mRNA_L-elsbetiae_contig211.6403.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig211.6403.1 vs. uniprot
Match: B5LWL0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL0_9PHYC) HSP 1 Score: 605 bits (1559), Expect = 1.500e-210 Identity = 306/537 (56.98%), Postives = 389/537 (72.44%), Query Frame = 1 Query: 4 IYQFLSKNGCFHNKENARTHTIMSGGCLYVAEDNYDEFLGIYAAEIRNGNKTLSFSELRSPDVFRMYFDVDILDTKTLNEEFLLRLSRNIQTTIGKFFPGIDPDSFKAVLCSTATKKEPTRVLRTFTKNGYHILFPFLRVTLPMALQLRFSVVSDLEKTFGKREVAVNPWADVLDKAPYYGGLKMCGSVKSVTCTDCKGKKKNVRRKPVVKDIITKIRRLRKKLYPRKDDPLFDYSNVMTIAKDEFKNEDLADLYSAYQDETGFLMCPKCGDKGTHLEDRYYMPVAVLDPDGTPSGPDLDHLNDDMHELMRWTSIRCGSSDQSTEGYVVPRGYQPSIPDGATGCLQIAGGMLERLSPGIYREAVNSEMFLNDALGIRTWKGKEILDPQTLAQITKEVRSFDDRYKEVDVRQVFEVKVVKSYMKPSISSDTRSHVQATSQTSAAMTNIVMANKVASATDRVLEMFSRVQVRVSGIGSTYCTNKGDEHNSNSVFFWISEEGMTQKCFSRKDAIGIHGKTCKDFRSAFKNISPPLRDLLF 1614 IY+FLS +GCF +K RTHTIMSGG LYVAE+ YDEFLG+YA EI GN+TL+FSEL+S VFRMYFD+D++D++ L+ + + LS+ + T+ KF+ ID D FK V+C+T K +P TF KNG H++FPFL VTL MALQLRF+ V DLE FG+R NPW DV+DKAPY+ GLKMCGSVK++TC++C GKKKNVR+KP V I+ IR +R+K YPR+DDP FDYSNVM+I KDEFKNEDLA+L+SAYQDETG L+CP CGDKG HLEDR+YMP VL DG+ + D+++L D+ HE MRWTSIR SD+ T GY VP GY + T LQI G L+ SPGIYREAVN+E+F +DA GI+TWKG EI P+TL I E+R++ Y+++ VRQ FE++V K+ +SS + + + S A+ N+ +ANKV RVLE+ +R+ VRV+G GS YC NKG EH SNS+FFWIS++G+ KCFSRKD +G GK CKDFRS K ISP L + LF Sbjct: 7 IYRFLSIHGCFKSKSTPRTHTIMSGGVLYVAEEYYDEFLGVYAREIDEGNRTLTFSELKSEGVFRMYFDIDMVDSRELSADDFVSLSQCVLETLRKFYIDIDQDLFKCVVCTT--KPKPLSDKDTF-KNGCHLIFPFLNVTLEMALQLRFAAVRDLETRFGRRSRDANPWCDVIDKAPYFNGLKMCGSVKTLTCSECGGKKKNVRKKPEVAAILRDIRNIRRKTYPRRDDPGFDYSNVMSIEKDEFKNEDLAELFSAYQDETGTLICPACGDKGWHLEDRFYMPAKVLHGDGSLAEADMEYLADNPHETMRWTSIRSRPSDRMTAGYTVPEGYTAPRTERPTNSLQILGAQLKSFSPGIYREAVNAEIFGSDAAGIKTWKGCEITAPKTLNLIAHEIRNYATVYQDLVVRQAFEMRVAKAVATSVVSSGSTRSKRGRAG-SKALENMAVANKVPGRERRVLEVVARIFVRVAGTGSLYCMNKGAEHTSNSIFFWISQDGIAHKCFSRKDVLGQSGKRCKDFRSELKPISPGLANALF 539
BLAST of mRNA_L-elsbetiae_contig211.6403.1 vs. uniprot
Match: Q6XM41_9PHYC (FirrV-1-A46 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM41_9PHYC) HSP 1 Score: 504 bits (1298), Expect = 1.170e-170 Identity = 265/556 (47.66%), Postives = 359/556 (64.57%), Query Frame = 1 Query: 4 IYQFLSKNGCFHNKENARTHTIMSGGCLYVAEDNYDEFLGIYAAEIRNGNKTLSFSELRSPDVFRMYFDVDILDTKTLNEEFLLRLSRNIQTTIGKFFPGIDPDSFKAVLCSTATKKEPTRVLRTFTKNGYHILFPFLRVTLPMALQLRFSVVSDLEKTFGKREVAVNPWADVLDKAPYYGGLKMCGSVKSVTCTDCKGKKKNVRRKPVVKDIITKIRRLRKKLYPRKDDPLFDYSNVMTIAKDEFKNEDLADLYSAYQDETGFLMCPKCGDKGTHLE-DRYYMPVAVLDPDGTPSGPDLDHLNDDMHELMRWTSIRCGSSDQSTEGYVVP---------------RGYQPSIPDGATGCLQIAGGMLERLSPGIYREAVNSEMFLNDALGIRTWKGKEILDPQTLAQITKEVRSFDDRYKEVDVRQVFEVKVVKSYMKPSISSDTRSHVQATSQTSAAMTNIVMANKVASATDRVLEMFSRVQVRVSGIGSTYCTNKGDEHNSNSVFFWISEEGMTQKCFSRKDAIGIHGKTCKDFRSAFKNISPPLRDLLFTET 1623 IYQFL +GCFHNK RTHTIMSGG LYV E+NYDEFLG+YA EI +GN+ L+FSEL+S DVFRMYFD+D+L+T+ L+ + + L R++ + +++ ++ D+FK V+C+T KK R + KNG H++FP LRV L ALQLRF +V LE T G R++ +NPW D++DKAPYY GLKMCGSVK++ C +CKG +N+ +P V +I+ +IR +R+K YPR D+ FDYSNV I KDEFK+E LA+L++ YQ+ETG+LMC CG++G +LE DR+YMP VL+ DG+ S +L++L+D+ HE MRWTSIRC SD+ T GY + RG S+ + CL G L +SPG+YREAVN + NDA IRTWKG+EI D + I +VR YK++ VRQVF + V K+ + R + + M I NKV A +V + + RVSG G++YC NK EH SN ++FWI+ EG+ QKCFSRKDA+G CK +RS IS L+ LF ++ Sbjct: 7 IYQFLRAHGCFHNKTIPRTHTIMSGGVLYVPEENYDEFLGVYAREIDSGNRGLTFSELKSGDVFRMYFDIDMLETRELDLSYFVHLCRDMVRAMRQYYTDVEEDTFKCVVCTTKPKK---RTQDEYIKNGCHVIFPSLRVNLETALQLRFFIVQALENTRGVRKIGINPWCDIIDKAPYYNGLKMCGSVKTIPCLECKGANRNITHRPEVVEIVRQIRNVRRKYYPRNDNLAFDYSNVFNIEKDEFKHETLAELFARYQEETGYLMCVACGNRGWYLEHDRFYMPAMVLNGDGSSSEGELEYLHDNPHEAMRWTSIRCRPSDEVTGGYTMSPDNVGQYLRYARYEHRGE--SVRNNTVTCLNKLGPELADMSPGMYREAVNGAIAGNDADVIRTWKGEEITDTDVIEAIQNDVRVIHSNYKQLQVRQVFHLGVGKTVKVNAFGEIARGKRK---KVLLMMAGIAEKNKVDMADKQVEQDTMVIVARVSGPGASYCMNKNREHGSNHIYFWITPEGIYQKCFSRKDALG--SLPCKAYRSGCYKISRALKLKLFPQS 552
BLAST of mRNA_L-elsbetiae_contig211.6403.1 vs. uniprot
Match: D8LP78_ECTSI (EsV-1-45 n=2 Tax=root TaxID=1 RepID=D8LP78_ECTSI) HSP 1 Score: 372 bits (955), Expect = 2.230e-119 Identity = 219/542 (40.41%), Postives = 311/542 (57.38%), Query Frame = 1 Query: 4 IYQFLSKNGCFHNKENARTHTIMSGGCLYVAEDNYDEFLGIYAAEIRNGNKTLSFSELRSPDVFRMYFDVDILDTKTLNEEFLLRLSRNIQTTIGKFFPGI-DPDSFKAVLCSTATKKEPTRVLRTF-TKNGYHILFPFLRVTLPMALQLRFSVVSDLEKTFGKREVAVNPWADVLDKAPYYGGLKMCGSVKSVTCTDCKGKKKNVRRKPVVKDIITKIRRLRKKLYPRKDDPLFDYSNVMTIAKDEFKNEDLADLYSAYQDETGFLMCPKCGDKGTHLEDRYYMPVAVLDPDGTPSGPDLDHLNDDMHELMRWTSIRCGSSDQSTEGYVVPRGYQPSIPDGATGCLQ--IAGGMLERLSPGIYREAVNSEMFLNDALGIRTWKGKEILDPQTLAQITKEVRS-FDDRYKEVDVRQVFEVKVVKSYMKPSISSDTRSHVQATSQTSAAMTNIVMANKVASATDRVLEMFSRVQVRVSGIGSTYCTNKGDEHNSNSVFFWISEEGMTQKCFSRKDAIGIHGKTCKDFRSAFKNISPPLRDLLF 1614 + ++L +N + T T+M+GG + V ++NYDEFL +YA E+R+ NKTLSFSELRS VF MYFDVD+L T L R+ IQ+ I ++ G + D F+ V+C T+ KK P+ T TKNGYH +FP LR+ L ALQLR+SVV +LEKT G R ++NPW+DV+DKAPY GGLKMCGS K V CTDCK K + K K +++++ +LRKK+YPR+ P FDY+++ I DEFK+ D Y Y D TGF C C + G +E R YMP VLD G LD L +D E+M++TSIRC ++ T G+ +P+G P P G + L L ++ VN++++L+DA +R WKG + D + L+ I +R+ Y V +R+V E + K KP+ S M ++ A+ + + + +R V V+G+GST+C NKG EH SNSV+F I+ Q+CFS+K I G TC ++RS + P + +LF Sbjct: 1 MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLQLYAEEVRSKNKTLSFSELRSDPVFCMYFDVDMLGTGVLGAAESSRIFSVIQSVIRSYYTGDQNDDRFRCVVCDTSVKKVPSADGETMLTKNGYHAIFPNLRINLSQALQLRYSVVYELEKTLGPRTGSLNPWSDVIDKAPYTGGLKMCGSFKRVKCTDCK--KTDPTFKDKKKALLSEMAKLRKKIYPRQ--PGFDYTDLSDIHSDEFKDAVFGDKYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQEGEKETSGFTIPKGV-PRAPTEENGANMRTFSSKSLTHLGSDMHAFTVNNDIYLSDAQTMRLWKGPRVEDARRLSVIETFLRNNVCSAYSSVQIRKVSESTIKKVAQKPNGGSKM-------------MNALIRAHAGTTPPSPDVALSNRYLVNVAGVGSTFCMNKGSEHASNSVYFIITATQCFQRCFSKKPEIRRGGTTCAEYRSYGFAVPPSVSAVLF 524
BLAST of mRNA_L-elsbetiae_contig211.6403.1 vs. uniprot
Match: A0A6H5KIA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA7_9PHAE) HSP 1 Score: 339 bits (870), Expect = 9.250e-107 Identity = 195/498 (39.16%), Postives = 285/498 (57.23%), Query Frame = 1 Query: 1 MIYQFLSKNGCFHNKENARTHTIMSGGCLYVAEDNYDEFLGIYAAEIRNGNKTLSFSELRSPDVFRMYFDVDILDTKTLNEEFLLRLSRNIQTTIGKFFPGIDPDS--FKAVLCSTATKKEPTRV-LRTFTKNGYHILFPFLRVTLPMALQLRFSVVSDLEKTFGKREVAVNPWADVLDKAPYYGGLKMCGSVKSVTCTDCKGKKKNVRRKPVVKDIITKIRRLRKKLYPRKDDPLFDYSNVMTIAKDEFKNEDLADLYSAYQDETGFLMCPKCGDKGTHLEDRYYMPVAVLDPDGTPSGPDLDHLNDDMHELMRWTSIRCGSSDQSTEGYVVPRGYQPSIPDGATGCLQ--IAGGMLERLSPGIYREAVNSEMFLNDALGIRTWKGKEILDPQTLAQITKEVR-SFDDRYKEVDVRQVFEVKVVKSYMKPSISSDTRSHVQATSQTSAAMTNIVMANKVASATDRVLEMFSRVQVRVSGIGSTYCTNKGDEHNSNSV 1476 M+ ++L N +N E THT+M+GG + V + YDEFL +YA E+ + NKT+SFSELRS F MYFD+D+LD+K L+ E LR+ IQ + F+PG D+ F+ V+C T K+ ++ TK+GYHI P LRVT+ ALQ+R+ VV +LEKT G R +N W+DV+DKAPY GLKMCGS K V CTD K K + K K +++ I RLR+K+YPR D F+YS++ + DEFK+ D+Y Y + TGF C C + G +E+R YMPV LD G +D L DD+ ++M++TSIRC + T G+V+P G P P G + L L + VN++++L+DA + WKG + D + L+ I K +R S + Y V +R+V E ++++ + S S + ++V A+ + + + +R V ++G+GSTYC NKG +H SNSV Sbjct: 1 MLLKWLRDNDFINNSERRTTHTLMTGGVVGVPHEQYDEFLRLYATEVESKNKTISFSELRSNPAFCMYFDIDLLDSKELSTEVGLRIYSLIQGVVRSFYPGSSGDTGRFQCVVCGTPPKRVDGEAGEKSLTKSGYHITLPNLRVTVEQALQIRYCVVYELEKTLGPRSDGLNAWSDVIDKAPYTNGLKMCGSFKRVKCTDYK--KTDPTFKDKKKALLSSIARLRRKIYPR--DRGFEYSDLADVQDDEFKDAMFGDMYGRYLELTGFNSCKTCLNTGKRIEERTYMPVLALDGSGDTDASLIDLLRDDLFKVMKYTSIRCKDGESETSGFVIPEGV-PKAPTEENGANMRTFSSKKLTHLGSDVQAFTVNNDIYLSDAQTMHLWKGPRVEDERRLSVIEKFIRESVCEMYSSVQIRKVCESRLIQKV------------IPRASGGSKLINSLVGAHSGSIPPPPPVSVSNRYLVNIAGVGSTYCMNKGADHTSNSV 481
BLAST of mRNA_L-elsbetiae_contig211.6403.1 vs. uniprot
Match: A0A7S7YF00_9VIRU (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii medusavirus TaxID=2080449 RepID=A0A7S7YF00_9VIRU) HSP 1 Score: 133 bits (334), Expect = 3.750e-29 Identity = 137/538 (25.46%), Postives = 224/538 (41.64%), Query Frame = 1 Query: 40 NKENARTHTIMSGGCLYVAEDNYDEFLGIYAAEIRNGNKTLSFSELRSPDVFRMYFDVDILDTKTLNEEFLLRLSRNIQTTIGKFFPGIDPDSFKAVLCSTATKKEPTRVLRTFTKNGYHILFPFLRVTLPMALQLRFSVVSDLEKTFGKREVAVNPWADVLDKAPYYG-GLKMCGSVKSVTCTDCKGKKKNVRRKPVVKDIITKIRRLRKKLYPR-KDDPLFDYSNVMTIAKDEFKNEDLADLYSAYQDETGFLMCPKCGDKGTHLEDRYYMPVAVLDPDGTPSGPDLDHLNDDMHELMRWTSIRCGSSDQSTEGYVVPRGYQPSIPDGATGCLQIAGGMLERLSPGIYREAVNSEMFLNDALGIRTWKGKEILDPQTLAQITKEVRSFDDRYKEVDVRQVFEVKVVKSYMKPSISSDTRSHVQATSQTSAAMTNIVMANKVASATDRVLEMFSRVQVRVSG------IGSTYCTNKGDEHNSNSVFFWISEEGMTQKCFSRKDAIG-IHGKTCKDFRSAFKNISPP--LRDLLFTE 1620 +K +H I +GG LYV DEF Y ++R S+ R VF ++ D+D+ D ++E L + +Q + + FP ++ + V+C E R R K G H+ +P + +T +AL +R +++ L + FG+R + NPW VLD+A Y GL+M GS K+ C +C+G K + V K ++ +R+ +++P K FD K + K + E C C + G R Y P+ VLD G P +L +L DD L ++R + + E P+IPD + + +Y E+ R + K LDP + T+ + D Y+ V+Q K A T ++ A A+A R +R++ +G +C NKG+EHNS++++F + +T CFSR A+ + G C+D F P L++LLF + Sbjct: 244 SKGEHESHLIFTGGVLYVPPSRQDEFKYHYLKDLRIAP---SYIGERRTAVFPLFGDLDMSDLDIPSQERLNEYYKCMQEVVAELFPDLNDYERRMVICQAPISFEKPRSRRY--KTGAHVYWPGIMITATIALVVRKAIIKRLRERFGERALPDNPWVKVLDEAVYTSNGLRMFGSFKADKCRECRGSGKTAIAQAVDKSLVL-LRKQPNEVHPALKGQTKFDTERTAESEKKKGKRSRKKKNDADVPKEP----CGLCLETGKTHVGRLYEPLLVLDGSGEPDDDELQNLLDDPEALYDACTLRHPTETPTVE---------PTIPD----------WLKDVKESDLYDGPSEEEL--------RRLRRKNQLDPGIARKGTR-LSPRDADYR--PVKQSLRGNEAK-----------------------ARTMLMDALTTANAYMRGGPKITRIEYESTGNYYIVKTDCRWCPNKGEEHNSSTIWFRVGYHTITTHCFSRLPAVRPVGGCACRDMER-FDAFGTPVELKELLFPD 717
BLAST of mRNA_L-elsbetiae_contig211.6403.1 vs. uniprot
Match: M1HID8_9PHYC (DNA primase n=13 Tax=Chlorovirus TaxID=181083 RepID=M1HID8_9PHYC) HSP 1 Score: 73.6 bits (179), Expect = 2.900e-10 Identity = 57/192 (29.69%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 4 IYQFLSKNGCFHNKENARTHTIMSGGCLYVAEDNYDEFLGIYAAEIRNGNKTLSFSELRSPDVFRMYFDVDILDTKTLNEE-----FLLRLSRNIQTTIGKFFPGIDPDSFKAVLC-STATKKEPTRVLRTFTKNGYHILFPFLRVTLPMALQLRFSVVSDLEKTFGKREVAVNPWADVLDKAPYYG-GLKM 558 I + K G ++ + +H ++ G L V + +++EFL YA + G K E + P VFRM++D+DI+ TKTL E F + ++ G D + LC S +KK V K G H+ F + VT +AL +R V+ LE+ + VN W D++D A + G G+++ Sbjct: 6 IISWCKKRG-YYGRTGDLSHVLLDKGVLCVPDSSHEEFLSEYARGVVKGGKFSCVVEYK-PKVFRMFYDLDIVATKTLAETMTSGTFSEEIDEILKEICGTTADLFDIGKTEVTLCISNVSKKVADGV-----KVGIHLTFNNIFVTSTVALHVRSKVLEKLEE---RNNPFVNKWEDIVDAAVHKGSGMRL 187 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig211.6403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig211.6403.1 >prot_L-elsbetiae_contig211.6403.1 ID=prot_L-elsbetiae_contig211.6403.1|Name=mRNA_L-elsbetiae_contig211.6403.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=541bp MIYQFLSKNGCFHNKENARTHTIMSGGCLYVAEDNYDEFLGIYAAEIRNGback to top mRNA from alignment at L-elsbetiae_contig211:10638..12419- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig211.6403.1 ID=mRNA_L-elsbetiae_contig211.6403.1|Name=mRNA_L-elsbetiae_contig211.6403.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig211:10638..12419- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig211:10638..12419- >mRNA_L-elsbetiae_contig211.6403.1 ID=mRNA_L-elsbetiae_contig211.6403.1|Name=mRNA_L-elsbetiae_contig211.6403.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3246bp|location=Sequence derived from alignment at L-elsbetiae_contig211:10638..12419- (Laminarionema elsbetiae ELsaHSoW15)back to top |