mRNA_L-elsbetiae_contig21439.6552.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig21439.6552.1
Unique NamemRNA_L-elsbetiae_contig21439.6552.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 1.150e-119
Identity = 174/228 (76.32%), Postives = 192/228 (84.21%), Query Frame = 1
Query:    1 MSFGVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEGAAAGTNPIAAAQKEVDAKLLPPTDDDSDVEL 684
            MSFGVQ+KSWCD REC LW+ +SWKLRPNNGSI++QR  ILVLDDFKCHKD+GFIA L + ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTA A  D +TGKL PPGRG V+TWCK AWA ITPE  KTCFKICGLTLALDGSEDHAWC HNFG+GY ELL+QQRVEW A+HP+VTLPPL LP VP  + A  N I AA KE++A LLP   DDSD+E+
Sbjct:  337 MSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTA--NHIEAAAKELEAGLLP-RGDDSDIEI 561          
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 8.180e-119
Identity = 170/228 (74.56%), Postives = 188/228 (82.46%), Query Frame = 1
Query:    1 MSFGVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEGAAAGTNPIAAAQKEVDAKLLPPTDDDSDVEL 684
            MSFGVQ+KSW D REC  W++ SWKLRPNNGSII+QR  ILVLDDFKCHK EGFIA L + ANTIVI IPGG TPLLQPLDRMLNKQMKRLLRG YTA++A+AVAD R+GKLKPP RG VSTWCK+AW  ITPE VKTCFKICGLTLALDGSEDHAWC HNFGE Y +LL++Q   W A+HPDVTLPPL LP VP G    +NPI AAQKEV+ KLLP   D+SD E+
Sbjct:    1 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGF--DSNPITAAQKEVEGKLLPYVADESDSEV 226          
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 1.500e-118
Identity = 173/228 (75.88%), Postives = 192/228 (84.21%), Query Frame = 1
Query:    1 MSFGVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEGAAAGTNPIAAAQKEVDAKLLPPTDDDSDVEL 684
            MSFGVQ+KSWCD RE  LW+ +SWKLRPNNGS+++QR  ILVLDDFKCHKD+GFIA L + ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTA A  D +TGKL PPGRG V+TWCK AWA ITPE VKTCFKICGLTLALDGSEDHAWC HNFG+GY ELL+QQRVEW A+HP+VTLPPL LP VP  + A  N I AA KE++A LLP   DDSD+E+
Sbjct:  330 MSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTA--NHIEAAAKELEAGLLP-RGDDSDIEI 554          
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 2.610e-116
Identity = 183/255 (71.76%), Postives = 203/255 (79.61%), Query Frame = 1
Query:    1 MSFGVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEGAAAGTNPIAAAQKEVDAKLLPPTDDDSD--VELLEXXXXXXFLG--GGGGGVEEEIEL 753
            MSFGVQ+KSW D REC  W++ SWKLRPNNGSI++QRP ILVLDDFKCHKDEGFIA L + ANTIVI IPG LTPLLQPLDRMLNKQMKRLLR  YTA++A+AVAD R+GKLKPP RG VSTWCK+AW   TPE VKTCF ICGLTLALDGSEDHAWC HNFGE Y +LL++QR  W A+H DVTLPPL LP VP G    +NPI AAQKEV+ KLLP   D+SD  VE+LE XXXXX     GGGG   E +EL
Sbjct:  217 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGGF--DSNPITAAQKEVEGKLLPYVADESDSEVEVLEGXXXXXXXXXQGGGGAEGEVVEL 469          
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 1.060e-115
Identity = 179/255 (70.20%), Postives = 202/255 (79.22%), Query Frame = 1
Query:    1 MSFGVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEGAAAGTNPIAAAQKEVDAKLLPPTDDDSD--VELLEXXXXXXFLG--GGGGGVEEEIEL 753
            MSFGVQ+KSW D REC  W++ SWKLRPNNGSI++QRP ILVLDD KCHK EGFIA L + ANT+VI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA++ +AVAD R+GKLKPP RG VSTWCK+AW  ITPE VK+CFKICGLTLALDGSEDHAWC H+FGE   +LL++Q   W A+HPDVTLPPL LP VP G    +NPI AAQKEV+ KLLP   D+SD  VE+LE XXXXX     GGGG     +EL
Sbjct:   98 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGF--DSNPITAAQKEVEGKLLPYVADESDSEVEVLEGXXXXXXXXXQGGGGAEGNVVEL 350          
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 6.250e-115
Identity = 170/225 (75.56%), Postives = 188/225 (83.56%), Query Frame = 1
Query:   10 GVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEGAAAGTNPIAAAQKEVDAKLLPPTDDDSDVEL 684
            GVQ+KSWCD REC LW+ +SWKLRPNNGSI++QR  ILVLDDFKCHKD+GFIA L K ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTA+TA A  D +TG L PPGRG V+TWCK AWA ITPE VKTCFKICGLTLALDGSEDHAWC HNFG+GY ELL+QQRVEW A+HP+VTLP L LP VP  + A  N I AA KE++A LLP   DDSD+E+
Sbjct:  370 GVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVPAESTA--NHIEAAAKELEAGLLP-CGDDSDIEI 591          
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 2.950e-114
Identity = 169/252 (67.06%), Postives = 193/252 (76.59%), Query Frame = 1
Query:    1 MSFGVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEGAAAGTNPIAAAQKEVDAKLLPPTDDDS--DVELLEXXXXXXFLGG-GGGGVEEEI 747
            MSFGVQ+KSW D REC  W++ SWK RPNNGSI++QRP ILVLDDFKC KDEGFIA L + ANTI I IPGGLTPLLQPLDR+LNKQMKR+LRG YTA++A+AVAD R+GKLKPP RG VSTWC +AW  I PE VKTCFKICGLTLALDG EDHAW  HNFGE Y +LL++Q   W A+HPD TLPPL LP VP G     NPI  AQKEV+ KL+P   D+S  +VE+LE       + G GGGG E E+
Sbjct:    1 MSFGVQEKSWSDQRECNGWISGSWKFRPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVPGGF--DFNPITGAQKEVEEKLMPYVADESASEVEVLEGDSDVEVVEGQGGGGAEGEV 250          
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 3.330e-112
Identity = 162/218 (74.31%), Postives = 182/218 (83.49%), Query Frame = 1
Query:    1 MSFGVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEGAAAGTNPIAAAQKEVDAKLLP 654
            MSFGVQ+KSW D REC  W + SWKLRPNNGSI++QRP ILVLDDFKCHKDEGFIA L + ANTIVI IPGGLTPLLQPLD  LNKQMKRLLRG +TA++++AVAD R+GKLKPP RG VSTWCK+ W  ITPE VKTCFKICGLTLALDGSEDHAWC+HNFGE Y +LL++Q   W A+HP+VTLPPL LP VP G    +NPI AAQKEV+ KLLP
Sbjct:   62 MSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGGF--DSNPITAAQKEVEGKLLP 275          
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 4.360e-110
Identity = 180/285 (63.16%), Postives = 201/285 (70.53%), Query Frame = 1
Query:    1 MSFGVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEG---------------------------------AAAGTNPIAAAQKEVDAKLLP--PTDDDSDVELLEXXXXXXFLGG-GGGGVEEEI 747
            MSFGVQ+KSW D REC  W + SWKLRPNNGSI++QRP ILVLDDFKCHKDEGFIA L + ANTIVI IPGGLTPLLQPLDRMLNKQ KRLLR  YTA++A+A  D R+GKLKPP RG VSTWCK AW  ITPE VKTCFKICGLTLALDGSEDHAWC+HNFGE Y +LL++Q   W A+HP+VTLPPL LP VP                                       +NPI AAQKEV+ KLLP  P + DS+VE+LE XXXXX     GGGG E E+
Sbjct:  151 MSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASAT-DARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDSNPIMAAQKEVEGKLLPYVPDESDSEVEVLEGXXXXXXXXXQGGGGAEGEV 434          
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 7.240e-108
Identity = 163/228 (71.49%), Postives = 181/228 (79.39%), Query Frame = 1
Query:    1 MSFGVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEGAAAGTNPIAAAQKEVDAKLLPPTDDDSDVEL 684
            MSFGVQ+KSWCD REC LW+  SWKLRPNNGSI++QR  ILVLDDFKCHKD+GFIA L + ANTIVI IPGGLTPLLQ LDRMLNKQMKRLL               +TGKL PPGRG V+TWCK AWA ITPE VKTCFKICGLTLALDGSEDHAWC HNFG+GY ELL+QQRVEW A+HP+VTLPPL LP VP  + A  N I AA KE++A+LLP   DDSD+E+
Sbjct:  342 MSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTA--NHIEAAAKELEAELLP-RGDDSDIEI 566          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21439.6552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRZ1_9PHAE1.150e-11976.32DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JBJ7_9PHAE8.180e-11974.56DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE1.500e-11875.88DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE2.610e-11671.76DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KQK9_9PHAE1.060e-11570.20DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KYG9_9PHAE6.250e-11575.56DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L8W0_9PHAE2.950e-11467.06DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5J8R4_9PHAE3.330e-11274.31DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE4.360e-11063.16DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE7.240e-10871.49DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig21439contigL-elsbetiae_contig21439:1171..1926 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.9
Seed ortholog evalue4.9e-41
Seed eggNOG ortholog2880.D7FXD3
Preferred namePOGK
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA binding
EggNOG OGsKOG3105@1,KOG3105@2759
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-02_005760.1
Exons1
Model size756
Cds size756
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815876.1062322-CDS-L-elsbetiae_contig21439:1170..19261622815876.1062322-CDS-L-elsbetiae_contig21439:1170..1926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig21439 1171..1926 +
1691683161.8444502-CDS-L-elsbetiae_contig21439:1170..19261691683161.8444502-CDS-L-elsbetiae_contig21439:1170..1926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig21439 1171..1926 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig21439.6552.1prot_L-elsbetiae_contig21439.6552.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig21439 1171..1926 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig21439.6552.1

>prot_L-elsbetiae_contig21439.6552.1 ID=prot_L-elsbetiae_contig21439.6552.1|Name=mRNA_L-elsbetiae_contig21439.6552.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
MSFGVQDKSWCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHK
DEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHT
ATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALD
GSEDHAWCSHNFGEGYPELLQQQRVEWEAQHPDVTLPPLHLPVVPEGAAA
GTNPIAAAQKEVDAKLLPPTDDDSDVELLEDDSDVEFLGGGGGGVEEEIE
L*
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mRNA from alignment at L-elsbetiae_contig21439:1171..1926+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig21439.6552.1 ID=mRNA_L-elsbetiae_contig21439.6552.1|Name=mRNA_L-elsbetiae_contig21439.6552.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=756bp|location=Sequence derived from alignment at L-elsbetiae_contig21439:1171..1926+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGTTTGGAGTGCAGGATAAGAGCTGGTGCGACGCGCGGGAGTGCAC CCTGTGGCTCACGGAGAGCTGGAAGCTGCGCCCCAACAACGGCAGCATCA TCAAGCAGCGACCAAGCATCTTGGTCTTGGACGACTTCAAGTGCCACAAA GACGAGGGTTTCATCGCCGACCTCCTGAAGAGAGCCAACACCATCGTCAT CCTGATCCCGGGCGGTCTGACTCCTCTGCTCCAGCCGCTGGACCGCATGC TCAACAAGCAGATGAAGCGGCTGCTGCGGGGGATGTACACCGCCCACACC GCCACAGCGGTCGCCGACACCAGGACGGGCAAGCTGAAGCCGCCGGGACG TGGGCAGGTGTCGACGTGGTGCAAGCAGGCGTGGGCACAGATCACTCCGG AGCTGGTCAAGACTTGCTTCAAGATCTGCGGGCTCACGCTTGCTCTCGAT GGCAGCGAGGACCACGCCTGGTGCTCGCACAACTTCGGCGAAGGCTACCC CGAGCTCCTCCAGCAGCAGCGCGTCGAGTGGGAGGCACAGCACCCCGACG TCACCCTGCCCCCGCTCCACCTGCCAGTGGTACCAGAGGGCGCGGCGGCC GGCACCAACCCCATCGCGGCCGCACAGAAGGAGGTGGACGCGAAGCTGCT ACCCCCCACGGACGACGACAGCGATGTGGAGCTGCTGGAAGATGACAGCG ATGTGGAGTTCTTGGGTGGTGGCGGGGGGGGAGTAGAGGAAGAGATTGAG CTGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig21439:1171..1926+

>mRNA_L-elsbetiae_contig21439.6552.1 ID=mRNA_L-elsbetiae_contig21439.6552.1|Name=mRNA_L-elsbetiae_contig21439.6552.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1512bp|location=Sequence derived from alignment at L-elsbetiae_contig21439:1171..1926+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGTTTGGAGTGCAGGATAAGAGCTGGTGCGACGCGCGGGAGTGCAC
CCTGTGGCTCACGGAGAGCTGGAAGCTGCGCCCCAACAACGGCAGCATCA
TCAAGCAGCGACCAAGCATCTTGGTCTTGGACGACTTCAAGTGCCACAAA
GACGAGGGTTTCATCGCCGACCTCCTGAAGAGAGCCAACACCATCGTCAT
CCTGATCCCGGGCGGTCTGACTCCTCTGCTCCAGCCGCTGGACCGCATGC
TCAACAAGCAGATGAAGCGGCTGCTGCGGGGGATGTACACCGCCCACACC
GCCACAGCGGTCGCCGACACCAGGACGGGCAAGCTGAAGCCGCCGGGACG
TGGGCAGGTGTCGACGTGGTGCAAGCAGGCGTGGGCACAGATCACTCCGG
AGCTGGTCAAGACTTGCTTCAAGATCTGCGGGCTCACGCTTGCTCTCGAT
GGCAGCGAGGACCACGCCTGGTGCTCGCACAACTTCGGCGAAGGCTACCC
CGAGCTCCTCCAGCAGCAGCGCGTCGAGTGGGAGGCACAGCACCCCGACG
TCACCCTGCCCCCGCTCCACCTGCCAGTGGTACCAGAGGGCGCGGCGGCC
GGCACCAACCCCATCGCGGCCGCACAGAAGGAGGTGGACGCGAAGCTGCT
ACCCCCCACGGACGACGACAGCGATGTGGAGCTGCTGGAAGATGACAGCG
ATGTGGAGTTCTTGGGTGGTGGCGGGGGGGGAGTAGAGGAAGAGATTGAG
CTGTGAATGTCGTTTGGAGTGCAGGATAAGAGCTGGTGCGACGCGCGGGA
GTGCACCCTGTGGCTCACGGAGAGCTGGAAGCTGCGCCCCAACAACGGCA
GCATCATCAAGCAGCGACCAAGCATCTTGGTCTTGGACGACTTCAAGTGC
CACAAAGACGAGGGTTTCATCGCCGACCTCCTGAAGAGAGCCAACACCAT
CGTCATCCTGATCCCGGGCGGTCTGACTCCTCTGCTCCAGCCGCTGGACC
GCATGCTCAACAAGCAGATGAAGCGGCTGCTGCGGGGGATGTACACCGCC
CACACCGCCACAGCGGTCGCCGACACCAGGACGGGCAAGCTGAAGCCGCC
GGGACGTGGGCAGGTGTCGACGTGGTGCAAGCAGGCGTGGGCACAGATCA
CTCCGGAGCTGGTCAAGACTTGCTTCAAGATCTGCGGGCTCACGCTTGCT
CTCGATGGCAGCGAGGACCACGCCTGGTGCTCGCACAACTTCGGCGAAGG
CTACCCCGAGCTCCTCCAGCAGCAGCGCGTCGAGTGGGAGGCACAGCACC
CCGACGTCACCCTGCCCCCGCTCCACCTGCCAGTGGTACCAGAGGGCGCG
GCGGCCGGCACCAACCCCATCGCGGCCGCACAGAAGGAGGTGGACGCGAA
GCTGCTACCCCCCACGGACGACGACAGCGATGTGGAGCTGCTGGAAGATG
ACAGCGATGTGGAGTTCTTGGGTGGTGGCGGGGGGGGAGTAGAGGAAGAG
ATTGAGCTGTGA
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