mRNA_L-elsbetiae_contig211.6409.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig211.6409.1
Unique NamemRNA_L-elsbetiae_contig211.6409.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Match: Q6XM73_9PHYC (FirrV-1-A14 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM73_9PHYC)

HSP 1 Score: 146 bits (368), Expect = 5.050e-41
Identity = 76/157 (48.41%), Postives = 105/157 (66.88%), Query Frame = 1
Query:   10 VEFPRVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNESTKKCFVEAFSKISTISCRYVSCD-IEGDIGKKRNYACSLSKHNILAMMDDDDIYNKEYLKYSVSEMNKRRVNLVGCRDMLVFFPLFGNKMTCVRGSLVHEATIVCRKKH 477
            +E PRVS++TPTM SR +F  L + N+ SQT+P + +EWVVVGD + + +K F E+     +   RY      +  IG KRNYACS++   IL  +DDDD+Y+  Y++ +V E+  R+VNLVGCRDM+V+F     K+  VRGS VHEATIVC K+H
Sbjct:    1 MECPRVSILTPTMASRARFAPLALRNIVSQTYPASRIEWVVVGDADRTARKVF-ESLESPESPELRYFEYSGSDTSIGAKRNYACSVATSKILVNVDDDDLYHPRYVENAVRELRGRKVNLVGCRDMMVYF-FDDGKLIYVRGSHVHEATIVCTKQH 155          
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Match: A0A6C0CPF9_9ZZZZ (Glyco_trans_2-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CPF9_9ZZZZ)

HSP 1 Score: 70.1 bits (170), Expect = 3.940e-11
Identity = 45/132 (34.09%), Postives = 69/132 (52.27%), Query Frame = 1
Query:    7 SVEFPRVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNESTKKCFVEAFSKISTISCRYVSCDIEGDIGKKRNYACSLSKHNILAMMDDDDIYNKEYLKYSVSEMNKRRVNL-VGCRDMLVFF 399
            ++E P VSV TPT   R  FI  M+ N  SQT+P   +EW+++ D  +  +   V+   ++     +Y S D +  +GKKRN     SK +IL  MDDDD Y  E + +SV  +      L  G  ++ ++F
Sbjct:    2 TMELPFVSVCTPTFNRR-PFIEHMIRNFDSQTYPKEKMEWIIIDDGTDKIED-LVKDHPQV-----KYYSYDEKMPLGKKRNLMHKKSKGDILVYMDDDDFYPPERVAHSVEMLTVNPEALCAGSSEIYIYF 126          
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Match: A0A6C0M0E2_9ZZZZ (Glyco_trans_2-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0M0E2_9ZZZZ)

HSP 1 Score: 69.3 bits (168), Expect = 8.800e-11
Identity = 53/163 (32.52%), Postives = 78/163 (47.85%), Query Frame = 1
Query:   13 EFPRVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNESTKKCFVEAFSKISTISCRYVSCDIEGDIGKKRNYACSLSKHNILAMMDDDDIYNKEYLKYSVSEMNKRRVNLVGC--RDMLVFFPLFGNK-------MTCVRGSLVHEATIVCRKK 474
            + P VSVIT T + R  FI L    + +QT+P + +EWV+V D  +  K    +  S +  ++  YV  D    IG KRN   S +KH++L MMDDDD+Y    +   V+ +        GC    +L  + +   K       +T      V EATI C +K
Sbjct:  330 DLPSVSVITLT-RDRRAFIPLAKYCMVAQTYPESKIEWVIVDDGKDQIK----DLVSDLPNVT--YVLVDEPMTIGAKRNLGISRAKHDVLIMMDDDDVYPNNSILTRVAHLFMEPA--AGCLFSTVLPSYDIHETKSFMNVPPITLPMAQRVSEATICCTRK 483          
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Match: A0A6C0JXZ3_9ZZZZ (Glyco_trans_2-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JXZ3_9ZZZZ)

HSP 1 Score: 67.0 bits (162), Expect = 2.070e-10
Identity = 40/131 (30.53%), Postives = 70/131 (53.44%), Query Frame = 1
Query:   10 VEFPRVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNESTKKCFVEAFSKISTISCRYVSCDIEGDIGKKRNYACSLSKHNILAMMDDDDIYNKEYLKYSVSEMNKRR-VNLVGCRDMLVFF 399
            + +P VSVITPT   RT FI  ++   ++Q++P   +EW+V+ D  +S +  F      +  +  RY+  D +  IG KRN     +K  I+  MDDDD Y  E + + V++  +   + L G  ++ +++
Sbjct:    7 INYPLVSVITPTYNRRT-FIPSLIACFRNQSYPKDRMEWIVLDDGTDSVEDLFKAQEKALPML--RYIRNDEKQLIGAKRNRLNKEAKGQIIVAMDDDDYYPPERVSHVVTKFKQYPGIELAGSSEIYMYY 134          
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Match: A0A6C0AIS4_9ZZZZ (Glyco_trans_2-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AIS4_9ZZZZ)

HSP 1 Score: 66.2 bits (160), Expect = 1.040e-9
Identity = 45/161 (27.95%), Postives = 76/161 (47.20%), Query Frame = 1
Query:   13 EFPRVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNESTKKCFVEAFSKISTISCRYVSCDIEGDIGKKRNYACSLSKHNILAMMDDDDIYNKEYLKYSVSEMNKRR------VNLVGCRDMLVFFPLFG-NKMTCVRGSLVHEATIVCRKK 474
            + P +S++T T K R  F+ L   +   Q++P   LEWV+V D  +S +         I   + RY+ C+ +  I +KRN     + ++I+A MDDDD+Y    + +  + M K+          + C D+  +        MT  +   V EAT++  KK
Sbjct:  342 DLPDISIVTIT-KDRRVFMPLAKYSYMIQSYPEEKLEWVIVDDGEDSIEDTL------IGVPNVRYIRCESKLTISEKRNLGVQSAMYDIVAFMDDDDVYPNNSILHRTAMMLKQPRKECAFCTTIPCYDICKYSSFMNVPPMTLPQSKRVSEATLIFTKK 495          
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Match: A0A2U2PFN3_9SPHI (Glyco_trans_2-like domain-containing protein n=1 Tax=Pararcticibacter amylolyticus TaxID=2173175 RepID=A0A2U2PFN3_9SPHI)

HSP 1 Score: 64.3 bits (155), Expect = 1.510e-9
Identity = 42/136 (30.88%), Postives = 65/136 (47.79%), Query Frame = 1
Query:   10 VEFPRVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNESTKKCFVEAFSKISTISCRYVSCDIEGDIGKKRNYACSLSKHNILAMMDDDDIYNKEYLKYSVSEMNKRRVNLVGCRDMLVFFPLFGNK 417
            + FP VS I PT  +R K+I L + N   Q +P+  L  V++ D  E  K    +        + RY      G IG KRNYAC +SK  I+   DDDD Y  +++   VS + +   ++ G   +  + P+   +
Sbjct:    1 MSFPLVSCIMPT-ANRQKYIPLAINNFLQQDYPNREL--VIIDDGLEPAKALIPD------NPAIRYYYSAPLGSIGAKRNYACEISKGEIIVHWDDDDWYAADWISKEVSALIQSGADITGLNKVAFYSPVLNKR 127          
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Match: A0A076FG00_9PHYC (Putative glycosyltransferase n=1 Tax=Aureococcus anophagefferens virus TaxID=1474867 RepID=A0A076FG00_9PHYC)

HSP 1 Score: 65.5 bits (158), Expect = 1.940e-9
Identity = 41/133 (30.83%), Postives = 69/133 (51.88%), Query Frame = 1
Query:   22 RVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNESTKKCF------VEAFSKISTISCRYVSCDIEGDIGKKRNYACSL--SKHNILAMMDDDDIYNKEYLKYSVSEMNKRRVNLVGCRDMLVF 396
            ++S+ TPT KSR K +NL + N+K+QT+     EW++V       K+ F      ++  +KI  I  +Y+  D   +IG  RN    +  S+ N +   DDDD Y  +Y+++S+  M K      GC   +++
Sbjct:    5 KISITTPTTKSRAKCLNLQIRNIKNQTYNRFIKEWIIVSADKNWNKEDFNLCMQNLQNQTKIKIIY-KYLE-DSNENIGFLRNSLNDMISSETNYILAFDDDDYYQPQYIEHSIKSMRKTGKLAAGCTSHIMY 135          
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Match: A0A6C0ELQ5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ELQ5_9ZZZZ)

HSP 1 Score: 65.1 bits (157), Expect = 2.610e-9
Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = 1
Query:   13 EFPRVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNESTKKCFVEAFSKISTISCRYVSCDIEGDIGKKRNYACSLSKHNILAMMDDDDIYNKEYLKYSVSEM 348
            + P VS+IT T + R  FI L      +QT+P   +EWV+V D  +  K    +  S +  ++  YV  D    IG KRN A S +KH++L MMDDDD+Y    +   V+ M
Sbjct:  337 DLPPVSIITLT-RDRRMFIPLAKYCFLAQTYPEQLVEWVIVDDGTDPIK----DMVSDLPNVT--YVLVDEPMTIGAKRNLAISKAKHDVLVMMDDDDVYPNNSVLTRVAHM 441          
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Match: UPI001E5B14E3 (glycosyltransferase family 2 protein n=1 Tax=Mucilaginibacter sp. UR6-11 TaxID=1435644 RepID=UPI001E5B14E3)

HSP 1 Score: 63.5 bits (153), Expect = 2.950e-9
Identity = 42/136 (30.88%), Postives = 67/136 (49.26%), Query Frame = 1
Query:   10 VEFPRVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNESTKKCFVEAFSKISTISCRYVSCDIEGDIGKKRNYACSLSKHNILAMMDDDDIYNKEYLKYSVSEMNKRRVNLVGCRDMLVFFPLFGNK 417
            +EFP VS I PT  +R K+I L +     Q +P+T L   V+ D   ++ +  +    +I     RY      G IG KRNYAC +SK  I+   DDDD Y  +++   V  +N    ++ G  +++ + P    +
Sbjct:    1 MEFPLVSCIMPT-ANRQKYIPLALNYFMRQDYPNTEL---VIIDDGITSSRDLIPDDPRI-----RYFYSAPLGTIGLKRNYACEISKGEIIVHWDDDDWYADDWVSRQVKALNASGADITGLNNVVFYSPALNKR 127          
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Match: A0A6C0CHB5_9ZZZZ (Glyco_trans_2-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CHB5_9ZZZZ)

HSP 1 Score: 64.7 bits (156), Expect = 3.560e-9
Identity = 47/159 (29.56%), Postives = 74/159 (46.54%), Query Frame = 1
Query:   19 PRVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNESTKKCFVEAFSKISTISCRYVSCDIEGDIGKKRNYACSLSKHNILAMMDDDDIYNKEYLKYSVSEMNKRRVNLVG------CRDMLVFFPLFG-NKMTCVRGSLVHEATIVCRKK 474
            P VS++T T K R KF+ L       Q++P   LEWV+V D ++  +         I   + +YV CD +  I +KRN     + ++I+AMMDDDD+Y    +    + M K      G      C D+  +        ++  +   V EAT++  KK
Sbjct:  344 PDVSIVTIT-KDRRKFMPLAKYCYMIQSYPEDKLEWVIVDDGDDPIEDTL------IGVPNVKYVKCDRKMTIAEKRNLGVENAMYDIIAMMDDDDVYPNNSILQRTAMMLKEPSKECGFCTTIPCYDITKYTSFMNVPPLSLPQSKRVSEATLIFTKK 495          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig211.6409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
Q6XM73_9PHYC5.050e-4148.41FirrV-1-A14 n=1 Tax=Feldmannia irregularis virus a... [more]
A0A6C0CPF9_9ZZZZ3.940e-1134.09Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A6C0M0E2_9ZZZZ8.800e-1132.52Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A6C0JXZ3_9ZZZZ2.070e-1030.53Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A6C0AIS4_9ZZZZ1.040e-927.95Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A2U2PFN3_9SPHI1.510e-930.88Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A076FG00_9PHYC1.940e-930.83Putative glycosyltransferase n=1 Tax=Aureococcus a... [more]
A0A6C0ELQ5_9ZZZZ2.610e-937.50Uncharacterized protein n=1 Tax=viral metagenome T... [more]
UPI001E5B14E32.950e-930.88glycosyltransferase family 2 protein n=1 Tax=Mucil... [more]
A0A6C0CHB5_9ZZZZ3.560e-929.56Glyco_trans_2-like domain-containing protein n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig211contigL-elsbetiae_contig211:18648..19127 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViruses
Seed ortholog score65.9
Seed ortholog evalue2e-08
Seed eggNOG ortholog1474867.A0A076FG00_9PHYC
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transferase activity
EggNOG OGs4QCXA@10239,4QUZI@35237
COG Functional cat.S
Best tax leveldsDNA viruses, no RNA stage
Best eggNOG OGNA|NA|NA
Exons1
Model size480
Cds size480
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815865.2232316-CDS-L-elsbetiae_contig211:18647..191271622815865.2232316-CDS-L-elsbetiae_contig211:18647..19127Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig211 18648..19127 -
1691683154.84742-CDS-L-elsbetiae_contig211:18647..191271691683154.84742-CDS-L-elsbetiae_contig211:18647..19127Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig211 18648..19127 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig211.6409.1prot_L-elsbetiae_contig211.6409.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig211 18648..19127 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig211.6409.1

>prot_L-elsbetiae_contig211.6409.1 ID=prot_L-elsbetiae_contig211.6409.1|Name=mRNA_L-elsbetiae_contig211.6409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=160bp
MTSVEFPRVSVITPTMKSRTKFINLMVMNLKSQTFPHTHLEWVVVGDTNE
STKKCFVEAFSKISTISCRYVSCDIEGDIGKKRNYACSLSKHNILAMMDD
DDIYNKEYLKYSVSEMNKRRVNLVGCRDMLVFFPLFGNKMTCVRGSLVHE
ATIVCRKKH*
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mRNA from alignment at L-elsbetiae_contig211:18648..19127-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig211.6409.1 ID=mRNA_L-elsbetiae_contig211.6409.1|Name=mRNA_L-elsbetiae_contig211.6409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=480bp|location=Sequence derived from alignment at L-elsbetiae_contig211:18648..19127- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGTCAGTCGAATTTCCTCGGGTTTCGGTCATCACTCCCACAATGAA GTCTAGGACAAAGTTTATTAATTTGATGGTTATGAACCTCAAATCGCAGA CGTTTCCCCATACACACTTGGAGTGGGTGGTTGTTGGAGACACGAATGAA TCTACAAAAAAATGTTTTGTTGAGGCCTTCAGTAAAATCTCGACCATATC TTGCCGATATGTCTCGTGTGACATAGAGGGAGACATCGGGAAAAAGCGTA ATTACGCTTGTTCCCTGTCGAAACACAATATTTTAGCTATGATGGACGAC GATGACATATATAACAAAGAATATTTAAAATACTCTGTGTCGGAAATGAA TAAGCGAAGAGTCAATTTGGTCGGATGTCGAGACATGCTTGTTTTCTTTC CACTATTTGGAAACAAAATGACGTGTGTCAGAGGATCCCTTGTCCACGAG GCTACCATCGTTTGTCGAAAAAAACACTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig211:18648..19127-

>mRNA_L-elsbetiae_contig211.6409.1 ID=mRNA_L-elsbetiae_contig211.6409.1|Name=mRNA_L-elsbetiae_contig211.6409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=960bp|location=Sequence derived from alignment at L-elsbetiae_contig211:18648..19127- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGTCAGTCGAATTTCCTCGGGTTTCGGTCATCACTCCCACAATGAA
GTCTAGGACAAAGTTTATTAATTTGATGGTTATGAACCTCAAATCGCAGA
CGTTTCCCCATACACACTTGGAGTGGGTGGTTGTTGGAGACACGAATGAA
TCTACAAAAAAATGTTTTGTTGAGGCCTTCAGTAAAATCTCGACCATATC
TTGCCGATATGTCTCGTGTGACATAGAGGGAGACATCGGGAAAAAGCGTA
ATTACGCTTGTTCCCTGTCGAAACACAATATTTTAGCTATGATGGACGAC
GATGACATATATAACAAAGAATATTTAAAATACTCTGTGTCGGAAATGAA
TAAGCGAAGAGTCAATTTGGTCGGATGTCGAGACATGCTTGTTTTCTTTC
CACTATTTGGAAACAAAATGACGTGTGTCAGAGGATCCCTTGTCCACGAG
GCTACCATCGTTTGTCGAAAAAAACACTAGATGACGTCAGTCGAATTTCC
TCGGGTTTCGGTCATCACTCCCACAATGAAGTCTAGGACAAAGTTTATTA
ATTTGATGGTTATGAACCTCAAATCGCAGACGTTTCCCCATACACACTTG
GAGTGGGTGGTTGTTGGAGACACGAATGAATCTACAAAAAAATGTTTTGT
TGAGGCCTTCAGTAAAATCTCGACCATATCTTGCCGATATGTCTCGTGTG
ACATAGAGGGAGACATCGGGAAAAAGCGTAATTACGCTTGTTCCCTGTCG
AAACACAATATTTTAGCTATGATGGACGACGATGACATATATAACAAAGA
ATATTTAAAATACTCTGTGTCGGAAATGAATAAGCGAAGAGTCAATTTGG
TCGGATGTCGAGACATGCTTGTTTTCTTTCCACTATTTGGAAACAAAATG
ACGTGTGTCAGAGGATCCCTTGTCCACGAGGCTACCATCGTTTGTCGAAA
AAAACACTAG
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