mRNA_L-elsbetiae_contig2142.6548.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2142.6548.1
Unique NamemRNA_L-elsbetiae_contig2142.6548.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Match: A0A6H5KMQ7_9PHAE (PlsC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMQ7_9PHAE)

HSP 1 Score: 451 bits (1159), Expect = 6.830e-157
Identity = 202/266 (75.94%), Postives = 239/266 (89.85%), Query Frame = 2
Query:  128 QEMLNTLCQTWFAVCMTGGMVIDWAGCSIITALLPAGESQKRCCQFCHLIFRWFLIGSCPWIRVSRPPAEDVTRLLDRGRVCLLMNHTSFGDSILFVGTTPSSIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQSKDENSFTVDKPEQAKIMEKVKAHVESNGCLCLFPEGKINRNPAVLCPFRRGTFGMVEEMDMAVVTLTTVGCNDSWPRESPVGGRPATILMKLTEVAGAGHGLSATTIQEKAEASMQADVTSLLREREA 925
            ++ +   C TWF  C+T G++IDWAGC +IT +LP G++Q+RCCQ+ H +FR F++ SCPWIRVSRPP E+VTRLL+R RVC+LMNHTSFGDS++FV TTPS+IIWRYRTLMK TLFDWPFLGG+CRMVGHFPVLF+SKDENSF VDKPEQAKIMEKVKAHVES+GCLCLFPEGKINRNPAVLCPFRRGTFG+ EEM+MAVV+LTTVGC++SWPRESPVGG PA I+++LTE+A AGHGL+A  +QEKAEASMQADVTSLL+ R+A
Sbjct:    3 RQAVKLACHTWFGACLTWGLIIDWAGCVVITTILPDGQAQRRCCQWSHYVFRCFMLSSCPWIRVSRPPVEEVTRLLNRERVCVLMNHTSFGDSVMFVATTPSNIIWRYRTLMKSTLFDWPFLGGVCRMVGHFPVLFRSKDENSFAVDKPEQAKIMEKVKAHVESDGCLCLFPEGKINRNPAVLCPFRRGTFGVAEEMNMAVVSLTTVGCDESWPRESPVGGLPARIVIRLTEIAEAGHGLTAAALQEKAEASMQADVTSLLQARDA 268          
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Match: A0A835Z6S5_9STRA (Acyltransferase-like protein, copy 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S5_9STRA)

HSP 1 Score: 254 bits (649), Expect = 1.930e-79
Identity = 120/272 (44.12%), Postives = 170/272 (62.50%), Query Frame = 2
Query:  134 MLNTLCQTWFAVCMTGGMVIDWAGCSIITALLPAGESQK--RCCQFCHLIFRWFLIGSCPWIRVSRPPAEDVTRLLDRGRVCLLMNHTSFGDSILFVGTTPSSIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQSKDENSFTVDKPEQAKIMEKVKAHVESNGCLCLFPEGKINRNPAVLCPFRRGTFGMVEEMDMAVVTLTTVGCNDSWPRESPVGGRPATILMKLTEVAGAGHGLSATTIQEKAEASMQADVTSLLREREACGSKSK 943
            +L+T+C+ WF  C     ++ WAGC ++  ++P    QK  R C  CH  FR+ ++  CPWIR+  PPAE+  R+L R RV + +NHTSF DS+LFV   P  +++RYRTLMK+ L + P LGGI    GHFPV F +  E  F+VDK   A +ME V+AHV   GCL +FPEG++NR+P  L PFR  +  +  +  MAV T+T +G    WPR S +GG P  I ++LTEVA   HGL A  ++++A+A+MQ D+ ++  E  A    +K
Sbjct:    5 VLHTVCKFWFGTCTLVCFILTWAGCMVLRYIVPGTLQQKEARVCTLCHYTFRYMIMLPCPWIRLKVPPAEEWRRILGRDRVFVALNHTSFMDSVLFVACVPGDVLYRYRTLMKKELLELPLLGGISACAGHFPVHFLTPREEEFSVDKMIMAGVMELVRAHVARGGCLSIFPEGRVNRSPDTLLPFRNSSLAIAADEGMAVATMTQLGNAACWPRASAMGGVPCAIRVRLTEVAPHAHGLDAAALRDRAQAAMQKDLDAMNAEAAAAAKGAK 276          
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Match: A0A3R7PX57_9TRYP (Acyltransferase n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A3R7PX57_9TRYP)

HSP 1 Score: 127 bits (319), Expect = 2.730e-30
Identity = 70/223 (31.39%), Postives = 111/223 (49.78%), Query Frame = 2
Query:  152 QTWFAVCMTGGMVIDWAGCSIITALLPAGESQKRCCQFCHLIFRWFLIGSCPWIRVSRPPAEDVTRLLD----RGRVCLLMNHTSFGDSILFVGTTPSSIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQSKDENSFTVDKPEQAKIMEKVKAHVESNGCLCLFPEGKINRNPAVLCPFRRGTFGMVEEMDMAVVTLTTVGCNDSW-PRESPVGGRPATI 805
            + WF++C+   +V+ +A C+ +         + R C+    IF    +G   W          +   LD      +  +   HTSF D++LF+   P S +   +   K+ L+  P +GG+ R  GHFPV F S+DENSF VD+ +QA +M +V+  ++  G +C FPEG +NR P  L  FR GTF M+ +  M +  +   G  + W P    + G PA +
Sbjct:   26 RAWFSLCLVLLVVMTFALCAPLRLAADKKIIKARSCEKLSCIFSGIFLGKALWWLSPHIHVRFLEGSLDWRAIESKGAVGACHTSFFDTLLFLWLCPLSFLANCKAFAKKALWKMPLMGGVIRACGHFPVHFNSQDENSFAVDREKQALVMAEVETFLDQGGVICFFPEGVLNRTPETLKDFRIGTFSMLTKRHMPIHYMVYSGSQEVWDPTMKGLPGFPADV 248          
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Match: S9W582_9TRYP (Acyltransferase, putative n=1 Tax=Angomonas deanei TaxID=59799 RepID=S9W582_9TRYP)

HSP 1 Score: 127 bits (320), Expect = 3.690e-30
Identity = 63/145 (43.45%), Postives = 86/145 (59.31%), Query Frame = 2
Query:  380 MNHTSFGDSILFVGTTPSSIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQSKDENSFTVDKPEQAKIMEKVKAHVESNGCLCLFPEGKINRNPAVLCPFRRGTFGMVEEMDMAVVTLTTVGCNDSWPRESPVGGRPATILMK 814
            +NHTSF D  + +   P S +   RTLMK +L D P  GG    VGHFPV F+S ++ +F VDK  QA +   V  H+E+ G L +FPEG +N+N AVL PFR GTF  + E  M +  + +VG   +WP +   GG PA I ++
Sbjct:  129 LNHTSFWDVFMLIQIMPLSYLLETRTLMKASLRDIPIFGGCFDRVGHFPVFFKSDEDGNFQVDKERQAAVQVHVNQHIENGGNLAIFPEGAVNKNTAVLKPFRFGTFATIFEHKMPLYYVVSVGNEKTWPPQCVSGGFPADIRVR 273          
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Match: A0A0M9G1R4_9TRYP (Putative mitochondrial acyltransferase n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9G1R4_9TRYP)

HSP 1 Score: 127 bits (318), Expect = 4.430e-30
Identity = 75/259 (28.96%), Postives = 125/259 (48.26%), Query Frame = 2
Query:   50 CCLKLLRPVCGEISKYKEVLSSRLAIQEMLNTLCQTWFAVCMTGGMVIDWAGCSIITAL------LPAGESQKRCCQFCHLIFRWFLIGSCPWIRVSRPPAEDVTRLLDRGRVCLLMNHTSFGDSILFVGTTPSSIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQSKDENSFTVDKPEQAKIMEKVKAHVESNGCLCLFPEGKINRNPAVLCPFRRGTFGMVEEMDMAVVTLTTVGCNDSW-PRESPVGGRPATI 805
            CCL ++  + G +          L  +++   + + WF V +   +++   GC + + L      +P G +Q       H++F++F   + P +     P      +L  G VC    H SF D +LF+ T P S +WR  T  K +L + P  G + +  G+FPV F +++  SF V+K +QA ++  V+A +     +C FPEG +NR+PAVL  FR G+F M+      +      G ++ W P    + G PA I
Sbjct:    3 CCLSVVGALYGAMYLL-------LRERKLPTVVMRVWFTVHLFVSLIVVNVGCHVFSFLTSPLHVMPIGTAQALSRSLKHVVFKYFFAPAIPHVHRVEMPGSLPFSVLKSGAVCAC--HCSFFDPLLFLFTAPLSFLWRGATFFKSSLLNLPLFGYVLKCTGYFPVYFANENSPSFHVNKEKQAAVVADVEAWLGKGNNMCFFPEGVMNRDPAVLTDFRLGSFNMILAHKTPLYYFVFYGDHEVWSPSWKGLPGFPADI 252          
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Match: A0A0N1IKX5_LEPSE (PlsC domain-containing protein n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1IKX5_LEPSE)

HSP 1 Score: 113 bits (283), Expect = 4.170e-25
Identity = 72/230 (31.30%), Postives = 120/230 (52.17%), Query Frame = 2
Query:  152 QTWFAVCMTGGMVIDW-AGCSIITA-----LLPAGESQ--KRCCQFCHLIFRWFLIGSCPWIRVSRPPAE-DVTRLLDRGRVCLLMNHTSFGDSILFVGTTPSSIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQSKDENSFTVDKPEQAKIMEKVKAHVESNGCLCLFPEGKINRNPAVLCPFRRGTFGMVEEMDMAVVTLTTVGCNDSW-PRESPVGGRPATILM 811
            +TW+ + +   +++ W AG  ++ A     LL    +Q  +RC   C   F ++L  + P I V   P    ++ + ++  +CL   HTSF D++L +   P   I++ +T  K +L   P  G +    GHFPV F S+++N F+VDK +QA +  +V+  ++  G L  FPEG +NR P VL  FR G+F  +    +A+    T G ++ W P  + + G PA + M
Sbjct:   31 RTWYTIHLVLCVLLSWFAGTVLVFAERKLHLLSKSTAQSLERC--VCATTFGYWLRFNSPHIHVHWMPGSLPLSSITEQHDLCLC--HTSFFDTMLHLWYVPYRYIYKAKTFAKASLRKLPLFGTVIVACGHFPVYFNSEEQNVFSVDKGKQAAVAAEVEEWLDQGGSLSFFPEGALNRTPEVLKDFRLGSFNTILSRKLALYYCVTYGNHEVWNPSLTGLPGYPANVYM 256          
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Match: G0TTG1_TRYVY (Putative acyltransferase n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0TTG1_TRYVY)

HSP 1 Score: 112 bits (281), Expect = 7.110e-25
Identity = 73/225 (32.44%), Postives = 104/225 (46.22%), Query Frame = 2
Query:  158 WFAVCMTGGMVIDWAGCSIITALLPAGESQKRCCQFCHLIFRWFLIGSC-----PWIRVS-RPPAEDVTRLLDRGRVCLLMNHTSFGDSILFVGTTPSSIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQSKDENSFTVDKPEQAKIMEKVKAHVESNGCLCLFPEGKINRNPAVLCPFRRGTFGMVEEMDMAVVTLTTVGCNDSWPRE-SPVGGRPATILM 811
            WF++C+   +V  +  C  + A        KR  +    +  + L+G       P IRV     +  +    D G +C    HTSF D++LF+       + R + L K  L+  P LG +    GH PV F S D +SF VDK +QA I       + S G LC+FPEG +NR P VL  FR GTF ++      V  +   GC+  WP     + G PA I +
Sbjct:   32 WFSMCILLVIVPAYIVCGAVNAAAKMNWMSKRRSESISCVVSYLLLGKVLLTLSPHIRVKVMKQSLGIKDFQDGGVMCAC--HTSFFDTLLFLSLASLQYMHRAKALAKSALWKVPLLGTVVEACGHLPVYFTSPDVDSFGVDKEKQAVISVITDEFLTSQGNLCIFPEGVMNRTPEVLRDFRFGTFNLILRHGARVYYMAHCGCDRVWPPSLKGLPGFPADIYV 254          
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Match: A0A7S1B2B3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1B2B3_NOCSC)

HSP 1 Score: 91.3 bits (225), Expect = 7.290e-17
Identity = 71/230 (30.87%), Postives = 104/230 (45.22%), Query Frame = 2
Query:  299 SCPWIRVSRPPAEDVTRLLD----RGRVCLLMNHTSFGDSILFVGTTPSSIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQS--KDENSFTVDKPEQAKIMEKVKAHVESNGCLCLFPEGKINR-NPAVLCPFRRGTFGMVEEMDMAVVTLTTVGCNDSWPRESPVGGRPATILMKLTEVAGAGHGL----------------SATTIQEKAEASMQADVTSLLRER 919
            SC WIRV      D    +     R R+ +LMNH+SF DSI+ +   P S     + L    +F  P  G + R +GH PV F     D + F+VD  E      K +  V S      FPEG+++  +P  L  FR G F +   +D  V  +  VG +D WP +   GG PA+I  K+ + + + H L                +   + +  ++ MQA + SL RER
Sbjct:  114 SC-WIRVHTEGLADFRAGMSNNDMRPRI-ILMNHSSFTDSIMAMCNLPMSGCSNVKILAASRIFKMPLFGTMMRGMGHVPVPFTEGLTDRDDFSVDVAEMEVSGRKFEEWVASGNVGAWFPEGRLSYGDPMQLQQFRAGGFTVAYRVDCEVWMMVNVGNSDCWPAQETFGGYPASIRYKMYKFSSSTHDLLTENGFIIGNPDTERGATIFLADTLQSEMQAQMNSLDRER 341          
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Match: A0A4R3DXA7_9HYPH (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Bosea sp. BK604 TaxID=2512180 RepID=A0A4R3DXA7_9HYPH)

HSP 1 Score: 58.5 bits (140), Expect = 4.050e-6
Identity = 50/200 (25.00%), Postives = 93/200 (46.50%), Query Frame = 2
Query:  158 WFAVCMTGGMVIDWAGCSIITALLPAGESQKRCCQ---FCHLIFRWFLIGSCPWIRVSRPPAEDVTRLLDRGRVCLLMNHTSFGDSILFVGTTPSSIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQSKDENSFTVDKPEQAKIMEKVKAHVESNGCLCLFPEGKINRNPAVLCPFRRG--TFGMVEEMDMAVVTLT 742
            +FA+   GG VI      I++  L    +++R  +     HL+FR F IG   ++R++      + +L D     ++ NH S  D +L +     S+I R + ++KQ L++ P+LG + R  G+      S+             +++   +  +E + CL +FPEG     P      +RG     ++  +D+ +VT+T
Sbjct:   17 FFAILFGGGAVIATIAFPIVS--LTTRNTERRWARKQYIIHLLFR-FYIGLMRFMRLAFFEFRGLEKLRDAPGKLVIANHPSLLDVVLLM-----SLIPRAQCIVKQELWESPYLGRLVRGAGYISNALPSE-------------QLLAACRQAIELDACLIVFPEGT-RSTPGAPIQLQRGFANIALLLGLDIQLVTIT 194          
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Match: A0A5C1B3S1_9HYPH (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Bosea sp. F3-2 TaxID=2599640 RepID=A0A5C1B3S1_9HYPH)

HSP 1 Score: 55.8 bits (133), Expect = 3.790e-5
Identity = 51/198 (25.76%), Postives = 87/198 (43.94%), Query Frame = 2
Query:  158 WFAVCMTGGMVIDWAGCSIITALLPAGESQKRCCQFC-HLIFRWFLIGSCPWIRVSRPPAEDVTRLLDRGRVCLLMNHTSFGDSILFVGTTPSSIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQSKDENSFTVDKPEQAKIMEKVKAHVESNGCLCLFPEGKINRNPAVLCPFRRG--TFGMVEEMDMAVVTLT 742
            +FA    GG VI      I+         ++   Q+  HL+FR + IG+    R++    +   RL D     L+ NH S  D ++ +   P S     + ++KQ+L+D P+LG + R VG+          N+   D+     ++   +  VE   CL +FPEG     P      +RG     ++  +D+ + T+T
Sbjct:   17 FFAALFGGGAVIATLIFPIVNLTTREARVRRDRKQYLIHLLFRSY-IGAMRLARLASFDFQGRERLRDAPGRMLVANHPSLLDVVMLMALIPRS-----QCIVKQSLWDSPYLGRLVRGVGYI--------SNALPSDR-----LLRACRESVEEGKCLIIFPEGT-RSTPGEPMQLQRGFANIALLLGIDIQLATIT 194          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2142.6548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KMQ7_9PHAE6.830e-15775.94PlsC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z6S5_9STRA1.930e-7944.12Acyltransferase-like protein, copy 2 n=1 Tax=Tribo... [more]
A0A3R7PX57_9TRYP2.730e-3031.39Acyltransferase n=1 Tax=Trypanosoma conorhini TaxI... [more]
S9W582_9TRYP3.690e-3043.45Acyltransferase, putative n=1 Tax=Angomonas deanei... [more]
A0A0M9G1R4_9TRYP4.430e-3028.96Putative mitochondrial acyltransferase n=1 Tax=Lep... [more]
A0A0N1IKX5_LEPSE4.170e-2531.30PlsC domain-containing protein n=1 Tax=Leptomonas ... [more]
G0TTG1_TRYVY7.110e-2532.44Putative acyltransferase n=1 Tax=Trypanosoma vivax... [more]
A0A7S1B2B3_NOCSC7.290e-1730.87Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A4R3DXA7_9HYPH4.050e-625.001-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A5C1B3S1_9HYPH3.790e-525.761-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2142contigL-elsbetiae_contig2142:5959..8455 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score442.6
Seed ortholog evalue1.4e-121
Seed eggNOG ortholog2880.D7FWP2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Acyltransferase
EggNOG OGs2DZHH@1,2S71D@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionPhospholipid/glycerol acyltransferase
Ec32 orthologEc-06_001400.1
Exons3
Model size1149
Cds size819
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2142.6548.1prot_L-elsbetiae_contig2142.6548.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2142 6092..8258 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815875.8219142-UTR-L-elsbetiae_contig2142:5958..60911622815875.8219142-UTR-L-elsbetiae_contig2142:5958..6091Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2142 5959..6091 +
1691683161.6818259-UTR-L-elsbetiae_contig2142:5958..60911691683161.6818259-UTR-L-elsbetiae_contig2142:5958..6091Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2142 5959..6091 +
1622815875.8811622-UTR-L-elsbetiae_contig2142:8258..84551622815875.8811622-UTR-L-elsbetiae_contig2142:8258..8455Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2142 8259..8455 +
1691683161.7318218-UTR-L-elsbetiae_contig2142:8258..84551691683161.7318218-UTR-L-elsbetiae_contig2142:8258..8455Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2142 8259..8455 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815875.8369083-CDS-L-elsbetiae_contig2142:6091..64391622815875.8369083-CDS-L-elsbetiae_contig2142:6091..6439Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2142 6092..6439 +
1691683161.6985438-CDS-L-elsbetiae_contig2142:6091..64391691683161.6985438-CDS-L-elsbetiae_contig2142:6091..6439Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2142 6092..6439 +
1622815875.8581028-CDS-L-elsbetiae_contig2142:7350..74671622815875.8581028-CDS-L-elsbetiae_contig2142:7350..7467Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2142 7351..7467 +
1691683161.7112396-CDS-L-elsbetiae_contig2142:7350..74671691683161.7112396-CDS-L-elsbetiae_contig2142:7350..7467Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2142 7351..7467 +
1622815875.869717-CDS-L-elsbetiae_contig2142:7904..82581622815875.869717-CDS-L-elsbetiae_contig2142:7904..8258Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2142 7905..8258 +
1691683161.7220142-CDS-L-elsbetiae_contig2142:7904..82581691683161.7220142-CDS-L-elsbetiae_contig2142:7904..8258Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2142 7905..8258 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2142.6548.1

>prot_L-elsbetiae_contig2142.6548.1 ID=prot_L-elsbetiae_contig2142.6548.1|Name=mRNA_L-elsbetiae_contig2142.6548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=273bp
MLNTLCQTWFAVCMTGGMVIDWAGCSIITALLPAGESQKRCCQFCHLIFR
WFLIGSCPWIRVSRPPAEDVTRLLDRGRVCLLMNHTSFGDSILFVGTTPS
SIIWRYRTLMKQTLFDWPFLGGICRMVGHFPVLFQSKDENSFTVDKPEQA
KIMEKVKAHVESNGCLCLFPEGKINRNPAVLCPFRRGTFGMVEEMDMAVV
TLTTVGCNDSWPRESPVGGRPATILMKLTEVAGAGHGLSATTIQEKAEAS
MQADVTSLLREREACGSKSKES*
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mRNA from alignment at L-elsbetiae_contig2142:5959..8455+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2142.6548.1 ID=mRNA_L-elsbetiae_contig2142.6548.1|Name=mRNA_L-elsbetiae_contig2142.6548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2497bp|location=Sequence derived from alignment at L-elsbetiae_contig2142:5959..8455+ (Laminarionema elsbetiae ELsaHSoW15)
CTAGTCAACAGCGCTACAGCACGAACCCTTCGTATCGGCTAATTGATACT GCTGTTTGAAGCTCCTTCGACCTGTGTGCGGCGAAATCAGCAAGTATAAA GAGGTCCTCTCTTCCCGTCTTGCGATCCAAGAGATGTTGAACACGTTATG CCAGACGTGGTTCGCCGTGTGCATGACTGGCGGGATGGTCATTGATTGGG CTGGGTGCTCAATCATAACCGCCCTCTTACCGGCTGGCGAGAGCCAAAAG CGCTGCTGCCAGTTCTGCCACTTAATCTTCCGTTGGTTTCTGATAGGCTC GTGCCCATGGATACGAGTGTCTCGGCCACCTGCCGAGGATGTGACTAGGC TGCTGGATCGTGGCAGGGTGTGCCTTTTGATGAACCACACGAGCTTCGGT GACAGCATTTTGTTCGTCGGGACGACTCCATCCAGCATCATCTGGCGGTA CCGGACACTGATGAAGCAAACCTTGTTTGATGTGAGTGACACACAGCGAT AGCTGTGCTAATACTCGGCGGGGGGGGGGGGCAGGAGCGGTACGATATTT GCCTGGAAACTGTGGGGCGCTTCGCAAATTGCACTGCTCCACCAGTCATC AATCATCATTAGGTTGAGGTATATAGCAGTTGTGGAGCAGACTCTGTGCT TTTGAGAGAATGCTTGTAGATGCACTGCTAGTATCTAAGGTTGACGTATA GATATAGCAGTTGTGGAGCAGACTCTGTGCTTTTGGGAGAATGCTTTTGC TCGTAGATGCACTGCTAGTATCTAATGACTATTTACCTGCTCGTGAGGCG ATCTGGTTCGCACCCTCTGAGGGGACCCCAGTTGACCGTTTCATTTTTGC TGTTGATGAGACAGCGCAACAACAGCAGTGCGAGCCGTATGATTCGGGCG ACTCAGCCTCTGTGTGTGTGTGTGTGTGTGTGTGTCCTTCCCATTTATTT TGGCGACAGTCCCCCCAAGTGGAGACGTGTACTACACCCTGCGGTGTACT TAAGAGGTACTACACTTTGCAGTGCATTTGTCTGTACAACTAGAACCAAC CCGGGTCATACAGGAGGGGGTGAACACTGGCCTATACTTCGCCAGAAAGA TAAACCGCAGGTTGTTGGTTCTCACGCCGTCACTGCTGCGCCTCAACGCC GCCCGCTTGGCTCCATGCGAGCTCGTCATGCTCGCCGGATGGTATATTAC AAGGATACTGCATGTTACAAGTACGACAGACCACCACGGCCGCACGACGA CCCCCGGGTCCGCCGACAAGGGTTATCCACTGTCCACGCATCTTTCAATG CCAGCGAATGCCACCCTACTCTCTGTGACCCACCCTCTCTCTCTGTTGTA CATGCATTCGATTCTCCCTCGTGTTGCCTGTATACGCAATAGTGGCCGTT TCTAGGCGGCATCTGTCGAATGGTGGGCCACTTCCCTGTCCTCTTCCAGA GCAAGGACGAAAACTCCTTTACTGTGGACAAGCCGGAGCAGGCAAAGATC ATGGAAAAGGTGACGTATTTTTCAGCTATGTTGTGTCGTAGCTGCAACGC CGTGTAGCTGCAATTAATTCTGTGCACTGGGGTTGGACTTGCGGAATATA ATATTTTTAGTTTTATTTTGTAGTTAGTTATTTTTTGGTTCGGGGCAGGA GGGAATGTCGGGATGCCCATGGAGGTGTAACTCAGCAATAGTAGCGCCAC CGCTGACAGCGCGTGCGAACTAAGATCGCTCACGACGACGATGTAAAAAT GGGTGTTGCTCTGCCCTTTTTTTGGAAGTATGGTACAAGCCGCACTCCTA TCTCCACGGCTGTTGTGGCTGTTTGTGTCTTACCAGCGCTTTCCTTCCGC TCTCTTTCTCTCTCTCTCTTTCTCTCTCTCTCTTCATCTCTCTCTCTGTG TCTCTCTCTGTCTGTCTCTTGCCTCTCTGCGCGTCTCTCTATCAAGGTGA AAGCACACGTCGAATCAAACGGGTGCCTGTGCCTGTTCCCCGAGGGCAAG ATCAACCGCAACCCGGCAGTCCTTTGCCCCTTTCGAAGGGGGACTTTCGG GATGGTGGAAGAAATGGACATGGCCGTGGTCACCCTCACGACCGTCGGGT GCAACGACTCCTGGCCCAGAGAGTCCCCGGTCGGGGGGCGGCCCGCCACG ATACTGATGAAGCTCACCGAGGTGGCGGGGGCGGGCCACGGGCTGTCGGC AACAACCATCCAGGAGAAGGCCGAGGCGTCGATGCAGGCGGACGTGACGT CCTTGCTTCGGGAGAGAGAAGCCTGCGGTTCAAAGTCGAAGGAGTCTTGA CGTCTCGGGGAAAGAGTACTAACAGGGACTCACTCCGCTTGGCAGTTTTT GGGGATATTTTCACGTTATAATCCTCTCTTTTGTAGCGTGAAGACAACAT ACATTTGTAGCTAGAAGTCACGTCTTGGGATAATTAAAGCAGCACCACTT GCGATTTGTGCAGACCTTGATCTTTATTGAAAAAGCTGGCGATGTCA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig2142:5959..8455+

>mRNA_L-elsbetiae_contig2142.6548.1 ID=mRNA_L-elsbetiae_contig2142.6548.1|Name=mRNA_L-elsbetiae_contig2142.6548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1638bp|location=Sequence derived from alignment at L-elsbetiae_contig2142:5959..8455+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTGAACACGTTATGCCAGACGTGGTTCGCCGTGTGCATGACTGGCGG
GATGGTCATTGATTGGGCTGGGTGCTCAATCATAACCGCCCTCTTACCGG
CTGGCGAGAGCCAAAAGCGCTGCTGCCAGTTCTGCCACTTAATCTTCCGT
TGGTTTCTGATAGGCTCGTGCCCATGGATACGAGTGTCTCGGCCACCTGC
CGAGGATGTGACTAGGCTGCTGGATCGTGGCAGGGTGTGCCTTTTGATGA
ACCACACGAGCTTCGGTGACAGCATTTTGTTCGTCGGGACGACTCCATCC
AGCATCATCTGGCGGTACCGGACACTGATGAAGCAAACCTTGTTTGATAT
GTTGAACACGTTATGCCAGACGTGGTTCGCCGTGTGCATGACTGGCGGGA
TGGTCATTGATTGGGCTGGGTGCTCAATCATAACCGCCCTCTTACCGGCT
GGCGAGAGCCAAAAGCGCTGCTGCCAGTTCTGCCACTTAATCTTCCGTTG
GTTTCTGATAGGCTCGTGCCCATGGATACGAGTGTCTCGGCCACCTGCCG
AGGATGTGACTAGGCTGCTGGATCGTGGCAGGGTGTGCCTTTTGATGAAC
CACACGAGCTTCGGTGACAGCATTTTGTTCGTCGGGACGACTCCATCCAG
CATCATCTGGCGGTACCGGACACTGATGAAGCAAACCTTGTTTGATTGGC
CGTTTCTAGGCGGCATCTGTCGAATGGTGGGCCACTTCCCTGTCCTCTTC
CAGAGCAAGGACGAAAACTCCTTTACTGTGGACAAGCCGGAGCAGGCAAA
GATCATGGAAAAGTGGCCGTTTCTAGGCGGCATCTGTCGAATGGTGGGCC
ACTTCCCTGTCCTCTTCCAGAGCAAGGACGAAAACTCCTTTACTGTGGAC
AAGCCGGAGCAGGCAAAGATCATGGAAAAGGTGAAAGCACACGTCGAATC
AAACGGGTGCCTGTGCCTGTTCCCCGAGGGCAAGATCAACCGCAACCCGG
CAGTCCTTTGCCCCTTTCGAAGGGGGACTTTCGGGATGGTGGAAGAAATG
GACATGGCCGTGGTCACCCTCACGACCGTCGGGTGCAACGACTCCTGGCC
CAGAGAGTCCCCGGTCGGGGGGCGGCCCGCCACGATACTGATGAAGCTCA
CCGAGGTGGCGGGGGCGGGCCACGGGCTGTCGGCAACAACCATCCAGGAG
AAGGCCGAGGCGTCGATGCAGGCGGACGTGACGTCCTTGCTTCGGGAGAG
AGAAGCCTGCGGTTCAAAGTCGAAGGAGTCTTGAGTGAAAGCACACGTCG
AATCAAACGGGTGCCTGTGCCTGTTCCCCGAGGGCAAGATCAACCGCAAC
CCGGCAGTCCTTTGCCCCTTTCGAAGGGGGACTTTCGGGATGGTGGAAGA
AATGGACATGGCCGTGGTCACCCTCACGACCGTCGGGTGCAACGACTCCT
GGCCCAGAGAGTCCCCGGTCGGGGGGCGGCCCGCCACGATACTGATGAAG
CTCACCGAGGTGGCGGGGGCGGGCCACGGGCTGTCGGCAACAACCATCCA
GGAGAAGGCCGAGGCGTCGATGCAGGCGGACGTGACGTCCTTGCTTCGGG
AGAGAGAAGCCTGCGGTTCAAAGTCGAAGGAGTCTTGA
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