mRNA_L-elsbetiae_contig2121.6471.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2121.6471.1
Unique NamemRNA_L-elsbetiae_contig2121.6471.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Match: D7FYI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI2_ECTSI)

HSP 1 Score: 522 bits (1345), Expect = 3.790e-181
Identity = 261/285 (91.58%), Postives = 276/285 (96.84%), Query Frame = 1
Query:    1 QVDGVRNAKVHSIFFEDLPITSAAFTGVDQAIVTGRRSFFYSYDVATGKVMKVPRVFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTTSISTTGSTSSS-QKLTAIGSDSGVVNVYDADALETGKRVLRPTPLKAVMSLATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRMRHYPQA 852
            QVDGVRNAKVHSIFFEDLPITSAAFTG +QAIVTGRRSFFYSYDV TGKV+K+PRVFSSGR EKH+ETFAASPDGQWLAFIGSGGYVLLLSSK+KQWAADFKLNSTATAVTFSPDSRYVLAS ADADVYKFDIRSRRCVLRFFNEGGT T+S+++ G TSSS Q+LTA+GSDSGVVNVYDADALETGKRVLRP+PLKAVMSL TPVTTTKFSPDGQMLAIASNQ+RDALKV+HSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYR+RHYPQA
Sbjct:   61 QVDGVRNAKVHSIFFEDLPITSAAFTGAEQAIVTGRRSFFYSYDVVTGKVLKIPRVFSSGRTEKHLETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASGADADVYKFDIRSRRCVLRFFNEGGTCTSSLASKGPTSSSPQRLTAVGSDSGVVNVYDADALETGKRVLRPSPLKAVMSLTTPVTTTKFSPDGQMLAIASNQQRDALKVVHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPQA 345          
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Match: A0A6H5KQH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH1_9PHAE)

HSP 1 Score: 518 bits (1333), Expect = 8.150e-176
Identity = 259/285 (90.88%), Postives = 274/285 (96.14%), Query Frame = 1
Query:    1 QVDGVRNAKVHSIFFEDLPITSAAFTGVDQAIVTGRRSFFYSYDVATGKVMKVPRVFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTTSISTTGSTSSS-QKLTAIGSDSGVVNVYDADALETGKRVLRPTPLKAVMSLATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRMRHYPQA 852
            QVDGVRNAKVHSIFFEDLPITSAAFTG +QAIVTGRRSFFYSYDVATGKV+K+PRVFSSGR EKH+ETFAASPDGQWLAFIGSGGYVLLLSSK+KQWAADFKLNSTATAVTFSPDSRYVLAS ADADVYKFDIRSRRCVLRFFNEGGT T+S++  G TSSS Q+LTA+GSDSGVVNVY+ DALETGKR+LRP+PLKAVMSL TPVTTT FSPDGQMLAIASNQKRDALKV+HSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYR+RHYPQA
Sbjct:  293 QVDGVRNAKVHSIFFEDLPITSAAFTGAEQAIVTGRRSFFYSYDVATGKVLKIPRVFSSGRTEKHLETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASGADADVYKFDIRSRRCVLRFFNEGGTCTSSLAVKGPTSSSPQRLTAVGSDSGVVNVYNDDALETGKRILRPSPLKAVMSLTTPVTTTLFSPDGQMLAIASNQKRDALKVVHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPQA 577          
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Match: A0A835Z2C0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2C0_9STRA)

HSP 1 Score: 308 bits (788), Expect = 2.520e-96
Identity = 154/286 (53.85%), Postives = 203/286 (70.98%), Query Frame = 1
Query:    1 QVDGVRNAKVHSIFFEDLPITSAAFTGVDQAIVTGRRSFFYSYDVATGKVMKVPRVFSS-GRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTTSISTTGSTSSSQKLTAIGSDSGVVNVYDADALETGKR----VLRPTPLKAVMSLATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRMRHY 843
            QVDG  N+KVH +  +DLPIT AAFT  DQ I++G +  FY YDV +G V +VP + ++ G+A+  +  FA SP+G+W+AF  S GY++L+S+K+KQWAADFKLN +  A+ FSPDSRY+LAS  DA+VYKFD+R  RCV R +NEGGT TT +    S     +  A+GS+SGVVN+YD+ A          V RP PL A+M+L TP T  KF+ D Q+LAIAS++K+DAL+++H  + T F NWPT+RTP+ YPF LDFSP   FLAVGND+G VLLYR+  Y
Sbjct:  110 QVDGEENSKVHGVMLKDLPITQAAFTADDQVILSGDKPHFYYYDVQSGVVQRVPSIRNAAGKAQSTLAKFALSPNGEWIAFAASAGYIMLVSAKTKQWAADFKLNCSVEALVFSPDSRYILASGRDAEVYKFDVRHSRCVQRMYNEGGTGTTGLDI--SPPQPHRYMAVGSESGVVNIYDSVAATAASAGSIGVYRPKPLHAIMNLTTPATIVKFNSDSQVLAIASSEKKDALRLVHVTTGTVFANWPTQRTPLGYPFCLDFSPSSNFLAVGNDKGRVLLYRLIPY 393          
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Match: W7T4E2_9STRA (U3 small nucleolar rna-associated protein 18 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4E2_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.360e-83
Identity = 154/298 (51.68%), Postives = 203/298 (68.12%), Query Frame = 1
Query:    1 QVDGVRNAKVHSIFFEDLPITSAAFT--GVDQA----IVTGRRSFFYSYDVATGKVMKVPRVFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTTSISTTGSTSSSQKLTAIGSDSGVVNVYDADAL-------ETGKRVLRPT----PLKAVMSLATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRMRHY 843
            QVDG RN KV  +FF+DLPI +AAF   G D++    +V+GRR FFY +D+  G   +VPR+   GR EK +E F ASPDGQWLAF G  GYV+L+ ++SKQWA +FK+N TA A+ FS D R+++AS  DA VY++D+RSRRC+ RF NEGGT T++++      +S  + A+G++SGVVN+Y+ +A+       E G      T    P KA+  L T V T  F+ DG +LA+AS   RDAL+V+H  S T F+NWPT +TP+RYP AL FSP  G LAVGNDRG VLLYR+RHY
Sbjct:  326 QVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLM--GREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALA------ASAGMLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHY 615          
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Match: A0A7S3QBK5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBK5_9STRA)

HSP 1 Score: 259 bits (661), Expect = 5.490e-75
Identity = 127/274 (46.35%), Postives = 194/274 (70.80%), Query Frame = 1
Query:   25 KVHSIFFEDLPITSAAFTG-VDQAIVTGRRSFFYSYDVATGKVMKVPRVFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTTSISTTGSTSSSQKLTAIGSDSGVVNVYDADALETGKRVLRPTPLKAVMSLATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRMRHY 843
            KVH I F +LPI +A+F G     +V+GRR FFY YD+ +GK+ KVPR+   GR EK +E F  SPDG  +AFIG+ GY++L+ +KSK W ADFK+N +A AV+FSP   ++++S +D DVY++D+RS++CV +F N+ GT T+ +S T       + TA+G++SGVVN+Y   A    KR    TP+K++M+L T +   KF+P G +LA++S +++D+LK++H  + T F+NWPT +TP+ Y +++DFSP   F+A+GND+G  +LY+++HY
Sbjct:  354 KVHGIHFPNLPIHTASFLGDTGSVVVSGRRPFFYIYDMISGKIDKVPRI--QGRKEKSLEKFTTSPDGSLIAFIGNDGYIILVEAKSKMWVADFKMNGSARAVSFSPCGDFIISSGSDGDVYRWDLRSKKCVDKFQNQDGTITSFVSAT------SRFTAVGAESGVVNLYHDRAPAFKKR----TPVKSIMNLQTSIDHMKFNPTGDILAMSSQREKDSLKLLHVPTQTVFSNWPTSKTPLGYVWSIDFSPKSKFMAIGNDKGKCMLYKLQHY 615          
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Match: A0A7S2GVY7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVY7_9STRA)

HSP 1 Score: 253 bits (647), Expect = 3.570e-74
Identity = 129/281 (45.91%), Postives = 193/281 (68.68%), Query Frame = 1
Query:    4 VDGVRNAKVHSIFFEDLPITSAAFT-GVDQAIVTGRRSFFYSYDVATGKVMKVPRVFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTTSISTTGSTSSSQKLTAIGSDSGVVNVYDADALETGKRVLRPTPLKAVMSLATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRMRHY 843
            VDG ++ KVHSIF  D P+ SA++T G D+ IV+GRR FFY YD   G V KV ++  +GR+++ +E   ASPD + +AF  + GYV+L  +++KQW+ +FK+N TA ++++SP SRY+LAS  DA+VY +D+R  RCV  + NEGGT T++++ T       K+ A+ S+SGVVN++D      G     P P +AVM+L TPV T  F+ DGQ+LA+AS   +D+++++H  + T F+NWP+ +TP+ Y F+  FS   G++A+GND+G VLLYR+ HY
Sbjct:  225 VDGAKSQKVHSIFLPDCPVHSASWTRGGDEVIVSGRRPFFYVYDAINGDVRKVGKL--AGRSDRSLEKAWASPDQKMVAFTANNGYVVLADARTKQWSQEFKINGTARSLSWSPCSRYLLASGGDAEVYTYDLRRSRCVSHWLNEGGTVTSAMACT------DKVLAVASESGVVNIFDHAF--PGPSSANPKPSRAVMNLTTPVETLTFNHDGQLLALASRWSKDSMRILHVPTRTVFSNWPSSKTPLSYVFSAAFSSRSGYMAIGNDKGKVLLYRLNHY 495          
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Match: A0A7S1CWG3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CWG3_CYCTE)

HSP 1 Score: 247 bits (630), Expect = 1.590e-73
Identity = 127/276 (46.01%), Postives = 185/276 (67.03%), Query Frame = 1
Query:   19 NAKVHSIFFEDLPITSAAFTGVD-QAIVTGRRSFFYSYDVATGKVMKVPRVFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTTSISTTGSTSSSQKLTAIGSDSGVVNVYDADALETGKRVLRPTPLKAVMSLATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRMRHY 843
            + K+H I F  LPI SA+F G     +V+GRR FFY YD   GK+  VPR+   GR EK +E FAASPDG+ +AF+G+ GY++L+ +KSKQW AD K+N +  AV F+PDS  +L+S +D DVY++D+R+RRCV RF NE GT  ++++       S+K  A+G++SGVVN+Y   A           PLK++M L T    ++F+ DGQ+LA ++ +++  LK++H  + T F+NWPT +TP+ Y +++DFSP   FLA+GND G  LLY++ HY
Sbjct:   80 STKIHGIHFPKLPIYSASFLGDSGNVVVSGRRPFFYIYDSVAGKLDLVPRIM--GREEKSLERFAASPDGRTIAFVGNDGYIILVDAKSKQWMADLKMNGSVRAVAFTPDSECLLSSGSDGDVYRWDLRTRRCVERFSNEDGTIVSTLAV------SRKHLAVGAESGVVNLYQERAASERN------PLKSIMHLHTSNDFSRFNHDGQILAFSTQREKHGLKLLHVPTQTVFSNWPTSKTPLGYVWSMDFSPSSKFLAIGNDGGKCLLYKLNHY 341          
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Match: A0A8H7UD78_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UD78_MORIS)

HSP 1 Score: 249 bits (636), Expect = 1.170e-71
Identity = 129/285 (45.26%), Postives = 189/285 (66.32%), Query Frame = 1
Query:    1 QVDGVRNAKVHSIFFEDLPITSAAFTGV-DQAIVTGRRSFFYSYDVATGKVMKVPRVFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTTSISTTGSTSSSQKLTAIGSDSGVVNVYDADALETGKRVLRPTPLKAVMSLATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRMRHYPQA 852
            Q+DG  N K+ S++F+DLPI ++AF    DQ + TGRR ++Y YDV +G V +   V+  GR ++ +E F+ SP G+++AF+G  GY++L+S K+KQW A+ K+NS+  +V +S D +Y+     D +VY+FDI  R CV R+ ++G    +++S     S ++   A+GS SGVVNVY  D L T   V  PTPLKA+ +L T V   KF+ D Q++ I+SN+KRD  +++H  S T F+NWPT  TP+ Y  + DFSP  G+LA+GND+G VLLYR+ HYP A
Sbjct:  308 QIDGKVNHKIQSVYFKDLPIHASAFHPQGDQIVATGRRKYYYIYDVQSGSVDRSSGVW--GREDRSLEQFSMSPCGRYIAFLGRDGYIILVSFKTKQWIANLKMNSSVHSVDWSADGKYIWGVGIDGEVYQFDIAQRACVHRWMDDGAFKPSAMSV----SPNEDYYAVGSKSGVVNVYGRDVLNTN--VFNPTPLKALGNLTTRVHHIKFNHDSQLMGISSNRKRDQFRLVHLPSLTVFSNWPTAATPLSYVSSFDFSPRSGYLAIGNDKGRVLLYRLNHYPSA 584          
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Match: A0A388JUK5_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JUK5_CHABU)

HSP 1 Score: 246 bits (628), Expect = 4.070e-71
Identity = 129/285 (45.26%), Postives = 186/285 (65.26%), Query Frame = 1
Query:    1 QVDGVRNAKVHSIFFEDLPITSAAFTGVD-QAIVTGRRSFFYSYDVATGKVMKVPRVFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTTSISTTGSTSSSQKLTAIGSDSGVVNVYDADALETGKRVLRPTPLKAVMSLATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRMRHYPQA 852
            Q+DG  N KV  IF +++P+  AAF+G   +   +G R F+Y YD+  G+V +V  +   GR E+ +ETF  SPD    AF+G  GYV+L+S ++KQW A+ K+N TA  + F+   + ++ S +D D+Y +D+R+R+C+ +  +EG    T+I++    S   +  A G D+GVVNVYD     +GKR     PLKA+M+L T V   KF+ D Q+LA++SN  RDAL+++H  S T F+NWPT RTP+ Y  +LDFSPGGGFLAVGN +G  LLYR+RHY +A
Sbjct:  249 QLDGKHNPKVQGIFLDNMPVQKAAFSGDGLKVFASGGRKFYYVYDILGGRVERVDNIM--GREERSLETFELSPDNNVAAFLGKDGYVMLVSQRTKQWIANLKMNGTARTLAFTAGGQELITSGSDGDIYHWDMRTRQCIDKGKDEGCVRATAIAS----SLDGRYMATGGDTGVVNVYDRHKYLSGKR----DPLKALMNLTTWVNCVKFNHDAQILAMSSNNNRDALRLVHVPSLTVFSNWPTTRTPLAYIHSLDFSPGGGFLAVGNSQGRALLYRLRHYDRA 523          
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Match: A0A1Y1XWN0_9FUNG (WD40 repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XWN0_9FUNG)

HSP 1 Score: 242 bits (618), Expect = 1.410e-70
Identity = 122/285 (42.81%), Postives = 188/285 (65.96%), Query Frame = 1
Query:    1 QVDGVRNAKVHSIFFEDLPITSAAFTGV-DQAIVTGRRSFFYSYDVATGKVMKVPRVFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTTSISTTGSTSSSQKLTAIGSDSGVVNVYDADALETGKRVLRPTPLKAVMSLATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRMRHYPQA 852
            Q+DG  N K+ S+ F+DLPI  AAFT   +Q +++GRR +FY+YDV  G++ K+  +   GR EK +E F  SPDG+++AF G  GY++L+S ++KQW A+ K+N    ++ +S D RY+ +   D ++Y++D+++ RC+ +F + GG   + IS     S++    A GS SG+VN+Y++ +L++      P P+K++M+L T VT  KF+ D Q+L I+S  K+D  +++H  S T F NWPT  TP+ Y  A DFSP  G+LA+GND+G VLLYR+ HYP A
Sbjct:  165 QIDGKINNKIQSVHFKDLPIHQAAFTPEGNQILLSGRRKYFYAYDVEAGQITKISGI--RGREEKSLEKFKVSPDGEYIAFQGREGYIVLVSQRTKQWVANLKMNGQVRSIDWSADGRYLYSIGTDTEIYQWDMKTMRCMKKFPDYGGYRPSIISV----SNTNGYYACGSQSGIVNIYESASLQSTDS---PQPVKSIMNLTTNVTAMKFNHDSQILGISSRAKKDQFRLVHMPSMTVFNNWPTHGTPLSYVNAFDFSPESGYLAIGNDKGKVLLYRLGHYPVA 440          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2121.6471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYI2_ECTSI3.790e-18191.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQH1_9PHAE8.150e-17690.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z2C0_9STRA2.520e-9653.85WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
W7T4E2_9STRA1.360e-8351.68U3 small nucleolar rna-associated protein 18 n=2 T... [more]
A0A7S3QBK5_9STRA5.490e-7546.35Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2GVY7_9STRA3.570e-7445.91Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1CWG3_CYCTE1.590e-7346.01Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8H7UD78_MORIS1.170e-7145.26Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A388JUK5_CHABU4.070e-7145.26Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A1Y1XWN0_9FUNG1.410e-7042.81WD40 repeat-like protein n=1 Tax=Basidiobolus meri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2121contigL-elsbetiae_contig2121:503..8464 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score434.5
Seed ortholog evalue3.2e-119
Seed eggNOG ortholog2880.D7FYI2
Preferred nameUTP18
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11422,ko:K14553
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko03008,map00310,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000151,GO:0000462,GO:0001674,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007399,GO:0007405,GO:0008150,GO:0008152,GO:0008283,GO:0008356,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016070,GO:0016072,GO:0017145,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022613,GO:0030154,GO:0030490,GO:0030532,GO:0030684,GO:0030686,GO:0031090,GO:0031461,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032040,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0034388,GO:0034470,GO:0034641,GO:0034660,GO:0042078,GO:0042254,GO:0042274,GO:0042585,GO:0043073,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0044703,GO:0046483,GO:0048132,GO:0048468,GO:0048477,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0051301,GO:0051704,GO:0061351,GO:0070013,GO:0071704,GO:0071840,GO:0072089,GO:0080008,GO:0090304,GO:0098722,GO:0098728,GO:0120114,GO:1901360,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EggNOG OGsKOG2055@1,KOG2055@2759
EC2.1.1.43
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03036
Exons6
Model size1674
Cds size705
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2121.6471.1prot_L-elsbetiae_contig2121.6471.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2121 2678..7645 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815869.614912-UTR-L-elsbetiae_contig2121:502..5921622815869.614912-UTR-L-elsbetiae_contig2121:502..592Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2121 503..592 +
1691683157.6079054-UTR-L-elsbetiae_contig2121:502..5921691683157.6079054-UTR-L-elsbetiae_contig2121:502..592Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2121 503..592 +
1622815869.6255076-UTR-L-elsbetiae_contig2121:2617..26771622815869.6255076-UTR-L-elsbetiae_contig2121:2617..2677Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2121 2618..2677 +
1691683157.6254141-UTR-L-elsbetiae_contig2121:2617..26771691683157.6254141-UTR-L-elsbetiae_contig2121:2617..2677Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2121 2618..2677 +
1622815869.6925972-UTR-L-elsbetiae_contig2121:7645..84641622815869.6925972-UTR-L-elsbetiae_contig2121:7645..8464Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2121 7646..8464 +
1691683157.6848474-UTR-L-elsbetiae_contig2121:7645..84641691683157.6848474-UTR-L-elsbetiae_contig2121:7645..8464Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2121 7646..8464 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815869.6377943-CDS-L-elsbetiae_contig2121:2677..27801622815869.6377943-CDS-L-elsbetiae_contig2121:2677..2780Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2121 2678..2780 +
1691683157.6361074-CDS-L-elsbetiae_contig2121:2677..27801691683157.6361074-CDS-L-elsbetiae_contig2121:2677..2780Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2121 2678..2780 +
1622815869.647902-CDS-L-elsbetiae_contig2121:3933..41151622815869.647902-CDS-L-elsbetiae_contig2121:3933..4115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2121 3934..4115 +
1691683157.6450295-CDS-L-elsbetiae_contig2121:3933..41151691683157.6450295-CDS-L-elsbetiae_contig2121:3933..4115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2121 3934..4115 +
1622815869.6577303-CDS-L-elsbetiae_contig2121:4844..49611622815869.6577303-CDS-L-elsbetiae_contig2121:4844..4961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2121 4845..4961 +
1691683157.654389-CDS-L-elsbetiae_contig2121:4844..49611691683157.654389-CDS-L-elsbetiae_contig2121:4844..4961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2121 4845..4961 +
1622815869.6727948-CDS-L-elsbetiae_contig2121:5839..59321622815869.6727948-CDS-L-elsbetiae_contig2121:5839..5932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2121 5840..5932 +
1691683157.6648126-CDS-L-elsbetiae_contig2121:5839..59321691683157.6648126-CDS-L-elsbetiae_contig2121:5839..5932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2121 5840..5932 +
1622815869.6836414-CDS-L-elsbetiae_contig2121:7435..76451622815869.6836414-CDS-L-elsbetiae_contig2121:7435..7645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2121 7436..7645 +
1691683157.6749885-CDS-L-elsbetiae_contig2121:7435..76451691683157.6749885-CDS-L-elsbetiae_contig2121:7435..7645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2121 7436..7645 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2121.6471.1

>prot_L-elsbetiae_contig2121.6471.1 ID=prot_L-elsbetiae_contig2121.6471.1|Name=mRNA_L-elsbetiae_contig2121.6471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp
MKVPRVFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKSKQWAAD
FKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTST
TSISTTGSTSSSQKLTAIGSDSGVVNVYDADALETGKRVLRPTPLKAVMS
LATPVTTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVR
YPFALDFSPGGGFLAVGNDRGCVLLYRMRHYPQA*
back to top

mRNA from alignment at L-elsbetiae_contig2121:503..8464+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2121.6471.1 ID=mRNA_L-elsbetiae_contig2121.6471.1|Name=mRNA_L-elsbetiae_contig2121.6471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7962bp|location=Sequence derived from alignment at L-elsbetiae_contig2121:503..8464+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGGACGGCGTGCGCAACGCCAAGGTGCACAGCATTTTCTTCGAGGA CCTGCCGATCACGAGCGCCGCTTTCACGGGGGTCGACCAGGTGAGAGAGC GGTGTTAAAAAAAACACCGACGTAGGTATGTAGGCGTCGACACGGCGACT CCAAGACGAAAAGCTTCAGTGCCGTACATAGGTGACACAAGATACCACAC CCCCTGGGCCGAGTTTTAGAGCTCCATTACTCCGTAACGAAGAAGGTGCC AGCACCAAACGGCACATTTACGGGCAGCCCTCGCCTAGATCTTTCCAACG CCACCCCCTTTTGGCACTGGCACTCTTCTTGCTGGAGAGGAATCGAGCTT TGAAAATCTGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAGTTAC AGCAGCAGCAGACGGTTTCTCTCCTTGTCTTCCCGCTGCCGCTATTGCCA CGGGGTGGATAATGCCCCCTCGGCTCTCGGCTCATGGTGTGTACCTCTTG TAAATGCCCTATGTAGTCCTATTAATGTTCGTTATTCCTGGTCAAGTGGT ACGCAACAGGCTAATATGTAGTCCTAATAATGTTCGTTGTTCCTGGTCAA GTGGTACGTAACAGGCTCAAAGCGTTACCTTATCAGCAGCCGAAGCGGTC GGTGCCTTGGCTCTAAATATTTAGCCTCAAAAGTTAAGTGGACCGTGACC CGACACTTGACACTTGTCCGCCGACACGTAGTTTTTTTTTGGTTTGTGTG TGGCGTAAACCGCGCGCGTCAATCCACCGGCCGGTCAAGGTTAAACGAAC CAACGTCAAGCTCCAGACTACCGTAGGTGACATAAGATAAGACACCCCCT GGACCGATATTGAACGCTTGGTTACTCCGCAACGAATACGATTCTAACCA CAAACGCCACATTTTCGGAAAGCTCTGGACGAGATCTTTCCAACGCCGCC CTTTTCGGGACTGACGCTCCGCTTGCTGTGGAGCACTTGAGCTTTGAAAA TCGGTCCAGGGGGTGTCTTATCTTATGTCACCTACGGTATCTGTGTCGTT TCTTTTGTTTGTTTATGCTTTGCTGACCCTTCGGGTCCACCTTTTTATTT TTCAGTACAGTAACATACCCTTTCTTGGAGTAAGATAGCCTGTGACCACA GGAATCGACCGCGTCGGGTGTTTGATTAGTACGGACGTATTTTTCGTGTA CCTTTTCTTGGGTGTAAGTTAGGTAGCCTGTGACCACGGGAATTGACCGC ATCAATTGTTGGAGTAGTATGTACGGACATTGAGCGGCACTGGATGCAGA GACCGGAACGGTTTCTAATGTGAAGACAACATACATACATACATACATAC ACACACATATGGAGGTACTGGATGGAAATATCGGAACGGTTTTTAATGTG AAGAAAACAACAACAACAACAACAACGTCAAAACTGGATCTGTTTTGCTG CGGTGCTACAGCAGTACATAATTGAAAGCGATTTCGTGAATAAATACTAC TTCGACTTCATTGTTGACGAGGGTGGGGAGTGCTGAACCCTGCTCGCGAT AAAAAAAAAAATACCCTAGGCAGGCACCGCAGGAGGGGGTCCAACCCCCC CCTCCTATGTAACCCCGGTTGGGTCGTATGGCTAGAGTAGAAGTGGAGGA TGGGGGCCAGAGGGGCAGACGACAAAATCCAATAATGGGCAGACAAAAAA ATAAATAAAAAAATAGTACCTGTGTGTCCTTCCTTCGCCTTCGGCTTGTT TCGGCGTTCCACGAGCGGCGCTCGACGCGGTCTTCGTGGCTGATGACCGA CCTGCCTATCATTACTTGGTGGTTCCGTGGCGCTGTTTTTTCCTTCGCGG ATGTTGTTGTTGTTGTTGTTGTTTCTCACATTAGCCTCTCTAGTCAGGAT GAATGTATTGGGGGCTCTGTCCGGGGAAGAAACTCGTCTGGAAGTCGCTG CCACCGCACGACCGACGGGTAAACGATTCTATTTGAACTATGTACGTGTG TTTTAAGTAGCTGCATTGGCAAAAGATCCCCCCCCCGACCCCGATCCTGA CACCCTCTACGCCCTCTCCACGATGTTGTCCCCGCCTGCCGAAAATGCGG TTTTGCCTCATTCAGGCGATAGTCACGGGCAGGCGGTCGTTTTTCTACTC TTACGACGTGGCCACCGGGAAGGTCATGAAGGTTCCCAGGGTTTTCTCGT CGGGGAGGGCGGAGAAGCACGTGGAGACCTTCGCGGCGTCGCCGGACGGG CAGTGGCTGGCGTTCATCGGGAGCGGAGGTGACCGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGCGCGTGACTGATTGGCCGGCGCGTGCACCGTGTGCCG ACGCTGATTCCTTTTGAGTGCTCTTGGGATGACGGAGCACGCTGTGTGTC TGCCTGTCTGTCTGTCTGTCTGTCTGTTTGTTCTCACGGATACATACCAA CATATTTATATATTACTTCGAAGTATGTATATATACGAAGTCGTGGAACA CTCTGCGGGAATAGCGGGCTTGGTGTGCTTGTGGATGGTGGGGGGCTGGT GCTGGTGCTGGCGCCTGGGCGCTGTCCGTTCCCCCCTCCTCCTCCTCCCG CCACTTGGCTCTTTTATTTAGGGCGCAGCGTGTGGCGCCTGCTTTGATTC ATTCGCACATGCCGATTGGGCAACAAATGTAGATGACAACATTACGGCAA CATGGCGGGCATCTATCTACCCGCCGGAATACTTGTTGGCCGACGTCGCA AATCTTTGCAGGGGAGATGTTGAACTCTTCTGATATTTTAGGTGTTTTTC TGCTCGTTTCGCTTGAATATTACTCCGTCACTGTGTGGAATACCGATTGA AACCCACATCGAGCCCTTTTGCTTTCTAGTGTGGGTTATGTTCCATCTTC GATTCATTGTTTTTTTTGAAAAGGTGACGTGCAGTCGCCCTCCCTACGTA TTACATATACACCCAAGCGAGAGAGAAACGCCTCTCAAAAGCCTGTTGTT GACCGCTCTCAGTTTTTAGCGGACCACCACTGTGTGTGTGTGTGTGTGTC CTTCCCATTTATTTTGGCGACAGTCCCCCCAAGTGGAGACGTGTACTACA CCTTGCGGTGTACTTAAAAGGTACTACGCTTTGCAGTGCATTTGTCTGTA CAACTAGAACCAACCGGGGTCACACAGGAGGAGGTGGACACTGGGGCTTT TTCTTCTTTTTTATTTTCTTTTTTTACCACTACTCTCGGTTTTTCTCTGC CTGCCGGTGTGCGATTGCATGCATGCATTTCTCTCTTGACGAAACGCTCC CTATCCCACCGTTTCTGCCCTTTTTGCTTTTGTTCTTGCATCTGTACTGT CTCCCCCCGACCGTTGACCACACGGCGTTAGGCTACGTGCTCCTGCTCTC CAGCAAGAGCAAGCAGTGGGCGGCGGACTTCAAGCTCAACTCCACGGCGA CGGCGGTCACGTTTTCTCCGGACAGCCGCTACGTGCTGGCCTCGAGCGCC GACGCCGACGTGTACAAGTTCGACATCCGCTCGCGCCGCTGCGTCCTGCG GTTCTTCAACGAGGTACGTAGATCTACATACCTTGCCGGTCGTCCCGTTG GTCTAGGTGGTATCCCCGCCACCTTCTAAGAACCAGGCCAGGCCATGGGT TCGAGACCCGGATCCTGTCGTTTTTTTCTTTCTTCTAAATGAATACGTTG CACATCGAAACTGTTTTTTCATGGTGCTCGCGAGCGACTCGTGTGTCCAG CGAGCGCACTATCTCCCCCGGAGTAGATCCTTTTTGTTTTCTTCGTCGTA GATATAAATTAAGTCTTGCATGGAAAGACGCGCCACGTACATATTGTAGC GACGCGACGGCATCTTTTGTTTGTTTGGGTCGCGCGCGCTTGCTTATTGC CTTTAAAATAGTTATCCATCCCTGCCGAAACCATCTCATGGGACTTCGAC TTCACCGTCGGCGAGGGAAAGGGACGGCTGAACCCTTATCGCGACTCAAA TATTAGGCAAGCGCCGCAGACGGGGGAAGTGGGGGCCTTGGGGAAAGGAA CCTTCCTGTGTGACACCACAGTTCAGTACTCTGGGAAGATGTCCTCGTGA CAGGGAGCCCATCGAGCACTGGAAATAAAAAATGCAAAAAAAAGTGAAAA AAAAACGGAACGAGCGCGCAGGCAGTAGGTTGCACCGCTTTGTGATGTAA CGGACCCCCATGCTCGGTAACGACAAACCTTTCTCCGCTCGCGCGCGTGC GCGTTGTTTTTCACGGTGCTCGGGGGCATCTGATTTTTTCAGGGCGGCAC GAGCACGACCAGCATATCCACGACGGGGTCGACGTCGTCGTCGCAAAAGC TCACCGCCATCGGCAGCGATAGCGGAGTGGTGAACGTGTACGACGCGGAC GCTCTCGAGGTGGGGGGCTTCGGCGGTTTTGTGCTCCTGCCCTGGGTGGC GTTTCTGGGGGGTTCGTTACAACTCGCCCAAGCTTTTGTTTGTCCCACGA GGCAGGCGCCTTTGGTGTGCGTGTGCGTGTGCGTGTGCGTGCGCGCCCAC AGCTGTGGATTTCGTTTTCCTTTTTTTTTTCTCGTGAGAGCACGGCGGGT TAAATATATGCACATTGCACACGCGCTTAGTTCCGTTCATAAAAAAAAGA CTTGGTTTTGTTGGGCATTCTGAATCGAGAGACCGGAGTCTTTTCGGAGG GGCCGGTGCGCAAGCACACGGAGGGGCTGGTGAAGCTCGGAAGCTCCGTG TCTTATTTGGCACATACCTACCTACCTGCCGATGTTTGACCATCGCGAAC GGAGCCACTCAAATGATAGGAGCCGAAAACGGCACGGTCTTTCCATCTCG ACCTCGACCGCGTGTTTGTTGTTTGTCCAGGGGCGGAAACGCCAGCACCA ACGAACGGGGAAGTTGGTCCAACCCATGCCTCAAACGCCGGCTGCTGCTT GCTGCCTTGTCTTGGGTACTACACTCAGACACGTAACTCGACCTGTTGTC AGCGGCACTCTGCGTGCCTGCTGTGTACCTCATCTTGTGCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCGCCGCCGCCAGCGGCCCCCGCCGCCCGCACGCCCCGCCGCC NNNNNNNNNNAAGGTGTTTGGGGGGGGTGGTTTGATGGGGTTCCGCTCCC TCCCCCCCCTCTCTCCCCCCCCCCCCCCCCCCCCCCACCCCCACCCCACC CCACCGACCCGGCTGCCCGACCTCGTCGGATTCGAAGACGGGCAAGAGAG TCCTTCGACCGACGCCGCTGAAAGCGGTCATGAGCCTCGCCACACCGGTC ACCACGACCAAGTTCAGCCCCGACGGACAGGTGCGTTCGTTGTGAGCGGG GTTTACGCATGAGTGAGGGCCCTGTTTCTCCTCTCCGTTGACGCATTCAT GTCTTGACCGCGGGTGGGTCGGGGGGTACTGGAAAGCGCGGGGGGGGGGC GTTCATGGGACGAAGCACGCCCCCCCCATCGCTGTGTGCGGCCGCATCGG AAAACACGGGTCTGGGTGTGGTTCGGTAAGAACGGTCCCGATGCTGGCGT CAGGTCACTTCATTGCTCGCGGTGGGTGTCCGTTGTGATTACGCTGGCCA CGGGACATGACATACGTACTTGTACGATTGAACCACCCATCTTGGTGGTA TCTAGACATCTTGCAGCACGATGTCGACTGCTTCCAAAAATCAGAGCAAC AGAATATCAAGCTGCCGCATAAAATCGGGGCTGCCACGACTTACTTCTGA GTTCTCACGCGGTCGTTACCCTCTCTTTTAAAGACACCGTTTCAAGCCAA TCGAGAAGGAATCGAGCGCCTTCTCCGGAGACAGCCTCTCGTCGCATGTG CGGGGCCCCGGCACGCGCTGACGTTACCGGCCGGAAGTCTTCCGAACCCC CAACTGTTGTGCGTGTTTTTGGGCAGTGATCCTGTTGCTCACAACCCGAC GAAGCCTGCTCCCGCATCGGCTGAGTCACTCATTCTGGCTTAGCTTGGGG CAGCAGTTGACTGGTGACATTACTGGTGACATTGGGTATGTAGGGCGTAC CCCCCAGCCCCCTATTTTCGTGAAGCAATAACGACCCAAAGAGCACCTAC CGTATACGACACAAGATAACACACCCCCTGGACGGATTTTCAAAGCTTGG TTACTCTGCAACGAATATGATTTTAATGCAAACCGACACGTTTTCGGACA GCTCTTGATGAGATATTTCCAACGCCGCCCTTTTCGGGGCTGATGCTTTT CTCGCTGTGAAGTACTTGAGCTTTGAAAATCGGCCTTGGGGGTGTGTTAT CTTGTGTCGTATACGGTAGCCTTCTTTTGCACTTTCGTCGAATGCGTACA GAGTAGGGCTGCAATCATCGGGCTGCCTGGCCTCTCTAGGTGTGTTGTTG GAAGCGTTCATTTATTTTTTGTTGGGGAGGGGGTGCCCTGTTTCGTTTCA CTCTGCTGAGCCCCTTGCCGTCCTTCATTTGCCTCGGCGCTGATGAACTT GTCCCATCGAACAACACACCCCATGCCCCACACACGAAATACCCTGAACA AAATGAATGCTTTTAACCTTCAATTAATGTATACAAACGTCAGCAGCAGT CTATGTACGTAATTTTGGGCGTTCTTCGGTTTTTGACCTCGGTGGCTGAG CCACCCACGACTACTACTCTGTCAAGCGAACCTTTTCCCACTTTGTTCGC TTAGTTTCATAGGTCGATCCTCCGTCGTACATAAATAGGTATGTATGATC CCCGGCTGGATTTAATCGCCACGCCTGACCTCGGGCCTAACCCTAACAAT CCCAACCCTAACCCCATGCTCGGCTCTGCCCAGATGCTAGCGATCGCTTC GAACCAAAAGCGAGACGCCCTTAAGGTTATCCACTCCGCGTCGTGCACGC CCTTCACCAACTGGCCGACGGAGCGGACCCCCGTCCGGTACCCGTTCGCG CTGGACTTCTCCCCCGGGGGCGGGTTTCTCGCGGTCGGAAACGACCGGGG TTGCGTGCTGCTCTACCGCATGCGGCACTACCCCCAGGCGTGATCGCTCG TCGCCTCTGGCTTGGGGACTGGGGTGGCCGCTATGTACTTGGTTTCGTGG GTCGGACGGGCCACGTATATAGCGCTTGCGTTACCGCATACAACACAAGA TAACACACCCCCTGGGCCGATTTTCAAGACTCGGTTACTCCGCAACGGGT ATGATTGTAATGCCAAAAGACACGTTTTCGGACAGCTCTTGACGAGGGCT TTCTAACGCCGCCCTTTTCGGGGCTGGTACTCTTCTCGTGGTGGAGTACT TGAGCTTTGAAAATCGGTGTCCAGGGGGTGTCTTATCTTGTGTCGTATGC TGTATGTTTAGTGCTTGCTTTATGTATCACTGTGCTCGCATCGGTATGCA CGACTGCCGTGCTCGTTTTGTCCCTGGATGATGGGTTGGATTTACCTCTG TGGATGATACACGTTGTATTCGGCGACCAATCGCAGATATGTTCTCAAGC TCTAAATACGTGTGTTGTTGTGCTTCTGGGGACGATATCATGTTGCTGGC TAGATACAATAATACCCTAGCTTTGGAGGGGACTGCGTTCTTTGTCTTCG TTTGGAGATTGGTCGCGAACGGGATGTTTGTGGCATCCAAAGTGGGGTCG GGTTTTTGGTCACGTGAGCAGACCAAAATGGGTTAATAGCGCAACCCGCA CATGCGCCTGTACCTCCAAAACCTGATTTTGGCACGACACGAAGAGACTC TGATGCCCATACGGCACAATCAACAGCCCTGTCACACGTGCTTTCTTTGG CGCCTTCGGTGTGCGGCACGCCCGGAAATGGGTTTCAAGGCAACCGACCT GCTTGGCGGGCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2121:503..8464+

>mRNA_L-elsbetiae_contig2121.6471.1 ID=mRNA_L-elsbetiae_contig2121.6471.1|Name=mRNA_L-elsbetiae_contig2121.6471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1410bp|location=Sequence derived from alignment at L-elsbetiae_contig2121:503..8464+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGGTTCCCAGGGTTTTCTCGTCGGGGAGGGCGGAGAAGCACGTGGA
GACCTTCGCGGCGTCGCCGGACGGGCAGTGGCTGGCGTTCATCGGGAGCG
GAGATGAAGGTTCCCAGGGTTTTCTCGTCGGGGAGGGCGGAGAAGCACGT
GGAGACCTTCGCGGCGTCGCCGGACGGGCAGTGGCTGGCGTTCATCGGGA
GCGGAGGCTACGTGCTCCTGCTCTCCAGCAAGAGCAAGCAGTGGGCGGCG
GACTTCAAGCTCAACTCCACGGCGACGGCGGTCACGTTTTCTCCGGACAG
CCGCTACGTGCTGGCCTCGAGCGCCGACGCCGACGTGTACAAGTTCGACA
TCCGCTCGCGCCGCTGCGTCCTGCGGTTCTTCAACGAGGCTACGTGCTCC
TGCTCTCCAGCAAGAGCAAGCAGTGGGCGGCGGACTTCAAGCTCAACTCC
ACGGCGACGGCGGTCACGTTTTCTCCGGACAGCCGCTACGTGCTGGCCTC
GAGCGCCGACGCCGACGTGTACAAGTTCGACATCCGCTCGCGCCGCTGCG
TCCTGCGGTTCTTCAACGAGGGCGGCACGAGCACGACCAGCATATCCACG
ACGGGGTCGACGTCGTCGTCGCAAAAGCTCACCGCCATCGGCAGCGATAG
CGGAGTGGTGAACGTGTACGACGCGGACGCTCTCGAGGGCGGCACGAGCA
CGACCAGCATATCCACGACGGGGTCGACGTCGTCGTCGCAAAAGCTCACC
GCCATCGGCAGCGATAGCGGAGTGGTGAACGTGTACGACGCGGACGCTCT
CGAGACGGGCAAGAGAGTCCTTCGACCGACGCCGCTGAAAGCGGTCATGA
GCCTCGCCACACCGGTCACCACGACCAAGTTCAGCCCCGACGGACAGACG
GGCAAGAGAGTCCTTCGACCGACGCCGCTGAAAGCGGTCATGAGCCTCGC
CACACCGGTCACCACGACCAAGTTCAGCCCCGACGGACAGATGCTAGCGA
TCGCTTCGAACCAAAAGCGAGACGCCCTTAAGGTTATCCACTCCGCGTCG
TGCACGCCCTTCACCAACTGGCCGACGGAGCGGACCCCCGTCCGGTACCC
GTTCGCGCTGGACTTCTCCCCCGGGGGCGGGTTTCTCGCGGTCGGAAACG
ACCGGGGTTGCGTGCTGCTCTACCGCATGCGGCACTACCCCCAGGCGTGA
ATGCTAGCGATCGCTTCGAACCAAAAGCGAGACGCCCTTAAGGTTATCCA
CTCCGCGTCGTGCACGCCCTTCACCAACTGGCCGACGGAGCGGACCCCCG
TCCGGTACCCGTTCGCGCTGGACTTCTCCCCCGGGGGCGGGTTTCTCGCG
GTCGGAAACGACCGGGGTTGCGTGCTGCTCTACCGCATGCGGCACTACCC
CCAGGCGTGA
back to top