mRNA_L-elsbetiae_contig2109.6395.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2109.6395.1
Unique NamemRNA_L-elsbetiae_contig2109.6395.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Match: D8LRT6_ECTSI (Pyridoxamine 5'-phosphate oxidase-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT6_ECTSI)

HSP 1 Score: 547 bits (1409), Expect = 3.880e-193
Identity = 279/300 (93.00%), Postives = 290/300 (96.67%), Query Frame = 3 
Query:   45 MVSTAVSPQASTAPTEAVGATEGERAIILSITERARTVTHVADSGTLCTLSTGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKATGRVSLLCQTPREANGQPQAALARVTLVGGIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIVSKINNSKQEELQTVCKHFLNKATPDTVSVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKEHGFEWEDQGPPIQRYAEDILR 944
            MVS AV+    ++PTEA GAT+GERAIILSITERARTVTHVADSGTLCTLS+ GEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKA+ RVSLLCQTPREANGQPQAALARVTLVG IVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKP+KVYYVGGFGVLSKWLPV+EYETAEPDILADEASSIVSKINN KQE+LQTVCKHFLNKATPDTV+VTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKE+GFEWEDQGPPIQRYAEDILR
Sbjct:    1 MVSAAVA----SSPTEAAGATDGERAIILSITERARTVTHVADSGTLCTLSSSGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKASNRVSLLCQTPREANGQPQAALARVTLVGAIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPDKVYYVGGFGVLSKWLPVSEYETAEPDILADEASSIVSKINNGKQEDLQTVCKHFLNKATPDTVAVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKENGFEWEDQGPPIQRYAEDILR 296
[Close]
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Match: A0A836CD40_9STRA (Pyridoxamine 5'-phosphate oxidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD40_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 3.850e-135
Identity = 202/292 (69.18%), Postives = 233/292 (79.79%), Query Frame = 3 
Query:   72 ASTAPTEAVGATEGERAIILSITERARTVTHVADSGTLCTLSTGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKATGRVSLLCQTPREANGQPQAALARVTLVGGIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIVSKINNSKQEELQTVCKHFLNKATPDTVSVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKEHGFEWEDQGPPIQRYAEDILRK 947
            A+ AP   V   E ++AIILS  ERARTVTH+A SG+LCT S   +   +G+PFGSHVDYVLD QGWPIFLLAEASLHT+NIKA  +VSLLCQTP   + QP AA++RVTLVG +  ++D+DELIQLKA+F L H YA QL  SPRF FYKL+PEK+YYVGG+GVLSKWL V EYE A+PDILAD A+ I +KIN +KQ +L  VCK FLNK   D V +TTVDRLGLD+RV    LTDE+RIGF Q VSSVEDAKSEIVK+FQEAWEKE GFEWEDQGPP+QRYAEDILRK
Sbjct:    3 AAAAPQTKVNGAEDDKAIILSTVERARTVTHIASSGSLCTYSLTDDPELQGAPFGSHVDYVLDTQGWPIFLLAEASLHTKNIKANNKVSLLCQTPPAESSQPAAAMSRVTLVGYMETLEDEDELIQLKATFPLTHAYAAQLVDSPRFVFYKLRPEKIYYVGGYGVLSKWLDVQEYELAKPDILADNAARIAAKINKAKQGDLALVCKQFLNKPRVDNVVLTTVDRLGLDIRVTDGALTDEYRIGFTQTVSSVEDAKSEIVKVFQEAWEKEQGFEWEDQGPPVQRYAEDILRK 294
[Close]
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Match: A0A4D9D6I7_9STRA (DUF2470 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6I7_9STRA)

HSP 1 Score: 311 bits (798), Expect = 1.760e-99
Identity = 156/280 (55.71%), Postives = 208/280 (74.29%), Query Frame = 3 
Query:  111 GERAIILSITERARTVTHVADSGTLCTLSTGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKATGRVSLLCQTPREANGQP-QAALARVTLVGGIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIVSKINNSKQEELQTVCKHFLNKATPDTVSVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKEHGFEWEDQGPPIQRYAEDILRK 947
            G R I LS++ERARTVT+VA + TL T S         +PFGS+VDY+LD++GWP+ LL+E SLHTQNI+   +VSL  Q PR        AAL+RVTL+G IV V+ + EL  ++ ++S+VH+Y+++L +SP+F F KLKPE+VY+VGGFGV SKWL V++YE A PD+LA E + IV++IN   + EL+ +C+HFL     D V+ TTVDRLG+DLRV   +LTDE+R+GFR+ V S EDAKSE+VK+FQEAWE+EH + W D+ PP+ RYAEDILRK
Sbjct:   94 GARPIRLSLSERARTVTYVATAATLGTFSE-----TASTPFGSYVDYILDDKGWPVLLLSEQSLHTQNIRVNPQVSLFVQMPRSGKADAASAALSRVTLIGSIVPVEAE-ELPAIRTAYSIVHSYSERLVESPKFSFCKLKPERVYFVGGFGVQSKWLEVSDYEAAVPDVLAHEMARIVARINQEHEPELRLMCRHFLGARDVDQVTATTVDRLGIDLRVTTGELTDEYRVGFREKVVSTEDAKSELVKMFQEAWEREHDYAWTDELPPVIRYAEDILRK 367
[Close]
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Match: A0A6V2T0J3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2T0J3_HETAK)

HSP 1 Score: 297 bits (761), Expect = 3.610e-94
Identity = 153/277 (55.23%), Postives = 196/277 (70.76%), Query Frame = 3 
Query:  129 LSITERARTVTHVADSGTLCTLSTGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKATGRVSLLCQTPREANGQPQ-AALARVTLVGGIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIVSKINNSKQEELQTVCKHFLNKATPDTVSVTTVDRLGLDLRVKARDLTDEFRIGFR--QPVSSVEDAKSEIVKIFQEAWEKEHGFEW-EDQGPPIQRYAEDILRK 947
            L+ TE+ARTVTHV  SGTL TL    EA   G PFGSHVD+VL+EQGWP+FLL+E S+HT N KA   VSL  Q P     +P  A L RVT+ G +  + D DELI L+ +FS+ H YA++L +SP F FYKL+PE +YY+GGFGV + W+ V EYE A+PDILA E+ ++V+++N    E+L T+C  FL   +P   +VT +DRLG ++RV +   TDEFRIGF   Q V SVEDAKSEIVK+FQEAWEK+ G EW +D  PP+++YA DILRK
Sbjct:   77 LTKTEKARTVTHVCTSGTLATLGANAEA--RGFPFGSHVDFVLNEQGWPVFLLSEQSMHTLNFKAQNSVSLFAQQPAAQEAKPHPATLPRVTITGSMEKITDMDELILLRPTFSVAHGYAEKLVESPVFAFYKLRPESIYYIGGFGVNAAWVEVAEYEAAKPDILAYESPAVVARLNKKHAEDLATLCSQFLGVKSPQEATVTNLDRLGFNVRVSSGKETDEFRIGFNPLQQVFSVEDAKSEIVKLFQEAWEKKEGNEWAQDYQPPVEKYASDILRK 351
[Close]
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Match: A0A482S023_9ARCH (DUF2470 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S023_9ARCH)

HSP 1 Score: 291 bits (746), Expect = 4.910e-93
Identity = 140/269 (52.04%), Postives = 194/269 (72.12%), Query Frame = 3 
Query:  141 ERARTVTHVADSGTLCTLSTGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKATGRVSLLCQTPREANGQPQAALARVTLVGGIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIVSKINNSKQEELQTVCKHFLNKATPDTVSVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKEHGFEWEDQGPPIQRYAEDILRK 947
            ++ARTVT++  SGTLCT S   +   +G PFGS+VDYV+DE+GWPI LL E SLHTQNI+    VSL CQ PR    Q  AAL+RVT++G +  V  + EL+ LK +F ++H YA+Q+  SPRF FY+++P+K+Y+ GGFGV + W+ V +YE A PD+LA E  +++S++N  KQ EL  +C++FL     D V +  +D+LG+DLR+K  +LTDE+R+GFR PV S EDAKSE+ K+FQEAW++E G  + D  PPI +YAEDILR+
Sbjct:    2 DKARTVTYICTSGTLCTSSVMEDV--QGVPFGSYVDYVIDEKGWPILLLGEQSLHTQNIRKNSAVSLFCQLPRSQQSQTTAALSRVTIMGQVHPVPPE-ELLALKMAFIIIHPYAEQIADSPRFHFYRIQPQKIYFSGGFGVQATWVNVPDYEAARPDVLAQEVPTVLSRVNLDKQAELLLMCRYFLGLDDVDLVRIQAIDQLGIDLRLKRGELTDEYRVGFRHPVRSGEDAKSELTKLFQEAWQREQGCFFADDLPPITKYAEDILRQ 267
[Close]
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Match: A0A7S3M5B1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5B1_9STRA)

HSP 1 Score: 284 bits (727), Expect = 8.060e-89
Identity = 139/273 (50.92%), Postives = 197/273 (72.16%), Query Frame = 3 
Query:  132 SITERARTVTHVADSGTLCTLSTGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKATGRVSLLCQTPREANGQPQAALARVTLVGGIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIVSKINNSKQEELQTVCKHFLNKATPDTVSVTTVDRLGLDLRVKAR-DLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKEHGFEWEDQGPPIQRYAEDILRK 947
            SI ++ART+TH+  SGTLCT S   E   EG PFGS+VD++ DE GWP+ L++  SLHTQNI+ +  VSL CQ P++   Q  A+L+RVT++G I    ++D L  L+ +F+L+H Y++QL  SP+F   +LKPEK+++ GGFGV + W+ V EYE+A  D+LA+E   +++K+N  KQ EL  +CKHFL     + V V T+DRLG+DLR+K+  DLTDE+R+GFR  V+S E+AKSE+VK+FQEAWE+E G  + D+ P + +YAEDI+RK
Sbjct:   89 SIIDKARTITHICTSGTLCTTSVAPEM--EGFPFGSYVDFITDENGWPVLLISNQSLHTQNIQHSPAVSLFCQLPKQTATQASASLSRVTIMGHIERTPEED-LPALQMAFTLIHPYSEQLFNSPKFSLLRLKPEKIFFSGGFGVSATWVDVKEYESARADVLANEMPIVLAKVNLEKQGELLLLCKHFLGLQDVEVVRVQTIDRLGMDLRIKSGGDLTDEYRVGFRHAVNSAEEAKSEMVKLFQEAWEREQGCYYSDELPLVTKYAEDIIRK 358
[Close]
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Match: A0A6U4F2Y4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F2Y4_9STRA)

HSP 1 Score: 275 bits (704), Expect = 6.450e-86
Identity = 141/276 (51.09%), Postives = 191/276 (69.20%), Query Frame = 3 
Query:  129 LSITERARTVTHVADSGTLCTLSTGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKATGRVSLLCQTPREANGQPQAALARVTLVGGIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIVSKINNSKQEELQTVCKHFLNKATP---DTVSVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKEHGFEWEDQGPPIQRYAEDILRK 947
            LS+ ERAR+VT  A SGTLCT+S G     EG PFGS+VDYVLD  G P+ LL E S+HT+N+ A GRVS+L Q        P AA  R T+ G I  VDD +E++Q + ++SL H+YA+Q+ +SP F FYK+ PE+VYYVGGFGVLS+W+ V +Y+ A+PDILAD+ + +V K+N    EEL  +   +L +       ++ VTTVDRLG+DLRVK  D TDE+R+GFR   +++EDA+SEI K+FQEAWE  +G+   D  PP++  A+D LR+
Sbjct:   56 LSVPERARSVTQAAKSGTLCTISQGEL---EGMPFGSYVDYVLDNDGHPVLLLNEQSMHTRNMLADGRVSMLVQLKSTRREIPAAAQPRCTVAGRIAKVDDKEEILQNRVTYSLAHSYAEQVIESPSFSFYKIIPERVYYVGGFGVLSEWVDVQDYQQAQPDILADKTADLVDKVNEVNGEELPNLYTSYLAEEGDGELQSIRVTTVDRLGMDLRVKHGDYTDEYRLGFRMAATTLEDAQSEITKLFQEAWEVANGYYEGDTSPPVEVLAKDALRR 328
[Close]
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Match: A0A6U4F8L6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F8L6_9STRA)

HSP 1 Score: 272 bits (695), Expect = 1.020e-84
Identity = 139/272 (51.10%), Postives = 188/272 (69.12%), Query Frame = 3 
Query:  141 ERARTVTHVADSGTLCTLSTGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKATGRVSLLCQTPREANGQPQAALARVTLVGGIVDVDDDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIVSKINNSKQEELQTVCKHFLNKATP---DTVSVTTVDRLGLDLRVKARDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKEHGFEWEDQGPPIQRYAEDILRK 947
            ERAR+VT  A SGTLCT+S G     EG PFGS+VDYVLD  G P+ LL E S+HT+N+ A GRVS+L Q        P AA  R T+ G I  VDD +E++Q + ++SL H+YA+Q+ +SP F FYK+ PE+VYYVGGFGVLS+W+ V +Y+ A+PDILAD+ + +V K+N    EEL  +   +L +       ++ VTTVDRLG+DLRVK  D TDE+R+GFR   +++EDA+SEI K+FQEAWE  +G+   D  PP++  A+D LR+
Sbjct:   49 ERARSVTQAAKSGTLCTISQGEL---EGMPFGSYVDYVLDNDGHPVLLLNEQSMHTRNMLADGRVSMLVQLKSTRREIPAAAQPRCTVAGRIAKVDDKEEILQNRVTYSLAHSYAEQVIESPSFSFYKIIPERVYYVGGFGVLSEWVDVQDYQQAQPDILADKTADLVDKVNEVNGEELPNLYTSYLAEEGDGELQSIRVTTVDRLGMDLRVKHGDYTDEYRLGFRMAATTLEDAQSEITKLFQEAWEVANGYYEGDTSPPVEVLAKDALRR 317
[Close]
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Match: A0A6S8YP63_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YP63_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.640e-76
Identity = 138/296 (46.62%), Postives = 192/296 (64.86%), Query Frame = 3 
Query:  123 IILSITERARTVTHVADSGTLCTLSTGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKATG----RVSLLCQTPREANGQPQAA----LARVTLVGGIVDVD--DDDELIQLKASFSLVHTYADQLTQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIVSKINNSKQEELQTVCKHFLNKATPDTVSVTTVDRLGLDLRVKA-------RDLTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKEHGFEW--EDQGP----PIQRYAEDIL 941
            I L++ E+ARTV  V  SGTLCT S     G EG+PFGS VDYVLD+ G+P+ L+++ S+HT+NI   G     V+L  Q   ++N    A     ++R +    +  +D  D ++   ++  +S+ H YADQ+  SPRF FY+L P+ +YYVGGFGVLSKW+ VN+Y+ A PDILA++ASSI+SK+NN  +E+L     H L+    + + VT VDRLG+D+RV +       + +TDEFR+GFR PV SVEDAKSE++K+FQEAWEK  G  W  E++ P    PI + AED L
Sbjct:   79 IRLNVNEKARTVLSVCTSGTLCTTSN--HDGIEGAPFGSFVDYVLDDDGFPVLLMSDLSMHTKNILDAGLDKAMVTLFAQIDDKSNANQNAEKGQDVSRCSFTAKVQKIDPKDAEDYDSIRMKYSIAHAYADQVMDSPRFDFYRLIPQAIYYVGGFGVLSKWVDVNDYQKAVPDILANDASSIISKLNNEHEEDLFLTATHLLDVKDVEKIRVTGVDRLGMDIRVTSFQGARRNKMITDEFRVGFRIPVISVEDAKSEVLKVFQEAWEKGKGLTWGEEEEVPGSTVPIMKIAEDSL 372
[Close]
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Match: A0A7S1GRF9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GRF9_CYCTE)

HSP 1 Score: 244 bits (623), Expect = 3.570e-74
Identity = 138/296 (46.62%), Postives = 192/296 (64.86%), Query Frame = 3 
Query:  123 IILSITERARTVTHVADSGTLCTLSTGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIK-------ATGRVSLLCQTPREANGQPQAALARVTLVGGIVDVDDDD--ELIQLKASFSLVHTYADQLTQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIVSKINNSKQEELQTVCKHFLNKATP-DTVSVTTVDRLGLDLRVKARD-------LTDEFRIGFRQPVSSVEDAKSEIVKIFQEAWEKEHGFEWE--DQGP----PIQRYAEDIL 941
            I L++ E+ARTVT V  SGTLCT+S+    G +G+PFGS+VDYVLD+ G+P+ L+ E S+H+ NI+           V+L  Q      GQ    ++R +L G I  +D     ++  ++  +S+ H YADQ+  SP+F FY+L P ++Y+VGGFGVL+KW+ V EY++A PDILA EAS IV ++N   +E+L+    H LN  T  + V VT VDRLG+D+RV ++        LTDEFRIGFR PV SVEDAKSE++KIFQEAWEK +G+ W+  D+ P    P+ + A D L
Sbjct:   10 IRLNVNEKARTVTSVCTSGTLCTVSS--YDGIDGAPFGSYVDYVLDDNGFPVLLMNEMSMHSMNIRDNVDSDGGKRMVTLFTQLTGNTKGQD---VSRCSLTGMIEQIDPKTAMDIDAIRMRYSITHAYADQVMDSPKFGFYRLVPSRIYFVGGFGVLAKWVDVEEYQSAAPDILAMEASEIVGRLNRDHKEDLRLTATHLLNVETEIEKVQVTNVDRLGVDIRVTSQKGARRNKLLTDEFRIGFRIPVLSVEDAKSEVLKIFQEAWEKGNGYTWDADDELPGSTVPVMKIAADDL 300
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2109.6395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRT6_ECTSI3.880e-19393.00Pyridoxamine 5'-phosphate oxidase-related n=1 Tax=... [more]
A0A836CD40_9STRA3.850e-13569.18Pyridoxamine 5'-phosphate oxidase-like protein n=1... [more]
A0A4D9D6I7_9STRA1.760e-9955.71DUF2470 domain-containing protein n=2 Tax=Monodops... [more]
A0A6V2T0J3_HETAK3.610e-9455.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A482S023_9ARCH4.910e-9352.04DUF2470 domain-containing protein n=1 Tax=archaeon... [more]
A0A7S3M5B1_9STRA8.060e-8950.92Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6U4F2Y4_9STRA6.450e-8651.09Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U4F8L6_9STRA1.020e-8451.10Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6S8YP63_9STRA4.640e-7646.62Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S1GRF9_CYCTE3.570e-7446.62Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2109contigL-elsbetiae_contig2109:11604..20914 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score547.7
Seed ortholog evalue3.3e-153
Seed eggNOG ortholog2880.D8LRT6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Pyridoxamine 5'-phosphate oxidase
EggNOG OGs2RYPS@2759,COG0748@1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionPyridoxamine 5'-phosphate oxidase-related
Ec32 orthologEc-08_002370.1
Exons10
Model size1391
Cds size906
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2109.6395.1prot_L-elsbetiae_contig2109.6395.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2109 12045..20870 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815864.5173748-UTR-L-elsbetiae_contig2109:11603..120441622815864.5173748-UTR-L-elsbetiae_contig2109:11603..12044Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2109 11604..12044 -
1691683154.5046203-UTR-L-elsbetiae_contig2109:11603..120441691683154.5046203-UTR-L-elsbetiae_contig2109:11603..12044Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2109 11604..12044 -
1622815864.6493282-UTR-L-elsbetiae_contig2109:20870..209141622815864.6493282-UTR-L-elsbetiae_contig2109:20870..20914Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2109 20871..20914 -
1691683154.620331-UTR-L-elsbetiae_contig2109:20870..209141691683154.620331-UTR-L-elsbetiae_contig2109:20870..20914Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2109 20871..20914 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815864.5318718-CDS-L-elsbetiae_contig2109:12044..121091622815864.5318718-CDS-L-elsbetiae_contig2109:12044..12109Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 12045..12109 -
1691683154.5177698-CDS-L-elsbetiae_contig2109:12044..121091691683154.5177698-CDS-L-elsbetiae_contig2109:12044..12109Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 12045..12109 -
1622815864.5448096-CDS-L-elsbetiae_contig2109:13148..132181622815864.5448096-CDS-L-elsbetiae_contig2109:13148..13218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 13149..13218 -
1691683154.5252357-CDS-L-elsbetiae_contig2109:13148..132181691683154.5252357-CDS-L-elsbetiae_contig2109:13148..13218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 13149..13218 -
1622815864.5562665-CDS-L-elsbetiae_contig2109:18563..187141622815864.5562665-CDS-L-elsbetiae_contig2109:18563..18714Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 18564..18714 -
1691683154.5332654-CDS-L-elsbetiae_contig2109:18563..187141691683154.5332654-CDS-L-elsbetiae_contig2109:18563..18714Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 18564..18714 -
1622815864.568535-CDS-L-elsbetiae_contig2109:18941..190061622815864.568535-CDS-L-elsbetiae_contig2109:18941..19006Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 18942..19006 -
1691683154.5426886-CDS-L-elsbetiae_contig2109:18941..190061691683154.5426886-CDS-L-elsbetiae_contig2109:18941..19006Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 18942..19006 -
1622815864.5811036-CDS-L-elsbetiae_contig2109:19206..192811622815864.5811036-CDS-L-elsbetiae_contig2109:19206..19281Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 19207..19281 -
1691683154.5558937-CDS-L-elsbetiae_contig2109:19206..192811691683154.5558937-CDS-L-elsbetiae_contig2109:19206..19281Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 19207..19281 -
1622815864.590854-CDS-L-elsbetiae_contig2109:19620..196901622815864.590854-CDS-L-elsbetiae_contig2109:19620..19690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 19621..19690 -
1691683154.5662413-CDS-L-elsbetiae_contig2109:19620..196901691683154.5662413-CDS-L-elsbetiae_contig2109:19620..19690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 19621..19690 -
1622815864.601071-CDS-L-elsbetiae_contig2109:19856..199331622815864.601071-CDS-L-elsbetiae_contig2109:19856..19933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 19857..19933 -
1691683154.579678-CDS-L-elsbetiae_contig2109:19856..199331691683154.579678-CDS-L-elsbetiae_contig2109:19856..19933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 19857..19933 -
1622815864.6132276-CDS-L-elsbetiae_contig2109:20189..203001622815864.6132276-CDS-L-elsbetiae_contig2109:20189..20300Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 20190..20300 -
1691683154.5924644-CDS-L-elsbetiae_contig2109:20189..203001691683154.5924644-CDS-L-elsbetiae_contig2109:20189..20300Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 20190..20300 -
1622815864.6239917-CDS-L-elsbetiae_contig2109:20522..206371622815864.6239917-CDS-L-elsbetiae_contig2109:20522..20637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 20523..20637 -
1691683154.60358-CDS-L-elsbetiae_contig2109:20522..206371691683154.60358-CDS-L-elsbetiae_contig2109:20522..20637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 20523..20637 -
1622815864.6371424-CDS-L-elsbetiae_contig2109:20763..208701622815864.6371424-CDS-L-elsbetiae_contig2109:20763..20870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 20764..20870 -
1691683154.6118152-CDS-L-elsbetiae_contig2109:20763..208701691683154.6118152-CDS-L-elsbetiae_contig2109:20763..20870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2109 20764..20870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2109.6395.1

>prot_L-elsbetiae_contig2109.6395.1 ID=prot_L-elsbetiae_contig2109.6395.1|Name=mRNA_L-elsbetiae_contig2109.6395.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=302bp
MVSTAVSPQASTAPTEAVGATEGERAIILSITERARTVTHVADSGTLCTL
STGGEAGPEGSPFGSHVDYVLDEQGWPIFLLAEASLHTQNIKATGRVSLL
CQTPREANGQPQAALARVTLVGGIVDVDDDDELIQLKASFSLVHTYADQL
TQSPRFKFYKLKPEKVYYVGGFGVLSKWLPVNEYETAEPDILADEASSIV
SKINNSKQEELQTVCKHFLNKATPDTVSVTTVDRLGLDLRVKARDLTDEF
RIGFRQPVSSVEDAKSEIVKIFQEAWEKEHGFEWEDQGPPIQRYAEDILR
K*
back to top

mRNA from alignment at L-elsbetiae_contig2109:11604..20914-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2109.6395.1 ID=mRNA_L-elsbetiae_contig2109.6395.1|Name=mRNA_L-elsbetiae_contig2109.6395.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9311bp|location=Sequence derived from alignment at L-elsbetiae_contig2109:11604..20914- (Laminarionema elsbetiae ELsaHSoW15)
CAGGATCAAACGCGGCGAGATCGCCGAGTTATGGCCCACGCGAAATGGTA
TCTACGGCGGTTTCTCCTCAGGCGAGCACAGCTCCAACAGAAGCTGTCGG
GGCTACCGAAGGCGAAAGAGCCATCATCCTGTCCATTACCGAGAGAGCAA
GGTACGCTCCCACGAGCTGCAGCAAGATAGCACGACAACTCAAAACTGGC
TCCTTTGCTGCCACAACAGCACCTCGGGCTGACACTCCAGTTTCGTCTTA
ATCCCTGATGCTTTTTTTTTCTCGCAGGACGGTGACGCATGTTGCCGACT
CGGGCACGTTGTGCACACTATCGACAGGTGGAGAAGCCGGGCCGGAAGGG
TCTCCGTTCGGAAGCCACGTCGATTACGTGCTTGATGAGCAGGTTCGTTC
GTCTCGACGTGGCGCCGGCGATCTTGTTCCCTTGAAGCAGCCCCTCACAA
GCATTTGCCGCCGACCTTGTTTTTTCATTTCTGGGGGGGTGAAATTTTAC
GAGTCGCCATAAAATAGAGATAAACATTTTTACACATGATACTCAAACGC
GCGAACCATATTTCTGAGCGTGTTTTCACCCCATTTTGGTTGCTTCATCC
CCACTGACTGACAGGGCTGGCCAATCTTCCTTCTAGCAGAAGCATCACTC
CACACGCAAAATATCAAGGCGACTGGCCGAGTATCGCTTTTGTGCCAAAC
TCCTCGTGAAGCCAATGGCCAACCGGTGAGCACGCCGTTTGTTTCATGAG
GAGTTTCAACCATTGACAATTTTCACGCGTAGAGGTGACGCTGAGGTAGG
AATGGTCCTGATATATTGTGGCATACTACTGTTTTCCGTTTGTGCTTTCA
CACAACAATGCATTTGCTTGTGCGTGTAACAATGTCGAAAAAAAGAGTCA
TACATAATGGTCGCGCTCGAACGAACTCCTTAAAGTGATACGTTGCCGCC
CTCTTACCATGTTTCGACCAAAAACTAACAGCAAGCAGCTCTTGCACGAG
TGACCCTTGTTGGCGGGATCGTGGACGTGGACGACGACGACGAGCTCATT
CAACTCAAGTAAGGCGCTGTGCAGATGGTGCCTTGCGTGGTACATGATCT
AGGGGCAGGCAATTGGTTCTTGATGAGCGTCGCTAGAAATGCGTGATGTT
CGAATGTCATTCAGGGTTGCTTTTTGTGTGTCGTGTGCTCGCGACTAACT
CTGCGCCGGTGTGTTTGGTCGCAGGGCTTCCTTCTCGCTGGTGCACACAT
ACGCTGACCAGCTTACTCAGTCACCAAGATTTAAATTTTACAAGGTATGT
GCAGAAAAACAACACAAAAGGGCTGGAAATCGGGTCGAGCGCACATGAGA
TGCAGTCGAAAATCGAATAGGTTTGTATTCAGGCCCTCCTCGTAGTTTTG
TGTCATCATGGTTGTAAGTTATGGTGGTGTGATGGTATCTTGTCCCTGTC
GTATTTCGCCGTTTCTTGGCGAAGGTGTAAACGTTTCTTGTTCGTCTTGC
GTAGACACCCATGTGGTAGTTTACGGTGTCTCAAGCCGCTCGACGTCTCC
ACAAAGATTCGCGTGCTTGTTCGCTAGTATAAAAATACCAACCTCATGCG
TCTTGTATATGTGGTTCATCCATCCCCTGGAAGCTCAAGCCGGAGAAAGT
GTACTATGTGGGCGGATTCGGAGTGCTGTCCAAGTGGCTCCCTGTGAACG
AGTACGAGGTGAGCTAAACGAAGGGCATAGGAGTATATGTTGAGCGCTCG
TTGGTCCGGTGTACAGCAGAACGCAGGGAATCCGTGTTCTATTCGCGCGA
CCCAAGGCCGATGGTAGCCGTGGCGGCCGTGCTTCGTGTTTCATGCCGTC
AAGGACATGGATGCAACAATCGATCGATGTGACGCCTCGCTTCCTGCCCC
CTTTCCAGACAGCCGAGCCAGATATTCTGGCGGACGAAGCCTCGTCAATT
GTGTCCAAGATCAACAACAGCAAGTGAGTACAAACGCTTGAAAACATTAT
TGATAGACTAGGAAGCTTGATGTGTGGATTGCAATGAACACGGAAGCGTG
GTGTGATCCCAATTGTGGGGTTGTTTTGATGGCGTAAGGCAGCGACCACC
AGAACAATGTATGATTTTTTTGTTAATACCCAAACAACTAGTTGGACGCA
AGTGGGGAAGCGGGCCGTCATATGCTACTGCGTTTACTCATGCAACACAG
GCAAGAGGAGCTCCAGACCGTCTGCAAGCACTTCCTCAACAAAGCCACCC
CGGACACGGTATCGGTTACCACGGTAGACCGTCTGGGATTAGACTTGCGA
GTGAAGGCCAGGGACTTGACGGACGAGTTCAGGATTGGATTCCGGCAACC
GGTGAGCACAACGTGCATCGGTAAGACTCCGGTAGCGGCCGTGATGACTC
CCAGTTTTTGTACCGGTTGCGTGTCATGTGCTATTTATCTATTTGCGCTC
TTGCGTTAAAGGAAGTGGGCTGTCGGCACTTGCTGCGATGTGCACTGAAG
CACTTATCCGAAGTATATGCAGCAAGCATGTTCGTCTACGCACTTGTGGC
ACGCGTGTTGCCGAGGCCTTCGTGTCGGGGTGGGATATTTGTTTTTTTGT
TGTTTCCCCATTTTTTTGTTCCGGGATCCATTTGGTCATGACCTTAGCCA
ACGCTGGTGCTCGCCGCACAGACAACAGGTTGCATGAACAAATTGAGAGG
GCCTCAAGTAGGCCGTCATCTACGTCCACAAATAGTTGTCATGCCGTGGT
TTTGCGATCACGTGGAGAAATGCTGTGTGACCGATACAGCGACGAACCCG
GTTGCGGTTGCGTTCAAAGCCTCTTTGCCAGCTCCAAACAGGAAGCTTCA
AGCGCATGTGCCTGCCGTAGGAGTTAATCAAATCACCGCAAACTTGGCTA
CGGGAACAGATAAACAAGCATAAAAAGCAAATTTCTTGGTCCGATTTGGG
GATCAGCCTTCGGGGACGACGATCAAAAACATGGTGTGTAAGAAGCAGCG
GGAAACCTCGCATCGCAAAAATACCTCAACATTCCAACGTCTAACAAGCA
GCGGGAAACCTCGCATCACAAAAATGCCTCAACATTCCAACTGATTCGAG
TCAAGATTGGAACTTCAGCGATAAGTGCCTGTCCGAAGAAGACACTAAAT
CCAATTCTGTTTTCGAAGCCTCCCTCTAGAAGTACTAGAGAGACGGCCTG
ACTTGGTTCGATTTGGGGATCAACCCTACAAGGAGGGTTATTCCAGTTGC
AACGGCAAACCCTACAATATGTGTAACAGAGATCGGAGCGGCTCCGGGAA
ATCATTATTTGAGGATAAAAAAAAAAAAACGGGGTTTTGGTGTGTGTAGC
AACACGTGTGGTGTGTGGTGGGTCTCACGCATTAATTTCATCCAGCTATA
TTCATCCACGCATTCAAATTTCATCCACGCATTGGCCGGAAATATAGCTG
GGACTTGTTGGAAACCAAAATATCACCTGGCCCGCTGTGAATTGTGGGCC
ACGGGTTCGAGCCCCGGAAACATTATTTATTTTGCCACAACTTTTAACAC
TCCTTCTATTTTTCACCGGTTGAAGACATTCTCAGTGTTAAATTAAAGCA
GGCAGGATCGACACAAGAAGCCAGGGCCAGGCCCAAAAAAAATGGTTCAA
AAAACGTTTACGTTCAAGCGTGTAATTTCCTTACATAACAGAAGAGTCCC
GAAAATGGGGGGGGGGTGATAACGATCCATCCCCCTTATGAAGCTGGGAA
AGGCAATTTTTCAGCAATGGTGCACGGTTCTGCCGTCGGTAAGTACCACT
TGACGTCGGTAAGTGCCACATCGTGTTTTCTCTGGACACAGCACTCAGAT
CGCCCTGAAAAGTTGTACACGCATGTCAGCAGTAGCTAGAGGCGATTTGT
GAGAAAAACGGGTCGTGTGTCGGACACTACTGCTGCTGCAGCGGATGTTG
TGCGCCTTTTTCTCTTTTCCGGCCGTTGGAAATTTTTTACCGAGCCTTTT
CAGACTAATCGGTAGCTTCTTCCACACAGCGATCAAAACTGAACCACCTG
CAGGCATCAGAGACACCCTCTCCTCCTTGGTCATTGCTGCTGCTGCTGAA
AATAGATTGCTCTGCGTGGCATCGCGCTTTCCAACTTTCTTTCTTTTGGG
ACATCGTGACATTTCACCTATTTTAGGTAAAATAAATTGTTAGCCTGTGA
CCACGGGTGGGGGTCAGCTAGCCGCAGTAATAGGTGTTGGAATGGTACGG
GTATTATAGGGAAGTACTGGGTGGAGAGATCGGAACGGTTTTCAATTTTT
AATGTGAAGAAACAACTGAGCGCCCACCCCAGATGAGATACATTGCTACC
GATACCACAGAGTTCACTCTATGCCTAAAATGAGAGCTAGCTCTGCTAGG
CCCGTCTTAACATACGTTCACGTGGGGATTCCAACAGATGTGAAGATATT
AAGAAGGAACTGGAACTGACGTGCGGTATATTCAGATAAACTAAAAAATA
CTTATAGGTCGCTAACACACTTAGTAGAAATTATCTAATAGACCTAGTCT
ATCTAGTATGTATCTAGTATATAGGTGCTTTGAAAGAAAACAGTTAATCA
AACATGGAACCTAATCCGCAATAATAATGAGACGGGAGTCCATGAGATTC
AACCCGTATTCCATATAGTTACGGAACATTGGGCCGGCGAGTAGCAGAAC
ACCTAGAATTCCTTAGTTCCTTAGAACTAAGGTCTTCCCTCTGCACTAAG
CTCTCAGACCTATGTAGGAAATTGAAGCCGAAAAAAGTGTGATGAAGTCC
AAAAAAGTGTGATAAAAAAAGGGTAACGCTGTTCTTCGAAACTGTTTCGT
GAAAATCTCTGCACACACGGAAGATACAACAGCCCTCTCGCAGCCATTGC
CTTCCCATACGGCAGGAACACCGAACTGCTGACGGACAAGCGCGGTATGT
TCCCCATGCATCAAACTCTCGCCGATTTAGACGTCGATTCGCCTCCCTAA
AATAATAAGGAGGCGCCACAAACACAAACGTCCATCATCGAAATTCTCGC
ACCCAAGAAAAGCAACGGCCACCACATCTCGGCCATGCCTTCTCACACAG
CGCTCATCATGCCTTCGCACACAAAGAGAATACAGTGCTGCAGCATGGGA
AACGCGTAACCTACGACAGCATCTTATGGAATGCGGGATACTGTGAAACA
CAAAAAAAACGCGGCGAAATCGCGGAGACGGATCACGTATGTACTACGTG
CACCTACGACAGGCGTTACATATGTGGCGGGCGCCGTAGATCCTTCTCCC
CGAAAAGGTCACGTTCACCACTTCGCGGTCATGCCTTCACACACAGGGAA
CACAGACAACTGACGCACGGAAAGCCTCTGCCTTCGCACACAGCGGGGAC
CATAACAGAAGCACACCGTACGCTACGATGCGGTGGGCCGGTCGACCATT
TCGTAGTGTATATGATGTGCGGTGCAAATCGTTTATGGACACACATCACA
CGCACGCGGGCATACATACGTGTGCAGTCCTCATACAGGCCAATATATCT
CCTAGAAATAAGGATGGTTGCGTCTGCGTGCATGTGTGCGTATGTCCCGC
GAGTGAGGTGAATGTGTACGACAAGGGAAATGAAGAAAAATCTTGGGCCC
AGGCGCGTACGTACAGAGATGAAATTTCGGTCAACACGACACGCGGCAAC
TATGATCGATTTTTTTTCATTAATTAACCCGAGGGGACGCGAGAGACAAA
TGAAATTGTGTCGTGATTCACAGGGTTCTGGCCTGCGTCTTGGGCTCTCA
TCCGCCTGCTGCCAGAGGCTTGCTTCGGCATATAACTCTAGTATTAAGTG
TTTATGTCTAGAAACAAGTATATATATATATATGTACGTTCATGTGTTGT
GTGCCCCGCGAGTGAACTGCTTGTGTGCGAGAGGGGGGCGGACACGAAGA
AAAATGTTGGCCACAGGCATATACACAGGTGAAAAATTGATTGAGCACGA
CACGCAACTGCGATTTAAATAACCCGAAGGGACGCGAGAGTCAAATGAAA
ATAGCGAGTGCAAACACCTAGTCTACATCACAGAAAGCCGACGCTACCGA
GAAGAACAACGACTAATACAAAAACAAAAACTAAGGAAGCAGCCTAGGGT
AACCCACATATCTTAGGCCTTCTATATAAGAAGTCACCATCTCCCCTCTG
CATCATATCTGCCAGGTCAAACCACATTGACATGTAATGTTTTCCGGGGA
GAAACCCTCCGTGATGTTAAGCTAGTTGTGAATAGACGCGCATCATCATC
ACCGATAAATGGCAAACATGTCATCTATTCTACTTATTATTGTATTATAC
TACGGACTGAGGCTGATGATGTGCTAATTTAATATGACACAACAAAACGG
ATATCGGTACAATGTTTGACAACAATACTCCGCGTTGAGACTTTGCGCGC
TTGTGGCTCGTGTTGCCTGATCGCTCGTGTTGCTTGGTCACGACAAAGGT
GATCTTATATGTTAACCATTGATAGGAATGCAGGGATCACGAACAGGGAC
CATGTCGACGGAGTCAACCACCGCGGCCCATATGTGTAGGCCACGGTGAT
ATCTGGGTGTGTTCGCAACTCCCTCGCCACCGTATCTGGTCAAAAACTCC
AACGTTGAGGACGAAATTTGGTAGGGAGCAGCTGCTGTTGTGTGTTGGGG
TGTCTCTGCAAGGACAAAGGGTTGAGTCCATATTTGACAAAGATATTGGC
GACAACATGAAATCGATAGGGGTTTCAGTATGCGAAAAGGGGTCAAAAAT
TTGGTCGCGTGAATCAGTAGGCTAAGCACATCACAAGAATCACATCACAA
GAATCAGTAGGCTAAGCACATCACAAAAATCAGTAGGCTAAGCACATCAC
AAGATTTTATAGCCAGAAAAAAAATTGCGTGAGACAACAACCAACTTGAA
AGTTGGAATATGAAATCCGGCGTGTACTACTGCTGCTGCACCCTGTGTTT
CTTTACACCGCAATTTTGTGTGGAGACGACGAGCAGTCTCATATCACGTT
CTGCAGTTTGAGAGCAATACAGACCATAAGCAGCACGATGCGACCAGAAA
TCTCTGTAGTGTACTTGTCAAAGAGACATGTGAGCAACGATCCATTCATC
GGTAGCTGCGCAGGTTGTGTTGATGAGGGTTCTTTCGCAGCAACCTCATC
CTGTGATCAGAAAGTATGCGGAAAAACAGCAGCTGTGGGGTAGGAGGAAT
CAACTACAAGGGAAGTACCTCTAGCCAGAAGAACATGGTATGCACAGCGT
AGTGCTAAGAACTTCCTTGGGTATCTTGTGCAAGAAACCGCGTGTGAAAT
ACAGTCGTAGCCATCGAGATATCTGCCAAGATCTCGCGAACGTTCTTACT
TCTTTTTTTTCGTGCACCGCTGCTAAAAAATTGCCCTAGGATTTCAAGTT
TGCCCTGCCCATCTTCAACAGGCTGTGTAGGATAATAATGGCCGCGGAGT
TCCACAGGCCAAAAATCGTCATCATCATGCTTCACCAGAATCCCAGCTAC
ATTCCCGTATTTCCAAATCCCAGCTATATTCCGGCGAGAGAGGAGACATG
GGGCCCAGTTATGAATGGGAAGGGCTGATTGTAACTCATAGTGCAATTAA
ACTGCAAGCCTAACCAGACTGCTGTGTATGTATGTGTTCACGTAAGGTTT
CGTCGGTGGAAGACGCCAAGAGCGAAATTGTCAAGATATTCCAGGAAGCC
TGGGAAAAAGAGCACGGTGAGTTATTTTTGATCGTGTGTTGCAACTTGTT
GCTGTTTAAGGCTGCCCACGATCGACTTTACCGTTGACGACGGAAGGGAT
AGCCGTACCCTTCTCGCGATAAAACCCCAAGGCAAAGCACCGCAGGAGGA
AGGTGGGGCAAAAAACAAATATAAAAGAAGAAAAAAGCCCATGCTGTTCA
AAGAAGCAACACCGCAAACGTGCATGTTGTACACACACCGAAACGTGTGG
CAGGCGCCCGAATAAATGGGACGAAAACACACATATTACACGATCAGTGT
CTCGAACATTTTTTTACTTGATTTTAGACACCAAGATGTCGGTTTTGCCA
AATTGCCGGACAATTTTCAAACAATGGTGCAAGCAATGGTGCACCATCTC
CCTGGCGTATGCGGAAGTACGGAAGGGCCTAAAGAGTAACATAGCCGGGG
GGCAGGCTTCAAATAGATCTTTGTGCCTCGAGTGGCGGTGGGGCCAAAAT
AGCCTTTTTGGCTCATTTGGGACTACCGTAAAAATGCAGCCTAACCCCGA
CCTCAACCTATGGCGCACACCACGACTCTTACGCCAAACCAGAGGCTACG
AGGAGACACAGGTGTACTTGAATAGTATCTTAGAACAACCTCTGGCGTTC
TCAGCAGCGGTGGCAACCCCGTTTTGAAATGGCAGTGACGTTTGCCGTAT
CAAGAGCTAAGTTCTACCGACTGCCTGCCGACTACGTCAGTTTTTGCCGG
GTACGGACCACTAAACATAATATGCCTGTTCGCCTTTTCTGGGTTTCGGC
CTTTTCCCCACCTACACACAAGGAACAAGAGGAGAGGTGAAACATGGAAA
GATACGGGTTTGTCAGGTGCCGCTTTCATGCGAGTCGAGTCATCGCCCCG
CCCCCCCCCCCCCGTACCGATTTTCAGCCACGTAATCGTGTCCAGCCTTA
ATTGTTCGTACGTGTATCACCCATTCTCGGTCGCCCCGCGGATTAACTGT
TCCATTATCCCCGTCCAATCGTTTCATTTCTATTCGTTTGAAAAAACGAC
TGCAGGGTTTGAATGGGAGGACCAAGGACCGCCCATCCAGCGTTATGCCG
AGGACATCTTGAGAAAGTAGACCCTGTGTGTGTCGTGACGCAGGCGTCGC
GCACCTGCACACGGTAGACCTGCACACGGTAGCACTCAACTATTCCGAAG
GTTTTGGCAGGTGTTTTGTATCTTTTCTTCCGGATACCCACACGTTTACC
ATTTGTGGGTCGCTGCGTAGTCACCGCAGTGTTTTGAGTTTTACATATTT
TGGATTTTACATACGGCTGAAAAAGCGTTCATGGCGCCACGGCACCAGAG
TGACTCCAAACCGGGACACGGATCGTTTCGAGTTGCTCGGCAAAAAAACT
CAACGCTTCAAATGCGCAGTAACCGTTGACGGTAAGGGGATCCACAGAGT
TTACTTTTTGGATCCAGGGGCTCAGTGATGAGCACGATTGACTGAATGTT
TTAGAAGCCCTTTTTTGGGTACGCCAAAAATCAACCGCACGGGCCCTCCC
AAAAGTGCACT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2109:11604..20914-

>mRNA_L-elsbetiae_contig2109.6395.1 ID=mRNA_L-elsbetiae_contig2109.6395.1|Name=mRNA_L-elsbetiae_contig2109.6395.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1812bp|location=Sequence derived from alignment at L-elsbetiae_contig2109:11604..20914- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTATCTACGGCGGTTTCTCCTCAGGCGAGCACAGCTCCAACAGAAGC
TGTCGGGGCTACCGAAGGCGAAAGAGCCATCATCCTGTCCATTACCGAGA
GAGCAAGATGGTATCTACGGCGGTTTCTCCTCAGGCGAGCACAGCTCCAA
CAGAAGCTGTCGGGGCTACCGAAGGCGAAAGAGCCATCATCCTGTCCATT
ACCGAGAGAGCAAGGACGGTGACGCATGTTGCCGACTCGGGCACGTTGTG
CACACTATCGACAGGTGGAGAAGCCGGGCCGGAAGGGTCTCCGTTCGGAA
GCCACGTCGATTACGTGCTTGATGAGCAGGACGGTGACGCATGTTGCCGA
CTCGGGCACGTTGTGCACACTATCGACAGGTGGAGAAGCCGGGCCGGAAG
GGTCTCCGTTCGGAAGCCACGTCGATTACGTGCTTGATGAGCAGGGCTGG
CCAATCTTCCTTCTAGCAGAAGCATCACTCCACACGCAAAATATCAAGGC
GACTGGCCGAGTATCGCTTTTGTGCCAAACTCCTCGTGAAGCCAATGGCC
AACCGGGCTGGCCAATCTTCCTTCTAGCAGAAGCATCACTCCACACGCAA
AATATCAAGGCGACTGGCCGAGTATCGCTTTTGTGCCAAACTCCTCGTGA
AGCCAATGGCCAACCGCAAGCAGCTCTTGCACGAGTGACCCTTGTTGGCG
GGATCGTGGACGTGGACGACGACGACGAGCTCATTCAACTCAACAAGCAG
CTCTTGCACGAGTGACCCTTGTTGGCGGGATCGTGGACGTGGACGACGAC
GACGAGCTCATTCAACTCAAGGCTTCCTTCTCGCTGGTGCACACATACGC
TGACCAGCTTACTCAGTCACCAAGATTTAAATTTTACAAGGGCTTCCTTC
TCGCTGGTGCACACATACGCTGACCAGCTTACTCAGTCACCAAGATTTAA
ATTTTACAAGCTCAAGCCGGAGAAAGTGTACTATGTGGGCGGATTCGGAG
TGCTGTCCAAGTGGCTCCCTGTGAACGAGTACGAGCTCAAGCCGGAGAAA
GTGTACTATGTGGGCGGATTCGGAGTGCTGTCCAAGTGGCTCCCTGTGAA
CGAGTACGAGACAGCCGAGCCAGATATTCTGGCGGACGAAGCCTCGTCAA
TTGTGTCCAAGATCAACAACAGCAAACAGCCGAGCCAGATATTCTGGCGG
ACGAAGCCTCGTCAATTGTGTCCAAGATCAACAACAGCAAGCAAGAGGAG
CTCCAGACCGTCTGCAAGCACTTCCTCAACAAAGCCACCCCGGACACGGT
ATCGGTTACCACGGTAGACCGTCTGGGATTAGACTTGCGAGTGAAGGCCA
GGGACTTGACGGACGAGTTCAGGATTGGATTCCGGCAACCGGCAAGAGGA
GCTCCAGACCGTCTGCAAGCACTTCCTCAACAAAGCCACCCCGGACACGG
TATCGGTTACCACGGTAGACCGTCTGGGATTAGACTTGCGAGTGAAGGCC
AGGGACTTGACGGACGAGTTCAGGATTGGATTCCGGCAACCGGTTTCGTC
GGTGGAAGACGCCAAGAGCGAAATTGTCAAGATATTCCAGGAAGCCTGGG
AAAAAGAGCACGGTTTCGTCGGTGGAAGACGCCAAGAGCGAAATTGTCAA
GATATTCCAGGAAGCCTGGGAAAAAGAGCACGGGTTTGAATGGGAGGACC
AAGGACCGCCCATCCAGCGTTATGCCGAGGACATCTTGAGAAAGTAGGGT
TTGAATGGGAGGACCAAGGACCGCCCATCCAGCGTTATGCCGAGGACATC
TTGAGAAAGTAG
back to top