mRNA_L-elsbetiae_contig2110.6419.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Match: D7FJA1_ECTSI (Putative Leucine Rich Repeat Protein Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA1_ECTSI) HSP 1 Score: 551 bits (1421), Expect = 2.810e-187 Identity = 397/497 (79.88%), Postives = 418/497 (84.10%), Query Frame = 1 Query: 796 MCHFPGAILRCGLFFQRVTVLSMPRQGITDGDIPASVVRLAGALRKVDLSGNRLTAVPSGXXXXXXXXXXXXXXXXXIAELPPEIAQLSGLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELCRIAVNPGLAVVPEGLKFAERLAWVSLAGSAWCARATEKRRRPSFPVISREEVVLGDRLGSGASGDVFAGVYRGQDVAVKVFKSDIGPDGNARDELDVACAVDHPNLTKSLGVVRASSAKSAATGDXXXXXXXXXXXXXXX-----------------------VENLRWLVMERVIGQPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKSICHGDLYAHNVLVDGETGAAVLCDFGASFFYPSDR-HDSSVLEGTEVRAFGLMSRDMACRSAGCEWILQDLVPSCLQADASHRPSFHE 2214 MC PG +LR GL FQRVT LSMP QGI DGD+PASVVRLAG LRKVDLSGNRLTAVP G IAE+PPEIA+L GLL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LCR+AVNPGL VVPEGL +AE+LAWVSLAGSAWCARA+EKRRR SFP I REEVVLG+RLGSGASG+VFAGVYRG+DVAVKVFK+DIGPDGNARDELDVA VDHPNLTKSLGVV ASS K + XXXXXXX +ENLRWLVMERV+G+PLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEK+ICHGDLYAHNVLVDGETGAAVLCDFGASFFYP+DR HD S+LEGTEVRAFGLMS+DMACRSAGCEWILQDLVPSCLQ+DASHRPSFHE Sbjct: 1 MCLLPGIVLRSGLVFQRVTALSMPGQGIGDGDVPASVVRLAGVLRKVDLSGNRLTAVPPGLLGLGAGLEDLNLGNNDIAEMPPEIAKLGGLLFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCRLAVNPGLTVVPEGLTYAEKLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGVYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVHASSTKPSGRSSSGSESEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKAICHGDLYAHNVLVDGETGAAVLCDFGASFFYPTDRQHDCSMLEGTEVRAFGLMSKDMACRSAGCEWILQDLVPSCLQSDASHRPSFHE 497
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Match: A0A6H5L0B3_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B3_9PHAE) HSP 1 Score: 404 bits (1039), Expect = 2.460e-130 Identity = 225/290 (77.59%), Postives = 242/290 (83.45%), Query Frame = 1 Query: 1390 EGLKFAERLAWVSLAGSAWCARATEKRRRPSFPVISREEVVLGDRLGSGASGDVFAGVYRGQDVAVKVFKSDIGPDGNARDELDVACAVDHPNLTKSLGVVRASSAKSAATG--------------DXXXXXXXXXXXXXXXVENLRWLVMERVIGQPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKSICHGDLYAHNVLVDGETGAAVLCDFGASFFYPSDR-HDSSVLEGTEVRAFGLMSRDMACRSAGCEWILQDLVPSCLQADASHRPSFHE 2214 +G+K +A V LA + W + SFP I REEVVLG+RLGSGASG+VFAGVYRG+DVAVKVFK+DIGPDGNARDELDVA VDHPNLTKSLGVV ASS K + XXXXXXXXXXXX +ENLRWLVMERV+G+PLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEK+ICHGDLYAHNVLVDGETGAAVLCDFGASFFYP+DR HD S+LEGTEVRAFGLMSRDMACRSAGCEWILQDLVPSCLQ+DASHRPSFHE Sbjct: 11 KGVKGPVVVAVVVLAVAVW-------KGVTSFPDIPREEVVLGERLGSGASGEVFAGVYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVHASSIKPSGGSISRSESEVAAXXXXXXXXXXXXXXXXXGDEIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKAICHGDLYAHNVLVDGETGAAVLCDFGASFFYPTDRQHDCSMLEGTEVRAFGLMSRDMACRSAGCEWILQDLVPSCLQSDASHRPSFHE 293
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Match: A0A5J4XR07_9CHLO (Kinase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XR07_9CHLO) HSP 1 Score: 197 bits (501), Expect = 7.120e-52 Identity = 117/276 (42.39%), Postives = 158/276 (57.25%), Query Frame = 1 Query: 1414 LAWVSLAGSAWCARATEKRRRPSFPVISREEVVLGDRLGSGASGDVFAGVYRGQDVAVKVFKSDIGPDGNARDELDVACAVDHPNLTKSLGVVRASSAKSAATGDXXXXXXXXXXXXXXXVENLRWLVMERVIGQPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKSICHGDLYAHNVLVDGETGAAVLCDFGASFFYPSDRHDSSVLEGTEVRAFGLMSRDMACR----SAGCEW----ILQDLVPSCL--QADASHRPSFH 2211 LAW+SLAG+ C A R P ++ ++ + LG GASGDVFA ++ +DVA+K+FK++ PDG+ARDE+ V C VDHPNL K +G++ A LV+ER+ G PLA KP+F S+LRCRW G+ F V V VA A+SYLH+ +ICHGD+Y HNVL D E G +VLCD+GASFFY + S E EVRA+GL+ D+ R S C+ ILQ++V C+ A + RP+F+ Sbjct: 231 LAWLSLAGNPACQPAPPIR--PDILPLTLSQLDIATALGDGASGDVFAAKFQERDVAIKIFKAESSPDGHARDEIAVTCFVDHPNLIKVIGIIDHPHA----------------------------LVLERIWGVPLALKPNFESLLRCRWTPGQTFTAAFVWNVAKSVANALSYLHKHNICHGDVYGHNVLAD-EEGNSVLCDYGASFFYQAG---SVPYEAQEVRAYGLLLHDLVSRLKQASEQCDKDAARILQEIVQQCIGNTASTTQRPTFY 472
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Match: A0A8J9S5V3_9CHLO (Probable leucine-rich repeat-containing protein 7 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S5V3_9CHLO) HSP 1 Score: 184 bits (467), Expect = 4.050e-47 Identity = 114/271 (42.07%), Postives = 143/271 (52.77%), Query Frame = 1 Query: 1414 LAWVSLAGSAWCARATEKRRRPSFPVISREEVVLGDRLGSGASGDVFAGVYRGQDVAVKVFKSDIGPDGNARDELDVACAVDHPNLTKSLGVVRASSAKSAATGDXXXXXXXXXXXXXXXVENLRWLVMERVIGQPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKSICHGDLYAHNVLVDGETGAAVLCDFGASFFYPSDRHDSSVLEGTEVRAFGLMSRDMACRSAGCEWI------LQDLVPSCLQADASHRPSF 2208 LAW+SLAG+ C R ++ E + LG LG GASGDVFA G++VAVKVFK ++ PDG A DE+ V C V+HP+LT+ L ++ A LV++RV G+PLA KP+ S+LRCRW F V V L VA A+ YLH ICHGD+YAHN+LVD E G A L D+GASFFY + + E EVRAFGL DM R G + L+D+ L D RPSF Sbjct: 219 LAWMSLAGNPACPPPPV---RGHIADVTIEHLSLGVPLGEGASGDVFAAHMEGEEVAVKVFKGEVSPDGKAADEIAVTCYVNHPHLTRVLATLQQPHA----------------------------LVLKRVAGRPLAAKPNLQSLLRCRWPPDAAFSSAFVARVALCVASALQYLHAHCICHGDVYAHNILVDNE-GHATLLDYGASFFY---KPGTLPYEAQEVRAFGLFLSDMLARVEGADKASSVRAGLEDIAAGALHKDPLGRPSF 454
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Match: A0A2K3DNM2_CHLRE (Protein kinase domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DNM2_CHLRE) HSP 1 Score: 184 bits (468), Expect = 9.720e-47 Identity = 113/267 (42.32%), Postives = 146/267 (54.68%), Query Frame = 1 Query: 1345 ELCRIAVNPGLAVVPEGLKFAE---RLAWVSLAGSAWCARATEKRRRPSFPVISREEVVLGDRLGSGASGDVFAGVYRGQDVAVKVFKSDIGPDGNARDELDVACAVDHPNLTKSLGVVRASSAKSAATGDXXXXXXXXXXXXXXXVENLRWLVMERVIGQPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKSICHGDLYAHNVLVDGETGAAVLCDFGASFFYPSDRHDSSVLEGTEVRAFGLMSRDMACRSA 2136 EL R+AV ++ P+ L+ A RLAW S+AG+ C P PV++ EE+ LG +LG GASGDV+ V+RGQ VAVK F++D+ PDG DE+ +A ++ HP+LT+ L VE LV+ G PLA KP +LRC+WG RF P L + VA A+ Y H ICHGD+YAHNVL+D E G LCDFGASF Y DR E EVRA+GLM +D+A R+A Sbjct: 246 ELLRVAVCDIKSLPPQLLQDAAALPRLAWFSVAGNPVCPGPPAPA--PGLPVVAPEELELGQKLGDGASGDVYRAVWRGQLVAVKYFRADVSPDGRTEDEVALAVSLQHPHLTQVLA----------------------------RVEKPHGLVLRLEAGSPLAAKPTSQHLLRCKWGDDVRFPPRRALGLAAAVADALRYCHAAGICHGDVYAHNVLMD-ENGTVTLCDFGASFSY--DRAAQPFWEAMEVRAYGLMLKDVADRAA 479
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Match: A0A836C659_9CHLO (Protein kinase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C659_9CHLO) HSP 1 Score: 183 bits (464), Expect = 2.300e-46 Identity = 110/277 (39.71%), Postives = 150/277 (54.15%), Query Frame = 1 Query: 1411 RLAWVSLAGSAWCARATEKRRRPSFPVISREEVVLGDRLGSGASGDVFAGVYRGQDVAVKVFKSDIGPDGNARDELDVACAVDHPNLTKSLGVVRASSAKSAATGDXXXXXXXXXXXXXXXVENLRWLVMERVIGQPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKSICHGDLYAHNVLVDGETGAAVLCDFGASFFYPSDRHDSSVLEGTEVRAFGLMSRDMACR-------SAGCEWILQD----LVPSCLQADASHRPSF 2208 RLAW S+AG+ C P P+++REE+ LG +LG GASGDVF V+RG+ VAVK F++D+ PDG DE+ +A A+ HP+LT+ LG VE+ LV+ G+PLA KP + +LRC+W RF LA+ +VA A+ Y H +CHGD+YAHNVL+D E G+ LCDFGAS+ Y DR E EVRA+GL+ RD+ R +AG + D L C++ + RP+F Sbjct: 264 RLAWFSVAGNPACPDPPPPA--PGLPLVAREELELGQKLGDGASGDVFRAVWRGELVAVKFFRADVSPDGRTEDEVALAIALQHPHLTQVLG----------------------------RVEHPSGLVLRLESGKPLAHKPTSAHLLRCKWADETRFPLPRALALAARVADALRYCHAAGVCHGDVYAHNVLMD-EDGSVTLCDFGASYSY--DRTRQPFWEAMEVRAYGLLLRDVVARCDPPASAAAGAAAAVVDGLRALAERCVELAPAQRPTF 507
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Match: I0Z463_COCSC (L domain-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z463_COCSC) HSP 1 Score: 179 bits (454), Expect = 6.840e-46 Identity = 111/270 (41.11%), Postives = 139/270 (51.48%), Query Frame = 1 Query: 1417 AWVSLAGSAWCARATEKRRRPSFPVISREEVVLGDRLGSGASGDVFAGVYRGQDVAVKVFKSDIGPDGNARDELDVACAVDHPNLTKSLGVVRASSAKSAATGDXXXXXXXXXXXXXXXVENLRWLVMERVIGQPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKSICHGDLYAHNVLVDGETGAAVLCDFGASFFYPSDRHDSSVLEGTEVRAFGLMSRDMACR------SAGCEWILQDLVPSCLQADASHRPSF 2208 AW+SLAG+ C + R FP ++ +++ LG LG GASGDV+A +DVAVKVFK ++ PDG A DE+ V C VDHP+LT+ RV GQPLA KP+ S+LRCRW G F P V V L VA A+ YLH ICHGD+YAHN+LV + G A L D+GASFFY + + E EVRAFGL DM R + L+++ LQ D S RPSF Sbjct: 189 AWMSLAGNPICPQTPV---RGQFPAMTIDQLSLGVSLGEGASGDVYAAKLGAEDVAVKVFKGEVSPDGRAADEIAVTCYVDHPHLTR------------------------------------------RVQGQPLAGKPNLQSLLRCRWPPGSAFSPGFVARVALCVASALQYLHAHCICHGDVYAHNILVAAD-GHATLLDYGASFFY---KPGTLPYEAQEVRAFGLFLNDMLARLEAPDKPSAVRSSLEEITADALQRDPSCRPSF 409
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Match: A0A835WDB1_9CHLO (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WDB1_9CHLO) HSP 1 Score: 181 bits (460), Expect = 1.390e-45 Identity = 105/242 (43.39%), Postives = 134/242 (55.37%), Query Frame = 1 Query: 1411 RLAWVSLAGSAWCARATEKRRRPSFPVISREEVVLGDRLGSGASGDVFAGVYRGQDVAVKVFKSDIGPDGNARDELDVACAVDHPNLTKSLGVVRASSAKSAATGDXXXXXXXXXXXXXXXVENLRWLVMERVIGQPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKSICHGDLYAHNVLVDGETGAAVLCDFGASFFYPSDRHDSSVLEGTEVRAFGLMSRDMACRSA 2136 RLAW S+AG+ C P PV+ R+E+ LG +LG GASGDV+ V+RGQ VAVK F++D+ PDG DE+ +A ++ HP+LT+ L VE LV+ G PLA KP +LRC+WG RF P L + VA A+ Y H ICHGD+YAHNVL+D E G LCDFGASF Y DR + E EVRA+GLM +D+A R+A Sbjct: 271 RLAWFSVAGNPVCPDPPAPA--PGLPVVCRDELELGQKLGDGASGDVYRAVWRGQLVAVKFFRADVSPDGRTEDEVALAISLQHPHLTQVLA----------------------------RVEQPHGLVLRLESGSPLALKPTSQHLLRCKWGDDVRFPPRRALGLAAAVADALRYCHAAGICHGDVYAHNVLMD-ENGTVTLCDFGASFSY--DRGEQPFWEAMEVRAYGLMLKDVAERAA 479
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Match: A0A835TFM4_CHLIN (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TFM4_CHLIN) HSP 1 Score: 180 bits (457), Expect = 2.850e-45 Identity = 111/267 (41.57%), Postives = 144/267 (53.93%), Query Frame = 1 Query: 1345 ELCRIAVNPGLAVVPEGLKFAE---RLAWVSLAGSAWCARATEKRRRPSFPVISREEVVLGDRLGSGASGDVFAGVYRGQDVAVKVFKSDIGPDGNARDELDVACAVDHPNLTKSLGVVRASSAKSAATGDXXXXXXXXXXXXXXXVENLRWLVMERVIGQPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKSICHGDLYAHNVLVDGETGAAVLCDFGASFFYPSDRHDSSVLEGTEVRAFGLMSRDMACRSA 2136 EL R+AV ++ P+ L+ A RLAW S+AG+ C P PV++ EE+ LG +LG GASGDVF V+RGQ VAVK F++D+ PDG DE+ +A + HP+LT+ L V LV+ G PLA KP + +LRC+WG RF P L + VA A+ Y H +CHGD+YAHNVL+D E G LCDFGASF Y DR E EVRA+GLM +D+ R+A Sbjct: 245 ELLRVAVCSIQSLPPQLLQDAAAMPRLAWFSVAGNPVCPGPP--CAAPGLPVVAPEELELGQKLGDGASGDVFRAVWRGQLVAVKFFRADVSPDGRTEDEVALAIGLQHPHLTQVLARVLEPHG----------------------------LVLRLETGSPLAHKPTSAHLLRCKWGDDVRFPPRRALGLAAAVADALRYCHAAGVCHGDVYAHNVLMD-ENGTVTLCDFGASFSY--DRAAQPFWEAMEVRAYGLMLKDVVERAA 478
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Match: A0A7J7QFY5_9CHLO (Protein kinase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QFY5_9CHLO) HSP 1 Score: 176 bits (445), Expect = 1.510e-43 Identity = 124/298 (41.61%), Postives = 166/298 (55.70%), Query Frame = 1 Query: 1345 ELCRIAVNPGLAVVPEGLKFAERL---AWVSLAGSAWCARATEKRRRPSFPVISREEVVLGDRLGSGASGDVFAGVYRGQDVAVKVFKSDIGPDGNARDELDVACAVDHPNLTKSLGVVRASSAKSAATGDXXXXXXXXXXXXXXXVENLRWLVMERVIGQPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQVARAMSYLHEKSICHGDLYAHNVLVDGETGAAVLCDFGASFFYPSDRHDSSVLEGTEVRAFGLMSRDMACRSA-------GCEWILQDLVPSCLQADASHRPSF 2208 EL R+AV L P GL A+ L AW S+ + A P + R + +G++LG GASG+VF GVY G+ VAVK+F +D+ PDG+ +E+ + CAV HPNLT+ L +V + + XXXXXXXXXXXXX + LV+E V G+PLA++P +LRC+WG F L++ VA A++YLH I HGD+YAHN++ DG+ V+CDFGASF Y + E EVRAFGL D+ R + G L+ LV CL A RP F Sbjct: 240 ELFRLAVGQ-LRQWPAGLAEADSLPMLAWCSIGRNP--AAVAVPAVAAELPRVDRWALQVGEKLGQGASGEVFLGVYEGRSVAVKIFIADVSPDGSTAEEMAINCAVRHPNLTRVLALV-TDTQQXXXXXXXXXXXXXXXXXXXGDAGAIVGLVLELVHGKPLADRPTSRHLLRCKWGGDVSFSLPAALSICHGVAGALAYLHSLGIAHGDVYAHNIMADGQA-RPVVCDFGASFCYSAAADPGRFFERMEVRAFGLFMGDVVARISEQAGVADGASQQLRHLVQQCLAGSAMQRPLF 532 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2110.6419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2110.6419.1 >prot_L-elsbetiae_contig2110.6419.1 ID=prot_L-elsbetiae_contig2110.6419.1|Name=mRNA_L-elsbetiae_contig2110.6419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=738bp SNRSSQLPLICVMVSLGGRPWGMELKAPVAVAVVLLVVAVWKTSNPKGSSback to top mRNA from alignment at L-elsbetiae_contig2110:13737..21073+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2110.6419.1 ID=mRNA_L-elsbetiae_contig2110.6419.1|Name=mRNA_L-elsbetiae_contig2110.6419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7337bp|location=Sequence derived from alignment at L-elsbetiae_contig2110:13737..21073+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2110:13737..21073+ >mRNA_L-elsbetiae_contig2110.6419.1 ID=mRNA_L-elsbetiae_contig2110.6419.1|Name=mRNA_L-elsbetiae_contig2110.6419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4428bp|location=Sequence derived from alignment at L-elsbetiae_contig2110:13737..21073+ (Laminarionema elsbetiae ELsaHSoW15)back to top |