mRNA_L-elsbetiae_contig2103.6375.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Match: A0A126X1P8_SACJA (Putative LOV domain-containing protein n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A126X1P8_SACJA) HSP 1 Score: 154 bits (388), Expect = 1.140e-38 Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 3 Query: 1392 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDELMRDDNDDAGDEM 1622 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVN+VGVQ EVQEEAQDREFRERLRKIPLP+ELMRDDNDDAGDEM Sbjct: 149 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNYVGVQCEVQEEAQDREFRERLRKIPLPEELMRDDNDDAGDEM 225
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Match: D7FRW8_ECTSI (Aureochrome 4 n=2 Tax=Ectocarpales TaxID=2877 RepID=D7FRW8_ECTSI) HSP 1 Score: 155 bits (392), Expect = 1.770e-38 Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 3 Query: 1392 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDELMRDDNDDAGDEM 1622 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEV EEAQDR+FRERLRKIPLPDELMRDDN+DAGDEM Sbjct: 209 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVHEEAQDRDFRERLRKIPLPDELMRDDNEDAGDEM 285
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Match: A0A6H5KKT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A6H5KKT9_9PHAE) HSP 1 Score: 155 bits (393), Expect = 3.380e-37 Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 3 Query: 1392 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDELMRDDNDDAGDEM 1622 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEV EE+QDR+FRERLRKIPLPDELMRDDNDDAGDEM Sbjct: 349 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVHEESQDRDFRERLRKIPLPDELMRDDNDDAGDEM 425
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Match: A0A126X2H4_9PHAE (Putative LOV domain-containing protein n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A126X2H4_9PHAE) HSP 1 Score: 152 bits (385), Expect = 2.850e-36 Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 3 Query: 1392 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDELMRDDNDDAGDEM 1622 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEE QDR+F ERLRKIPLPDELM+DDNDD GDEM Sbjct: 335 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEGQDRDFHERLRKIPLPDELMKDDNDDGGDEM 411
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Match: A0A126X057_SARFS (Putative LOV domain-containing protein n=1 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A126X057_SARFS) HSP 1 Score: 132 bits (333), Expect = 9.850e-31 Identity = 63/72 (87.50%), Postives = 69/72 (95.83%), Query Frame = 3 Query: 1392 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDELMRDDNDD 1607 RDTSVCL+NYKADGTPFWNQFFVAALRDDTGKIVN+VGVQ EVQEEA+D EFRERLRKIPLP+ELM+D +DD Sbjct: 197 RDTSVCLLNYKADGTPFWNQFFVAALRDDTGKIVNYVGVQCEVQEEAEDGEFRERLRKIPLPEELMKDGHDD 268
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Match: A0A126X320_SARHM (Putative LOV domain-containing protein n=4 Tax=Sargassum TaxID=3015 RepID=A0A126X320_SARHM) HSP 1 Score: 134 bits (338), Expect = 4.590e-30 Identity = 64/72 (88.89%), Postives = 69/72 (95.83%), Query Frame = 3 Query: 1392 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDELMRDDNDD 1607 RDTSVCL+NYKADGTPFWNQFFVAALRDDTGKIVN+VGVQ EVQEEA+D EFRERLRKIPLP+ELM+D NDD Sbjct: 343 RDTSVCLLNYKADGTPFWNQFFVAALRDDTGKIVNYVGVQCEVQEEAEDGEFRERLRKIPLPEELMKDGNDD 414
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Match: A0A126WWZ7_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum integerrimum TaxID=1159339 RepID=A0A126WWZ7_9PHAE) HSP 1 Score: 134 bits (336), Expect = 7.780e-30 Identity = 65/75 (86.67%), Postives = 69/75 (92.00%), Query Frame = 3 Query: 1392 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDELMRDDNDDAGD 1616 RDTSVCL+NYKADGTPFWNQFFVAALRDDT KIVN+VGVQ EVQEEA+D EFRERLRKIPLP+ELMRD NDD D Sbjct: 341 RDTSVCLLNYKADGTPFWNQFFVAALRDDTDKIVNYVGVQCEVQEEAEDCEFRERLRKIPLPEELMRDGNDDEED 415
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Match: A0A126WZ27_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZ27_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.440e-26 Identity = 61/72 (84.72%), Postives = 66/72 (91.67%), Query Frame = 3 Query: 1392 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDELMRDDNDD 1607 RDTSVCLMNYKADGTPFWNQFFVAALRD+ KIVNFVGVQ EV+EE QD FRERLRKIPLP+ELMRD+N+D Sbjct: 311 RDTSVCLMNYKADGTPFWNQFFVAALRDENEKIVNFVGVQCEVKEETQDA-FRERLRKIPLPEELMRDENED 381
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Match: A0A836CJE1_9STRA (Aureochrome 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJE1_9STRA) HSP 1 Score: 103 bits (258), Expect = 5.360e-21 Identity = 46/70 (65.71%), Postives = 60/70 (85.71%), Query Frame = 3 Query: 1392 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDELMRDDN 1601 RDTSVCL+NYKADG+PFWN FF++ALRD G +VNFVGVQ EV++ A +F+E+LRKIPLPD+++ DD+ Sbjct: 185 RDTSVCLLNYKADGSPFWNNFFISALRDQNGVVVNFVGVQAEVKQ-APPEDFKEKLRKIPLPDDMLNDDD 253
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Match: A0A835Z0M1_9STRA (Aureochrome 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M1_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.650e-19 Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 3 Query: 1392 RDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDELM 1589 RDTSVCL+NY+ADGTPFWN FFV ALRD G+IVN VGVQ EV++ + EFRE++RK+PLP+ELM Sbjct: 232 RDTSVCLLNYRADGTPFWNNFFVGALRDQQGRIVNHVGVQAEVKQSPPE-EFREKVRKMPLPEELM 296 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2103.6375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2103.6375.1 >prot_L-elsbetiae_contig2103.6375.1 ID=prot_L-elsbetiae_contig2103.6375.1|Name=mRNA_L-elsbetiae_contig2103.6375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=71bp MNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRback to top mRNA from alignment at L-elsbetiae_contig2103:18408..21825+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2103.6375.1 ID=mRNA_L-elsbetiae_contig2103.6375.1|Name=mRNA_L-elsbetiae_contig2103.6375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3418bp|location=Sequence derived from alignment at L-elsbetiae_contig2103:18408..21825+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2103:18408..21825+ >mRNA_L-elsbetiae_contig2103.6375.1 ID=mRNA_L-elsbetiae_contig2103.6375.1|Name=mRNA_L-elsbetiae_contig2103.6375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=426bp|location=Sequence derived from alignment at L-elsbetiae_contig2103:18408..21825+ (Laminarionema elsbetiae ELsaHSoW15)back to top |