mRNA_L-elsbetiae_contig21385.6536.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Match: D7FR67_ECTSI (Ubiquitin family protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR67_ECTSI) HSP 1 Score: 155 bits (393), Expect = 4.850e-42 Identity = 101/191 (52.88%), Postives = 106/191 (55.50%), Query Frame = 1 Query: 1 ANPALRGQLPQFMRRMADPQNVQALAQMQQSMQQLQEGGVFPPGMVPGMPGAAAXXXXXXXXXDLGPGLAGLNAFANLNLGGGXXXXXXXXXXXXX----------------------------------------------ASNPWATYAAQLTQLNDMGFTDTAACVRALVASQGNVNAAVERMLGGGV 435 ANPALRGQLPQFMRRMADPQNVQALAQMQQ M+QLQ GV PPGM+PG PGA D GPGLAGL+ F NLGGG +NP TYAAQLTQ+NDMGFTD AACVRALVASQGNVN AVERMLGGGV Sbjct: 380 ANPALRGQLPQFMRRMADPQNVQALAQMQQWMEQLQRAGVLPPGMMPGPPGAGGGGA------DFGPGLAGLSNFGTFNLGGGTPPAAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV 564
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Match: A0A835Z7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M7_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.950e-17 Identity = 73/160 (45.62%), Postives = 88/160 (55.00%), Query Frame = 1 Query: 1 ANPALRGQLPQFMRRMADPQNVQALAQMQQSMQQLQEGGVFPPGMVPGM------PGAAAXXXXXXXXXDLGPGLAGLNAFANLNLGGGXXXXXXXXXXXXXA-----------SNPWATYAAQLTQLNDMGFTDTAACVRALVASQGNVNAAVERMLGG 429 A P +R QLPQ + M+DP N+QA+ QMQQSM QLQ G+ PP +PGM P AA XXXXX AG F+ L G G A +NP YAAQL QL MGF+D AA +RALV ++GNVNAAVER++GG Sbjct: 368 AQPGMRQQLPQLLSGMSDPANLQAMIQMQQSMAQLQRAGIMPP--IPGMXXXXXAPAAATPXXXXXA--------AGGLDFSALLAGHGVGMPPGSGAAVPPAWLAAAQPPPPPANPAEAYAAQLAQLRAMGFSDDAASLRALVDARGNVNAAVERLIGG 517
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Match: A0A8J9WM63_9CHLO (Ubiquilin-1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WM63_9CHLO) HSP 1 Score: 83.2 bits (204), Expect = 8.250e-16 Identity = 70/150 (46.67%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 1 ANPALRGQL--PQFMRRMADPQNVQALAQMQQSMQQLQEGGVFPPGMVPGMP-GAAAXXXXXXXXXDLGPGLAG-----LNAFANLNLGGGXXXXXXXXXXXXXASNPWATYAAQLTQLNDMGFTDTAACVRALVASQGNVNAAVERMLG 426 A+P LR + P+ +RR DP N+QA+ QMQQ+MQQLQ G+ PP G P G AXXXXXXX G A + F LN+GGG +NP YA QL QL MGF D A ++AL A+ GNVNAAVER+LG Sbjct: 381 ADPRLRAAMSDPETLRRSLDPANIQAMMQMQQAMQQLQASGLMPPSA--GSPLGLGAXXXXXXXQPPTSAGAAAGAPDFSSMFNALNMGGGGMGLGGFGVPAAAVANPETLYATQLEQLRAMGFYDEQANIQALQATGGNVNAAVERLLG 528
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Match: I0Z0B5_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z0B5_COCSC) HSP 1 Score: 81.6 bits (200), Expect = 2.810e-15 Identity = 71/152 (46.71%), Postives = 88/152 (57.89%), Query Frame = 1 Query: 1 ANPALRGQL--PQFMRRMADPQNVQALAQMQQSMQQLQEGGVFPPGMVPGMPGAAAXXXXXXXXXDLGPGLAGL--------NAFANLNLGGGXXXXXXXXXXXXXASNPWATYAAQLTQLNDMGFTDTAACVRALVASQGNVNAAVERMLG 426 ++P LR + P +RR DP N+QA+ QMQQ+MQQLQ G+ PPG + A XXXXXXXX + P AG + F +LN+GGG X SNP YA QL QL MGF D A ++AL A+ GNVNAAVER+LG Sbjct: 359 SDPRLRAAMSDPDMLRRSLDPANIQAMMQMQQAMQQLQGSGLMPPGPGGALGLGAXXXXXXXXXLEQPPVSAGAPPAVPNFASMFNSLNMGGGGXGLGGFGVPAA-VSNPETAYATQLEQLRAMGFFDEQANIQALQATGGNVNAAVERLLG 509
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Match: A0A5D6XM90_9STRA (UBA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM90_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.020e-12 Identity = 57/146 (39.04%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 4 NPALRG--QLPQFMRRMADPQNVQALAQMQQSMQQLQEGGVFPPGMVPGMPGAAAXXXXXXXXXDLGPGLAGLNAFANLNLGGGXXXXXXXXXXXXXASNPWATYAAQLTQLNDMGFTDTAACVRALVASQGNVNAAVERMLGGGV 435 NP LR Q P+F+R +PQN+QA+ QMQ +M QLQ G+ P + GAA A + GG NP YA+QLTQL DMGF++ +RAL A+QGNV+AAVER+L G V Sbjct: 370 NPQLRQMMQSPEFLRAAMNPQNLQAMMQMQSAMNQLQSSGLIPGMAGMNLGGAAGSAPTSGTAAPAANPFAAFGGMDFASFGGAAAAPAP-------VGNPEELYASQLTQLTDMGFSNREQNLRALQATQGNVHAAVERLLSGTV 508
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Match: A0A2D4BV74_PYTIN (Ubiquitin family protein putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV74_PYTIN) HSP 1 Score: 72.8 bits (177), Expect = 3.460e-12 Identity = 70/152 (46.05%), Postives = 90/152 (59.21%), Query Frame = 1 Query: 1 ANPALRGQL--PQFMRRMADPQNVQALAQMQQSMQQLQEGGVFPPGMV-----PGMPGAAAXXXXXXXXXDLGPGLAGLNAFANLNLGGGXXXXXXXXXXXXXASNPWATYAAQLTQLNDMGFTDTAACVRALVASQGNVNAAVERMLGGGV 435 ANP +R + P F+R + +PQN+QA+ QMQ +M QL+ G+ P GMPGA GP L F+ L LGG XXXXXXXX A+NP YA+QLTQLNDMGF++ +RAL A+ GNV+AAVER+L G + Sbjct: 341 ANPQMRQMMMNPDFIRGIMNPQNLQAMLQMQSAMNQLRSSGLIPGFXAMNLGGAGMPGAPGTTPAAGS----GPPLD----FSTL-LGG--XXXXXXXXAAAPAANPEEQYASQLTQLNDMGFSNRDQNIRALQATFGNVHAAVERILNGSI 481
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Match: A0A5B8MJE3_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJE3_9CHLO) HSP 1 Score: 70.1 bits (170), Expect = 3.050e-11 Identity = 54/136 (39.71%), Postives = 68/136 (50.00%), Query Frame = 1 Query: 28 PQFMRRMADPQNVQALAQMQQSMQQLQEGGVFP--PGMVPGMPGAAAXXXXXXXXXDLGPGLAGLNAFANLNLGGGXXXXXXXXXXXXXASNPWATYAAQLTQLNDMGFTDTAACVRALVASQGNVNAAVERMLGG 429 P F+R+MADP N++A+ QMQQ+MQQLQ G+ P P + G G G G A N N+ P YA+QLTQL +MGF D A +RAL GNVNAAV+R+L G Sbjct: 389 PNFLRQMADPANIRAMMQMQQAMQQLQSSGLMPAFPSSMEGFGGFP------------GAGAAAANTNPTPNV------------------PPEELYASQLTQLQEMGFHDQQANIRALSQVGGNVNAAVDRLLSG 494
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Match: A0A482SMA7_9ARCH (UBA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMA7_9ARCH) HSP 1 Score: 64.7 bits (156), Expect = 4.200e-10 Identity = 57/122 (46.72%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 64 VQALAQMQQSMQQLQEGGVFPPGMVPGMPGAAAXXXXXXXXXDLGPGLAGLNAFANLNLGGGXXXXXXXXXXXXXASNPWATYAAQLTQLNDMGFTDTAACVRALVASQGNVNAAVERMLGG 429 +QA+ QMQQSMQ LQ G+ PPG + P A XXXXX G G F++L LG G +P +A+QL QL DMGF D AA +RAL A+ GNVNAAVER+L G Sbjct: 67 LQAMQQMQQSMQTLQGAGILPPGGMGTNPYANXXXXXXGLPASGGGNPVGGLNFSSL-LGSGAAAPAAPPV------DPAVRFASQLQQLQDMGFGDQAANLRALQATSGNVNAAVERLLNG 181
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Match: A0A7S3U9N8_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3U9N8_9CHLO) HSP 1 Score: 64.3 bits (155), Expect = 3.130e-9 Identity = 55/139 (39.57%), Postives = 68/139 (48.92%), Query Frame = 1 Query: 28 PQFMRRMADPQNVQALAQMQQSMQQLQEGGV--FPPGMVPGMPGAAAXXXXXXXXXDLGP--GLAGLNAFANLNLGGGXXXXXXXXXXXXXASNPWATYAAQLTQLNDMGFTDTAACVRALVASQGNVNAAVERMLGGG 432 P+F+R M DP N+QA+ QM+Q+M QL+ G F G M A A DL GL G A A NP + YA QL QL DMGF D +RALVA++GNVN A+ER+L G Sbjct: 365 PEFLRVMMDPNNMQAMMQMEQAMGQLRGSGFESFLNGSQ--MANANAPSDGAANPPDLSALMGLLGSGAAA-----------------PPPPENPESAYATQLQQLKDMGFYDVQENIRALVAARGNVNEAIERLLSSG 484
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Match: A0A0W8DBV9_PHYNI (DNA polymerase kappa n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DBV9_PHYNI) HSP 1 Score: 63.5 bits (153), Expect = 3.450e-9 Identity = 56/130 (43.08%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 52 DPQNVQALAQMQQSMQQLQEGGVFP--PGMVPGMPGAAAXXXXXXXXXDLGPGLAGLNAFANLNLGGGXXXXXXXXXXXXXASNPWATYAAQLTQLNDMGFTDTAACVRALVASQGNVNAAVERMLGGGV 435 +PQN+QA+ QMQ +M QL+ G+ P GM G G AXXX P A N FA G A NP YA+QLTQLNDMGF+D +RAL A+ GNV AAV+R+L G + Sbjct: 149 EPQNMQAMMQMQNAMNQLRGSGLIPGLEGMNLGA-GTGAXXXTTGATGVTNPAAA--NPFAMFG-GLPGSGFGAASTPAAPAGNPEEIYASQLTQLNDMGFSDRDRNIRALQATFGNVQAAVDRLLSGSI 274 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21385.6536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21385.6536.1 >prot_L-elsbetiae_contig21385.6536.1 ID=prot_L-elsbetiae_contig21385.6536.1|Name=mRNA_L-elsbetiae_contig21385.6536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp ANPALRGQLPQFMRRMADPQNVQALAQMQQSMQQLQEGGVFPPGMVPGMPback to top mRNA from alignment at L-elsbetiae_contig21385:998..2092+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21385.6536.1 ID=mRNA_L-elsbetiae_contig21385.6536.1|Name=mRNA_L-elsbetiae_contig21385.6536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1095bp|location=Sequence derived from alignment at L-elsbetiae_contig21385:998..2092+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21385:998..2092+ >mRNA_L-elsbetiae_contig21385.6536.1 ID=mRNA_L-elsbetiae_contig21385.6536.1|Name=mRNA_L-elsbetiae_contig21385.6536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig21385:998..2092+ (Laminarionema elsbetiae ELsaHSoW15)back to top |