mRNA_L-elsbetiae_contig2116.6448.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Match: D7FNB7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB7_ECTSI) HSP 1 Score: 200 bits (508), Expect = 7.110e-59 Identity = 122/221 (55.20%), Postives = 142/221 (64.25%), Query Frame = 1 Query: 193 MGLRRSILALAMARAMSYARHAIATVTWPARCRRV-DGG------VPRSPPPSAFLSLSQSTGHSRHRGSLGSSCPKGRRRQDQEQVRFVGGLFISRTAHGRCAFESIRTARQGGAYA-------------SRGVVTMAQPREKLPQRSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPSCGQLFARDTMVHGKPAFKMIGGKVYQKK 795 MGLRRS L LAMA +S AR AT+ W + R++ D G S PP A S S S S R S + G +++ + G S GR +F S+ T + G + +G+VTMAQPR+KLP+RSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECP+CGQLFARDTMVHG+PAFKMIGGKVYQKK Sbjct: 3 MGLRRSFLVLAMAWTLSLARLTNATIAWTLKPRQLLDYGNMLGALQQASRPPLAKPSSSPSMNRSPSRSS---TSLHGTAADVFDRMGWSGSKGRSTLFVGRMSFTSLGTRERRGVRSIAERIVVVRRSVDRQGLVTMAQPRKKLPERSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPNCGQLFARDTMVHGRPAFKMIGGKVYQKK 220
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Match: A0A7Y0LE18_9GAMM (Uncharacterized protein n=1 Tax=Thalassotalea algicola TaxID=2716224 RepID=A0A7Y0LE18_9GAMM) HSP 1 Score: 129 bits (325), Expect = 1.380e-33 Identity = 55/83 (66.27%), Postives = 72/83 (86.75%), Query Frame = 1 Query: 544 MAQPREKLPQRSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPSCGQLFARDTMVHGKPAFKMIGGKVYQK 792 MA+PR+KLP++SVD++C KC +QL++YKKGGKG+LVKC+KERI +DFT+ CP+C Q+FARDT+V G PAFKMIGGKV+ K Sbjct: 1 MAKPRKKLPEKSVDIYCSKCNSQLFQYKKGGKGALVKCFKERITKDFTEALCTCPNCQQIFARDTLVRGTPAFKMIGGKVWFK 83
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Match: A0A0H0YN86_VIBAL (Uncharacterized protein n=32 Tax=Vibrionaceae TaxID=641 RepID=A0A0H0YN86_VIBAL) HSP 1 Score: 126 bits (317), Expect = 2.040e-32 Identity = 55/83 (66.27%), Postives = 69/83 (83.13%), Query Frame = 1 Query: 544 MAQPREKLPQRSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPSCGQLFARDTMVHGKPAFKMIGGKVYQK 792 MA+P +K P ++VD+FC KC+TQL+KY+KGGKG+LVKC+KERIV+DFT CP+CGQ FARDT+V G PA+KMIGGKV K Sbjct: 1 MAKPNKKQPTKTVDIFCSKCKTQLFKYRKGGKGALVKCFKERIVDDFTQTPCICPACGQEFARDTLVRGTPAYKMIGGKVTMK 83
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Match: A0A128EWW1_9GAMM (Uncharacterized protein n=3 Tax=Grimontia TaxID=246861 RepID=A0A128EWW1_9GAMM) HSP 1 Score: 126 bits (317), Expect = 2.040e-32 Identity = 55/83 (66.27%), Postives = 69/83 (83.13%), Query Frame = 1 Query: 544 MAQPREKLPQRSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPSCGQLFARDTMVHGKPAFKMIGGKVYQK 792 MA+P +KLP+RSVD+ C KC+ L+KYKKGGKGSLVKC+KERIV D+T+ ECPSCG +FAR+T+V G PA+K+IGGKV K Sbjct: 1 MAKPNKKLPERSVDIICTKCKAMLFKYKKGGKGSLVKCFKERIVIDYTETPCECPSCGNVFARETLVRGTPAYKIIGGKVAMK 83
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Match: A0A072L8R7_VIBPH (Uncharacterized protein n=48 Tax=Vibrio parahaemolyticus TaxID=670 RepID=A0A072L8R7_VIBPH) HSP 1 Score: 125 bits (315), Expect = 4.000e-32 Identity = 55/83 (66.27%), Postives = 68/83 (81.93%), Query Frame = 1 Query: 544 MAQPREKLPQRSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPSCGQLFARDTMVHGKPAFKMIGGKVYQK 792 MA+P +K P ++V+++C KC+ QLYKY+KGGKG+LVKC+KERIVED+T CPSCGQ FARDT+V G PAFKMIGGKV K Sbjct: 1 MAKPNKKQPSKTVEIYCAKCKAQLYKYRKGGKGALVKCFKERIVEDYTQTPCFCPSCGQEFARDTLVRGTPAFKMIGGKVTMK 83
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Match: R1IM57_9GAMM (Zn-ribbon motif protein n=3 Tax=Grimontia TaxID=246861 RepID=R1IM57_9GAMM) HSP 1 Score: 125 bits (315), Expect = 4.000e-32 Identity = 54/83 (65.06%), Postives = 68/83 (81.93%), Query Frame = 1 Query: 544 MAQPREKLPQRSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPSCGQLFARDTMVHGKPAFKMIGGKVYQK 792 MA+P +KLP+RSVD+ C KC+ L+KYKKGGKGSLVKC+KERIV D+T+ ECPSCG +FAR+T+V G PA+K+IGGK K Sbjct: 1 MAKPNKKLPERSVDIICAKCKAMLFKYKKGGKGSLVKCFKERIVTDYTETPCECPSCGNVFARETLVRGTPAYKIIGGKAAMK 83
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Match: A0A0M0I516_9VIBR (Uncharacterized protein n=4 Tax=Vibrionaceae TaxID=641 RepID=A0A0M0I516_9VIBR) HSP 1 Score: 125 bits (315), Expect = 4.000e-32 Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = 1 Query: 544 MAQPREKLPQRSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPSCGQLFARDTMVHGKPAFKMIGGKVYQK 792 MA+P +K P ++VD++C KC++QL+KY+KGGKG+LVKC+KERIVEDFT +CPSCGQ FARDT+V G PA+K+IGGKV K Sbjct: 1 MAKPNKKQPTKTVDIYCAKCKSQLFKYRKGGKGALVKCFKERIVEDFTTESCKCPSCGQEFARDTLVRGTPAYKIIGGKVTMK 83
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Match: A0A0F5VFL2_9GAMM (Zn-ribbon motif protein n=1 Tax=Photobacterium halotolerans TaxID=265726 RepID=A0A0F5VFL2_9GAMM) HSP 1 Score: 125 bits (314), Expect = 5.590e-32 Identity = 52/83 (62.65%), Postives = 70/83 (84.34%), Query Frame = 1 Query: 544 MAQPREKLPQRSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPSCGQLFARDTMVHGKPAFKMIGGKVYQK 792 MA+P +K P +V++FC +CRT+L+KY+KGGKG+LVKC+KERIV+DFT +CP+C Q FAR+T++HG PAFKMIGGK +QK Sbjct: 1 MAKPNKKGPDTTVEIFCSQCRTRLFKYRKGGKGALVKCFKERIVKDFTRSACQCPNCEQTFARETLIHGTPAFKMIGGKAFQK 83
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Match: A9DD79_9GAMM (Uncharacterized protein n=2 Tax=Shewanella benthica TaxID=43661 RepID=A9DD79_9GAMM) HSP 1 Score: 125 bits (313), Expect = 7.830e-32 Identity = 56/80 (70.00%), Postives = 67/80 (83.75%), Query Frame = 1 Query: 544 MAQPREKLPQRSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPSCGQLFARDTMVHGKPAFKMIGGKV 783 MA+P +K P R+VD+FC KC+TQL+KY+KGGKG+LVKC+KERIV DFT CP+CGQ FARDT+V G PAFKMIGGKV Sbjct: 1 MAKPNKKGPTRTVDIFCAKCKTQLFKYRKGGKGALVKCFKERIVADFTHTPCICPNCGQEFARDTLVRGTPAFKMIGGKV 80
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Match: A0A1T4UR36_9GAMM (Uncharacterized protein n=1 Tax=Enterovibrio nigricans DSM 22720 TaxID=1121868 RepID=A0A1T4UR36_9GAMM) HSP 1 Score: 125 bits (313), Expect = 7.830e-32 Identity = 55/83 (66.27%), Postives = 68/83 (81.93%), Query Frame = 1 Query: 544 MAQPREKLPQRSVDVFCQKCRTQLYKYKKGGKGSLVKCYKERIVEDFTDGKLECPSCGQLFARDTMVHGKPAFKMIGGKVYQK 792 MA+P +KLP+RSVD+ C KC+T L+KYKKGGKG+LVKC+KERIV+DFT ECPSCG +FARDT+V G PAFK+IG K + Sbjct: 1 MAKPNKKLPERSVDIQCGKCKTLLFKYKKGGKGALVKCFKERIVDDFTTQPCECPSCGSVFARDTLVRGAPAFKIIGNKAVMR 83 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2116.6448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2116.6448.1 >prot_L-elsbetiae_contig2116.6448.1 ID=prot_L-elsbetiae_contig2116.6448.1|Name=mRNA_L-elsbetiae_contig2116.6448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp MGLRRSILALAMARAMSYARHAIATVTWPARCRRVDGGVPRSPPPSAFLSback to top mRNA from alignment at L-elsbetiae_contig2116:14508..19006+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2116.6448.1 ID=mRNA_L-elsbetiae_contig2116.6448.1|Name=mRNA_L-elsbetiae_contig2116.6448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4499bp|location=Sequence derived from alignment at L-elsbetiae_contig2116:14508..19006+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2116:14508..19006+ >mRNA_L-elsbetiae_contig2116.6448.1 ID=mRNA_L-elsbetiae_contig2116.6448.1|Name=mRNA_L-elsbetiae_contig2116.6448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig2116:14508..19006+ (Laminarionema elsbetiae ELsaHSoW15)back to top |