mRNA_L-elsbetiae_contig211.6412.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig211.6412.1
Unique NamemRNA_L-elsbetiae_contig211.6412.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Match: B5LWG9_9PHYC (Putative PCNA n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG9_9PHYC)

HSP 1 Score: 411 bits (1056), Expect = 1.380e-142
Identity = 205/279 (73.48%), Postives = 246/279 (88.17%), Query Frame = 1
Query:    7 MGHCEEMEDSVANSEISGKQPIEDGRKLLVLMRTSQCLQFKSLFECLKELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVINTVEYFYAHGTVIAGIEIKFLYRMIRSLASGDFMEWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLDLDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFIADGEMASSHITIRPTASGLNWKHSEDADDIQGKFVGRYLEKFGRVGVETNVEIFLKNEFPLILRYELSIGTLRFVIAPVVE 843
            +GH E MED+++      +QP+ + RKL+ LMRTSQC QFKSL ECLKELLT+VN+EFIE KGIRLVSIDPG VAMVHLV+N+VEYFY  GTV AG+ + FLYRMIRSL+SGD+MEW+I+ED+P+ M+I+L N++RRT TV+ +KLLDLDEV+ISIP +EYDR+VS+PSSEL+KHVREMVAVS++VT++GTR+TLEFIA+GEMASSHITI PTASGLNWK SED  DI+GKFV RYLEKFGRVGVE NVE+FLK +FPLILRYELSIGTLRFVIAPV +
Sbjct:    9 VGHAETMEDTLSVKN-PVQQPMHEDRKLIFLMRTSQCAQFKSLCECLKELLTDVNMEFIENKGIRLVSIDPGRVAMVHLVVNSVEYFYVKGTVTAGMNMAFLYRMIRSLSSGDYMEWRIYEDNPHAMNIELYNSDRRTRTVSSMKLLDLDEVEISIPNVEYDRVVSMPSSELSKHVREMVAVSNFVTVRGTRSTLEFIAEGEMASSHITIHPTASGLNWKFSEDVGDIEGKFVVRYLEKFGRVGVEANVELFLKTDFPLILRYELSIGTLRFVIAPVKD 286          
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Match: Q6XM81_9PHYC (FirrV-1-A6 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM81_9PHYC)

HSP 1 Score: 390 bits (1003), Expect = 8.460e-135
Identity = 195/262 (74.43%), Postives = 229/262 (87.40%), Query Frame = 1
Query:   61 KQPIEDGRKLLVLMRTSQCLQFKSLFECLKELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVINTVEYFYAHGTVIAGIEIKFLYRMIRSLASGDFMEWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLDLDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFIADGEMASSHITIRPTASGLNWKHSEDA-DDIQGKFVGRYLEKFGRVGVETNVEIFLKNEFPLILRYELSIGTLRFVIAPVVE 843
            +QP  DGRKL+ L+RTSQ  QFK+L ECLKELLT+VN+EFI+ KGIRLVSIDPG VAMVHLVIN+VEYFYA GTV AG+ + FLYRMIR L SGD MEW++FED P+ MHI+L N +RRT TV+ IKLLDLDEVDISIP +EYDRIVS+PSSEL+KHVREM+AVS+YVT++ T+TTL+FIA+G+MA+SHITI PTASGLNWK+S+D    I+GKFV RYLEKFGRVGVE NVE+FLK  FPLILRYEL+IGTLRFVIAPV +
Sbjct:    6 EQPTCDGRKLIALLRTSQSTQFKNLCECLKELLTDVNLEFIQDKGIRLVSIDPGRVAMVHLVINSVEYFYAQGTVTAGLNMSFLYRMIRCLTSGDSMEWRVFEDDPHTMHIELYNNDRRTRTVSSIKLLDLDEVDISIPEVEYDRIVSMPSSELSKHVREMIAVSNYVTVRTTKTTLQFIAEGDMATSHITIHPTASGLNWKYSDDVVGTIEGKFVVRYLEKFGRVGVEANVELFLKKNFPLILRYELTIGTLRFVIAPVKD 267          
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Match: D8LPF8_ECTSI (Proliferating cell nuclear antigen n=2 Tax=root TaxID=1 RepID=D8LPF8_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 3.740e-120
Identity = 170/262 (64.89%), Postives = 215/262 (82.06%), Query Frame = 1
Query:   61 KQPIEDGRKLLVLMRTSQCLQFKSLFECLKELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVINTVEYFYAHGTVIAGIEIKFLYRMIRSLASGDFMEWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLDLDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFIADGEMASSHITIRPTASGLNWKHSEDADDIQGKFVGRYLEKFGRVGVETNVEIFLKNEFPLILRYELSIGTLRFVIAPVVEN 846
            +QP   GR L+++M+TSQCLQFKSL ECLKELL EVN++FIE KGIRLVSIDPG VAM+HLV+N +E FYA GTV AG+ +  LY+MIRS+ S DFMEW+I+ED P+ M I+LSN+ERRT TV  IKLLDLD  DI IP++E+DR+VS+PSSEL+KHVREMV VS +++I+ T+TTLE +++GEMA SHITI PTASGLNWKHSE  +DI+GK+  RY+EKF +  +  NVE+FLK  +PLILR+E+SIG LRF IAP+ + 
Sbjct:   18 EQPSYKGRPLVLMMQTSQCLQFKSLIECLKELLCEVNMDFIEGKGIRLVSIDPGRVAMIHLVVNNIESFYAKGTVTAGLNVVVLYKMIRSMTSNDFMEWRIYEDEPHRMEIELSNSERRTKTVTSIKLLDLDAEDIIIPQVEFDRVVSMPSSELSKHVREMVTVSPFISIRATQTTLELVSEGEMAKSHITIEPTASGLNWKHSEKGEDIEGKYFARYIEKFTKNSLAINVELFLKANYPLILRFEISIGCLRFCIAPIQDG 279          
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Match: A0A836CHQ2_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ2_9STRA)

HSP 1 Score: 186 bits (472), Expect = 5.560e-54
Identity = 106/261 (40.61%), Postives = 168/261 (64.37%), Query Frame = 1
Query:   91 LVLMRTSQCLQFKSLFECLKELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVINTVEYFYAHGTVIAGIEIKFLYRMIRSLASGDFM-EWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLDLDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFIADGEMASSHITIRPTASGLNW------KHSEDADD--IQGKFVGRYLEKFGRVGVETNVEIFLKNEFPLILRYELSIGTLRFVIAPVVEN 846
            ++ MR+SQ  Q++ L + LK+L+TE  I F  + G++L+S+DP  VA++HL   + E++Y    +  G+ I  LY+M+R+L +G +M E+ +     + + IQL N+++RT T NK+KLL L +  + IP   + R++SIPS++L +HVRE+ A+S+ + IK T   L   A+G M SS I IRPTASG++W      + SE   D  ++G +  ++LE+F R  ++   EIF+K  +PL+LRY LS  T+R VIAPV E+
Sbjct:   36 ILCMRSSQTSQWRLLVDFLKDLITECPISF-SQDGMKLISLDPIKVALLHLQAKS-EFYYCKSEITVGMNITALYKMLRNLTTGGYMLEFSMSSKEMDVLSIQLINSDKRTCTSNKLKLLKLPQETLIIPSTNFQRVLSIPSADLQRHVRELAALSNKIKIKSTADQLILSAEGTMGSSEIVIRPTASGMHWISIDNNQESEGGGDAVVEGVYFSKFLERFSRP-LDPICEIFVKQNYPLVLRYVLSTATVRLVIAPVQED 293          
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Match: A0A835Z2Q5_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q5_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.040e-52
Identity = 95/256 (37.11%), Postives = 174/256 (67.97%), Query Frame = 1
Query:   91 LVLMRTSQCLQFKSLFECLKELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVINTVEYFYAHGTVIAGIEIKFLYRMIRSLASGDF-MEWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLDLDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFIADGEMASSHITIRPTASGLNW--KHSEDADDI-QGKFVGRYLEKFGRVGVETNVEIFLKNEFPLILRYELSIGTLRFVIAPVVEN 846
            +++MR++Q  Q++S+F+ +K++ TEV  +F + +G+ ++++DP  +A++ +   T E++Y    +  GI +  LYR++R+L S  + +E  +F++  + +H+Q++N ++R+   NKIKLL L +  I+IP   +DR++SIPSS+L +++RE+ ++S  +T+  TR  L   A G + SS IT+RPT+SG+++  K +E  D++   +F  RYLEK  R  ++++ E+FLK  +PL+LRY L+  T+R VIAPV ++
Sbjct:   26 ILMMRSTQTSQWRSIFDFVKDVTTEVPFKF-DTEGLSIITLDPLKIALISVRAVT-EFYYCKAPLNVGINVTVLYRLLRNLTSAGYVLEISMFQNETDVIHVQITNRDKRSVVRNKIKLLRLPDEVITIPSTTFDRVLSIPSSDLQRYIRELSSLSSKITVSSTRDELTLSAQGALGSSEITVRPTSSGVHFLFKDTEKHDEVVSARFYSRYLEKLCRP-IDSSTEVFLKKGYPLVLRYNLATATIRVVIAPVNDD 278          
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Match: A0A835YX88_9STRA (Proliferating cell nuclear antigen n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX88_9STRA)

HSP 1 Score: 182 bits (463), Expect = 3.110e-52
Identity = 100/257 (38.91%), Postives = 169/257 (65.76%), Query Frame = 1
Query:   88 LLVLMRTSQCLQFKSLFECLKELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVINTVEYFYAHGTVIAGIEIKFLYRMIRSLASGDF-MEWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLDLDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFIADGEMASSHITIRPTASGLNWKH--SEDADDI-QGKFVGRYLEKFGRVGVETNVEIFLKNEFPLILRYELSIGTLRFVIAPVVEN 846
            +LV MRT    Q+++L + LK+L++E  + F    G++LVS+DP +VA+V+L I + E++Y    +  G+ +  LY+M+R+L +G + +E  + ED P+ + + +SN ++RT T N+ KLL L +  I+IP   + R++SIPS++  +++RE+  VS+ + I+ TR  L   A+G   S+ I IRPTASG++W+   SE  D++ +G F  RY+E+F R  +++ VEIF+K  +PL+LRY+L   T+R VIA   ++
Sbjct:   66 ILVCMRTHHTQQWRTLTDALKDLISESPVTF-GPAGMKLVSMDPAHVALVNLQIQS-EHYYCKREITVGLNVAALYKMLRNLTTGGYILELSLSEDDPDHLRVLISNEDKRTRTSNRPKLLRLPDEIITIPPAVFQRVLSIPSADFQRYIRELSGVSNKIKIRSTRDVLVLSAEGTSGSTEIEIRPTASGMHWQFIDSEATDEVVEGVFYSRYVERFARP-LDSVVEIFIKQAYPLVLRYQLQAATVRLVIAQCTDD 319          
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Match: A0A835Z7L8_9STRA (Proliferating cell nuclear antigen n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L8_9STRA)

HSP 1 Score: 181 bits (459), Expect = 5.180e-52
Identity = 103/253 (40.71%), Postives = 162/253 (64.03%), Query Frame = 1
Query:  115 CLQFKSLFECLKELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVINTVEYFYAHGTVIAGIEIKFLYRMIRSLASGDFM-EWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLDLDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFIADGEMASSHITIRPTASGLNW------KHSEDADD--IQGKFVGRYLEKFGRVGVETNVEIFLKNEFPLILRYELSIGTLRFVIAPVVEN 846
            C Q++ L + LK+L+TE  I F  + G++L+S+DP  VA++HL   + E++Y    +  G+ I  LY+M+R+L +G +M E+ +     + + IQL N+++RT T NK+KLL L +  + IP   + R++SIPS++L +HVRE+ A+S+ + IK T   L   A+G M SS I IRPTASG++W      + SE   D  ++G +  ++LE+F R  ++   EIF+K  +PL+LRY LS  T+R VIAPV E+
Sbjct:   46 CSQWRLLVDFLKDLITECPISF-NQDGMKLISLDPIKVALLHLQAKS-EFYYCKSEITIGMNITALYKMLRNLTTGGYMLEFSMSSKEMDVLSIQLINSDKRTCTSNKLKLLKLPQETLIIPSTNFQRVLSIPSADLQRHVRELAALSNKIKIKSTADQLILSAEGTMGSSEIVIRPTASGMHWISIDNNQESEGGGDAVVEGVYFSKFLERFSRP-LDPICEIFVKQNYPLVLRYVLSTATVRLVIAPVQED 295          
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Match: A0A835Z117_9STRA (Proliferating cell nuclear antigen n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z117_9STRA)

HSP 1 Score: 176 bits (446), Expect = 5.950e-50
Identity = 93/254 (36.61%), Postives = 164/254 (64.57%), Query Frame = 1
Query:   91 LVLMRTSQCLQFKSLFECLKELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVINTVEYFYAHGTVIAGIEIKFLYRMIRSLASGDFM-EWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLDLDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFIADGEMASSHITIRPTASGLNWKHSEDA------DDIQGKFVGRYLEKFGRVGVETNVEIFLKNEFPLILRYELSIGTLRFVIA 831
            +V MRT    Q+++L + LK+L+ E  + F    G++L+S+DP +VA+++L + + E++Y       G+ +  LYRM+R+L +G ++ E  + E  P+ + I ++N E+RT T N++KLL L E  I+IP   + R++SIPS++  +++RE+  VS+ ++I+ T+  L   A G M ++ I +RPTASG++W+H E A      + ++G ++ +YLE+F R  ++  VEIF++  +PL+LRY +S   +R VIA
Sbjct:   49 VVCMRTHHTQQWRTLIDALKDLIPESPVTF-GASGMKLISMDPAHVALINLQVCS-EFYYCKRETTVGLNVAALYRMLRNLTTGGYLLEINLLESDPDHLSILVNNEEKRTRTSNRLKLLRLPEEIITIPPTVFQRVLSIPSADFQRYIRELSGVSNKISIRSTKDMLLLSASGTMGTTEIEVRPTASGMHWQHIESAASDEEEEAVEGVYLAKYLERFSRP-LDPVVEIFMRPAYPLVLRYSMSTAVVRLVIA 299          
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Match: A0A836CPH7_9STRA (PCNA_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPH7_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.460e-39
Identity = 96/279 (34.41%), Postives = 156/279 (55.91%), Query Frame = 1
Query:   91 LVLMRTSQCLQFKSLFECLKELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVINTVEYFYAHGTVIAGIEIKFLYRMIRSLASGDF-MEWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLDLDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFIADGEMASSHITIRPTASGLNWKHSED---------ADD----------------------IQGKFVGRYLEKFGRVGVETNVEIFLKNEFPLILRYELSIGTLRFVIA 831
            LVL+RTS   Q+++L + LK+L+ E  + F    G++LVS+DPG +A++  ++              G+ +  LYRM+R+L +G + +E  I E +P+ M + +SN E+R  T + +KLL L E  I+IP   + R++SIPS++  ++VRE+  VS+ + ++ +R  L   A G    + I IRPTASG++W+  E          ADD                      I G F+ +YLE+F R  +++ VEIFLK ++PL+LRY +    +R V+A
Sbjct:  126 LVLLRTSHSQQWRTLADALKDLVPECPVTF-GADGLKLVSMDPGMIALICWLM-------------VGLNVAALYRMLRNLTTGGYILELSIHESTPDRMSVVVSNGEKRVRTCHSLKLLRLPEEIITIPPAVFQRVLSIPSADFQRYVRELSGVSNRIRVRSSRDRLTLSATGVAGLTEIEIRPTASGMHWQFIEPXXXXXXXXXADDAPEXXXXXXXGASPPAAVEDPGIDGVFLSKYLERFSRP-LDSIVEIFLKRDYPLVLRYTMQTTVVRLVVA 389          
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Match: A0A6C0LE56_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LE56_9ZZZZ)

HSP 1 Score: 147 bits (370), Expect = 3.010e-39
Identity = 83/255 (32.55%), Postives = 156/255 (61.18%), Query Frame = 1
Query:   91 LVLMRTSQCLQFKSLFECLKELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVI--NTVEYFYAHGTVIAGIEIKFLYRMIRSLASGDFMEWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLDLDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFIADGEMASSHITIRPTASGLNWKHSEDADDIQGKFVGRYLEKFGR-VGVETNVEIFLKNEFPLILRYELS-IGTLRFVIAPVVE 843
            +V ++T Q    + LFE LK++LT+VN++    +G++++S+D    A+V+L +  N  E FY   ++ AG+ +  LY++I+S+ + D + + I   S  ++ I++ N E++TN +  +KLLD+DE  + IP IE+D + ++PS++   ++RE+  +++ VT++    T     +G+ A + I +  + + ++ K    A    G F  +YL  F +   + T VEI+LKN+FPLIL Y ++ +G L++ +AP+VE
Sbjct:    7 IVEIKTVQSNAIRILFEALKDILTDVNLQISSSEGLKIISMDGSKQAVVNLKLEANKFEKFYCKNSMRAGLNMTSLYKIIKSVKNSDIITFYILAGSSTKLQIEIENKEKKTNILTVLKLLDIDEDILDIPNIEFDTVKTMPSNDFQSYIRELSIITNKVTLESKNNTFSLSGEGDFAETKINVGDSNT-IDIKTEHHA---MGTFYIKYLLLFTKSTNLCTTVEIYLKNKFPLILVYNVANLGKLQYCLAPLVE 257          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig211.6412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B5LWG9_9PHYC1.380e-14273.48Putative PCNA n=1 Tax=Feldmannia species virus Tax... [more]
Q6XM81_9PHYC8.460e-13574.43FirrV-1-A6 n=1 Tax=Feldmannia irregularis virus a ... [more]
D8LPF8_ECTSI3.740e-12064.89Proliferating cell nuclear antigen n=2 Tax=root Ta... [more]
A0A836CHQ2_9STRA5.560e-5440.61Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A835Z2Q5_9STRA3.040e-5237.11Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A835YX88_9STRA3.110e-5238.91Proliferating cell nuclear antigen n=1 Tax=Tribone... [more]
A0A835Z7L8_9STRA5.180e-5240.71Proliferating cell nuclear antigen n=2 Tax=Tribone... [more]
A0A835Z117_9STRA5.950e-5036.61Proliferating cell nuclear antigen n=3 Tax=Tribone... [more]
A0A836CPH7_9STRA1.460e-3934.41PCNA_C domain-containing protein n=1 Tax=Tribonema... [more]
A0A6C0LE56_9ZZZZ3.010e-3932.55Uncharacterized protein n=1 Tax=viral metagenome T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig211contigL-elsbetiae_contig211:31337..32185 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViruses
Seed ortholog score356.7
Seed ortholog evalue1e-95
Seed eggNOG ortholog654926.Q8QNE7_ESV1K
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Proliferating cell nuclear antigen, C-terminal domain
EggNOG OGs4QCG1@10239,4QXUJ@35237
COG Functional cat.L
Best tax leveldsDNA viruses, no RNA stage
Best eggNOG OGNA|NA|NA
Exons1
Model size849
Cds size849
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815865.327606-CDS-L-elsbetiae_contig211:31336..321851622815865.327606-CDS-L-elsbetiae_contig211:31336..32185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig211 31337..32185 +
1691683154.8888323-CDS-L-elsbetiae_contig211:31336..321851691683154.8888323-CDS-L-elsbetiae_contig211:31336..32185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig211 31337..32185 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig211.6412.1prot_L-elsbetiae_contig211.6412.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig211 31337..32185 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig211.6412.1

>prot_L-elsbetiae_contig211.6412.1 ID=prot_L-elsbetiae_contig211.6412.1|Name=mRNA_L-elsbetiae_contig211.6412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=283bp
MQMGHCEEMEDSVANSEISGKQPIEDGRKLLVLMRTSQCLQFKSLFECLK
ELLTEVNIEFIEKKGIRLVSIDPGNVAMVHLVINTVEYFYAHGTVIAGIE
IKFLYRMIRSLASGDFMEWKIFEDSPNEMHIQLSNTERRTNTVNKIKLLD
LDEVDISIPRIEYDRIVSIPSSELAKHVREMVAVSHYVTIKGTRTTLEFI
ADGEMASSHITIRPTASGLNWKHSEDADDIQGKFVGRYLEKFGRVGVETN
VEIFLKNEFPLILRYELSIGTLRFVIAPVVEN*
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mRNA from alignment at L-elsbetiae_contig211:31337..32185+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig211.6412.1 ID=mRNA_L-elsbetiae_contig211.6412.1|Name=mRNA_L-elsbetiae_contig211.6412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=849bp|location=Sequence derived from alignment at L-elsbetiae_contig211:31337..32185+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAAATGGGTCATTGTGAGGAGATGGAAGACTCCGTGGCAAATTCGGA GATTTCCGGGAAGCAACCTATAGAGGACGGACGTAAACTCCTTGTCCTTA TGCGTACGTCACAATGCCTTCAATTCAAAAGTCTTTTCGAATGCCTCAAG GAGCTGCTCACGGAAGTCAACATAGAGTTTATCGAAAAAAAAGGTATTCG CTTGGTATCTATTGATCCCGGCAACGTGGCCATGGTCCATCTTGTCATCA ATACCGTGGAGTACTTCTACGCTCACGGGACCGTAATCGCTGGAATTGAA ATCAAGTTTTTATACCGCATGATACGGAGTCTGGCGTCCGGAGACTTCAT GGAGTGGAAGATATTCGAGGACTCTCCCAACGAGATGCACATACAGCTAT CGAACACCGAGCGCAGGACAAATACCGTCAACAAGATCAAACTCCTCGAT CTGGACGAAGTAGATATCAGTATACCTCGCATTGAGTACGACAGAATCGT TTCAATACCAAGCTCTGAGTTGGCCAAGCATGTCAGAGAGATGGTCGCAG TCAGTCACTACGTCACAATTAAAGGGACGAGGACGACGCTCGAGTTTATC GCCGACGGGGAAATGGCTTCGAGTCATATCACTATACGCCCAACCGCGTC TGGTTTAAACTGGAAGCATAGTGAGGATGCTGACGACATCCAGGGGAAAT TTGTTGGGCGATACCTTGAGAAGTTTGGTCGCGTTGGGGTTGAGACCAAT GTCGAGATTTTTCTAAAAAATGAATTTCCTCTCATCCTGAGGTATGAACT ATCTATCGGAACCTTACGATTTGTCATAGCACCTGTGGTGGAAAATTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig211:31337..32185+

>mRNA_L-elsbetiae_contig211.6412.1 ID=mRNA_L-elsbetiae_contig211.6412.1|Name=mRNA_L-elsbetiae_contig211.6412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1698bp|location=Sequence derived from alignment at L-elsbetiae_contig211:31337..32185+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAAATGGGTCATTGTGAGGAGATGGAAGACTCCGTGGCAAATTCGGA
GATTTCCGGGAAGCAACCTATAGAGGACGGACGTAAACTCCTTGTCCTTA
TGCGTACGTCACAATGCCTTCAATTCAAAAGTCTTTTCGAATGCCTCAAG
GAGCTGCTCACGGAAGTCAACATAGAGTTTATCGAAAAAAAAGGTATTCG
CTTGGTATCTATTGATCCCGGCAACGTGGCCATGGTCCATCTTGTCATCA
ATACCGTGGAGTACTTCTACGCTCACGGGACCGTAATCGCTGGAATTGAA
ATCAAGTTTTTATACCGCATGATACGGAGTCTGGCGTCCGGAGACTTCAT
GGAGTGGAAGATATTCGAGGACTCTCCCAACGAGATGCACATACAGCTAT
CGAACACCGAGCGCAGGACAAATACCGTCAACAAGATCAAACTCCTCGAT
CTGGACGAAGTAGATATCAGTATACCTCGCATTGAGTACGACAGAATCGT
TTCAATACCAAGCTCTGAGTTGGCCAAGCATGTCAGAGAGATGGTCGCAG
TCAGTCACTACGTCACAATTAAAGGGACGAGGACGACGCTCGAGTTTATC
GCCGACGGGGAAATGGCTTCGAGTCATATCACTATACGCCCAACCGCGTC
TGGTTTAAACTGGAAGCATAGTGAGGATGCTGACGACATCCAGGGGAAAT
TTGTTGGGCGATACCTTGAGAAGTTTGGTCGCGTTGGGGTTGAGACCAAT
GTCGAGATTTTTCTAAAAAATGAATTTCCTCTCATCCTGAGGTATGAACT
ATCTATCGGAACCTTACGATTTGTCATAGCACCTGTGGTGGAAAATTAAA
TGCAAATGGGTCATTGTGAGGAGATGGAAGACTCCGTGGCAAATTCGGAG
ATTTCCGGGAAGCAACCTATAGAGGACGGACGTAAACTCCTTGTCCTTAT
GCGTACGTCACAATGCCTTCAATTCAAAAGTCTTTTCGAATGCCTCAAGG
AGCTGCTCACGGAAGTCAACATAGAGTTTATCGAAAAAAAAGGTATTCGC
TTGGTATCTATTGATCCCGGCAACGTGGCCATGGTCCATCTTGTCATCAA
TACCGTGGAGTACTTCTACGCTCACGGGACCGTAATCGCTGGAATTGAAA
TCAAGTTTTTATACCGCATGATACGGAGTCTGGCGTCCGGAGACTTCATG
GAGTGGAAGATATTCGAGGACTCTCCCAACGAGATGCACATACAGCTATC
GAACACCGAGCGCAGGACAAATACCGTCAACAAGATCAAACTCCTCGATC
TGGACGAAGTAGATATCAGTATACCTCGCATTGAGTACGACAGAATCGTT
TCAATACCAAGCTCTGAGTTGGCCAAGCATGTCAGAGAGATGGTCGCAGT
CAGTCACTACGTCACAATTAAAGGGACGAGGACGACGCTCGAGTTTATCG
CCGACGGGGAAATGGCTTCGAGTCATATCACTATACGCCCAACCGCGTCT
GGTTTAAACTGGAAGCATAGTGAGGATGCTGACGACATCCAGGGGAAATT
TGTTGGGCGATACCTTGAGAAGTTTGGTCGCGTTGGGGTTGAGACCAATG
TCGAGATTTTTCTAAAAAATGAATTTCCTCTCATCCTGAGGTATGAACTA
TCTATCGGAACCTTACGATTTGTCATAGCACCTGTGGTGGAAAATTAA
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