDPRAAVKKSKKAAKTSPY 951 +++ ++VTL H + E K C SCGK++ FH V Y+TII+HFE+ + + ++S ++ P I+EA+GGVGFG + D + ++IPP+I+ +HPKL+ Y+R+RRDPLF+YK+A VCE+C+LVYAE + A ++ + + D+T T+ +A +++T +E+ Q K A G ++ + P +P + +VPG++ S S+ A+I RE++FF ++++ + HPL H+ S R + Q P KS A +PY Sbjct: 261 IQLPADVTLIDKPNHSQGEFKPLNCLQCISCGKSATSDKFHQVRYQTIISHFERALAAI----VDKSQTSKYYPEPLIMEASGGVGFGKAK---DCAGIPLRGAGIVIPPIIKQIHPKLSPEIYKRYRRDPLFMYKSAAVCENCYLVYAEFVTAA--SSRKYSELDYT--TKANAKTKTNT-------DEALQ----KNLAANNGNKTLNRQTAKPLMPSIPAPI----------------YSVPGANTGSPYFDSKNYSDGLSVGAIIHQREKSFFNDVSSAHLQKGHPLAHLATSFRSI--------QQHPPGGFDKSSNAHTLNPY 543
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A6U2PKG9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PKG9_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.260e-32 Identity = 120/409 (29.34%), Postives = 193/409 (47.19%), Query Frame = 1 Query: 58 IKNPTVGN-----CSSCGKTSPGSN-FHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFRATGRQALTDHTLST--------QFSATHRSHTLSRLKLSEES-WQP----------LPKKKSATL------FGRSVISSNVPQQASPELPKTL-------RRCEDVTE--EDVRREAGLAVPGSSRHSSLDAVIRAREEAFFRE----LAAEEHKCAHPLMHMVASSRKLASIGVPVHQLDPRAAVKKSKKAAKTSPYEKPLTLVVPYTGRVVARSPHLPARQNTQPSGNPQEEGSNEDKVLSSENRHRQFLDETLSAVHEQLES 1152 + NP+ + C SC K P N H V YKTIIAHFE+VVD++ D +++ V+ WPP + ++ AAG VGFG + D S T D++IPP+IR LH +L GY R+RRDPLFL+KT VCE CFL YA+LAS F+ + D+ + +F + + RL+ +S W P L ++ +AT GRS ++ + P+ P + C+D D + P ++ SL+ V R R++ E +A+ ++ ++PL H++ + ++ + G +Q R K+ K K +PYE PL R + ++ + + GN + +H+ F+ ET+ + +QLE+ Sbjct: 281 VNNPSTDDGGAKKCLSCAKALPILNEAHPVPYKTIIAHFEKVVDMIKEDSLDKN-VISWPPESSVINAAGHVGFGFAKASNDASISFAETIDLVIPPIIRQLHTRLKVAGYRRYRRDPLFLHKTCSVCEICFLSYAQLASTGFQIIRPILIEDNDENQHHRGKKAGEFESNTGATREERLRRKLQSKWMPADDPDGVPSFLTRENAATRPNENASLGRSKMNDIL--SGVPDFPIAITDVLVDSNECDDKAWGLHDKLLQMATDEPFAAITLSLEEVRRRRDDDVLAESMRGIASPQNSESNPLQHLITAYNRM-TYGARANQ---RKETKR-KHGQKRNPYEIPLVFA-DEDDRYSKQKLNVDVAKGLEGRGN-------------DDTKHKDFIQETVRELEDQLEA 667
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A3D4HJD4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A3D4HJD4_9BACT) HSP 1 Score: 125 bits (314), Expect = 2.650e-28 Identity = 62/155 (40.00%), Postives = 97/155 (62.58%), Query Frame = 1 Query: 1 VKVSSEVTLQQGAAHHREEIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLA 465 +++ ++VTL + H + E K C SCGK++ FH V Y+TII+HFE+ + + ++S ++ P I+EA+GGVGFG + D + ++IPP+I+ +HPKL+ Y+R+RRDPLF+YK+A VCE+C+LVYAE + A Sbjct: 226 IQLPADVTLIEKPNHSQGEFKPLNCLQCISCGKSATSDKFHQVRYQTIISHFERALAAI----VDKSQTSKYYPEPLIMEASGGVGFGKAK---DCAGIPLRGAGIVIPPIIKQIHPKLSPEIYKRYRRDPLFMYKSAAVCENCYLVYAEFVTAA 373
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A1V9Z6W2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6W2_9STRA) HSP 1 Score: 125 bits (314), Expect = 9.610e-28 Identity = 116/387 (29.97%), Postives = 176/387 (45.48%), Query Frame = 1 Query: 61 KNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFRATGRQALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKSATLFGRSVISSNVPQQASPELPKT-----LRRCEDVTEEDVRR----------EAGLAVPGSSRHSSL--DAVIRAREEAFFRELAAEEHKCAHPLMHMVASSRKLASIGVPVHQLDPRAAVKKSKKAAKTSPYEKPLTLVVPYTG------RVVARSPHLPARQNTQPSGNPQEEGSNEDKVLSSENRHRQFLDETLSAVHEQLES 1152 KN C+SC K + YK +I HF Q L+ + A+++ VV WPP ++ AAGGVGFG + M DT + DV IPPV++ LHP L + R DP+FLYKTA +CESC+LVYA+ ++ A A + L Q + K + +W P P++ + S P P LP L E DV+R EA A P S+ +A+++ +E++FF +LA ++ PL H+V S+ +L ++ +A+ + K AK +PY +V G + VA+ +P R PS P D ++ +HR+FL ++L + QL S Sbjct: 280 KNAVPVKCTSCAKAIDEVHVLQTSYKAVIEHFRQ---LLLHLRASKADVVLWPPDDAVVAAAGGVGFGILDEM-DTGSGAVTEMDVTIPPVLQYLHPHLTVADFVRFATDPVFLYKTAPMCESCYLVYADFSTSALEANTVREHAPAILRPQRAVPLLKERADGGKKPDAAWLPPPRQPKP--LKPRITKSAYPFTDPPGLPARIDHTMLAELEQSLPVDVKRVDAAKHAYMPEAWKAPPAMVPDPSVLSEALVK-KEDSFFTDLAGATNQQHRPLQHLVESASRLEAL---------KASALGAIKTAKRNPY----AVVQKLHGDNEAVKKAVAKR-RMPKRGIQFPSVAPS------DDEHTTSRKHREFLLKSLREIQAQLAS 639
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: T0S7F0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S7F0_SAPDV) HSP 1 Score: 124 bits (310), Expect = 3.220e-27 Identity = 122/394 (30.96%), Postives = 180/394 (45.69%), Query Frame = 1 Query: 61 KNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFRA-TGRQ----ALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKSATLFGRSVISSNVPQQASPELPKT-----LRRCEDVTEEDVRREAGLAVP----------GSSRHSSLDA-VIRAREEAFFRELAAEE--HKCAH-PLMHMVASSRKLASIGVPVHQLDPRAAVKKSKKAAKTSPYEKPLTLV------VPYTGRVVARSPHLPARQNTQPSGNPQEEGSNEDKVLSSENRHRQFLDETLSAVHEQLES 1152 KN + C+SC ++ YK +I HF Q L+++ A+R+ VV WPP ++ AAGGVGFG + M D + DV IPPV++ LHP L + R DP+FLYKTA VCE C+LVYA+ ++ A A T R+ L L A + T K S+++W P P K L + + + P P LP L E DV+RE VP G + ++ A + +E+AFF +L A + H PL HMV S+ +L ++ + S KA K +PY LV + + A++ P+ + PS ED+ +S +HR+FL ++L + QL S Sbjct: 270 KNAVLAKCTSCARSIDEIYLLHASYKAVIEHFRQ---LLTHLRASRASVVLWPPDDAVIAAAGGVGFGILEDM-DVGSGPVREVDVTIPPVLQYLHPHLTVPDFVRFATDPVFLYKTAPVCEKCYLVYADFSTSALEANTVREHAPAILRPKRLVPPLKARFEAST----KPSDDAWLPKPTKTKPAL--KMPVKTQYPFTDPPTLPARINHTMLSEMERNLPIDVKREEASKVPYMPDEWKQVPGMVPNPNVLAHSLVKKEDAFFTDLTASHLNSEAFHRPLQHMVESASRLDALKTNL--------ALGSLKAPKRNPYAVVQKLVGGDDMSSAFEKKTRAKAKKPPSFPSVAPS---------EDEHTTSR-KHREFLLKSLREIQRQLGS 635
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A7S4N7Q7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N7Q7_9STRA) HSP 1 Score: 116 bits (291), Expect = 3.550e-27 Identity = 65/160 (40.62%), Postives = 96/160 (60.00%), Query Frame = 1 Query: 1 VKVSSEVTLQQGAAHHRE-EIKNP-TVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDL-VSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFR 471 ++++ + + Q A H +I N + +C SC +F V YKTII+H+E+V+++ V+ D + WPP ++++ AGGVGFG I M D +++ EDV IPPVIR L+ +L GY R+R DPLFL+K VCE CFL YA L S +F+ Sbjct: 43 IQLAPSIKMTQNANHDPTIKISNKKSFISCLSCANMDIEDHFQPVPYKTIISHYEKVMEISVAQDDTSL-----WPPHPDLIKTAGGVGFGRIGQMISKD--EVSDEDVTIPPVIRKLYQRLKVDGYLRYRSDPLFLHKKCKVCEDCFLSYANLVSTSFQ 195
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A067BGG5_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BGG5_SAPPC) HSP 1 Score: 117 bits (294), Expect = 5.470e-26 Identity = 109/388 (28.09%), Postives = 171/388 (44.07%), Query Frame = 1 Query: 61 KNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAF-----RATGRQALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKSATLFGRSVISSNVPQQASPELPKTLRRC----------EDVTEEDVRREAGLA-----VPGSSRHSSLDA-VIRAREEAFFRELAAEE---HKCAHPLMHMVASSRKLASIGVPVHQLDPRAAVKKSKKAAKTSPYEKPLTLVVPYTGRVVARSPH---LPARQNTQPSGNPQEEGSNEDKVLSSENRHRQFLDETLSAVHEQ 1143 KN + C+SC K + YK +I HF Q L+++ A+++ VV WPP ++ AAGGVGFG + M D + + DV IPPV+ LHP L + R DP+FLYKTA VCE+C+LVYA+ ++ A R L L +A + + K +++W P P K A + + + P P LP + D+ +D+++ L VP + ++ A + +E+ FF +L A PL HMV ++ +L ++ L S + K +PY +V GR S A+ QP + +ED+ +S +HR+FL +L + Q Sbjct: 24 KNAVIAKCTSCAKAIDQVHMLHASYKAVIEHFRQ---LLTHLRASKASVVLWPPDDAVIAAAGGVGFGILNEM-DVESGPVTEADVTIPPVLLYLHPHLTVEDFVRFATDPVFLYKTAPVCENCYLVYADFSTSALEVNTVREHAPAILRPKRLVPPLNARFEAKST---KPPDDAWLPKPAK--AKPAPKMTVKTQYPFTDPPTLPARIDHTMLSDMERSLPSDIKRDDLKKVPYLPDEWKQVPAMVPNPNVLAPALVKKEDDFFTDLTASHLNSESFHRPLQHMVETASRLDALKTTAPALG-------SLRTTKRNPY----AVVQKLVGRDDMSSTFEKKARAKAKKQPHASFPSVAPSEDEHTTSR-KHREFLLNSLREIQRQ 390 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4891.12813.1 >prot_L-elsbetiae_contig4891.12813.1 ID=prot_L-elsbetiae_contig4891.12813.1|Name=mRNA_L-elsbetiae_contig4891.12813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=389bp VKVSSEVTLQQGAAHHREEIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAback to top mRNA from alignment at L-elsbetiae_contig4891:267..2390+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4891.12813.1 ID=mRNA_L-elsbetiae_contig4891.12813.1|Name=mRNA_L-elsbetiae_contig4891.12813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2124bp|location=Sequence derived from alignment at L-elsbetiae_contig4891:267..2390+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4891:267..2390+ >mRNA_L-elsbetiae_contig4891.12813.1 ID=mRNA_L-elsbetiae_contig4891.12813.1|Name=mRNA_L-elsbetiae_contig4891.12813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2334bp|location=Sequence derived from alignment at L-elsbetiae_contig4891:267..2390+ (Laminarionema elsbetiae ELsaHSoW15)back to top |