mRNA_L-elsbetiae_contig2130.6515.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Match: D8LDG1_ECTSI (Dihydrodipicolinate reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG1_ECTSI) HSP 1 Score: 161 bits (408), Expect = 3.870e-47 Identity = 77/84 (91.67%), Postives = 80/84 (95.24%), Query Frame = 1 Query: 1 KVRDVEGQLAFGVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAEGTADAVEFLAGKAAAVAEKRVYNMLDVLREGGM 252 KVRD EGQLAFGVPEE+LAGHAFHTYSLKSNDGTVEFQFRHNVCGR MYAEGTADAVEFLAGKA + A+KRVYNMLDVLREGGM Sbjct: 250 KVRDTEGQLAFGVPEEHLAGHAFHTYSLKSNDGTVEFQFRHNVCGRLMYAEGTADAVEFLAGKAGSGADKRVYNMLDVLREGGM 333
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Match: A0A835ZG43_9STRA (Dihydrodipicolinate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG43_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.370e-39 Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 1 Query: 4 VRDVEGQLAFGVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAEGTADAVEFLAGKAAAVAEKRVYNMLDVLREGGM 252 +RD GQ AFGVPEEYL GHAFH YSL+S DGTVEFQFRHNVCGRRMYAEGTADAVEFLA + A+ A+KRVYNM+DVL+ GG+ Sbjct: 199 IRDAPGQKAFGVPEEYLGGHAFHMYSLRSGDGTVEFQFRHNVCGRRMYAEGTADAVEFLARQMASNAQKRVYNMIDVLKMGGI 281
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Match: A0A1Q9CJT0_SYMMI (4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CJT0_SYMMI) HSP 1 Score: 120 bits (302), Expect = 1.620e-33 Identity = 54/84 (64.29%), Postives = 68/84 (80.95%), Query Frame = 1 Query: 1 KVRDVEGQLAFGVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAEGTADAVEFLAGKAAAVAEKRVYNMLDVLREGGM 252 ++RD Q AFGVPEE+ GHAFHTY+L S+DG+V+FQF+HNVCGRR Y EG ADAV+F+A +AAA A K+VYNM+D+L G M Sbjct: 46 QLRDDASQRAFGVPEEFSNGHAFHTYTLTSSDGSVQFQFKHNVCGRRTYGEGVADAVQFIASQAAAKAPKKVYNMIDILEAGQM 129
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Match: A0A7S3XN34_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN34_HETAK) HSP 1 Score: 122 bits (307), Expect = 1.710e-32 Identity = 56/83 (67.47%), Postives = 69/83 (83.13%), Query Frame = 1 Query: 4 VRDVEGQLAFGVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAEGTADAVEFLAGKAAAVAEKRVYNMLDVLREGGM 252 +RD EGQ AFGVPEEYL GHA+HTY+L S DGT EFQFRHNV GRR+YAEGTADAV+FLA + A +K+V++M+DVL+ G + Sbjct: 202 IRDAEGQRAFGVPEEYLKGHAYHTYALVSPDGTTEFQFRHNVNGRRVYAEGTADAVQFLAEQIKAKNDKKVFSMIDVLKAGAL 284
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Match: A0A7S2AGR2_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2AGR2_9DINO) HSP 1 Score: 117 bits (294), Expect = 2.090e-31 Identity = 53/84 (63.10%), Postives = 68/84 (80.95%), Query Frame = 1 Query: 1 KVRDVEGQLAFGVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAEGTADAVEFLAGKAAAVAEKRVYNMLDVLREGGM 252 KVRD EG GVPEE++ GHA+HTY+L S DG+V+FQF+HNVCGRR YAEG ADAV+FLA K + ++KR+++M+DVL EG M Sbjct: 120 KVRDAEGYKKMGVPEEHVGGHAWHTYTLTSPDGSVQFQFKHNVCGRRTYAEGVADAVQFLAEKIKSGSKKRIFSMIDVLGEGKM 203
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Match: S8E035_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E035_9LAMI) HSP 1 Score: 118 bits (295), Expect = 7.760e-31 Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 1 Query: 1 KVRDVEGQLAF-GVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAEGTADAVEFLAGKAAAVAEKRVYNMLDVLREGGM 252 K+RD E Q+ G+PEE+L+GHAFHTY L S DGTV F+F+HNVCGR +YAEGT DA+ FL K AEKR+Y+M+DVLREG M Sbjct: 188 KIRDRESQVEILGIPEEHLSGHAFHTYRLTSPDGTVSFEFQHNVCGRSIYAEGTVDAILFLTNKVKTKAEKRIYDMIDVLREGNM 272
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Match: A0A812JJH1_9DINO (DAPB2 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812JJH1_9DINO) HSP 1 Score: 117 bits (294), Expect = 1.020e-30 Identity = 53/84 (63.10%), Postives = 65/84 (77.38%), Query Frame = 1 Query: 1 KVRDVEGQLAFGVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAEGTADAVEFLAGKAAAVAEKRVYNMLDVLREGGM 252 K+RD Q AFGVPEE+ GHAFHTY+L S DG+V+FQF+HNVCGRR Y EG ADAV+F+A KA + K+VYNM+D+L G M Sbjct: 186 KLRDDASQKAFGVPEEFSNGHAFHTYTLTSGDGSVQFQFKHNVCGRRTYGEGVADAVQFIAHKAMEKSPKKVYNMIDILEAGQM 269
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Match: A0A7S2PFN2_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PFN2_9DINO) HSP 1 Score: 117 bits (294), Expect = 1.070e-30 Identity = 53/84 (63.10%), Postives = 68/84 (80.95%), Query Frame = 1 Query: 1 KVRDVEGQLAFGVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAEGTADAVEFLAGKAAAVAEKRVYNMLDVLREGGM 252 K+R E Q+AFGVP++ L+GHA+HTY+L S DG+V+FQF+HNVCGRR YAEG DAVEFL K + ++KRV+NM+DVL EG M Sbjct: 188 KLRKEEDQVAFGVPKDALSGHAWHTYTLTSGDGSVQFQFKHNVCGRRTYAEGVVDAVEFLVDKIVSGSKKRVFNMIDVLSEGKM 271
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Match: A0A6A4KXW2_9ERIC (DapB_C domain-containing protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4KXW2_9ERIC) HSP 1 Score: 110 bits (275), Expect = 4.350e-30 Identity = 50/73 (68.49%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 34 GVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAEGTADAVEFLAGKAAAVAEKRVYNMLDVLREGGM 252 GVPEE+L+GHAFH Y+L S D TV F+F+HNVCGR +YAEGT DA FLA K + AEKR+YNM+DVLREG M Sbjct: 3 GVPEEHLSGHAFHVYNLTSPDKTVSFEFQHNVCGRSIYAEGTIDAAIFLAQKVRSKAEKRIYNMIDVLREGNM 75
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Match: A0A812LTM1_SYMPI (DAPB1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812LTM1_SYMPI) HSP 1 Score: 116 bits (291), Expect = 4.970e-30 Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 1 KVRDVEGQLAFGVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAEGTADAVEFLAGKAAAVAEKRVYNMLDVL 237 K+RD Q AFGVPEE+ GHAFHTY+L S+DG+V+FQF+HNVCGRR Y EG ADAV+F+A KA + K+VYNM+D+L Sbjct: 200 KLRDDASQRAFGVPEEFANGHAFHTYTLTSSDGSVQFQFKHNVCGRRTYGEGVADAVQFIASKAMEKSSKKVYNMIDIL 278 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2130.6515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2130.6515.1 >prot_L-elsbetiae_contig2130.6515.1 ID=prot_L-elsbetiae_contig2130.6515.1|Name=mRNA_L-elsbetiae_contig2130.6515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp KVRDVEGQLAFGVPEEYLAGHAFHTYSLKSNDGTVEFQFRHNVCGRRMYAback to top mRNA from alignment at L-elsbetiae_contig2130:20758..21417- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2130.6515.1 ID=mRNA_L-elsbetiae_contig2130.6515.1|Name=mRNA_L-elsbetiae_contig2130.6515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=660bp|location=Sequence derived from alignment at L-elsbetiae_contig2130:20758..21417- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2130:20758..21417- >mRNA_L-elsbetiae_contig2130.6515.1 ID=mRNA_L-elsbetiae_contig2130.6515.1|Name=mRNA_L-elsbetiae_contig2130.6515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=510bp|location=Sequence derived from alignment at L-elsbetiae_contig2130:20758..21417- (Laminarionema elsbetiae ELsaHSoW15)back to top |