mRNA_L-elsbetiae_contig4878.12794.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE) HSP 1 Score: 540 bits (1392), Expect = 4.130e-184 Identity = 290/397 (73.05%), Postives = 327/397 (82.37%), Query Frame = 1 Query: 712 ELSESGHWDCVPFTVSVDGSATTPTPAPTAGSRDRVATTTAPASAAAPAPTTPAATSXXXXXXXXXXXXXXXXXXXXXXXGEPGSPGVPPVPVPPKTVCDPAAPLAFSYDPREELNADGEVEIEGSLVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEIT-ASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMH---DNHIYGFDPHDDSDYLTIRNNTVWN 1890 ELSE+G WDC PFTV+ D SA PTPAPT GSR+ +TTTAPA XXXXXXXXXXX XXXXX GEPGSPGVPP+PVP KTVCDPAA L+F+YD RE+ EIEGSLVTI H+SG+RTELGC TLTEMWQWLQ+GP+GVPTDLL PVDPAT IT AST+ +LTGVWL+RTSLAV+NGVT++LKGT+ GDCDELKIRSSPTLIHAVRGHGGNLD+YKT I+SWDE L H+L DS G+EPRSYIACSSEVVNE+DTCD G AR D GECRMD+VDSEL +MGY A+ESYGITWKVRGFC D +NPEVF++VNVYGD+TNC++HHMWYGMYSYGHQ GVWT++LMH DN++YGFDPHDDSDYLTIRNNTVWN Sbjct: 23 ELSENGPWDCAPFTVAADPSA--PTPAPTPGSREVPSTTTAPAXXXX---------XXXXXXXXXXXXVVTAXXXXXPATGEPGSPGVPPIPVPAKTVCDPAAELSFTYDAREDE------EIEGSLVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMNLKGTSVGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPEVFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRNNTVWN 402
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI) HSP 1 Score: 472 bits (1215), Expect = 9.020e-157 Identity = 221/291 (75.95%), Postives = 255/291 (87.63%), Query Frame = 1 Query: 1021 PLAFSYDPREELNADGEVEIEGSLVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEIT-ASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 1890 PL+F+YD RE+ EIEG+LVTI H+SG+RTELGC TLTEMWQWLQ+GP+GVPTDLL PVDPAT IT AST+ +LTGVWL+RTSLAV+NGVT++LKGT+ GDCDELKIRSS TLIHAVRGHGGNLD+YKT I+SWDE L H+L DS G+EPRSYIAC+SEVVNE+DTCD G AR D GECRMD+VDSEL +MGY A+ESYGITWKVRGFC D +NPEVF++VNVYGD+TNC++HHMWYGMYSYGHQ GVWT++LMHDN++YGFDPHDDSDYLTIRNNTVWN Sbjct: 50 PLSFTYDAREDE------EIEGALVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMNLKGTSVGGDCDELKIRSSTTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACTSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPEVFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRNNTVWN 334
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI) HSP 1 Score: 430 bits (1106), Expect = 9.440e-137 Identity = 344/736 (46.74%), Postives = 438/736 (59.51%), Query Frame = 1 Query: 22 VVSIPAPPLIAGESFTATWTLDAEQEMTTGDINVYTITLEPCASSTQSSCTCESEGNALAVSLCES-----CSDSDQSYDVEVPRDSAPGVYVVRVSLSEDPTSVFACSEGFTVQEEEVKEAGAPGIE--AGDTS-SGAYLRALEGQSASPGEAFTAKWYYDAGSDPEEXXXXGAGGSAGDFAVDLYSCAD-GGCAGGSCGTFVASLCGESGCYDPGTGDYDVVLPATVTPGAFSLFVAELSESGHWDCVPFTVSVDGSATTPTPAPTAGSRDRVATTTAPASAAAPAPTTPAATSXXXXXXXXXXXXXXXXXXXXXXXGEP-----------------GSPGVPPVPVPPKTVCDPAAPLAFSYDPREELNADGEVEIEGSLVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESD-TCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPE-VFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVETSRVMLTGNTLVENKWGARYTVGASDN 2145 VVS PA AGE+F ++ + TTGD+ + I L S ++ C G+ SLC CSDSD SYDV++P D+ G Y +++ L++D SV+AC++ F V + G G+ AG+ S S + A G AFT++W YD G GAGG G F ++L +C D G C G CGTF + GCYDPGTGDYDV +PA G + L V ++ C + V + P +PT D AP XXXXXXXXXXXXXXXXXXX EP GSPG PP PVP K VCD +A L+F Y + LVT+AH+SG+R+E GC TLT+++ WL T P VPT +L+ VD T+ + +T A TG+WL+ TS+ +TNGVT ++KGT+ GDCDELK S+ + + GHGGN+D+ T +RSWD H+L G RS+IAC SEVV ++D TCDG +A+ DMGECRMD+VDS ++Y GY+ TESYGITWKVRG C D +N + +F+ V VYGDM N +++ MWYG YSYGH GVWT+NLMHDNH+YGFDPHDDSDYLTI NT +N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+LVETS +++ N +N+WG R +G++ N Sbjct: 10 VVSTPANSKEAGETFGLSFAY-TDSGGTTGDLTSFDIELRS-HDSADATTGC---GDEALASLCTREAAGVCSDSDGSYDVQIPEDAEAGKYSIKIMLADDD-SVYACTDAFNV----TRPTGEDGLAILAGEASVSEVEVEAASSTYLEQGAAFTSRWVYDDGG--------GAGG--GTFEINLNACGDEGACENGGCGTFSTAXXXXXGCYDPGTGDYDVTVPADQAVGEYKLEVVSADDTDVSSCTASSFLVVEAGGAPAVSPTETPVDETP---------APXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSSSEPVAXXXXXXXXXXXXXXXGSPGFPPTPVPDKVVCDDSAELSFVYTLEDTKRP---------LVTVAHASGDRSEAGCLTLTKLYDWLATEPADVPTGMLLTVDSTTETAVNGTT-ATPTGIWLLDTSVVITNGVTFEIKGTSIGGDCDELKFSSTKKAWNRIMGHGGNIDIDSTVVRSWDASKTLDHILKDSDDGTTNRSFIACVSEVVVDADETCDG-TAQNDMGECRMDIVDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDMKNSDIYGMWYGHYSYGHLGGVWTDNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSNCVVSDNEFTDNRWGFRIILGSTGN 705
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE) HSP 1 Score: 422 bits (1086), Expect = 3.000e-129 Identity = 355/781 (45.45%), Postives = 437/781 (55.95%), Query Frame = 1 Query: 10 SISDVVSIPAPP--LIAGESFTATWTLDAEQEM--TTGDINVYTITLEPCASSTQSSCTC---ESEGNALAVSLCE-----SCSDSDQSYDVEVPRDSAPGVYVVRV------------SLSEDPTSVFACSEGFTVQEEEVKEAGAPGIEAGDTSSGAYLRALEGQSASPGEAFTAKWYYDAGSDPEEXXXXGAGGSAGDFAVDLYSCADGGCAGGSCGTFVASLCGESGCYDPGTGDYDVVLPATVTPGAFSLFVAELSE-----SGHWDCVPFTVSVDGSAT----TP-----------TPAPTAGSRDRVATTTAPASA------------------AAPAPTTPAATSXXXXXXXXXXXXXXXXXXXXXXXGEPGSPGVPPVPVPPKTVCDPAAPLAFSYDPREELNADGEVEIEGS----LVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANG-DCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSI-GEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPE-VFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVETSRVMLTGNTLVENKWGARYTVGASDN 2145 +++++ ++ AP L AG T W + TTGD+ + I L C C E GN ++LC+ +C DSD SYDV +P D G YV V S + D V CSE F V+E K+ A A S PG+AFTA+W Y+ G D E + G F V+L+SCAD C SCGT VA LCGE+GCYDPG GDYDV +PA TPG F L V +S S + V S S T TP TPAP S AA A P+ATS GE PG PP PVP + CDPAA +AFSY ++E S L+TI+H S +R E GC + +W+W++T V +LL P DP T E T A TGVWL+RTS+ VTNGV ++ GT A G D D++ + SSPT +RG GG+L Y+T + SW E LAPHMLP D+ G EPRSYI C SE++ E TCDG A+ + GECRMD+++S +SY+GYEATESYG++WKVRG C D +N + +FE V VYGD+ N +++ +WYG YSYGH GVWTNN MHDNH+YGFDPHDDSDYLTI NT +NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LVETS ++T NTL +NK+G R VG++DN Sbjct: 74 ALTEITNVAAPRSNLTAGTYHTVGWVYSTDTGAWGTTGDLRPFEIELRSCGGDDAQQAECGLGELCGNEY-LALCDLERGAACMDSDGSYDVLIPEDVDAGRYVFSVTHLGLSSWTSGASSTSDAGLVTGCSESFFVEEAAAKDVLA-------------TEAPAASSLQPGDAFTAEWEYE-GVDGE---------ANGRFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQVKRVSTDEEACSAEYFVVEAAASDSSSGTRAVSTPAXXXXXXXXXXTPAPVISSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEAAPVPSATSSATES------------------GE--IPGTPPTPVPLRVTCDPAAVVAFSY------------KLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDADVQ-ELLYPADPTTGEADTTGGAA--TGVWLLRTSVDVTNGVMFEVMGTEAEGGDSDKILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHMLPDDAEWGAEPRSYIGCLSEILEEGQTCDG-VAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCDDLSNKDTLFESVRVYGDIKNSDIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLVETSHTLVTENTLNDNKYGVRLVVGSNDN 794
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI) HSP 1 Score: 369 bits (948), Expect = 3.230e-114 Identity = 213/498 (42.77%), Postives = 275/498 (55.22%), Query Frame = 1 Query: 418 LRALEGQSASPGEAFTAKWYYDAGSDPEEXXXXGAGGSAGDFAVDLYSCADGGCAGGSCGTFVASLCGESGCYDPGTGDYDVVLPATVTPGAFSLFVAELSESGHWDCVPFTVSVDGSATTPTPAPTAGSRDRVATTTAPASAAAPAPTTPAATSXXXXXXXXXXXXXXXXXXXXXXXGEPGSPGVPPVPVPPKTVCDPAAPLAFSYDPREELNADGEVEIEGS----LVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANG-DCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSI-GEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPE-VFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 1890 + A S PG+AFTA+W Y+ G+D E + G+F V+L+SCAD C SCGT VA LCGE+GCYDPG GDYDV +PA TPG F L + PG PP PVPP+ CDPAA +AFSY ++E S L+TI+H S +R E GC + +W+W++ V +LL P DP T E T A TGVWL+RTS+ VTNGV ++ GT A G D D++ + SSPT +RG GG+L Y+T + SW E LAPH LP D+ G EPRSYI C SE++ E TCDG A+ + GECRMD+++S +SY+GYEATESYG++WKVRG C+D +N + +F+ V VYGD+ + +++ +WYG YSYGH G+WTNN MHDNH+YGFDPHDDSDYLTI NT +N Sbjct: 128 VEAPAASSLQPGDAFTAEWEYE-GADGE---------TNGNFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQI--------------------------------------------------------------------------------------PGTPPTPVPPRVTCDPAAVVAFSY------------KLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKAQDADVQ-ELLYPADPTTGEADTTGGAA--TGVWLLRTSVDVTNGVMFEVMGTQAEGGDSDKILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDG-VAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDLQDSDIYGLWYGHYSYGHLGGMWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYN 513
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 256 bits (653), Expect = 4.580e-74 Identity = 132/254 (51.97%), Postives = 165/254 (64.96%), Query Frame = 1 Query: 1132 GCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRS-SPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 1890 GC TL++++ W G + +D + TA+T TG WL+ L VT G TL +G G+C EL+IRS S + +RGHGGNL T + SWD P D RS+I C SEV+ DTC A +MGECRMD++DSE+ Y+GY+A+E+YGITWKVRGFCSD +NP+VF+DVNVYGDM ++HHM+YGMYS+GHQ GVWTNNLMHDNH YGFDPHDDSDYL I N V+N Sbjct: 10 GCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTT---TGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG-----RSFIRCVSEVLTGEDTC----AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYN 251
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 234 bits (598), Expect = 8.020e-66 Identity = 126/292 (43.15%), Postives = 180/292 (61.64%), Query Frame = 1 Query: 1030 FSYDPREELNADGEVEI----EGSLVTIAHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRS-SPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 1890 F P+ + ++ V + E + + I ++G RT GC TL ++W+ Q V L VDP + + ++T G WL+ + V +G+TL + G +A GD DEL++ S S T IH +R +GG+LD T + +WD AP +D RSYI+ SEV+ + G A+ +MGE RMD+ +SE++Y+GY TE+YG+TWKVRGFC DK NPE+F+DVNVYG++ + ++HH +G+Y+YGHQ G W N MHDN YGFDPHDDSD+LTI +N VWN Sbjct: 2 FGTSPKPDCDSSIAVSVRYNAESARLYIESANG-RTRGGCVTLEQIWE------QQVDGSPLYAVDPKSGDVSRSAT-----GTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIH-LRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG-----RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWN 275
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 231 bits (589), Expect = 9.360e-66 Identity = 114/205 (55.61%), Postives = 142/205 (69.27%), Query Frame = 1 Query: 1258 LTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSS-PTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTI 1869 +T WL+ + L VT+G G+ GDCDEL+I+S+ P + VRGHGG++ T + SWD P P E RS++ C SE + +TCDG A+ D GECRMD+++SE+ YMG+ ESYG+TWKVRGFC D +NP+VFE NVYGD+ N N+HHM+YGMYSYGHQ GVWTNN MHDNH YGFDPHDDSDYLTI Sbjct: 15 VTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQ-----ETYEGGRSFLNCVSEKLT-GETCDG-KAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTI 212
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 232 bits (591), Expect = 1.280e-65 Identity = 119/265 (44.91%), Postives = 165/265 (62.26%), Query Frame = 1 Query: 1099 IAHSSGNRTELGCATLTEMWQWLQ-TGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 1890 + + T GC TL ++W+ GP L VDP + T++T G WL+ L V +G+TL++ G+ A GD DEL++ S+ +R HGG+LD T + SWD +P D + RSYI+ SE++ + D G+A+ MGE RMD+ SE+ Y+GY +ESYG+TWKVRGFC DK+NPEVF+DVNVYG++ + ++HHM +G+Y+YGHQ G W N MHDN YGFDPHDDSD+LTI +N V+N Sbjct: 57 LESADNGTTRGGCVTLGQIWESRAGKGP-------LYAVDPDSGNVSTSAT-----GTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSP-----DEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYN 304
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 234 bits (598), Expect = 2.090e-65 Identity = 126/297 (42.42%), Postives = 179/297 (60.27%), Query Frame = 1 Query: 1015 AAPLAFSYDPREELNADGEVEIE----GSLVTI-AHSSGNRTELGCATLTEMWQWLQTGPQGVPTDLLVPVDPATDEEITASTLAQLTGVWLIRTSLAVTNGVTLDLKGTAANGDCDELKIRSSPTLIHAVRGHGGNLDVYKTHIRSWDEPALAPHMLPADSIGEEPRSYIACSSEVVNESDTCDGGSARFDMGECRMDLVDSELSYMGYEATESYGITWKVRGFCSDKTNPEVFEDVNVYGDMTNCNVHHMWYGMYSYGHQAGVWTNNLMHDNHIYGFDPHDDSDYLTIRNNTVWN 1890 AA A DP + + D ++E+ G+ + S+ T GCATL ++W+ + P L VDP + + T G WL+ L V +G+TL + GT GD DEL++ S+ +R HGG+LD T + SWD +P D + RSYI+ SE+V + D G+A+ MGE RMD+ +SE+ Y+G++ +ESYG+TWKVRGFC DK+NPE+F+DVNVYG+M + ++HH+ +G+Y+YGHQ G W N MHDN YGFDPHDDSD+LTI +N V+N Sbjct: 28 AADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWE---SRAGKAP---LYAVDPDSGDVSETET-----GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSP-----DEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYN 308 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4878.12794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4878.12794.1 >prot_L-elsbetiae_contig4878.12794.1 ID=prot_L-elsbetiae_contig4878.12794.1|Name=mRNA_L-elsbetiae_contig4878.12794.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=716bp MSLSISDVVSIPAPPLIAGESFTATWTLDAEQEMTTGDINVYTITLEPCAback to top mRNA from alignment at L-elsbetiae_contig4878:943..12457- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4878.12794.1 ID=mRNA_L-elsbetiae_contig4878.12794.1|Name=mRNA_L-elsbetiae_contig4878.12794.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11515bp|location=Sequence derived from alignment at L-elsbetiae_contig4878:943..12457- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4878:943..12457- >mRNA_L-elsbetiae_contig4878.12794.1 ID=mRNA_L-elsbetiae_contig4878.12794.1|Name=mRNA_L-elsbetiae_contig4878.12794.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4296bp|location=Sequence derived from alignment at L-elsbetiae_contig4878:943..12457- (Laminarionema elsbetiae ELsaHSoW15)back to top |