mRNA_L-elsbetiae_contig4891.12813.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig4891.12813.1
Unique NamemRNA_L-elsbetiae_contig4891.12813.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A836CLN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN6_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.570e-45
Identity = 92/167 (55.09%), Postives = 107/167 (64.07%), Query Frame = 1
Query:    1 VKVSSEVTLQQGAAHHRE-EIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADT-DPSK----IATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFRATGR 483
            VKV + + LQQ A H     +       CSSCG  +P  +FHAV YKT++ HFEQV+DL S  P   SG V+WPP+ EI+ AAGGVGFG    M  + DP      I  EDV IPPVIR+LHP+LAA  Y RHRRDPLFLYK A VCE C+L YA LAS AFR   R
Sbjct:  308 VKVPAHLRLQQDAVHDPVGAVPRAPRLQCSSCGALTPAKSFHAVPYKTVVVHFEQVLDLASKHPEVTSGTVQWPPAPEIIAAAGGVGFGAAAAMLSSGDPPAAARAITLEDVTIPPVIRALHPRLAADAYARHRRDPLFLYKCAEVCERCYLAYAGLASAAFRTRSR 474          
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: F0YIR0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIR0_AURAN)

HSP 1 Score: 156 bits (395), Expect = 2.510e-38
Identity = 102/307 (33.22%), Postives = 161/307 (52.44%), Query Frame = 1
Query:    1 VKVSSEVTLQQGAAHHREEIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELAS------LAFRATGRQA--LTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKSATLFGRSVISSNVPQQASPELPKTLRRCEDVTEEDVRREAGLAVPGSS-------RHSSLDAVIRAREEAFFRELAAEEH---KCAHPLMHMVASSRKL 867
            V++   + L   A H  +E +     +C SCG+++    FH + YKTI+AHFEQ+V ++  D     G V+WPP+  I+ AAGGVGFG++  +AD + +++   D  +PP+IR +HPKL+   Y ++RRDPLF+YKT +VCE CFLVYAEL+S      +  + TG+Q+  +T         A   SH L R +L  +S Q            +SV   N     +P +P  +              A LA+P          R  S++ +++ RE+ FF+E  + +    +  HPL H++ S + +
Sbjct:  268 VQLPPHIKLVDKANHSDDEAQALLCMHCISCGRSATSDQFHPIQYKTIVAHFEQLVAMLQTD---GHGSVKWPPNPTIIAAAGGVGFGNLEALADRNRNEMRGADATMPPIIRQIHPKLSLDAYRKYRRDPLFMYKTVVVCEDCFLVYAELSSSPNASVVTRQCTGKQSPFVTSDNCFPWRQAEMVSHKLPR-QLRMQSTQ-----------SKSVWMPN----EAPSIPAPIYNS-----------AKLALPPQQAEDESVGRILSIEDMVKQREDLFFQEARSSQTVNLQKGHPLTHLITSFQSI 544          
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A7S1XZC3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZC3_9STRA)

HSP 1 Score: 155 bits (392), Expect = 6.740e-38
Identity = 109/315 (34.60%), Postives = 157/315 (49.84%), Query Frame = 1
Query:    1 VKVSSEVTLQQGAAHHREEIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPA--NRSG----VVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLA------FRATGRQALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLP-------KKKSATL----FGRSVISSNVPQQASPELPKTLRRCEDVTEEDVRREAGLAVPGSSRHSSLDAVIRAREEAFFRELAAE---EHKCAHPLMHMVASSRKL 867
            ++V   V L     H   +++   +  C SCGK  P + F  V YK ++ HFEQ++ L++ DP+    SG     +EWPP  E++ AAG VGFG +    +   +K   EDVIIPP+ R LHPKL+   Y + +RDPLFLYKT +VCE CFLV+AELAS A       +  GR  L  H  S       RS   S  K  +++W+P+P       K+    L     G S +S       +PELP T+R  ++  +   R+        S   +  +  +R RE  FFR +            PL+HM+ S ++L
Sbjct:  265 MRVPKHVLLDHQVNHG--DLQRRVLARCISCGKNYPDNQFQPVSYKCVMLHFEQILTLMALDPSYDQPSGGFERTLEWPPEPEVIAAAGNVGFGLVEEELEKK-NKFVEEDVIIPPIFRHLHPKLSCKMYGKLKRDPLFLYKTCMVCEECFLVFAELASTAATSASVLKTIGRTRLA-HAGSAALGTGPRSKG-SYSKYDDDAWKPVPVPAESKAKRAREALRKGGMGESTLSKV--SGTAPELPDTIRGVQEARDVTFRKLFPDDNMDSQEGAYFEDSMRERENEFFRRMGQTGFTPQSGESPLVHMIQSQQRL 572          
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A6S8UJB5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8UJB5_9STRA)

HSP 1 Score: 140 bits (353), Expect = 5.150e-33
Identity = 98/329 (29.79%), Postives = 164/329 (49.85%), Query Frame = 1
Query:    1 VKVSSEVTLQQGAAHHREEIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFRATGRQALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKSATLFGRSVISSNVPQQASPELPKTLRRCEDVTEEDVRREAGLAVPGSSRHS------------SLDAVIRAREEAFFRELAAEEHKCAHPLMHMVASSRKLASIGVPVHQLDPRAAVKKSKKAAKTSPY 951
            +++ ++VTL     H + E K      C SCGK++    FH V Y+TII+HFE+ +  +     ++S   ++ P   I+EA+GGVGFG  +   D     +    ++IPP+I+ +HPKL+   Y+R+RRDPLF+YK+A VCE+C+LVYAE  + A  ++ + +  D+T  T+ +A  +++T       +E+ Q    K  A   G   ++    +   P +P  +                 +VPG++  S            S+ A+I  RE++FF ++++   +  HPL H+  S R +        Q  P     KS  A   +PY
Sbjct:  261 IQLPADVTLIDKPNHSQGEFKPLNCLQCISCGKSATSDKFHQVRYQTIISHFERALAAI----VDKSQTSKYYPEPLIMEASGGVGFGKAK---DCAGIPLRGAGIVIPPIIKQIHPKLSPEIYKRYRRDPLFMYKSAAVCENCYLVYAEFVTAA--SSRKYSELDYT--TKANAKTKTNT-------DEALQ----KNLAANNGNKTLNRQTAKPLMPSIPAPI----------------YSVPGANTGSPYFDSKNYSDGLSVGAIIHQREKSFFNDVSSAHLQKGHPLAHLATSFRSI--------QQHPPGGFDKSSNAHTLNPY 543          
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A6U2PKG9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PKG9_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.260e-32
Identity = 120/409 (29.34%), Postives = 193/409 (47.19%), Query Frame = 1
Query:   58 IKNPTVGN-----CSSCGKTSPGSN-FHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFRATGRQALTDHTLST--------QFSATHRSHTLSRLKLSEES-WQP----------LPKKKSATL------FGRSVISSNVPQQASPELPKTL-------RRCEDVTE--EDVRREAGLAVPGSSRHSSLDAVIRAREEAFFRE----LAAEEHKCAHPLMHMVASSRKLASIGVPVHQLDPRAAVKKSKKAAKTSPYEKPLTLVVPYTGRVVARSPHLPARQNTQPSGNPQEEGSNEDKVLSSENRHRQFLDETLSAVHEQLES 1152
            + NP+  +     C SC K  P  N  H V YKTIIAHFE+VVD++  D  +++ V+ WPP + ++ AAG VGFG  +   D   S   T D++IPP+IR LH +L   GY R+RRDPLFL+KT  VCE CFL YA+LAS  F+      + D+  +         +F +   +    RL+   +S W P          L ++ +AT        GRS ++  +     P+ P  +         C+D      D   +     P ++   SL+ V R R++    E    +A+ ++  ++PL H++ +  ++ + G   +Q   R   K+ K   K +PYE PL        R   +  ++   +  +  GN              + +H+ F+ ET+  + +QLE+
Sbjct:  281 VNNPSTDDGGAKKCLSCAKALPILNEAHPVPYKTIIAHFEKVVDMIKEDSLDKN-VISWPPESSVINAAGHVGFGFAKASNDASISFAETIDLVIPPIIRQLHTRLKVAGYRRYRRDPLFLHKTCSVCEICFLSYAQLASTGFQIIRPILIEDNDENQHHRGKKAGEFESNTGATREERLRRKLQSKWMPADDPDGVPSFLTRENAATRPNENASLGRSKMNDIL--SGVPDFPIAITDVLVDSNECDDKAWGLHDKLLQMATDEPFAAITLSLEEVRRRRDDDVLAESMRGIASPQNSESNPLQHLITAYNRM-TYGARANQ---RKETKR-KHGQKRNPYEIPLVFA-DEDDRYSKQKLNVDVAKGLEGRGN-------------DDTKHKDFIQETVRELEDQLEA 667          
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A3D4HJD4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A3D4HJD4_9BACT)

HSP 1 Score: 125 bits (314), Expect = 2.650e-28
Identity = 62/155 (40.00%), Postives = 97/155 (62.58%), Query Frame = 1
Query:    1 VKVSSEVTLQQGAAHHREEIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLA 465
            +++ ++VTL +   H + E K      C SCGK++    FH V Y+TII+HFE+ +  +     ++S   ++ P   I+EA+GGVGFG  +   D     +    ++IPP+I+ +HPKL+   Y+R+RRDPLF+YK+A VCE+C+LVYAE  + A
Sbjct:  226 IQLPADVTLIEKPNHSQGEFKPLNCLQCISCGKSATSDKFHQVRYQTIISHFERALAAI----VDKSQTSKYYPEPLIMEASGGVGFGKAK---DCAGIPLRGAGIVIPPIIKQIHPKLSPEIYKRYRRDPLFMYKSAAVCENCYLVYAEFVTAA 373          
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A1V9Z6W2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6W2_9STRA)

HSP 1 Score: 125 bits (314), Expect = 9.610e-28
Identity = 116/387 (29.97%), Postives = 176/387 (45.48%), Query Frame = 1
Query:   61 KNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFRATGRQALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKSATLFGRSVISSNVPQQASPELPKT-----LRRCEDVTEEDVRR----------EAGLAVPGSSRHSSL--DAVIRAREEAFFRELAAEEHKCAHPLMHMVASSRKLASIGVPVHQLDPRAAVKKSKKAAKTSPYEKPLTLVVPYTG------RVVARSPHLPARQNTQPSGNPQEEGSNEDKVLSSENRHRQFLDETLSAVHEQLES 1152
            KN     C+SC K     +     YK +I HF Q   L+ +  A+++ VV WPP   ++ AAGGVGFG +  M DT    +   DV IPPV++ LHP L    + R   DP+FLYKTA +CESC+LVYA+ ++ A  A   +      L  Q +           K  + +W P P++         +  S  P    P LP       L   E     DV+R          EA  A P      S+  +A+++ +E++FF +LA   ++   PL H+V S+ +L ++         +A+   + K AK +PY     +V    G      + VA+   +P R    PS  P       D   ++  +HR+FL ++L  +  QL S
Sbjct:  280 KNAVPVKCTSCAKAIDEVHVLQTSYKAVIEHFRQ---LLLHLRASKADVVLWPPDDAVVAAAGGVGFGILDEM-DTGSGAVTEMDVTIPPVLQYLHPHLTVADFVRFATDPVFLYKTAPMCESCYLVYADFSTSALEANTVREHAPAILRPQRAVPLLKERADGGKKPDAAWLPPPRQPKP--LKPRITKSAYPFTDPPGLPARIDHTMLAELEQSLPVDVKRVDAAKHAYMPEAWKAPPAMVPDPSVLSEALVK-KEDSFFTDLAGATNQQHRPLQHLVESASRLEAL---------KASALGAIKTAKRNPY----AVVQKLHGDNEAVKKAVAKR-RMPKRGIQFPSVAPS------DDEHTTSRKHREFLLKSLREIQAQLAS 639          
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: T0S7F0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S7F0_SAPDV)

HSP 1 Score: 124 bits (310), Expect = 3.220e-27
Identity = 122/394 (30.96%), Postives = 180/394 (45.69%), Query Frame = 1
Query:   61 KNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFRA-TGRQ----ALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKSATLFGRSVISSNVPQQASPELPKT-----LRRCEDVTEEDVRREAGLAVP----------GSSRHSSLDA-VIRAREEAFFRELAAEE--HKCAH-PLMHMVASSRKLASIGVPVHQLDPRAAVKKSKKAAKTSPYEKPLTLV------VPYTGRVVARSPHLPARQNTQPSGNPQEEGSNEDKVLSSENRHRQFLDETLSAVHEQLES 1152
            KN  +  C+SC ++          YK +I HF Q   L+++  A+R+ VV WPP   ++ AAGGVGFG +  M D     +   DV IPPV++ LHP L    + R   DP+FLYKTA VCE C+LVYA+ ++ A  A T R+     L    L     A   + T    K S+++W P P K    L  +  + +  P    P LP       L   E     DV+RE    VP          G   + ++ A  +  +E+AFF +L A     +  H PL HMV S+ +L ++   +           S KA K +PY     LV        +  +  A++   P+  +  PS         ED+  +S  +HR+FL ++L  +  QL S
Sbjct:  270 KNAVLAKCTSCARSIDEIYLLHASYKAVIEHFRQ---LLTHLRASRASVVLWPPDDAVIAAAGGVGFGILEDM-DVGSGPVREVDVTIPPVLQYLHPHLTVPDFVRFATDPVFLYKTAPVCEKCYLVYADFSTSALEANTVREHAPAILRPKRLVPPLKARFEAST----KPSDDAWLPKPTKTKPAL--KMPVKTQYPFTDPPTLPARINHTMLSEMERNLPIDVKREEASKVPYMPDEWKQVPGMVPNPNVLAHSLVKKEDAFFTDLTASHLNSEAFHRPLQHMVESASRLDALKTNL--------ALGSLKAPKRNPYAVVQKLVGGDDMSSAFEKKTRAKAKKPPSFPSVAPS---------EDEHTTSR-KHREFLLKSLREIQRQLGS 635          
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A7S4N7Q7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N7Q7_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.550e-27
Identity = 65/160 (40.62%), Postives = 96/160 (60.00%), Query Frame = 1
Query:    1 VKVSSEVTLQQGAAHHRE-EIKNP-TVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDL-VSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAFR 471
            ++++  + + Q A H    +I N  +  +C SC       +F  V YKTII+H+E+V+++ V+ D  +      WPP  ++++ AGGVGFG I  M   D  +++ EDV IPPVIR L+ +L   GY R+R DPLFL+K   VCE CFL YA L S +F+
Sbjct:   43 IQLAPSIKMTQNANHDPTIKISNKKSFISCLSCANMDIEDHFQPVPYKTIISHYEKVMEISVAQDDTSL-----WPPHPDLIKTAGGVGFGRIGQMISKD--EVSDEDVTIPPVIRKLYQRLKVDGYLRYRSDPLFLHKKCKVCEDCFLSYANLVSTSFQ 195          
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Match: A0A067BGG5_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BGG5_SAPPC)

HSP 1 Score: 117 bits (294), Expect = 5.470e-26
Identity = 109/388 (28.09%), Postives = 171/388 (44.07%), Query Frame = 1
Query:   61 KNPTVGNCSSCGKTSPGSNFHAVHYKTIIAHFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSKIATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAELASLAF-----RATGRQALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKSATLFGRSVISSNVPQQASPELPKTLRRC----------EDVTEEDVRREAGLA-----VPGSSRHSSLDA-VIRAREEAFFRELAAEE---HKCAHPLMHMVASSRKLASIGVPVHQLDPRAAVKKSKKAAKTSPYEKPLTLVVPYTGRVVARSPH---LPARQNTQPSGNPQEEGSNEDKVLSSENRHRQFLDETLSAVHEQ 1143
            KN  +  C+SC K     +     YK +I HF Q   L+++  A+++ VV WPP   ++ AAGGVGFG +  M D +   +   DV IPPV+  LHP L    + R   DP+FLYKTA VCE+C+LVYA+ ++ A      R      L    L    +A   + +    K  +++W P P K  A    +  + +  P    P LP  +              D+  +D+++   L      VP    + ++ A  +  +E+ FF +L A          PL HMV ++ +L ++      L        S +  K +PY     +V    GR    S       A+   QP  +      +ED+  +S  +HR+FL  +L  +  Q
Sbjct:   24 KNAVIAKCTSCAKAIDQVHMLHASYKAVIEHFRQ---LLTHLRASKASVVLWPPDDAVIAAAGGVGFGILNEM-DVESGPVTEADVTIPPVLLYLHPHLTVEDFVRFATDPVFLYKTAPVCENCYLVYADFSTSALEVNTVREHAPAILRPKRLVPPLNARFEAKST---KPPDDAWLPKPAK--AKPAPKMTVKTQYPFTDPPTLPARIDHTMLSDMERSLPSDIKRDDLKKVPYLPDEWKQVPAMVPNPNVLAPALVKKEDDFFTDLTASHLNSESFHRPLQHMVETASRLDALKTTAPALG-------SLRTTKRNPY----AVVQKLVGRDDMSSTFEKKARAKAKKQPHASFPSVAPSEDEHTTSR-KHREFLLNSLREIQRQ 390          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4891.12813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLN6_9STRA1.570e-4555.09Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
F0YIR0_AURAN2.510e-3833.22Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1XZC3_9STRA6.740e-3834.60Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6S8UJB5_9STRA5.150e-3329.79Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A6U2PKG9_9STRA1.260e-3229.34Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A3D4HJD4_9BACT2.650e-2840.00Uncharacterized protein (Fragment) n=1 Tax=Opituta... [more]
A0A1V9Z6W2_9STRA9.610e-2829.97Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0S7F0_SAPDV3.220e-2730.96Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A7S4N7Q7_9STRA3.550e-2740.63Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A067BGG5_SAPPC5.470e-2628.09Uncharacterized protein (Fragment) n=1 Tax=Saprole... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4891contigL-elsbetiae_contig4891:267..2390 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score166.0
Seed ortholog evalue3.5e-38
Seed eggNOG ortholog44056.XP_009040365.1
Hectar predicted targeting categoryother localisation
EggNOG OGs28Q4D@1,2QWT8@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1167
Cds size1167
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4891.12813.1prot_L-elsbetiae_contig4891.12813.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig4891 267..2390 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816483.172615-CDS-L-elsbetiae_contig4891:266..4281622816483.172615-CDS-L-elsbetiae_contig4891:266..428Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4891 267..428 +
1691683592.2145782-CDS-L-elsbetiae_contig4891:266..4281691683592.2145782-CDS-L-elsbetiae_contig4891:266..428Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4891 267..428 +
1622816483.1838477-CDS-L-elsbetiae_contig4891:858..11041622816483.1838477-CDS-L-elsbetiae_contig4891:858..1104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4891 859..1104 +
1691683592.2299151-CDS-L-elsbetiae_contig4891:858..11041691683592.2299151-CDS-L-elsbetiae_contig4891:858..1104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4891 859..1104 +
1622816483.1988711-CDS-L-elsbetiae_contig4891:1305..15921622816483.1988711-CDS-L-elsbetiae_contig4891:1305..1592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4891 1306..1592 +
1691683592.2407675-CDS-L-elsbetiae_contig4891:1305..15921691683592.2407675-CDS-L-elsbetiae_contig4891:1305..1592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4891 1306..1592 +
1622816483.2122416-CDS-L-elsbetiae_contig4891:1918..23901622816483.2122416-CDS-L-elsbetiae_contig4891:1918..2390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4891 1919..2390 +
1691683592.2502093-CDS-L-elsbetiae_contig4891:1918..23901691683592.2502093-CDS-L-elsbetiae_contig4891:1918..2390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4891 1919..2390 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig4891.12813.1

>prot_L-elsbetiae_contig4891.12813.1 ID=prot_L-elsbetiae_contig4891.12813.1|Name=mRNA_L-elsbetiae_contig4891.12813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=389bp
VKVSSEVTLQQGAAHHREEIKNPTVGNCSSCGKTSPGSNFHAVHYKTIIA
HFEQVVDLVSYDPANRSGVVEWPPSAEILEAAGGVGFGDIRLMADTDPSK
IATEDVIIPPVIRSLHPKLAAGGYERHRRDPLFLYKTALVCESCFLVYAE
LASLAFRATGRQALTDHTLSTQFSATHRSHTLSRLKLSEESWQPLPKKKS
ATLFGRSVISSNVPQQASPELPKTLRRCEDVTEEDVRREAGLAVPGSSRH
SSLDAVIRAREEAFFRELAAEEHKCAHPLMHMVASSRKLASIGVPVHQLD
PRAAVKKSKKAAKTSPYEKPLTLVVPYTGRVVARSPHLPARQNTQPSGNP
QEEGSNEDKVLSSENRHRQFLDETLSAVHEQLESTALAE
back to top

mRNA from alignment at L-elsbetiae_contig4891:267..2390+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig4891.12813.1 ID=mRNA_L-elsbetiae_contig4891.12813.1|Name=mRNA_L-elsbetiae_contig4891.12813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2124bp|location=Sequence derived from alignment at L-elsbetiae_contig4891:267..2390+ (Laminarionema elsbetiae ELsaHSoW15)
GTGAAAGTCTCATCAGAAGTCACCCTGCAGCAAGGCGCAGCACATCATCG CGAAGAGATCAAAAACCCGACCGTCGGCAATTGCTCAAGTTGTGGCAAAA CATCACCAGGCAGTAACTTCCATGCTGTGCACTACAAAACCATCATAGCC CATTTTGAGCAGGTGAGGGTGCCCAATTTTTGCGTCGGCAAACGCGCCCG TCGGCTTGTTCAGCAAGACCCCCAACAGAGACTTTTTTTGTTTTCACATT TCTTTCCGGTGCTCGACGGGCTCCTTGCCACGAGGGCATCTTGCCAGAGT ACTGAACCGTGGTCACACAAAAGGCTCCTTTCCTCGAGGCCCCCACTCCC ACCCTCTGCGGTGCTTCCCTCATATTTTTATCGCGAGAAGGTTTCAGCCG TCCCTTTGCCTCGTGGCGACGGTGAGGTCGAAGTTTGTGTACAGCGTTAT CCACTGACAGGGACGAAAGCGAGAGAAAAAAAGTCGTATTCTGCGAGATA AAGTCGCTCCGCCGGGAATCGTGACCTGCCTGCTAGAAGGTGTTCGGGGA TACCAAAAGAGACTAAGACGCATCAATATTTTGTCTTGACAGGTGGTTGA TCTCGTCTCTTATGATCCGGCGAATCGCAGCGGAGTTGTGGAATGGCCGC CGTCGGCAGAAATATTAGAAGCAGCAGGTGGAGTCGGCTTCGGTGATATT CGTTTAATGGCTGACACCGATCCGTCAAAGATTGCAACGGAAGATGTCAT CATCCCGCCAGTTATCCGCTCTCTGCACCCTAAGCTAGCTGCTGGGGGCT ACGAGCGCCATCGGCGAGATCCGCTCTTTCTGTACAAGGTGCGAAGAAGT TCAACATAGGAACAACAAAGCTGGCAGGCAGGAAGGCACTCTGCCTGTCA CGGCACGCGCGTATTGATAGGAAAAAGTGGTGTTGCCGAAAAATCTAAAA GTGCTGCTTTCTGTGTGTACATATTTGTGCCCAGTTCACGGCTCTCATTA CGATAATCTGACACCAGATCTACTTCCATGCGAAAACAGACGGCACTCGT TTGCGAGTCCTGCTTCCTGGTCTACGCTGAACTGGCATCGCTGGCATTCC GGGCCACCGGTCGGCAGGCCCTCACGGATCACACACTCTCAACACAGTTC AGCGCCACACATCGATCACACACTCTCAGCCGCTTAAAACTGAGCGAGGA ATCGTGGCAACCGCTGCCAAAGAAAAAAAGCGCAACATTATTCGGACGGT CTGTGATCAGCTCCAACGTGCCTCAACAGGCATCACCAGAGCTACCGAAA ACACTACGCAGGTGCGAAGACGTGACGTGCCTAGGAATCACCCCGTCGAA CTAGGTGTTTTACTACATAGTTTTACTTTTCGTACAACAAATAAAATGTA ATATTGTAATACTCAAAATCGACGACGATAGTGGCATACTTGAACACGTA TTCGTGAGATTGTCTAAGCGTAACCCCGTAGAAGCCGTGGTCCAAAAAGC TGGTTGTCTACGCGACTATACTTCGTCAACAAGATCAGACGTATCACCTA CCTTTTATGGCGCGGTCTTGCTGACCTCGCAATGAGGGAAATAATAAATA TTTGTTCACAACAACCAACGAGACATGCGCCCTCCCTCATCTGCCGCAAC AGAGAAGAAGACGTGAGGAGGGAGGCGGGACTCGCGGTGCCAGGCTCCTC TCGTCACTCAAGCCTGGATGCTGTCATCCGTGCGCGAGAAGAGGCGTTTT TTCGCGAACTCGCTGCTGAAGAACACAAGTGCGCCCATCCATTGATGCAC ATGGTGGCGAGTTCACGAAAGCTTGCCAGCATTGGAGTGCCAGTTCATCA GCTGGACCCTCGGGCAGCAGTGAAGAAGTCGAAAAAAGCTGCAAAGACGA GCCCGTACGAGAAACCCCTCACGTTGGTGGTGCCGTATACGGGGCGAGTT GTTGCTCGTAGTCCTCACTTGCCGGCCCGGCAAAATACACAACCGTCTGG AAACCCTCAGGAAGAAGGCAGCAATGAAGACAAGGTGTTATCGTCTGAAA ATCGGCATCGACAGTTTCTTGACGAGACCCTGAGTGCTGTGCACGAGCAG CTAGAGTCAACGGCGCTGGCTGAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig4891:267..2390+

>mRNA_L-elsbetiae_contig4891.12813.1 ID=mRNA_L-elsbetiae_contig4891.12813.1|Name=mRNA_L-elsbetiae_contig4891.12813.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2334bp|location=Sequence derived from alignment at L-elsbetiae_contig4891:267..2390+ (Laminarionema elsbetiae ELsaHSoW15)
GTGAAAGTCTCATCAGAAGTCACCCTGCAGCAAGGCGCAGCACATCATCG
CGAAGAGATCAAAAACCCGACCGTCGGCAATTGCTCAAGTTGTGGCAAAA
CATCACCAGGCAGTAACTTCCATGCTGTGCACTACAAAACCATCATAGCC
CATTTTGAGCAGGTGAAAGTCTCATCAGAAGTCACCCTGCAGCAAGGCGC
AGCACATCATCGCGAAGAGATCAAAAACCCGACCGTCGGCAATTGCTCAA
GTTGTGGCAAAACATCACCAGGCAGTAACTTCCATGCTGTGCACTACAAA
ACCATCATAGCCCATTTTGAGCAGGTGGTTGATCTCGTCTCTTATGATCC
GGCGAATCGCAGCGGAGTTGTGGAATGGCCGCCGTCGGCAGAAATATTAG
AAGCAGCAGGTGGAGTCGGCTTCGGTGATATTCGTTTAATGGCTGACACC
GATCCGTCAAAGATTGCAACGGAAGATGTCATCATCCCGCCAGTTATCCG
CTCTCTGCACCCTAAGCTAGCTGCTGGGGGCTACGAGCGCCATCGGCGAG
ATCCGCTCTTTCTGTACAAGGTGGTTGATCTCGTCTCTTATGATCCGGCG
AATCGCAGCGGAGTTGTGGAATGGCCGCCGTCGGCAGAAATATTAGAAGC
AGCAGGTGGAGTCGGCTTCGGTGATATTCGTTTAATGGCTGACACCGATC
CGTCAAAGATTGCAACGGAAGATGTCATCATCCCGCCAGTTATCCGCTCT
CTGCACCCTAAGCTAGCTGCTGGGGGCTACGAGCGCCATCGGCGAGATCC
GCTCTTTCTGTACAAGACGGCACTCGTTTGCGAGTCCTGCTTCCTGGTCT
ACGCTGAACTGGCATCGCTGGCATTCCGGGCCACCGGTCGGCAGGCCCTC
ACGGATCACACACTCTCAACACAGTTCAGCGCCACACATCGATCACACAC
TCTCAGCCGCTTAAAACTGAGCGAGGAATCGTGGCAACCGCTGCCAAAGA
AAAAAAGCGCAACATTATTCGGACGGTCTGTGATCAGCTCCAACGTGCCT
CAACAGGCATCACCAGAGCTACCGAAAACACTACGCAGGTGCGAAGACGT
GACACGGCACTCGTTTGCGAGTCCTGCTTCCTGGTCTACGCTGAACTGGC
ATCGCTGGCATTCCGGGCCACCGGTCGGCAGGCCCTCACGGATCACACAC
TCTCAACACAGTTCAGCGCCACACATCGATCACACACTCTCAGCCGCTTA
AAACTGAGCGAGGAATCGTGGCAACCGCTGCCAAAGAAAAAAAGCGCAAC
ATTATTCGGACGGTCTGTGATCAGCTCCAACGTGCCTCAACAGGCATCAC
CAGAGCTACCGAAAACACTACGCAGGTGCGAAGACGTGACAGAAGAAGAC
GTGAGGAGGGAGGCGGGACTCGCGGTGCCAGGCTCCTCTCGTCACTCAAG
CCTGGATGCTGTCATCCGTGCGCGAGAAGAGGCGTTTTTTCGCGAACTCG
CTGCTGAAGAACACAAGTGCGCCCATCCATTGATGCACATGGTGGCGAGT
TCACGAAAGCTTGCCAGCATTGGAGTGCCAGTTCATCAGCTGGACCCTCG
GGCAGCAGTGAAGAAGTCGAAAAAAGCTGCAAAGACGAGCCCGTACGAGA
AACCCCTCACGTTGGTGGTGCCGTATACGGGGCGAGTTGTTGCTCGTAGT
CCTCACTTGCCGGCCCGGCAAAATACACAACCGTCTGGAAACCCTCAGGA
AGAAGGCAGCAATGAAGACAAGGTGTTATCGTCTGAAAATCGGCATCGAC
AGTTTCTTGACGAGACCCTGAGTGCTGTGCACGAGCAGCTAGAGTCAACG
GCGCTGGCTGAGAGAAGAAGACGTGAGGAGGGAGGCGGGACTCGCGGTGC
CAGGCTCCTCTCGTCACTCAAGCCTGGATGCTGTCATCCGTGCGCGAGAA
GAGGCGTTTTTTCGCGAACTCGCTGCTGAAGAACACAAGTGCGCCCATCC
ATTGATGCACATGGTGGCGAGTTCACGAAAGCTTGCCAGCATTGGAGTGC
CAGTTCATCAGCTGGACCCTCGGGCAGCAGTGAAGAAGTCGAAAAAAGCT
GCAAAGACGAGCCCGTACGAGAAACCCCTCACGTTGGTGGTGCCGTATAC
GGGGCGAGTTGTTGCTCGTAGTCCTCACTTGCCGGCCCGGCAAAATACAC
AACCGTCTGGAAACCCTCAGGAAGAAGGCAGCAATGAAGACAAGGTGTTA
TCGTCTGAAAATCGGCATCGACAGTTTCTTGACGAGACCCTGAGTGCTGT
GCACGAGCAGCTAGAGTCAACGGCGCTGGCTGAG
back to top