mRNA_L-elsbetiae_contig2127.6492.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2127.6492.1
Unique NamemRNA_L-elsbetiae_contig2127.6492.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Match: D8LFN1_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFN1_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 4.150e-105
Identity = 171/224 (76.34%), Postives = 185/224 (82.59%), Query Frame = 1 
Query:    1 MGRDFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAAEKFNEISNAYSVLTDDEQRQRYDQFGEAGLGRGXXXXXXXXXFDQVDLSDIFDSFFG---------------GGGMGDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNTCGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLVEKTKQVKVR 627
            MGRD YEVLGV+R AD S+LKSAFRKLAREYHPDVND+P A+EKFNEIS AYSVL DDEQRQRYDQFGEAG+GRGXXXXXX   FDQVDLSDIFDSFFG               G   GDDLRVDLDLDFKSACFG+EEKVRIRHLE+CNTC+GSGVKPG+  +         VVIQATRTPLGAFQTQTTCPTCRG G+VV+EYCGSCSGQG+VEKTKQVKV+
Sbjct:  102 MGRDLYEVLGVDRGADKSQLKSAFRKLAREYHPDVNDSPGASEKFNEISTAYSVLNDDEQRQRYDQFGEAGIGRGXXXXXXG--FDQVDLSDIFDSFFGXXXXXXXXXXXXXRQGPVRGDDLRVDLDLDFKSACFGVEEKVRIRHLETCNTCSGSGVKPGAKVSXXXXXXXXXVVIQATRTPLGAFQTQTTCPTCRGTGEVVEEYCGSCSGQGVVEKTKQVKVK 323
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BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Match: B5Y3P1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3P1_PHATC)

HSP 1 Score: 253 bits (647), Expect = 1.340e-79
Identity = 129/228 (56.58%), Postives = 155/228 (67.98%), Query Frame = 1 
Query:    7 RDFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAAEKFNEISNAYSVLTDDEQRQRYDQFGEAGLGRGXXXXXXXXXF-------DQVDLSDIFDSFFGGGG---------------MGDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNTCGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLVEKTKQVKV 624
            RDFY +LGV R AD + +K+A+RKLA++YHPD N   +  EKF E++ AY VLTD   +Q+YD+FGE GLG           F        +VDL DIFDSFFGGG                +GDDLR DL +DFK+A FG EEKVRIRHLE+C+TCTGSGVKPGS  + C  C GSGV +Q TRTPLG FQTQ TC TCRG G+ VDEYCG+C GQG+ +KTKQ+KV
Sbjct:   71 RDFYAILGVGRLADKAAIKAAYRKLAKQYHPDANPGVDTTEKFQELNRAYEVLTDPVLKQKYDRFGERGLGTSAASDAEGSPFGGAGGRGQEVDLGDIFDSFFGGGSSGMGGRNGPRRSGPIVGDDLRFDLQVDFKTAVFGGEEKVRIRHLETCDTCTGSGVKPGSKVSMCTLCNGSGVTVQVTRTPLGNFQTQQTCATCRGTGERVDEYCGTCGGQGVNQKTKQIKV 298
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BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Match: A0A835YPT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT5_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.250e-78
Identity = 134/223 (60.09%), Postives = 153/223 (68.61%), Query Frame = 1 
Query:    1 MGRDFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAAEKFNEISNAYSVLTDDEQRQRYDQFGEAGLGRGXXXXXXXXXFDQVDLSDIFDSFFGGGGM--------------GDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNTCGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLVEKTKQVKVR 627
            M  DFY+ LGV R+AD  ++KSA+RKLARE+HPDVN  PN  EKF EI+ AY VL+D E RQRYDQFGEAGL  G            VDLSDIF                       GDDLRVDLDLDFK+ACFG EEKVRIRHLE+C+TCTGSG KPG+  +T       GVVIQ  RTPLGAFQTQT+CP CRG+GQ V+EYCG+C G+GLVE  KQVKV+
Sbjct:   67 MAADFYQTLGVGRTADVKDIKSAYRKLAREFHPDVN--PNGEEKFKEINRAYEVLSDPEMRQRYDQFGEAGLKGGMGGGPGGMG--DVDLSDIFXXXXXXXXXXXXXXXARSRAPVRGDDLRVDLDLDFKTACFGSEEKVRIRHLETCDTCTGSGAKPGAKVSTXXXXXXQGVVIQVQRTPLGAFQTQTSCPVCRGSGQRVEEYCGTCGGRGLVETAKQVKVK 285
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BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Match: F0YE72_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE72_AURAN)

HSP 1 Score: 244 bits (622), Expect = 7.860e-77
Identity = 131/231 (56.71%), Postives = 156/231 (67.53%), Query Frame = 1 
Query:    1 MGRDFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAAEKFNEISNAYSVLTDDEQRQRYDQFGEAGLGRGXXXXXXXXXFDQVDLSDIFDSFFGGG-----------------------GMGDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNTCGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLVEKTKQVKV 624
            MGRD YEVLGV R +D   +K  FR+ AR+YHPDVN  P+AA+ + EIS AYSVL+D +++ RYDQFGEAGLG  XXXXXX     +V+L DIFDSFFGG                          GDDLR DL+LDFK+ACFG +EKVRI HLESC  C G G++PG+   TC  C GSGVV+Q TRTPLG FQTQ+ CPTC+G GQ V+ YC  C+GQG+  K KQV V
Sbjct:    1 MGRDLYEVLGVPRGSDARTIKRGFREAARKYHPDVNSEPDAADVYKEISQAYSVLSDPDKKARYDQFGEAGLGGXXXXXXXGV---EVNLEDIFDSFFGGXXXXXXPXXXXXXGFGRAQRTRGPAQGDDLRADLELDFKTACFGGQEKVRITHLESCGKCKGDGIEPGAKVTTCDTCRGSGVVMQVTRTPLGNFQTQSACPTCQGTGQSVEAYCAKCNGQGVERKAKQVSV 228
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BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Match: A0A7S2A588_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2A588_9STRA)

HSP 1 Score: 243 bits (621), Expect = 3.840e-75
Identity = 127/233 (54.51%), Postives = 152/233 (65.24%), Query Frame = 1 
Query:    7 RDFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAAEKFNEISNAYSVLTDDEQRQRYDQFGEAGLGR--------GXXXXXXXXXFDQVDLSDIFDSFFGGGGM-------------------GDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNTCGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLVEKTKQVKV 624
            RDFY +LGV RSAD  E+KSA+R+LA++YHPD N   +  EKF EI+ AY VL D + +++YD +GEAG+G         G           +VDLSDIFDSFFGGG                     GDDLR DL++DFK+A FG EEKVRIRHLE+C TCTGSGVKPGS  +         V +Q TRTPLG FQTQ TCP CRG GQ V+EYCG+CSGQG V+KTKQ+KV
Sbjct:  118 RDFYAILGVSRSADAKEIKSAYRQLAKKYHPDANPGQDTTEKFQEINRAYEVLNDTDLKKKYDMYGEAGIGTSAASDGAAGSPFGGPGGFGQEVDLSDIFDSFFGGGXXXXXXXXXXXXXXXTRGPIAGDDLRFDLEIDFKTAVFGGEEKVRIRHLETCGTCTGSGVKPGSKVSXXXXXXXXXVTMQVTRTPLGNFQTQQTCPACRGTGQRVEEYCGTCSGQGRVQKTKQIKV 350
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BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Match: A0A1Z5KP79_FISSO (Molecular chaperone DnaJ n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP79_FISSO)

HSP 1 Score: 238 bits (607), Expect = 1.010e-73
Identity = 121/230 (52.61%), Postives = 151/230 (65.65%), Query Frame = 1 
Query:    7 RDFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAAEKFNEISNAYSVLTDDEQRQRYDQFGEAGLGRGXXXXXXXXX-------FDQVDLSDIFDSFFGGGG-----------------MGDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNTCGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLVEKTKQVKV 624
            RDFY +LGV R+AD +++K A+RKLA++YHPD N   +  EKF EI+ AY VLTD   +Q+YD FGE G+G                    +VDL DIFD+FFGGGG                 +GDDLR DL++DFK+A FG E+KV+IRHLE+C+TC G+GVKPG+  +         V +Q TRTPLG FQTQ TCPTCRG GQ V+EYCGSC GQGL +KTKQ+KV
Sbjct:   61 RDFYAILGVSRNADAAQIKQAYRKLAKQYHPDANPGQDTTEKFQEINRAYEVLTDPNLKQKYDMFGEQGIGTSAASDSTAGSPFGGGGFTQEVDLGDIFDTFFGGGGASGFGGGRRTARQRGPVIGDDLRFDLEIDFKTAVFGGEQKVKIRHLETCDTCGGNGVKPGAKISXXXXXXXXXVTMQVTRTPLGNFQTQQTCPTCRGTGQRVEEYCGSCGGQGLNQKTKQIKV 290
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BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Match: A0A7S1FNN1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNN1_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.320e-73
Identity = 127/220 (57.73%), Postives = 146/220 (66.36%), Query Frame = 1 
Query:    1 MGRDFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAAEKFNEISNAYSVLTDDEQRQRYDQFGEAGLGRGXXXXXXXXXF-DQVDLSDIFDSFFGGGGM-----------GDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNTCGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLVEKTKQVKV 624
            M  +FY  LGV R+AD   +KSAFRK AR  HPDVND+P A E+F  I+ AY +L+D   RQRYDQFGEAG+G              QVD+SDIF+SFFGG              GDDLR DLD+DF +ACFG EEKVRIRHLE+C+TCTGSGVKPGS            V +Q TRTPLG FQTQ  C  C+G GQ+VDEYCG+CSGQG  E TKQVKV
Sbjct:   81 MEANFYADLGVPRAADEKAIKSAFRKKARSCHPDVNDSPEAKEEFQRINRAYEILSDPTMRQRYDQFGEAGVGTSDASPGGNPYGGQQVDISDIFESFFGGXXXXXXXRRSGPVPGDDLRFDLDIDFTTACFGGEEKVRIRHLETCDTCTGSGVKPGSQVRXXXXXXXXXVTMQVTRTPLGNFQTQQPCQVCKGTGQMVDEYCGTCSGQGRREVTKQVKV 300
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BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Match: A0A7S1V3D0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V3D0_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.550e-73
Identity = 127/244 (52.05%), Postives = 155/244 (63.52%), Query Frame = 1 
Query:    7 RDFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAA--------EKFNEISNAYSVLTDDEQRQRYDQFGEAGLG----------RGXXXXXXXXXFDQVDLSDIFDSFFG--------------------GGGMGDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNTCGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLVEKTKQVKV 624
            RDFY++LGV R AD S +K  +   A+++HPD +  PNA         +KF +I+ A  VLTDD+ R++YDQFGEAG+G           G          ++VDL DIFDSFFG                    G  +GDDLR DL++DFK+A FG EEKVRIRHLE C TC G G+KPG+  NTC  CGGSGV IQ TRTPLG FQTQ TCP CRG GQ V+EYCG+CSGQG+V K+KQ+KV
Sbjct:   37 RDFYKILGVPRDADKSAIKKGYYAAAKKFHPDRH--PNATPEEKAEFTKKFQDINRAKEVLTDDQLREKYDQFGEAGIGTSAMSDEQAKNGFGPGFGGGFGEEVDLGDIFDSFFGXXXXXXXXXXXXXXARTRTRGPIVGDDLRFDLEIDFKTAVFGGEEKVRIRHLEKCGTCDGDGIKPGARVNTCSACGGSGVTIQVTRTPLGNFQTQQTCPQCRGTGQEVEEYCGTCSGQGVVTKSKQIKV 278
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BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Match: A0A7S3ZW96_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZW96_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.280e-72
Identity = 123/223 (55.16%), Postives = 145/223 (65.02%), Query Frame = 1 
Query:    1 MGRDFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAAEKFNEISNAYSVLTDDEQRQRYDQFGEAGLGRGXXXXXXXXXFDQVDLSDIFDSFF---------------GGGGMGDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNTCGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLVEKTKQVKV 624
            M RD YE LGV R +D   +K AFR  AR++HPDVND P AAE++ EIS AY+ L+D +++QRYD +GE GLG G X         +V+L DIFDSFF                G   GDDLR DL+LDFK+ACFG +EKVRI HLE C TC GSGVKPG+   +        VV+Q TRTPLG+FQTQT CPTCRG GQ VD YC  CSGQG+  K KQV V
Sbjct:   46 MARDLYETLGVPRGSDERTIKRAFRDAARKWHPDVNDTPEAAERYKEISQAYATLSDPDKKQRYDMYGETGLGGGGXPGGGV----EVNLEDIFDSFFXXXXXXXXXXXXXQQNGPIQGDDLRADLELDFKTACFGGQEKVRISHLEKCETCEGSGVKPGAQVRSXXXXXXXXVVMQVTRTPLGSFQTQTVCPTCRGGGQSVDAYCTQCSGQGVSRKAKQVSV 264
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BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Match: A0A7S3PUS4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUS4_9STRA)

HSP 1 Score: 234 bits (597), Expect = 4.280e-72
Identity = 120/233 (51.50%), Postives = 147/233 (63.09%), Query Frame = 1 
Query:   10 DFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAAEKFNEISNAYSVLTDDEQRQRYDQFGEAGLGR--------GXXXXXXXXXFDQVDLSDIFDSFFGGGGM--------------------GDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNTCGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLVEKTKQVKV 624
            DFY VLGV R AD   +K+A+R+ A++YHPD N   +  E+F E++ AY VL   + +Q+YD +G AG+G         G           +VDL DIFDSFFGG                       GDDLR D ++DFK+A FG EEKVRIRHLE C+TC G+GVKPGS  +TCG C G GV +Q TRTPLG FQTQ TC TCRG GQ V+EYCG+CSG+GL  KTKQ+KV
Sbjct:   68 DFYNVLGVRRDADAKTIKTAYRQKAKQYHPDANPGKDTTEQFQEVNRAYEVLNTPDLKQKYDMYGSAGVGTSAASDQQAGSPFGGPGGFGQEVDLGDIFDSFFGGXXXXXXXXXXXXXQRQRTRGPVAGDDLRFDSEIDFKTAIFGGEEKVRIRHLEKCDTCEGNGVKPGSKVSTCGVCNGMGVTMQVTRTPLGNFQTQQTCSTCRGTGQKVEEYCGTCSGKGLNSKTKQIKV 300
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2127.6492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFN1_ECTSI4.150e-10576.34Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=287... [more]
B5Y3P1_PHATC1.340e-7956.58Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A835YPT5_9STRA1.250e-7860.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YE72_AURAN7.860e-7756.71Uncharacterized protein n=2 Tax=Aureococcus anopha... [more]
A0A7S2A588_9STRA3.840e-7554.51Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID... [more]
A0A1Z5KP79_FISSO1.010e-7352.61Molecular chaperone DnaJ n=2 Tax=Fistulifera solar... [more]
A0A7S1FNN1_9STRA1.320e-7357.73Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S1V3D0_9STRA2.550e-7352.05Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S3ZW96_9STRA1.280e-7255.16Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3PUS4_9STRA4.280e-7251.50Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2127contigL-elsbetiae_contig2127:318..5414 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.0
Seed ortholog evalue3.1e-65
Seed eggNOG ortholog2850.Phatr13424
KEGG koko:K03686
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009941,GO:0016020,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.DnaJ central domain
EggNOG OGs2XBB9@2836,COG0484@1,KOG0715@2759
Ec32 ortholog descriptionHeat shock protein 40
Ec32 orthologEc-04_001500.1
COG Functional cat.O
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029,ko03110
Exons6
Model size627
Cds size627
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2127.6492.1prot_L-elsbetiae_contig2127.6492.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2127 318..5414 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815871.0387208-CDS-L-elsbetiae_contig2127:317..3891622815871.0387208-CDS-L-elsbetiae_contig2127:317..389Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 318..389 -
1691683158.477603-CDS-L-elsbetiae_contig2127:317..3891691683158.477603-CDS-L-elsbetiae_contig2127:317..389Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 318..389 -
1622815871.05206-CDS-L-elsbetiae_contig2127:1244..14241622815871.05206-CDS-L-elsbetiae_contig2127:1244..1424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 1245..1424 -
1691683158.489352-CDS-L-elsbetiae_contig2127:1244..14241691683158.489352-CDS-L-elsbetiae_contig2127:1244..1424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 1245..1424 -
1622815871.0656986-CDS-L-elsbetiae_contig2127:2396..24611622815871.0656986-CDS-L-elsbetiae_contig2127:2396..2461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 2397..2461 -
1691683158.5007849-CDS-L-elsbetiae_contig2127:2396..24611691683158.5007849-CDS-L-elsbetiae_contig2127:2396..2461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 2397..2461 -
1622815871.0770736-CDS-L-elsbetiae_contig2127:3211..32631622815871.0770736-CDS-L-elsbetiae_contig2127:3211..3263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 3212..3263 -
1691683158.5092146-CDS-L-elsbetiae_contig2127:3211..32631691683158.5092146-CDS-L-elsbetiae_contig2127:3211..3263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 3212..3263 -
1622815871.0876224-CDS-L-elsbetiae_contig2127:3958..40571622815871.0876224-CDS-L-elsbetiae_contig2127:3958..4057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 3959..4057 -
1691683158.517371-CDS-L-elsbetiae_contig2127:3958..40571691683158.517371-CDS-L-elsbetiae_contig2127:3958..4057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 3959..4057 -
1622815871.0976002-CDS-L-elsbetiae_contig2127:5255..54141622815871.0976002-CDS-L-elsbetiae_contig2127:5255..5414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 5256..5414 -
1691683158.5251696-CDS-L-elsbetiae_contig2127:5255..54141691683158.5251696-CDS-L-elsbetiae_contig2127:5255..5414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2127 5256..5414 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2127.6492.1

>prot_L-elsbetiae_contig2127.6492.1 ID=prot_L-elsbetiae_contig2127.6492.1|Name=mRNA_L-elsbetiae_contig2127.6492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp
MGRDFYEVLGVERSADTSELKSAFRKLAREYHPDVNDAPNAAEKFNEISN
AYSVLTDDEQRQRYDQFGEAGLGRGGGGGGGGAGFDQVDLSDIFDSFFGG
GGMGDDLRVDLDLDFKSACFGIEEKVRIRHLESCNTCTGSGVKPGSSSNT
CGQCGGSGVVIQATRTPLGAFQTQTTCPTCRGAGQVVDEYCGSCSGQGLV
EKTKQVKVR
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mRNA from alignment at L-elsbetiae_contig2127:318..5414-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2127.6492.1 ID=mRNA_L-elsbetiae_contig2127.6492.1|Name=mRNA_L-elsbetiae_contig2127.6492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5097bp|location=Sequence derived from alignment at L-elsbetiae_contig2127:318..5414- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGAAGGGACTTCTACGAGGTCCTCGGCGTGGAGAGGAGCGCCGACAC
GTCGGAGCTGAAGTCCGCCTTCAGGAAGCTCGCCAGAGAGTACCATCCTG
ACGTGAACGACGCGCCCAACGCCGCAGAGAAATTCAATGAAATCAGCAAC
GCTTACTCGGTGAGTCTTTGGGGCCTCGGCGGCACCTGCTGCCAGTGGGC
TGTGTCTGTGTGTTTGTGTGTTTGTTTATGCGCGTTTGTGCTAGCAGTTT
TTTGGAAACCAACCTGAGGTGCGGGCTAGGTATATTATTGGGAGCACCGG
TTGCGGCGTGTGTGTTCCTGCTGTCTTCATGTGTTCATGTGCAACACCCC
CGACACGCACACGAGATATTATAGGGTGCGCGGCCGGTGCGTCTTGCGTG
GACATACATATTTCGGCTGCCACTCCAAGCACATTCGCCCGACGTTGATA
TGAGCGGCTCCCTGATTGAAATGATGGTGTTTCAGTTGGCAGCGCGATTT
GCCAGCAGTACGTACCGTAGGTGACACAAGATACCACACCCCTTGGGACA
TATTTTCAAAGCGCGATTCCTCCCCAGCAAGAAGAGTGCCGGTGTCGAAA
GGGGTGGCGTTGGAAGGATCTAGTCGAGGGCTGTCCGAAAATGAGTCGGT
TAGTGCTGGCACCCTCTTCGTTACGGACTAATGGAGCTCTCAAACTCGGT
CCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAGTCACGTGCATTGTAA
CGTAACCGTAGTCAGACCAACCTGCGACTCTCTCTCTTCTTGATATTGTG
TGTGTCACGTTGCCTCCGCGCTCTCATCAATTCGTTGGGTAATTGCAGTT
GCAGTTGGTTGTCGCTTTCATCGCTTCGGCTGTCAAAGGGATAACATACA
AAAAAATAAATGTTGGACTGTATGCGGAAGAGGTTTACAGCAGCATAGTA
CCTTATACGACAAGAGATTACACACCCCCTTGGAACGATTTTCAAAGCTC
GGTTACTCCGCAACGATTAGATATGGTTCTGATACGGAACGATACTTTTT
CGGACAGCTCTCGATGATATCTTTGTAACGCCGCCCTCTGTTTTCGGGAC
TAACACTCTTCTCGCTGTGGAGTACTTCAGCTTTGAAATCGGTTCGGTCC
CGGGGGTTGGTGTGTTACCTTGTGTCGTTACGGCACTCTGGGTGTGTGTT
CGACCTCGGTGTACATTGCACCCACACGTGAGGCTGTGCTGACAGGCGTA
TGTATGTTGGCACTTTCTCCCGCCGCGGCCGGAAAACATTCAACCCAACC
CCCCTCCGGTGTTTTTGTTTTTTGTTTCCTCTATTGAAACTGACCTCGTG
AAAACAGGTCTTGACCGACGATGAACAGAGGCAGCGGTACGACCAGTTCG
GGGAGGCGGGCCTCGGAAGGGGCGGAGGAGGAGGAGGAGGGGGTGCAGGT
TTCGATGTGAGGGAAAAAACATTCGCGCGGGTGTGGTCCTCCCATGCTCT
TGAGCGTCGCGAAGCCGTGAACAGCAGTGCACAGAACGGCCCTTGTGTGT
TTTTGTGTATGCTCGCCAGCCAGCAACCCAGCTTGGCGCATGGTAGATCT
CGCGCAGCAGCAGTGCGTTCGTTTTGGCCCATGGGGCCCCCCGACACTCG
TTTACATGCCGCACCAAAGCTGTCAGACCCAGCGGAGATGCCTCGGTGTA
CCCCCGACGATAGCGCTTCTTTAGGCCAGTGCAGGTCTGTGTCGGGTCGC
GTTACGCTTTTCTACGGGCGGGGTTGGGTTGTTCGATCTTGTACATTTGT
AGCGGGCACGAAGAAGGTAGTACAGCAGTAGATACGTACATACTTTACCC
GCCTGGCTCGTGCGACTCCCACCTCGCTGTTTTTTTTTCTGACCAGCGGC
AGAGTATGTATGTTCCTCTGCAAACACGTTCCTGCGTGAGTGGATGCGTG
ATGCCACTGGCGCCGGTCCCGTCCCGTCCTTCTTCCCCCTCCATCCGCGC
CCAAAACTTCGCGAACACACATTTTTTTCCTTTATCGTTTTTTTGTTGCG
CAGTGTCCTTCTGTGCGTGTCCACTGGGACAATTACAATTCCATCAATTC
TCACCCATCATTTTTCGTATATAACACCCAAATGAAAACTACGTTTTTCA
GCAAGTGGACCTGTCGGACATCTTCGACAGCTTCTTCGGCGGGGGTGGCA
TGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGCGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGAGGGGTAAAGGGCGGTGTGTTCATTGTCTCATTGTC
CTTCAAATGGCGCACATGGGTTTCCACACAGGCCTGCACATGACAGAGAC
GCTCTTGTATCCTATTGTACAGCAACGGACGTTCTGCAATGCCGCACATG
AGTCTTCACACACAGTCAACACAAGGCATGAGATACATGAGAGAGACCAG
ACAAAATCGTATCTCCAGCAACAAATCCTGAGCGACCACGTGTGTACATG
GTGTACGGTATGTATGTATTTATGTCGCACATTGTCGTTCGCCAGGCAGA
CAAAGATCAAAGACCACTGCTGCGTATTCGCCCTTGCCCCTCCCCCAGTC
GCTCACGAAGTGGATAGTGTGGTGCCGAAAAGACATGTGGCAGTTGTCCC
GCCGGCGAACATGAGCAGTCTTGGTCCGAAATGCATGAAAAAAATAAAAT
AAAATATGAAAGATTCGTTCCACGGGGGACTAAATACTGCTGTAGGCAGA
CCAACCCCCCCTTTCTTACCGTCCCAAACAAAAAACGGACACAAAACCGA
CATCCGTGTACATACTTTGCTGTTCGCTTGCTTGTTGGTGGGTTTATTTG
GCGGAGCGTGTTATTTAACGCGTGTGTGTTTTCTCAACTTTTTTATTTTC
AAGGTGATGATCTCCGGGTGGACCTCGACCTTGACTTCAAGTCCGCCTGC
TTCGGCATTGAGGAGAAGGTGAGTCCGGTGGCTATATACCGCCCGTCCGC
TACCACCCACCCACTGCGAGTGCGTCCAGTAGATACCCACCGCCTCTCCT
GCTACCGGTATACCCTAGGTGACATAAGATAAGACACCCCCTGGACCGGC
TTTCAAAGCTCAAGTACTCCACAGCAAGCAGAGCGCCAGTCCCGAAGAGG
GCAGCGTTGGAAAGATCTCGTCGAGAGCTTTCCGAAAATGTGGCGTTTGT
GGTTAGAATCGTATTCGTTGCGGAGTAACCAAGCTTTCAATATCGGTCCA
GGGGGTGTCTTGTCTTATGTCACCTACGGTACACGCTCTCTCTAAATACC
AGCGCCTGTCTCGGCCAAGTCCAGTCCTTGTCGCCCAGCGCGGACTAAAA
GCGAACCAAGCTGCGGCTTTCGATTCAAGAGTGCTGTGCTCTGGTTGGTT
TGTCACTGGCTTGGTATGTATTTTGTTTTGGAGCTGCGTCCGGGCCGGCC
ACCGTTGCTTCGGCCCATGAGAGGTCGGTCTGCGCCGGCGTCTTTTTCTT
TTAGCTTCACCGGTGTCGGCGTGTTGGCCCGCCCCACGCTGGAGATCAAC
GCTTTTGCTGATACGTATGCGCGTTATCTCTGTACGGTGGCTTGCGGTTT
CCCTGTGGCGCATCGAAAAAGTGTGTCGCACGTTGTATATATCGCACGAT
TTTGTCTCGTTGATCTATATATGTACATACGCCGCAGTTACGATCCAGCA
CTTCAGAGAGTGATGACGAGAAGAAGGTTTTATCCAAGACCCAGGTTTTT
CTTTCCACGCAAAGCCCACAGAGTTAGAGGACCGATTGCTGAAAGGCGGT
GTGATTAATAAGAAAAAAATGTGGGGCTTTCACGTGGCCAAAACCAAGAG
ACCAAAACCCGAAGACAGCGCGACGACCCGTGTGAATTAACTCATCGATG
CCACTACTGTGTAATGATTATGATTTTATCTCTCCCCCAGGTCCGCATCC
GCCACCTGGAGAGCTGCAACACGTGCACCGGCAGCGGCGTCAAGCCGGGG
TCGTCGTCCAACACCTGCGGGCAGTGCGGCGGCTCGGGGGTAGTCATCCA
GGCCACCCGGACCCCCCTCGGCGCCTTCCAGACGCAGACGACTTGTCCCA
CCTGCCGGGGGGCTGGTCAGGTGCGTTGGTATACCCCCCCCCAAAAAAAA
TATATATATCTTTGGAAATTAATCTCCTCACAGCATACTCACCACCTTCC
TGCTGTGCGAAGGCGCGACCATTTTTTTTAATATATTTTCTGTACTTTTT
GCCGGAGCTGTTGTTGTTGTGTTTGTTGCTGTTATGGTGGTGGTGGTTTC
GGTTCCGGCTGAATGTTAATGTTGCTGCCGACATTTTTTGGAGGGTCTGC
TCGCGTGTTGTGGCCGATCTACTTCCTGAAGTGGTGCGAACGTGTTTGCT
CTCCTCAGTCAAAGCATGTACCGTGGAGTGTAGGGGAGGGGAAGAGTATA
TGGCACGGGTCGGCTGGCCTGTACGTTTTGGGGGCTTTTGCGACCTCGAT
CTAAAATCCTGGCCGGGGGACGTGCCCTGGATCTTTTCTCGCCAACAAAA
CCGTAGCCAGATAGGTCCAAAAGTGCTGGCGGGGGGGGGGGGGGGGGGGG
GTGGGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATAA
ATAATACAACANNNNNNNNNNGGCCGGTGGCGCGGGCTCCGTTCCCTGCA
CACCAACAGAAAAAGGAGCGCAGACGGGGGCTGGTGGGGGGGGGGGGGGG
GGGGGGGGGGGGGTGTTCGGATCCTTTTTTTTCTCTTTTTTTTATTTTGT
TTTTCATGTAGATAAAATATCCACACACGTTTACCAGCCCTTTGCCTATA
TATTTTTTTGTCCCGTGTCTCTGTTGTACATACATCTGTGGCGAAGTGGA
CCCCTGCCGCTCGCTCTCGTCGTCAGCGGAGTTAAAACGAGAAACGAACG
TTTGCCTTTTGTTCTCCCCTCGCAGGTTGTGGATGAGTACTGCGGCTCTT
GTTCTGGTCAGGGCCTCGTGGAGAAGACCAAGCAGGTCAAGGTGAGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig2127:318..5414-

>mRNA_L-elsbetiae_contig2127.6492.1 ID=mRNA_L-elsbetiae_contig2127.6492.1|Name=mRNA_L-elsbetiae_contig2127.6492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1254bp|location=Sequence derived from alignment at L-elsbetiae_contig2127:318..5414- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGAAGGGACTTCTACGAGGTCCTCGGCGTGGAGAGGAGCGCCGACAC
GTCGGAGCTGAAGTCCGCCTTCAGGAAGCTCGCCAGAGAGTACCATCCTG
ACGTGAACGACGCGCCCAACGCCGCAGAGAAATTCAATGAAATCAGCAAC
GCTTACTCGATGGGAAGGGACTTCTACGAGGTCCTCGGCGTGGAGAGGAG
CGCCGACACGTCGGAGCTGAAGTCCGCCTTCAGGAAGCTCGCCAGAGAGT
ACCATCCTGACGTGAACGACGCGCCCAACGCCGCAGAGAAATTCAATGAA
ATCAGCAACGCTTACTCGGTCTTGACCGACGATGAACAGAGGCAGCGGTA
CGACCAGTTCGGGGAGGCGGGCCTCGGAAGGGGCGGAGGAGGAGGAGGAG
GGGGTGCAGGTTTCGATGTCTTGACCGACGATGAACAGAGGCAGCGGTAC
GACCAGTTCGGGGAGGCGGGCCTCGGAAGGGGCGGAGGAGGAGGAGGAGG
GGGTGCAGGTTTCGATCAAGTGGACCTGTCGGACATCTTCGACAGCTTCT
TCGGCGGGGGTGGCATGGCAAGTGGACCTGTCGGACATCTTCGACAGCTT
CTTCGGCGGGGGTGGCATGGGTGATGATCTCCGGGTGGACCTCGACCTTG
ACTTCAAGTCCGCCTGCTTCGGCATTGAGGAGAAGGTGATGATCTCCGGG
TGGACCTCGACCTTGACTTCAAGTCCGCCTGCTTCGGCATTGAGGAGAAG
GTCCGCATCCGCCACCTGGAGAGCTGCAACACGTGCACCGGCAGCGGCGT
CAAGCCGGGGTCGTCGTCCAACACCTGCGGGCAGTGCGGCGGCTCGGGGG
TAGTCATCCAGGCCACCCGGACCCCCCTCGGCGCCTTCCAGACGCAGACG
ACTTGTCCCACCTGCCGGGGGGCTGGTCAGGTCCGCATCCGCCACCTGGA
GAGCTGCAACACGTGCACCGGCAGCGGCGTCAAGCCGGGGTCGTCGTCCA
ACACCTGCGGGCAGTGCGGCGGCTCGGGGGTAGTCATCCAGGCCACCCGG
ACCCCCCTCGGCGCCTTCCAGACGCAGACGACTTGTCCCACCTGCCGGGG
GGCTGGTCAGGTTGTGGATGAGTACTGCGGCTCTTGTTCTGGTCAGGGCC
TCGTGGAGAAGACCAAGCAGGTCAAGGTGAGAGTTGTGGATGAGTACTGC
GGCTCTTGTTCTGGTCAGGGCCTCGTGGAGAAGACCAAGCAGGTCAAGGT
GAGA
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