mRNA_L-elsbetiae_contig21334.6523.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21334.6523.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE) HSP 1 Score: 285 bits (730), Expect = 1.710e-90 Identity = 128/170 (75.29%), Postives = 146/170 (85.88%), Query Frame = 1 Query: 1 ATTVAVPIADERTCPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNHFISFSKNLALGYCCKSKVVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDMPGFDSSTCATDITWAGQRAFHMNQLETPGHEYHIPGLLQCVNQAPRLLGCEAAYYFPKDMDVCSAGAA 510 A + A ++ E CPY ID+ EEA RIKD SLPGNVVKVEHLTFCRTGNHF SF +NLALGYCCKSKVVWLPPKDDVLAPG+FN+GTPGPRWFDFSSAPD+ GFDSS C+ DITWAGQRAFHM+QL++P HE+H PGL +C+ +APRLL CEAAYYFPKD+D+C A AA Sbjct: 81 AASAAPGVSLEGGCPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCHATAA 250
BLAST of mRNA_L-elsbetiae_contig21334.6523.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE) HSP 1 Score: 212 bits (540), Expect = 4.970e-62 Identity = 129/232 (55.60%), Postives = 154/232 (66.38%), Query Frame = 1 Query: 37 TCPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNHFISFSKNLALGYCCKSKVVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDMPGFDSSTCATDITWAGQRAFHMNQLETPGHEYHIPGLLQCVNQAPRLLGCEAAYYFPKDM--DVC----SAGAAPLTSLPKDQEEGEAQLGSGGRRDELERRKIAEATVEGQXXXXXXXXXXXXXXXX-GTLVLHVRSGDIF 711 +CPYAI SEEEA R +TS PGNVV V +CR GN F S S++L+LGYCCKS+++ LPPKD+ LAPG FNEG PGPR FDFSSAPD+ GFD S+C +ITW G AFH+ L GH Y+ P L +C+ + PR+ GCEAAY+FPKDM D+C +A S +D E G R D ER + EAT XXXXXXXXXXXXX G LV+HVRSGDIF Sbjct: 146 SCPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGVRLDWGERGQGREATXXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIF 377
BLAST of mRNA_L-elsbetiae_contig21334.6523.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI) HSP 1 Score: 206 bits (523), Expect = 9.300e-60 Identity = 105/234 (44.87%), Postives = 136/234 (58.12%), Query Frame = 1 Query: 40 CPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNHFISFSKNLALGYCCKSKVVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDMPGFDSSTCATDITWAGQRAFHMNQLETPGHEYHIPGLLQCVNQAPRLLGCEAAYYFPKDMDVCSAGAAPLTSLPKDQEEGEAQLGSGGRRDELERRKIAEATVEGQXXXXXXXXXXXXXXXXGTLVLHVRSGDIFDTKVLAYYGQ 741 CPY + + E R++D ++PGNV+ + F R GN F + NL LGYCCKSK+V LP KDD LAPGIF EGTPGPRW+DF++APD+ GFD+S+C DITW G+ AFH+ L+ P H Y+ P L CV PRL GCEAAY+FP +DVC + + +Q A SG +++ + EG+ TLV+HVRSGDIF YGQ Sbjct: 124 CPYILRTPGERL-RMRDPAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPMGVDVCLSDRTATGDVVHEQRGNGASGRSGPG---VKKNLVGSEEEEGRPA--------------NTLVIHVRSGDIFVDPAAPGYGQ 339
BLAST of mRNA_L-elsbetiae_contig21334.6523.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI) HSP 1 Score: 202 bits (515), Expect = 1.070e-59 Identity = 93/166 (56.02%), Postives = 116/166 (69.88%), Query Frame = 1 Query: 28 DERTCPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNHFISFSKNLALGYCCKSKVVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDMPGFDSSTCATDITWAGQRAFHMNQLETPGHEYHIPGLLQCVNQAPRLLGCEAAYYFPKDMDVCSAGAAPLTSL 525 ++ C YAI + + A + D+++ GNVVKV HL F RTGN F++ +NLALGYCCK+K VWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPD+ G D C DI W + A M L+ P ++P + C+ +APRLLGCEAAYYFP+D+ VC P +L Sbjct: 55 NKHDCTYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLAL 220
BLAST of mRNA_L-elsbetiae_contig21334.6523.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI) HSP 1 Score: 206 bits (523), Expect = 1.440e-59 Identity = 127/260 (48.85%), Postives = 157/260 (60.38%), Query Frame = 1 Query: 16 VPIAD-ERTCPYAIDSEEEAFFRIK------DTSLPGNVVKVEHLTFCRTGNHFISFSKNLALGYCCKSKVVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDMPGFDSSTCATDITWAGQRAFHMNQLETPGHEYHIPGLLQCVNQAPRLLGCEAAYYFPKDMDVCSAGAAPLTSLPKDQEEGEAQLGSGGRRDELERRKIAEATV-----------EGQXXXXXXXXXXXXXXXXGTLVLHVRSGDIFDTKVLAYYGQ 741 +PIA +CPYAI +EEE R +TS PGNVV V +CR GN F+S ++L+LGYCCKS++V LPPKDD LAPG FN+GTPGPR FDFSSAPD+ GFDSS+C +I W G +AFH+ L GH Y+ PGL C+ + P ++GCEAAY+FP DM A P+ L + E G + RD E+ K + E XXXXXXXXXXX G LV+HVRSGDIF + YGQ Sbjct: 137 LPIAPFSSSCPYAILAEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDM------AVPMCPLDETAEGGNKNV-----RDISEKPKDDAPGIQLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQ 385
BLAST of mRNA_L-elsbetiae_contig21334.6523.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 1.360e-10 Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 1 Query: 40 CPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNHFISFSKNLALGYCCKSKVVWLPPKDDVLAPGIFNEG--TPGPRWFDFSSA-PDMPGFDS-----STCATDITWAGQRAFHMNQLETPGHEYHIPGLLQCVNQAPRLLGCEAAY 468 CP A+ S +A + + N + + R+GNHF+ S LA+G+CC+S+++ LP D + PG G G RWFDFS P PGF+ C + AF G+E+ LL+C+N+ L GCE AY Sbjct: 89 CPQAL-SRSQAEAALDGGNSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAM-PGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVCRPQMEDGADNAF--------GYEHIHSRLLRCMNRV-YLRGCEKAY 228
BLAST of mRNA_L-elsbetiae_contig21334.6523.1 vs. uniprot
Match: A0A6H5L7B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 5.290e-8 Identity = 74/252 (29.37%), Postives = 106/252 (42.06%), Query Frame = 1 Query: 22 IADERTCPYAIDSEEEAFFRIKDTSLPGNVVKVEHLT-FCRTGNHFISFSKNLALGYCCKSKVVWLPPKDDVLAPGIFNEGTPGPRWFDFSS-----APDMPGFDSSTCATDITWAGQR--AFHMNQLETPGHEYHIPGL---LQCVNQAPRLLGCEAAYYFPKDMDVCSAGAAPLTSLPKDQEEGEAQLGSGGRRDELERRKIAEATVEGQXXXXXXXXXXXXXXXXGTLVLHVRSGDIFDTKVLAY-YGQ 741 + +R CP AI S +EA R PG V+ + + R+GNH+++ S ++ +CC+ KV+ LP D L F FS AP P + + + TD R +L H HI GL LQ + ++ GCEAAY + + A +P L + ++E AQL G LERR G+LV+HVRSGDIF + + YGQ Sbjct: 42 VVQDRGCPQAI-SPDEADIRRSTRGWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTNRAP--PQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHIRGLHPHLQKCMRNVKMRGCEAAY-LKESLGGEHACPSPQRQLAEREDES-AQL-VAGTTSPLERRGA------------------------GSLVVHVRSGDIFKPGTIYHQYGQ 263
BLAST of mRNA_L-elsbetiae_contig21334.6523.1 vs. uniprot
Match: A0A6H5L0Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z0_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 6.160e-6 Identity = 71/249 (28.51%), Postives = 108/249 (43.37%), Query Frame = 1 Query: 40 CPYAIDSEEEAFFRIKDTSLPGNVVKVEHL-TFCRTGNHFISFSKNLALGYCCKSKVVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAP-----DMPGF-----DSSTCATDITWAGQRAFHMNQLETPGHEYHIPGLLQCVNQAPRLLGCEAAYYFPKDMDVCSAGAAPLTSLPKDQEEGEAQLGSGGRRDELERRKIAEAT--VEGQXXXXXXXXXXXXXXXXGTLVLHVRSGDIFDTKV--LAYYGQ 741 CP AI EE A D SLPG ++ V L R+GNH+ ++ ++ +CC+ KVV +P +D VL + + FSSA + G+ D C +GQ+ + HE LLQC+ + ++GC A + DV A A + ++EG+ ERR + AT VEG+ +LV+H+RSGDIF ++ + +YGQ Sbjct: 43 CPQAISKEEAAALEA-DESLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVRMPEQDTVLPTENGDTLELRHNTYSFSSADAALRTEHLGYGDIATDPEICPPIKHLSGQKTKEFTREGV--HER----LLQCMLRV-EMIGCVAHFLH----DVVGADDA----FCRWKDEGKE-----------ERRSLLRATSAVEGEDKRHAGSSPQGKGQ---SLVVHMRSGDIFSPELSDIPWYGQ 261 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21334.6523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21334.6523.1 >prot_L-elsbetiae_contig21334.6523.1 ID=prot_L-elsbetiae_contig21334.6523.1|Name=mRNA_L-elsbetiae_contig21334.6523.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp ATTVAVPIADERTCPYAIDSEEEAFFRIKDTSLPGNVVKVEHLTFCRTGNback to top mRNA from alignment at L-elsbetiae_contig21334:48..1712+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21334.6523.1 ID=mRNA_L-elsbetiae_contig21334.6523.1|Name=mRNA_L-elsbetiae_contig21334.6523.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1665bp|location=Sequence derived from alignment at L-elsbetiae_contig21334:48..1712+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21334:48..1712+ >mRNA_L-elsbetiae_contig21334.6523.1 ID=mRNA_L-elsbetiae_contig21334.6523.1|Name=mRNA_L-elsbetiae_contig21334.6523.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig21334:48..1712+ (Laminarionema elsbetiae ELsaHSoW15)back to top |