mRNA_L-elsbetiae_contig2092.6329.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2092.6329.1
Unique NamemRNA_L-elsbetiae_contig2092.6329.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Match: D7FT02_ECTSI (Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT02_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 6.690e-131
Identity = 196/226 (86.73%), Postives = 208/226 (92.04%), Query Frame = 1 
Query:    1 KVIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGEDPENAAKIKETAKEIKTVEVKMVELGTKVSKLLPKIGNIVADDVPVSNDEEKDSKVVSTFGPNPKGDQYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSGDGVEEKYLIATSEQPMCAFHKGEWLKESELPLR 678
            +VIDLD +WR  R RID LNK +N +QKEVTKAKKAGGEDPENAAKIKE AKE+K VE KMVEL  +VSKLLPKIGNIVADDVPVSNDEEKD+KVVSTFGP P G++YMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKR YSVLQPP+FM+KDVMAGVAQLEQFDEELYKVSG G EEKYLIATSEQP+CAFHKGEWL ESELPLR
Sbjct:   31 EVIDLDTKWRESRSRIDFLNKDRNRYQKEVTKAKKAGGEDPENAAKIKEVAKEVKIVEAKMVELSQQVSKLLPKIGNIVADDVPVSNDEEKDNKVVSTFGPTPTGEKYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRNYSVLQPPYFMSKDVMAGVAQLEQFDEELYKVSGSGTEEKYLIATSEQPICAFHKGEWLGESELPLR 256
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BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Match: A0A836CAY7_9STRA (Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY7_9STRA)

HSP 1 Score: 305 bits (782), Expect = 6.330e-96
Identity = 151/226 (66.81%), Postives = 182/226 (80.53%), Query Frame = 1 
Query:    1 KVIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGEDPENAAKIKETAKEIKTVEVKMVELGTKVSKLLPKIGNIVADDVPVSNDEEKDSKVVSTFGPNPKGDQYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSGDGVEEKYLIATSEQPMCAFHKGEWLKESELPLR 678
            ++I +D+ WR  RG++D L K +N  QK+V  ++K G  D E  A+IK   +EIK  E ++  L  + ++LLPKIGNIVA DVP SNDEEKD++V    GP P G+QY HHHEVL+RIGGYEPERGV VAGHRAYFLRDAGLLLNQALI +G+AFL +R YSVLQPP+FM KDVM+GVAQLEQFDEELYKV G+G+EEKYLIATSEQP+CAFHKGEWL+E+ LPLR
Sbjct:   35 EIIRVDSAWRAGRGKLDLLGKERNRVQKQVGVSRKGGKPDVEGEARIKAIGEEIKAKEAELDALEKECARLLPKIGNIVAPDVPTSNDEEKDNEVTVEHGPKPTGEQYSHHHEVLYRIGGYEPERGVQVAGHRAYFLRDAGLLLNQALIQFGLAFLVQRGYSVLQPPYFMNKDVMSGVAQLEQFDEELYKVGGEGMEEKYLIATSEQPLCAFHKGEWLEETALPLR 260
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BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Match: A0A4D9CLN9_9STRA (Serine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLN9_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.240e-81
Identity = 139/226 (61.50%), Postives = 167/226 (73.89%), Query Frame = 1 
Query:    1 KVIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGEDPENAAKIKETAKEIKTVEVKMVELGTKVSKLLPKIGNIVADDVPVSNDEEKDSKVVSTFGPNPKGDQYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSGDGVEEKYLIATSEQPMCAFHKGEWLKESELPLR 678
            +V+  D  WR      D   KA+N  Q EV+K  KA  E  +  AKI+E  K++  ++  +     +V KLLPKIGNIV D VPVS DEE D++VV T+G    GD  +HHH++L RIGG+EPERG  VAGHR YFLRDAGLLLN AL+NYG++FLR RKYSVLQPP+FM +DVMAGVAQLEQFDEELYKV+GD  +EKYLIATSEQP+C FHKGEWL+E  LPLR
Sbjct:   35 EVLARDASWRKLVNDSDATRKARNAVQAEVSKKMKAKEECRDLVAKIQEFDKQVLEMDRAVKAAKEEVDKLLPKIGNIVDDSVPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALVNYGVSFLRARKYSVLQPPYFMNRDVMAGVAQLEQFDEELYKVTGD--DEKYLIATSEQPLCGFHKGEWLEEKTLPLR 258
[Close]
BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Match: A0A7S2V1X7_9STRA (Serine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1X7_9STRA)

HSP 1 Score: 251 bits (641), Expect = 4.670e-78
Identity = 135/227 (59.47%), Postives = 160/227 (70.48%), Query Frame = 1 
Query:    1 KVIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGEDPENAAKIKETAKEIKTVEVKMVELGTKVSKLLPKIGNIVADDVPVSNDEEKDSKVVSTFGPNPKGDQY-MHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSGDGVEEKYLIATSEQPMCAFHKGEWLKESELPLR 678
            +V++ D  WR     +D+L K +N  QKEV K KKA     +  A+IK   +EIK                    GN+V + VPVS DEE++   V T GP P  D+Y +HHHE L RIGGYEPERGVGVAGHRAYFLRDAG+LLNQALINYG+ FLR R+YS+LQPPFFM KD+MA VAQLEQFDEELYKV+GD  +EKYLIATSEQPMC FH+ EWL+E+ELP R
Sbjct:   29 EVVEKDQAWRDLVKTVDELGKRRNAVQKEVGKKKKAKEPCDDLVAQIKGFDEEIKXXXXXXXXXXXXXXXXXXXXGNMVDESVPVSQDEEENI-TVCTVGPTPSNDKYPLHHHEALWRIGGYEPERGVGVAGHRAYFLRDAGVLLNQALINYGMQFLRARQYSLLQPPFFMNKDLMAAVAQLEQFDEELYKVTGD--DEKYLIATSEQPMCGFHRNEWLQEAELPKR 252
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BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Match: A0A7S3Y3E5_HETAK (Serine--tRNA ligase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3E5_HETAK)

HSP 1 Score: 249 bits (636), Expect = 5.850e-77
Identity = 129/227 (56.83%), Postives = 161/227 (70.93%), Query Frame = 1 
Query:    1 KVIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGEDPENAAKIKETAK-EIKTVEVKMVELGTKVSKLLPKIGNIVADDVPVSNDEEKDSKVVSTFGPNPKGDQYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSGDGVEEKYLIATSEQPMCAFHKGEWLKESELPLR 678
            + ++ DN WR     ID+L K KN  QKE+ K  KA  + P    + K   + EI   E + ++L   V KLL +IGN+V DDVPVS DE ++   V T GP P G QY +HH +LH+IGGYEPERG  VAG+R YFLRDAG+ LNQALINYG+ F R+R YS+L  P+FM K++M+GVAQLEQFDEELYKVSG GV++ YLIATSEQP+C FHK EWL+  +LPLR
Sbjct:   35 ECVEKDNLWRTVVSTIDNLKKEKNAVQKEIGKHMKAKEQPPPELLERKAAVEAEILQKEAEKIDLEAVVQKLLNQIGNMVDDDVPVSQDEAENG-TVRTHGPTPSGPQYNNHHNLLHKIGGYEPERGSKVAGNRCYFLRDAGVRLNQALINYGMDFCRERGYSLLSTPYFMNKEIMSGVAQLEQFDEELYKVSGSGVQDSYLIATSEQPICGFHKDEWLQPGDLPLR 260
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BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Match: F0Y3J7_AURAN (Serine--tRNA ligase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3J7_AURAN)

HSP 1 Score: 247 bits (631), Expect = 6.430e-77
Identity = 134/232 (57.76%), Postives = 162/232 (69.83%), Query Frame = 1 
Query:    1 KVIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGEDP-ENAAKIKETAKEIKTVEVKMVELGTKVSKLLPKIGNIVADDVPVSNDEEKDSKVVSTFGPNPKGDQYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSG-DGVEEKYLIATSEQPMCAFHKGEWLKESELPLRQVPV 690
            KVI  D  WR     +DD+   KN  QKE+T  KKA  + P +  A +K    +   VE ++     KV KL   IGN+VADDV VS DEEKD++VVS +G       + HH E+L+ IGGYEPERGV VAGHRAYF  D G++LNQA+INYGI+FLRKR Y V+QPP+ M KDVMAGVAQL +FDE LYKVSG D   EKYLIATSEQP+CA+HKGEWLKE++LPLR   +
Sbjct:   35 KVIAEDEAWRKLTQDVDDIKAEKNKKQKEITTLKKAKADVPAQMLADLKALDAKRAAVEARVEPQAQKVKKLFSGIGNLVADDVVVSQDEEKDNEVVSRWGECAPTAAHSHH-ELLYMIGGYEPERGVRVAGHRAYFFTDVGVMLNQAVINYGISFLRKRAYKVMQPPYMMNKDVMAGVAQLSEFDEALYKVSGGDADSEKYLIATSEQPICAYHKGEWLKEADLPLRYAGI 265
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BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Match: A0A7S3ZR42_9STRA (Serine--tRNA ligase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR42_9STRA)

HSP 1 Score: 248 bits (633), Expect = 7.030e-75
Identity = 134/231 (58.01%), Postives = 163/231 (70.56%), Query Frame = 1 
Query:    1 KVIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGE-DPENAAKIKETAKEIKTVEVKMVELGTKVSKLLPKIGNIVADDVPVSNDEEKDSKVVSTFGPNPKGDQYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSGDGVEEKYLIATSEQPMCAFHKGEWLKESELPLRQVPV 690
            KVI  D +WR      DD    KN  QKE+T  KKA  E DP+    +K    ++K  E        KV KL   IGN+V D VPVSNDE+KD++VV+ +G   +  +Y HH E+L+ IGGYEPERGV VAGHRAYF  D G+LLNQA+INYGIAFLRK++Y +LQPP+ M KD+M GVAQL +FDE LYKV+G G +EKYLIATSEQP+CA+HKGEWL+ESELPLR   V
Sbjct:   94 KVIAEDEEWRRLVALADDKRGEKNAKQKEITALKKAKKEVDPQMLKDLKALDAKVKEAEAATEPQLQKVLKLFNTIGNLVEDSVPVSNDEDKDNEVVNKWGTCKQDAKYSHH-ELLYMIGGYEPERGVRVAGHRAYFFTDYGVLLNQAVINYGIAFLRKKQYKILQPPYMMNKDLMGGVAQLSEFDEALYKVTG-GDQEKYLIATSEQPICAYHKGEWLQESELPLRYAGV 322
[Close]
BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Match: A0A7S3MDB3_9STRA (Serine--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDB3_9STRA)

HSP 1 Score: 245 bits (625), Expect = 5.810e-74
Identity = 131/228 (57.46%), Postives = 159/228 (69.74%), Query Frame = 1 
Query:    1 KVIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGEDPENAAKIKETAKEIKTVEVKMVELGTKVSKLLPKIGNIVADDVPVSNDEEKDSKVVSTFGPNPKGDQYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSG--DGVEEKYLIATSEQPMCAFHKGEWLKESELPLR 678
            +VI  D +WR   G IDDL K +N  QKEV    KA        A+IK   +EI   E +   L  +V +L+  IGN+V   VPVS DE+KD+ VV  +G        ++HH++L RIGGYEPERG  +AGHR YFL+DAG+LLNQA INYGIAFLRKR Y+VLQPP+ M KD+MAGVAQLEQFDEELYKVSG  DG E+KYLIATSEQP+C +H  EWL+E  LP+R
Sbjct:   35 EVIAKDEKWRILTGTIDDLRKKRNAVQKEVAVKMKAKEAADAQVAEIKAIGEEILAAEAEQKALKIEVDRLVGTIGNLVESGVPVSQDEDKDNLVVRKWGVPRDPAGMLNHHDLLWRIGGYEPERGAQIAGHRGYFLKDAGVLLNQAFINYGIAFLRKRNYNVLQPPYMMKKDMMAGVAQLEQFDEELYKVSGGSDG-EDKYLIATSEQPICGYHANEWLEEKSLPIR 261
[Close]
BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Match: A0A7S2RSQ3_9STRA (Serine--tRNA ligase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RSQ3_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.280e-72
Identity = 124/233 (53.22%), Postives = 163/233 (69.96%), Query Frame = 1 
Query:    1 KVIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGEDPENAAKIKETAKEIKTVEVKMVELGTKVSKL-------LPKIGNIVADDVPVSNDEEKDSKVVSTFGPNPKGDQYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSGDGVEEKYLIATSEQPMCAFHKGEWLKESELPLR 678
            +VI LD +WR  +  +D+  K KN+  K V + KK      ENA   +E AK++    +K+ EL  KV ++       LPK+GN+V + V VSNDE+KD+++V+TFG    G+  + HH+VL RI GYEPERG   AGHR YFL+ AG++LNQALI+Y + FL K+ ++ LQPP+FM KDVMAGVAQL QFDEELY V G   +EKYLIATSEQP+CA+H G+WL ESELPL+
Sbjct:   19 RVIQLDCEWRTLQKDLDNAKKEKNIVSKLVGQKKKK----KENADVEQEQAKQLN---IKVAELAKKVDEVKLALDKELPKVGNLVHESVVVSNDEDKDNEIVNTFGDARSGEGLLPHHQVLWRIDGYEPERGSKAAGHRGYFLKGAGVMLNQALISYALQFLTKKGFTPLQPPYFMNKDVMAGVAQLSQFDEELYHVKGSEGDEKYLIATSEQPLCAYHMGDWLNESELPLK 244
[Close]
BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Match: A0A6U1RBV8_CYCTE (Serine--tRNA ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1RBV8_CYCTE)

HSP 1 Score: 234 bits (596), Expect = 2.890e-71
Identity = 135/249 (54.22%), Postives = 166/249 (66.67%), Query Frame = 1 
Query:    4 VIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGED-PENAAKIKETAKEIKTVEVKMVELGTKVSKLLPKIGNIVADDVPVSNDEEKDSKVVST----------FGPNPKGD-QY-------MHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSG-----DGVEEKYLIATSEQPMCAFHKGEWLKESELPLR 678
            V+  D QWR    + D L +  N  QKEV   KK   E   E  A++K   KEIK +E +M  +  K   LL KIGNIV  +VP+S DE+ D+ VV+           F P P+G  +Y       + H ++L RIGGYEP RG  VAGHRAYFL +AG+LLNQA+INYGIAFL+ R Y+V+QPPFFM KDVMAG+AQLE FDE+LYKVSG     +G  EKYLIATSEQP+CA+HKGEW+KE+ELPLR
Sbjct:   36 VLKEDAQWREMTAKRDKLRQDVNKLQKEVIGPKKKAKEPCDEEVAQMKAMQKEIKEMEAEMPLIEAKRDSLLSKIGNIVDPEVPISQDEDNDNLVVALSPDPPEAKEGFLPCPQGKIEYTLPAIAPLTHDDLLWRIGGYEPLRGQNVAGHRAYFLTNAGVLLNQAIINYGIAFLQARDYNVVQPPFFMNKDVMAGIAQLEDFDEQLYKVSGKTDDPEGQTEKYLIATSEQPLCAYHKGEWIKETELPLR 284
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2092.6329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT02_ECTSI6.690e-13186.73Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A836CAY7_9STRA6.330e-9666.81Serine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
A0A4D9CLN9_9STRA1.240e-8161.50Serine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S2V1X7_9STRA4.670e-7859.47Serine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa ... [more]
A0A7S3Y3E5_HETAK5.850e-7756.83Serine--tRNA ligase (Fragment) n=1 Tax=Heterosigma... [more]
F0Y3J7_AURAN6.430e-7757.76Serine--tRNA ligase (Fragment) n=1 Tax=Aureococcus... [more]
A0A7S3ZR42_9STRA7.030e-7558.01Serine--tRNA ligase n=2 Tax=Pelagomonas calceolata... [more]
A0A7S3MDB3_9STRA5.810e-7457.46Serine--tRNA ligase n=1 Tax=Spumella elongata TaxI... [more]
A0A7S2RSQ3_9STRA3.280e-7253.22Serine--tRNA ligase n=1 Tax=labyrinthulid quahog p... [more]
A0A6U1RBV8_CYCTE2.890e-7154.22Serine--tRNA ligase n=1 Tax=Cyclophora tenuis TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2092contigL-elsbetiae_contig2092:1159..4705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score396.7
Seed ortholog evalue7.2e-108
Seed eggNOG ortholog2880.D7FT02
Preferred nameEPRS
KEGG rclassRC00055,RC00523
KEGG koko:K01875,ko:K01885,ko:K14163
KEGG ReactionR03661,R03662,R05578,R08218
KEGG Pathwayko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120
KEGG ModuleM00121,M00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000166,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001525,GO:0001568,GO:0001569,GO:0001763,GO:0001817,GO:0001818,GO:0001944,GO:0002009,GO:0002181,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0004812,GO:0004818,GO:0004819,GO:0004827,GO:0004828,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006424,GO:0006425,GO:0006433,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006950,GO:0006952,GO:0006955,GO:0007275,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009069,GO:0009653,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010574,GO:0010605,GO:0010608,GO:0010629,GO:0010876,GO:0015711,GO:0015718,GO:0015849,GO:0015908,GO:0015909,GO:0016020,GO:0016043,GO:0016070,GO:0016259,GO:0016525,GO:0016874,GO:0016875,GO:0017076,GO:0017101,GO:0017102,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0022603,GO:0022607,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0035239,GO:0035295,GO:0035613,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042221,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043434,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044539,GO:0045087,GO:0045765,GO:0045892,GO:0045934,GO:0046483,GO:0046686,GO:0046872,GO:0046914,GO:0046942,GO:0046983,GO:0048514,GO:0048519,GO:0048523,GO:0048646,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051093,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0060429,GO:0060562,GO:0061138,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071345,GO:0071346,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071840,GO:0071944,GO:0072358,GO:0072359,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097452,GO:0098619,GO:0140098,GO:0140101,GO:1901265,GO:1901342,GO:1901343,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902679,GO:1903506,GO:1903507,GO:1903670,GO:1903671,GO:1904046,GO:1990837,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000181,GO:2001141
EggNOG free text desc.glutamyl-tRNA aminoacylation
EggNOG OGsCOG0008@1,COG0172@1,KOG1147@2759,KOG2509@2759
EC6.1.1.11,6.1.1.15,6.1.1.17
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016
Exons5
Model size693
Cds size693
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2092.6329.1prot_L-elsbetiae_contig2092.6329.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2092 1159..4705 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815858.6909194-CDS-L-elsbetiae_contig2092:1158..13421622815858.6909194-CDS-L-elsbetiae_contig2092:1158..1342Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2092 1159..1342 +
1691683150.7315784-CDS-L-elsbetiae_contig2092:1158..13421691683150.7315784-CDS-L-elsbetiae_contig2092:1158..1342Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2092 1159..1342 +
1622815858.7039292-CDS-L-elsbetiae_contig2092:1910..20651622815858.7039292-CDS-L-elsbetiae_contig2092:1910..2065Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2092 1911..2065 +
1691683150.7470744-CDS-L-elsbetiae_contig2092:1910..20651691683150.7470744-CDS-L-elsbetiae_contig2092:1910..2065Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2092 1911..2065 +
1622815858.7195237-CDS-L-elsbetiae_contig2092:2608..27451622815858.7195237-CDS-L-elsbetiae_contig2092:2608..2745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2092 2609..2745 +
1691683150.7591462-CDS-L-elsbetiae_contig2092:2608..27451691683150.7591462-CDS-L-elsbetiae_contig2092:2608..2745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2092 2609..2745 +
1622815858.7306228-CDS-L-elsbetiae_contig2092:3793..38871622815858.7306228-CDS-L-elsbetiae_contig2092:3793..3887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2092 3794..3887 +
1691683150.77016-CDS-L-elsbetiae_contig2092:3793..38871691683150.77016-CDS-L-elsbetiae_contig2092:3793..3887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2092 3794..3887 +
1622815858.7417228-CDS-L-elsbetiae_contig2092:4582..47051622815858.7417228-CDS-L-elsbetiae_contig2092:4582..4705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2092 4583..4705 +
1691683150.7883701-CDS-L-elsbetiae_contig2092:4582..47051691683150.7883701-CDS-L-elsbetiae_contig2092:4582..4705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2092 4583..4705 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2092.6329.1

>prot_L-elsbetiae_contig2092.6329.1 ID=prot_L-elsbetiae_contig2092.6329.1|Name=mRNA_L-elsbetiae_contig2092.6329.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
KVIDLDNQWRGCRGRIDDLNKAKNLFQKEVTKAKKAGGEDPENAAKIKET
AKEIKTVEVKMVELGTKVSKLLPKIGNIVADDVPVSNDEEKDSKVVSTFG
PNPKGDQYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALIN
YGIAFLRKRKYSVLQPPFFMTKDVMAGVAQLEQFDEELYKVSGDGVEEKY
LIATSEQPMCAFHKGEWLKESELPLRQVPV*
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mRNA from alignment at L-elsbetiae_contig2092:1159..4705+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2092.6329.1 ID=mRNA_L-elsbetiae_contig2092.6329.1|Name=mRNA_L-elsbetiae_contig2092.6329.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3547bp|location=Sequence derived from alignment at L-elsbetiae_contig2092:1159..4705+ (Laminarionema elsbetiae ELsaHSoW15)
AAGGTGATCGACCTGGACAACCAATGGCGGGGATGCAGGGGCCGCATCGA
CGACCTGAACAAGGCCAAGAACCTCTTCCAGAAGGAGGTGACCAAGGCCA
AGAAGGCTGGGGGAGAGGACCCCGAGAACGCCGCCAAGATCAAGGAGACG
GCCAAGGAGATCAAGACCGTGGAGGTCAAGATGGGTGAGTTGTGTTTTGT
TTTTTTATGGGCGAGTTGCTTGCTTGTCTTCGTTGCTGTTGGGTCAGCAC
GGGGGGTGTGGGCAGTCAGTCTTCTCTCTGGTGGTCGTATTTCGGTGAGA
TGTATGTATGTGCCGTATTTTGACCCGTTCTTGACGCGCACCCTCTCCTC
CGTGCGGTGTTTTGTTCTCCCTTCCTTTCCTCCGCCTTGTCTTCCTCTCT
TGACTTCCTCTCTTATCTTTGTTTTTCTCTCTATCTCCTGTTCTGTCTCT
TTCTCCCTCTGTCTCTCTATCTCTCTCTCTCCCCCCCCTGCCTCCGTTCA
ACGCACTTGTCTCTCTATCTCTCTCTGTCTCTCTCTGTCTCTGCCTCTGT
CTCTTTTTATCTGCCTCTGTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCT
CTACCTGTGTCTCTGTGTCTCTCTTTCGGTCCGCCCCTGCCTCCTTGTCT
CCTGCCCCCCCTTTTCCCTGCCTCCCTGCCTCCCTTCCTCCCTCCAACCG
TCCCTTCCCCTATATCTCCCGCTGCCTCTGACTTCTTGTCTGTGTTCCGC
AGTGGAGCTGGGCACGAAGGTGTCCAAGCTGCTGCCCAAGATCGGCAACA
TCGTGGCCGATGACGTGCCGGTATCCAACGACGAGGAGAAAGACAGCAAG
GTGGTCAGCACCTTCGGCCCCAACCCAAAGGGGGACCAGTATATGCACCA
CCACGAGGTACGTACATACGTTTATGTGTGTGTGTGAACATCGACGATTC
TGCGTGCAGGGCGTCTCTGTTCTGCGCCGCCTGGGCGTCAAGGACACTGT
TGTTTGTTCTGATACATTTGTGAAGTATCTCTGTCGTGACGCTCGTGTGC
AGTACGTACGTAGTTTTCAAGTATCTTTATCGCGACGCTCTCGTGTTTTT
TTGTGTCCAAAAGATATTGCCCACGCGTCGTTCTCTGTGCTGCCGCCTGC
GCCCGCTGAGAGGTAGGTTGCCGGGTGTTGGTAAAACCATGTACCGCTGG
CTGTTCGCGGTGCTCGCTCCGGTCTGGAGGGATGGGTCTTTTTTCCGAGA
CGGTGCAGATCGATTCGCCTGACCGTGCCGCACCCTTGAAAGCGTGGCCC
AGCTCGGTATCCCGAGAGGTTGCAACGTCTCCGTTGCCTCAGCATTCGTG
GACACCCCCCACGAAAGTTGGTTCCCTCGCGTGGCCGTTTTGAATCCCCG
ACATGAATACATATTAACAACACCACGTTACACATGAAATCAACAATCAG
GTGTTGCACCGCATCGGGGGCTACGAGCCCGAGCGGGGGGTGGGGGTGGC
GGGGCACCGTGCTTACTTCTTGAGGGACGCCGGGCTGCTCTTGAACCAGG
CCTTGATCAACTACGGCATCGCCTTTCTGCGGAAGCGGTAAGGCCACGTA
GTTGCTGCTGTTGTCTGCTGCTGCCGCTGTTGCCCGCTGTTGCTGCTGCT
GCCTCTGCCGGCTTGACGTTGATGGGCGTTTTGACTTGCGTCCTGCCCTC
GCTGTTTGCGCTTTGTACAATCCGCTGTTGATTCACCCCAGTGGGATAAA
AGCGTCATGAGTTGCTGGCTTAAGCTTTATGGGGGCTGTTCCAGCACCGA
TAGTCGCAACCGAACTGGTACATTAACCGATGGTTTATTTCATTACTCGC
CATGCACACAGCAGTAGGACGTTCCAGAAAGGCCAGTGATGCTGCAAACC
AATAATTTGCAGATATAAATCAGACGATCACAAAGGGCCAACTCGGCTGC
AGTCTTTTTTTGTGGTAAGATATATCTTCAAAGGACCGTGTCTCGATCTG
GGCATTCAGCATATTTATTTCGACACAATGCGGATTTTGTGCGAGTAGTT
CGGACGAGGAAGGATTGGTATATGCCTGCAGCAGTCCCCCTGGAAACGAC
CTTTTCGCGGACTGGACGTACGTGAATAGACTGCTGACGGACAGTTATAC
GTTATACTTGTACGTTAATTAAAATGCGCAAGCCACGCACGCCCCTTGCC
TTCCTCCCTTCCCTCCTCTCTTCCTTGCTTCCTTCTTTCTTTCTTCCGTA
CTCCCGCCTCATGGTTTTCCGGATTTCGTCTCGCGGAAAAATAAAAAAAC
TGACTCGATCCCGTCTCTTTCTTTCTCGCGTTACGCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCC
CTCTCGCGTCGCCTCCTCACCTTCCCCTCCCCAGCCCACCCCCCCCCCCG
CGTCTCNNNNNNNNNNTTTTTCGTTTTTTTCTTCCTCCAAAAAAAAAAAA
AAAACCCCCCCCCCCCCCTTTTTTTTTCCTTTTTTCCCCCCCCCCCCCCC
CCCCCCCCCCGATGTTACTGCTTCTCTGCTGCGTGCTGCGGTTTTGTTTC
GTCTGTTGTGGGCGAATACACCTCGTCGTCCCCAGAAAGTACTCGGTGCT
GCAGCCCCCTTTCTTCATGACGAAGGACGTCATGGCTGGGGTGGCGCAGC
TCGAGCAGTTCGACGAGGAGCTCTACAAGGTATGTCACAGTCGGGTGACG
GCCTCGTTGACTATTGTTGTTTTTTGTCCCCGCGTATTCGATCTCTCTAT
CTATTACCCCCATGAGTACGTGCTAATCCAACACTGGTGCGGTCGATTCC
CGTGGCCACAGGATAACTTGCCCTTAAACGGGTATACTGGAAAAAGGATG
TATTTGTGGAGGAATGTGTGTGGGCCCGCAACATAAAAACCGATATTTAT
GTCGGTTCATTTTGTACATCCTTTTTTTTTTTGGGGTGGGGGGGGATCAT
GACGTTAATCGTAACGGTACAAGTTCGCAAGGCGGAAAACACGTGTGGGT
TGACCAGCGGGGGGTGATTGATTTTTACCTCGTCCTTTGAAGATGTTGTT
TCGCCATCGTTTGTTTGCGTGCGTTTCCTCGGTGCCGCCCTGTACACGCG
TATGTAGTTCATGGCTAAATTACAGGTATCGTACTTACCAGAAGCTTTTC
CCAAATTGCGGTGCTTGTTTGGCTTGCTTGTCGTTTGTTTGGTGGTTTGC
GATGTGTTTCTTTCCCCTTTCATTGCTAAGGTGAGCGTTTGGATTCTTGG
TCTCTTGGAAAGAAAAAAAAAACTCTTTGCTTTAACTTGGTCATTATCTC
TTTCCTTGCTTAAAGTGAGCGCTACACCTACATAGAGGTTTATTTTCTTG
TGTTTTTCGCTCCTTTTTTTTAAGGTGAGCGGCGACGGCGTCGAAGAGAA
GTACCTGATCGCCACCTCGGAGCAGCCCATGTGCGCATTCCACAAGGGGG
AGTGGCTCAAGGAGTCCGAGCTACCGCTTAGGCAAGTGCCCGTCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig2092:1159..4705+

>mRNA_L-elsbetiae_contig2092.6329.1 ID=mRNA_L-elsbetiae_contig2092.6329.1|Name=mRNA_L-elsbetiae_contig2092.6329.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig2092:1159..4705+ (Laminarionema elsbetiae ELsaHSoW15)
AAGGTGATCGACCTGGACAACCAATGGCGGGGATGCAGGGGCCGCATCGA
CGACCTGAACAAGGCCAAGAACCTCTTCCAGAAGGAGGTGACCAAGGCCA
AGAAGGCTGGGGGAGAGGACCCCGAGAACGCCGCCAAGATCAAGGAGACG
GCCAAGGAGATCAAGACCGTGGAGGTCAAGATGGAAGGTGATCGACCTGG
ACAACCAATGGCGGGGATGCAGGGGCCGCATCGACGACCTGAACAAGGCC
AAGAACCTCTTCCAGAAGGAGGTGACCAAGGCCAAGAAGGCTGGGGGAGA
GGACCCCGAGAACGCCGCCAAGATCAAGGAGACGGCCAAGGAGATCAAGA
CCGTGGAGGTCAAGATGGTGGAGCTGGGCACGAAGGTGTCCAAGCTGCTG
CCCAAGATCGGCAACATCGTGGCCGATGACGTGCCGGTATCCAACGACGA
GGAGAAAGACAGCAAGGTGGTCAGCACCTTCGGCCCCAACCCAAAGGGGG
ACCAGTATATGCACCACCACGAGTGGAGCTGGGCACGAAGGTGTCCAAGC
TGCTGCCCAAGATCGGCAACATCGTGGCCGATGACGTGCCGGTATCCAAC
GACGAGGAGAAAGACAGCAAGGTGGTCAGCACCTTCGGCCCCAACCCAAA
GGGGGACCAGTATATGCACCACCACGAGGTGTTGCACCGCATCGGGGGCT
ACGAGCCCGAGCGGGGGGTGGGGGTGGCGGGGCACCGTGCTTACTTCTTG
AGGGACGCCGGGCTGCTCTTGAACCAGGCCTTGATCAACTACGGCATCGC
CTTTCTGCGGAAGCGGTGTTGCACCGCATCGGGGGCTACGAGCCCGAGCG
GGGGGTGGGGGTGGCGGGGCACCGTGCTTACTTCTTGAGGGACGCCGGGC
TGCTCTTGAACCAGGCCTTGATCAACTACGGCATCGCCTTTCTGCGGAAG
CGAAAGTACTCGGTGCTGCAGCCCCCTTTCTTCATGACGAAGGACGTCAT
GGCTGGGGTGGCGCAGCTCGAGCAGTTCGACGAGGAGCTCTACAAGAAAG
TACTCGGTGCTGCAGCCCCCTTTCTTCATGACGAAGGACGTCATGGCTGG
GGTGGCGCAGCTCGAGCAGTTCGACGAGGAGCTCTACAAGGTGAGCGGCG
ACGGCGTCGAAGAGAAGTACCTGATCGCCACCTCGGAGCAGCCCATGTGC
GCATTCCACAAGGGGGAGTGGCTCAAGGAGTCCGAGCTACCGCTTAGGCA
AGTGCCCGTCTGAGTGAGCGGCGACGGCGTCGAAGAGAAGTACCTGATCG
CCACCTCGGAGCAGCCCATGTGCGCATTCCACAAGGGGGAGTGGCTCAAG
GAGTCCGAGCTACCGCTTAGGCAAGTGCCCGTCTGA
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