mRNA_L-elsbetiae_contig2114.6441.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Match: A0A6H5JSB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB9_9PHAE) HSP 1 Score: 237 bits (604), Expect = 5.910e-78 Identity = 116/144 (80.56%), Postives = 124/144 (86.11%), Query Frame = 1 Query: 58 MAPKKAKGKKKSTGDDXXXXXXXXXXEGSLPAEPPLVMPSDEEWVTLDLKLLNWKFLDFKHRARTTTHIFTIKNLLLEHHGRVDDLILCKGSFTEANELQDEMKTLKGYGIKGAPRGIDPPVTVPLFYDFKPVAYDEPLLLVWH 489 M PKKAK KKKSTG D +G LPAEP L MPSDEEWVTLDLKLLNWKFLDFKHR RTTTHIFTIKNLLLEHHGRV DLI+CK +FTEANEL+DEM+TLKGYGIKGAPRG+DPPV VPLFYDFKP+AYDEPLLLVW+ Sbjct: 1 MGPKKAKAKKKSTGGDKADEKVDNV-DGPLPAEPALAMPSDEEWVTLDLKLLNWKFLDFKHRVRTTTHIFTIKNLLLEHHGRVADLIVCKEAFTEANELKDEMQTLKGYGIKGAPRGVDPPVMVPLFYDFKPIAYDEPLLLVWN 143
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Match: D8LEG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG3_ECTSI) HSP 1 Score: 235 bits (600), Expect = 9.450e-77 Identity = 116/142 (81.69%), Postives = 123/142 (86.62%), Query Frame = 1 Query: 58 MAPKKAKGKKKSTGDDXXXXXXXXXXEGSLPAEPPLVMPSDEEWVTLDLKLLNWKFLDFKHRARTTTHIFTIKNLLLEHHGRVDDLILCKGSFTEANELQDEMKTLKGYGIKGAPRGIDPPVTVPLFYDFKPVAYDEPLLLV 483 M PKKAK KKKSTG D +G LPAEP L MPSDEEWVTLDLKLLNWKFLDFKHR RTTTHIFTIKNLLLEHHGRV DLI+CKG+FTEANEL+DEM+TLKGYGIKGAPRG+DPPV VPLFYDFKP+AYDEPLLLV Sbjct: 1 MGPKKAKAKKKSTGGDKADEKVDNV-DGPLPAEPALAMPSDEEWVTLDLKLLNWKFLDFKHRVRTTTHIFTIKNLLLEHHGRVADLIVCKGAFTEANELKDEMQTLKGYGIKGAPRGVDPPVMVPLFYDFKPIAYDEPLLLV 141
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Match: A0A6V1N8Z5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N8Z5_HETAK) HSP 1 Score: 143 bits (360), Expect = 8.560e-41 Identity = 62/109 (56.88%), Postives = 84/109 (77.06%), Query Frame = 1 Query: 163 LVMPSDEEWVTLDLKLLNWKFLDFKHRARTTTHIFTIKNLLLEHHGRVDDLILCKGSFTEANELQDEMKTLKGYGIKGAPRGIDPPVTVPLFYDFKPVAYDEPLLLVWH 489 ++ P EEWVTL L LLNW +++ ++R +T+THIF IKN L E HGR+++LI+CK SF+EANE+ DEMKTL+ YG+KGAP +PP P+FYDFK + +PLLLVW+ Sbjct: 39 VLAPDLEEWVTLQLNLLNWSYMNTEYRVKTSTHIFRIKNYLKERHGRIEELIICKDSFSEANEMADEMKTLEDYGVKGAPEDHEPPARCPIFYDFKQSDHHDPLLLVWN 147
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Match: A0A7S2V1Q2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Q2_9STRA) HSP 1 Score: 122 bits (306), Expect = 5.130e-33 Identity = 63/121 (52.07%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 58 MAPKKAKGKK-KSTGDDXXXXXXXXXXEGSLPAEPPLVM-PSDEEWVTLDLKLLNWKFLDFKHRARTTTHIFTIKNLLLEHHGRVDDLILCKGSFTEANELQDEMKTLKGYGIKGAPRGID 414 MAPKK KK KS G + +L PLVM P ++WVTLD+ L+NWK+++F+HR +TTTHIFT+KN+L E HGRV DL+LCK SF E NE+ DEM+TL YG++GA R ++ Sbjct: 1 MAPKKKTAKKRKSVG----KGKEEEEMKQALDEFQPLVMLPDTDQWVTLDMNLMNWKYMNFQHRVKTTTHIFTLKNMLREKHGRVSDLVLCKDSFREENEMNDEMQTLADYGVEGAGRTVE 117
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Match: A0A836CBV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBV7_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.120e-32 Identity = 56/105 (53.33%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 163 LVMPSDEEWVTLDLKLLNWKFLDFKHRARTTTHIFTIKNLLLEHHGRVDDLILCKGSFTEANELQDEMKTLKGYGIKGAPRGIDPPVTVPLFYDFKPVAYDEPLL 477 +V+ DEEWVTLD+KLLNW++++ K RT+TH+FTI+ LL E HG V DL++C +FT+ANE+ DEMKTL Y IKG R + P+++ +FYDF+P D LL Sbjct: 1 MVVRGDEEWVTLDMKLLNWRYMNHKQAVRTSTHVFTIRRLLAERHGNVKDLVICHTAFTQANEMADEMKTLAEYSIKGK-RKDEEPLSIIIFYDFRPNNTDALLL 104
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Match: A0A2P4Y6J3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y6J3_9STRA) HSP 1 Score: 117 bits (293), Expect = 4.910e-31 Identity = 56/109 (51.38%), Postives = 78/109 (71.56%), Query Frame = 1 Query: 157 PPLVMPSDE-EWVTLDLKLLNWKFLDFKHRARTTTHIFTIKNLLLEHHGRVDDLILCKGSFTEANELQDEMKTLKGYGIKGAPRGIDPPVTVPLFYDFKPVAYDEPLLL 480 PP+++ +D +VTLD++LLNW +L+FK R +TTT +F IK + + HG V DL +CKG F+EANEL+ +M TL YGI+GAP G +P + + YDFKP +D PLLL Sbjct: 6 PPIIIEADPVHYVTLDMRLLNWSYLNFKFRTKTTTRLFAIKQQIQKQHGPVTDLKICKGHFSEANELKQDMMTLAEYGIEGAPEG-EPDMVYLIHYDFKPEQHDNPLLL 113
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Match: G5A4M1_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5A4M1_PHYSP) HSP 1 Score: 114 bits (286), Expect = 1.260e-29 Identity = 54/109 (49.54%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 157 PPLVMPSDE-EWVTLDLKLLNWKFLDFKHRARTTTHIFTIKNLLLEHHGRVDDLILCKGSFTEANELQDEMKTLKGYGIKGAPRGIDPPVTVPLFYDFKPVAYDEPLLL 480 PP+++ +D +VTLD++LLNW +L+FK R +TTT +F IK + + HG + DL +CKG F+EANEL+ +M TL +GI+GAP G +P + YDFKP +D PLLL Sbjct: 34 PPIIIEADPIHYVTLDMRLLNWSYLNFKFRTKTTTRLFAIKQQIQKQHGPITDLKICKGHFSEANELRHDMMTLAEFGIEGAPEG-EPEAVCLIHYDFKPEQHDNPLLL 141
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Match: A0A833SYX6_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SYX6_PHYIN) HSP 1 Score: 114 bits (285), Expect = 1.900e-29 Identity = 62/144 (43.06%), Postives = 89/144 (61.81%), Query Frame = 1 Query: 58 MAPKK-AKGKK-KSTGDDXXXXXXXXXXEGSLPAEPPLVMPSDE-EWVTLDLKLLNWKFLDFKHRARTTTHIFTIKNLLLEHHGRVDDLILCKGSFTEANELQDEMKTLKGYGIKGAPRGIDPPVTVPLFYDFKPVAYDEPLLL 480 M PKK KGKK K++ + + PP+ + +D +VTLD++LLNW +L+FK R +T+T +F +K + + HG + +L +CKG F EANEL+ +M TL YG++GAP G DP V + YDFKP +D PLLL Sbjct: 1 MPPKKKTKGKKNKASAGGADAADNAVEATSIIDSAPPIFIQADPVHYVTLDMRLLNWSYLNFKFRTKTSTRLFAVKQQIQKQHGPITELKICKGHFAEANELRHDMMTLAEYGVEGAPEG-DPEVVCLIHYDFKPEQHDNPLLL 143
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Match: A0A2P4XK89_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XK89_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.220e-29 Identity = 68/161 (42.24%), Postives = 90/161 (55.90%), Query Frame = 1 Query: 58 MAPKK-AKGKKKSTGDDXXXXXXXXXXEGSL-PAEPPLVMPSDE-EWVTLDLKLLNWKFLDFKHRARTTTHIFTIKNLLLEHHGRVDDLILCKGSFTEANELQDEMKTLKGYGIKGAPRGIDPPVTVP-----------------LFYDFKPVAYDEPLLL 480 M PKK AKGKK G S+ PP+++ +D +VTLD++LLNW +L+FK R +TTT +F IK + + HG V DL +CKG F+EANEL+ +M TL YGI+GAP G V+ P + YDFKP +D PLLL Sbjct: 1 MPPKKKAKGKKTKAGSGGGDAGEGNIESSSMFDTTPPIIIEADPVHYVTLDMRLLNWSYLNFKFRTKTTTRLFAIKQQIQKQHGPVTDLKICKGHFSEANELKQDMMTLAEYGIEGAPEGEPDMVSSPNSNRQYTKLTIYCMVYLIHYDFKPEQHDNPLLL 161
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Match: A0A2D4BP18_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP18_PYTIN) HSP 1 Score: 114 bits (284), Expect = 2.330e-29 Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 1 Query: 142 SLPAEPPLVMPSD-EEWVTLDLKLLNWKFLDFKHRARTTTHIFTIKNLLLEHHGRVDDLILCKGSFTEANELQDEMKTLKGYGIKGAPRGIDPPVTVPLFYDFKPVAYDEPLLL 480 +L PPLV+P D +VTLD++LLNW +L+F+ R +TTT +F IK + + HG + L +CKG F EANE+Q +M TL YGI GAP +P V + YDFKP +D PLLL Sbjct: 26 ALDTAPPLVIPPDVPHFVTLDMRLLNWSYLNFRIRTKTTTRLFAIKQQIQKRHGPIMHLKICKGHFAEANEMQQDMATLIDYGIDGAPEN-EPEVICVIHYDFKPQQHDNPLLL 138 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2114.6441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2114.6441.1 >prot_L-elsbetiae_contig2114.6441.1 ID=prot_L-elsbetiae_contig2114.6441.1|Name=mRNA_L-elsbetiae_contig2114.6441.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp PVDLYTYNAETEGCKHGDVMAPKKAKGKKKSTGDDKGDEKIDTKVEGSLPback to top mRNA from alignment at L-elsbetiae_contig2114:11001..14038+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2114.6441.1 ID=mRNA_L-elsbetiae_contig2114.6441.1|Name=mRNA_L-elsbetiae_contig2114.6441.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3038bp|location=Sequence derived from alignment at L-elsbetiae_contig2114:11001..14038+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2114:11001..14038+ >mRNA_L-elsbetiae_contig2114.6441.1 ID=mRNA_L-elsbetiae_contig2114.6441.1|Name=mRNA_L-elsbetiae_contig2114.6441.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=978bp|location=Sequence derived from alignment at L-elsbetiae_contig2114:11001..14038+ (Laminarionema elsbetiae ELsaHSoW15)back to top |