mRNA_L-elsbetiae_contig20961.6339.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Match: A0A6H5JZ81_9PHAE (Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ81_9PHAE) HSP 1 Score: 129 bits (323), Expect = 2.530e-34 Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 1 Query: 1 FELKEDEHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVTVRPELMRWTICAQEICF 201 FELKEDEHY KFL LV+ RP GVPLLTV NHCSP+DDPGVLVGMLPA VTVRPELMRWTICAQEICF Sbjct: 77 FELKEDEHYRKFLSLVEERPSGVPLLTVCNHCSPVDDPGVLVGMLPARVTVRPELMRWTICAQEICF 143
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Match: D7G278_ECTSI (Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G278_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 1.460e-18 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 7 LKEDEHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVTVRPELMRWTICAQEICF 201 L +DE + + + LV+ RP G PLLTV+NH S LDDP V+ +LP + VRP LMRW++C+QEICF Sbjct: 20 LVKDERHARLVDLVRDRPEGEPLLTVANHASTLDDPAVMAVLLPWDIVVRPRLMRWSVCSQEICF 84
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Match: A0A835ZCU4_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU4_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 8.510e-16 Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 7 LKEDEHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVT-VRPELMRWTICAQEICF 201 + +DEHY FL V+ R G PL+TVSNH PLDDP +L ++P + ++PELMR+TIC+Q+ICF Sbjct: 137 ITKDEHYAAFLRAVEARGNGTPLITVSNHACPLDDPCMLAALMPFRLAALKPELMRFTICSQDICF 202
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Match: A0A482USC8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482USC8_9ARCH) HSP 1 Score: 74.7 bits (182), Expect = 5.540e-15 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 1 Query: 1 FELKEDEHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVTVRPELMRWTICAQEICF 201 F + ED +Y FL LVK R PLLT+SNH S +DDPGVL +LP + ++P +R+++CAQE CF Sbjct: 117 FRIIEDGNYYNFLELVKKREGSRPLLTISNHRSLIDDPGVLSNILPFHMNIQPRYVRYSLCAQEYCF 183
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Match: L1K3X0_GUITC (Tafazzin family protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K3X0_GUITC) HSP 1 Score: 72.8 bits (177), Expect = 1.040e-13 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 4 ELKEDEHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVTVRPELMRWTICAQEICF 201 ++ ED ++ +L ++ RP G+PL+TV+NH S DDPG++ + P V + P MRW +C QEICF Sbjct: 19 QVVEDSRHEAWLARIRSRPAGIPLITVANHESCCDDPGLMGALTPWDVAIDPIRMRWGLCTQEICF 84
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Match: A0A7S0YW25_9CRYP (Tafazzin family protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YW25_9CRYP) HSP 1 Score: 67.4 bits (163), Expect = 8.840e-13 Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1 Query: 4 ELKEDEHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVTVRPELMRWTICAQEICF 201 E +DE Y ++ RP GVPLLTV NH S LDDPG++ ++P V + P +RW I Q+I F Sbjct: 40 EYVDDERYRFLQSSIRHRPSGVPLLTVCNHQSSLDDPGLMSSLIPWDVVLTPSRVRWAIATQDIVF 105
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Match: K0TQ94_THAOC (Tafazzin family protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQ94_THAOC) HSP 1 Score: 70.9 bits (172), Expect = 9.140e-13 Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 1 Query: 1 FELKEDEHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVTVRPELMRWTICAQEICF 201 + + +D+HY FL +V G R L+TVSNH S DDPGV+ +LP V V P+ RW IC+QE CF Sbjct: 111 YSIHDDKHYRHFLEVVLGDRRSQGLVTVSNHRSLFDDPGVVSCLLPLHVAVVPKYNRWGICSQEYCF 177
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Match: UPI0006A6F57F (N-acylphosphatidylethanolamine synthase-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6F57F) HSP 1 Score: 65.9 bits (159), Expect = 3.540e-12 Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 28 DKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVTVRPELMRWTICAQEICF 201 D L LV+ RP GVPL+TVSNH S LDDP + G +++ PEL RW + A++ICF Sbjct: 46 DTLLTLVRSRPPGVPLITVSNHMSTLDDPVMWGGFKGLLLSLDPELARWVLAAEDICF 103
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Match: A0A0D2ZXQ1_BRAOL (Tafazzin family protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D2ZXQ1_BRAOL) HSP 1 Score: 65.9 bits (159), Expect = 3.880e-12 Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 28 DKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVTVRPELMRWTICAQEICF 201 D L LV+ RP GVPL+TVSNH S LDDP + G +++ PEL RW + A++ICF Sbjct: 62 DTLLTLVRSRPPGVPLITVSNHMSTLDDPVMWGGFKGLLLSLDPELARWVLAAEDICF 119
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Match: I1HUV7_BRADI (PlsC domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1HUV7_BRADI) HSP 1 Score: 67.8 bits (164), Expect = 1.180e-11 Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 28 DKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVTVRPELMRWTICAQEICF 201 +K + GRP+G PLLTVSNH + +DDP V+ +LP SV + + +RWT+CA + CF Sbjct: 131 EKLEQALHGRPKGKPLLTVSNHVAAMDDPFVIASLLPPSVMMEAQKLRWTLCATDRCF 188 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20961.6339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig20961.6339.1 >prot_L-elsbetiae_contig20961.6339.1 ID=prot_L-elsbetiae_contig20961.6339.1|Name=mRNA_L-elsbetiae_contig20961.6339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=67bp FELKEDEHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPASVTback to top mRNA from alignment at L-elsbetiae_contig20961:2023..2223- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig20961.6339.1 ID=mRNA_L-elsbetiae_contig20961.6339.1|Name=mRNA_L-elsbetiae_contig20961.6339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=201bp|location=Sequence derived from alignment at L-elsbetiae_contig20961:2023..2223- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig20961:2023..2223- >mRNA_L-elsbetiae_contig20961.6339.1 ID=mRNA_L-elsbetiae_contig20961.6339.1|Name=mRNA_L-elsbetiae_contig20961.6339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=402bp|location=Sequence derived from alignment at L-elsbetiae_contig20961:2023..2223- (Laminarionema elsbetiae ELsaHSoW15)back to top |