mRNA_L-elsbetiae_contig209.6326.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig209.6326.1
Unique NamemRNA_L-elsbetiae_contig209.6326.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Match: D7FTF2_ECTSI (Store-operated calcium entry-associated regulatory factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTF2_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 2.340e-78
Identity = 169/361 (46.81%), Postives = 182/361 (50.42%), Query Frame = 1 
Query:    1 TRSRRVNAVQQLICDDNGSIGCPNKKEYLFESATCINEGIGGNMMPSWSCTASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTLTAPTPQ----------------GPFAALLVAFIGLFACCACSKNHK-RRPRGGAPPAYHEVSTLLDTTRRAATAPPAPALLPTAHAVHLDDLEKNASGPRGEAGAVATAHPVGTTASATAAGGAEPSXXXXXXXXXXXXXXXXXXXXXXXXXXXAALASHNRHRKPEDHSLPEEWESKVDPLTGRTYFLNHDTRKTTWTDPRKPSEEQQLLRGNSTRTGANWWTPMNRMRSAPIRGGTAAWQHYGHASELGQSSTYQGATTSGRGDGDSGH 1032
            T  RRV AVQQLICDD+G  GCPNKKEYLFE ATC NEGIG NMMPSWSCTASSLP DTELGSVNVSCEGYTY DDPYVLAGSCAMEYTLT PTPQ                GPFAA ++AF+GLFACCACS N + R PR GA  A   V+               P  +PTA AVHLDD+EKNAS    +AG   TAH VGT   A   GG                                          P DH                                 KPSE + LL G+    G +WW      R  P RGG  A            S+TYQGATTSGRGD D GH
Sbjct:   21 TTHRRVPAVQQLICDDSGPAGCPNKKEYLFEYATCENEGIGENMMPSWSCTASSLPKDTELGSVNVSCEGYTYGDDPYVLAGSCAMEYTLTGPTPQRKGGPLADLRLLQCLYGPFAAFMIAFLGLFACCACSNNKRGRAPRVGAAAAAANVT--------------GPGGIPTATAVHLDDVEKNASS---KAGGSTTAHAVGTPVGA---GG------------------------------------------PVDH---------------------------------KPSESRPLLAGSGATGGGSWWN-----RGRPTRGGLPA-----------NSTTYQGATTSGRGDSDGGH 270
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Match: C7YQU5_FUSV7 (Store-operated calcium entry-associated regulatory factor n=9 Tax=Fusarium solani species complex TaxID=232080 RepID=C7YQU5_FUSV7)

HSP 1 Score: 82.4 bits (202), Expect = 7.300e-14
Identity = 60/164 (36.59%), Postives = 77/164 (46.95%), Query Frame = 1 
Query:    1 TRSRRVNAVQQLICDDNGSIGCPNKKEYLFESATCINEGIG-GNMMPSWSCTASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTLTAPTPQGP-------------------------FAALLVAFIGLF---ACCACSKNH------KRRPRGGAPP 387
            T  RRV+A+ QL C   G+I C     Y  +   C N+G   G+    WSCTA SLP + +LGS +V CEGY Y DDPYVL GSC +EY L A T +G                          F  + V+ +G     ACC   +N+      +RRP G   P
Sbjct:   43 TSHRRVSAIPQLRCASRGAI-CDL---YEIDVMRCTNQGSSWGDEDIEWSCTA-SLPEELKLGSTDVICEGYAYPDDPYVLKGSCGVEYQL-ALTSKGERRYPDIANGGWFNDGRGGIDWGALVFTIIFVSILGWIIYSACCVAQRNNANNNRPRRRPDGWGGP 200
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Match: A0A8H7WLV1_9HELO (Store-operated calcium entry-associated regulatory factor (Fragment) n=1 Tax=Cadophora sp. M221 TaxID=2774352 RepID=A0A8H7WLV1_9HELO)

HSP 1 Score: 79.7 bits (195), Expect = 8.090e-14
Identity = 47/98 (47.96%), Postives = 56/98 (57.14%), Query Frame = 1 
Query:    1 TRSRRVNAVQQLICDDNGSIGCPNKKEYLFESATCINEGIGGNMMP-SWSCTASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTLTAPTPQG 291
            T  RRV+A+ QL C     +G P  K +  E   C N+G   N     WSCTA  +P D +LGS  V+CEGY  RDDPYVL GSC +EY L   T QG
Sbjct:   44 TSHRRVSAIPQLKC-----VG-PACKHHTVERMRCTNQGSSYNEEDIEWSCTA-DMPQDFKLGSTEVTCEGYASRDDPYVLKGSCGVEYRLLL-TEQG 133
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Match: A0A1Y1MMW4_PHOPY (Store-operated calcium entry-associated regulatory factor (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MMW4_PHOPY)

HSP 1 Score: 77.0 bits (188), Expect = 3.390e-13
Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 1 
Query:    1 TRSRRVNAVQQLICDDNGSIGCPNKKEYLFESATCINEG--IGGNMMPSWSCTASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTL 270
            T SRRV+A+ QL C  +  + C     Y  ++  C N+G   GG  +  WSCTA +LP + +LGS +V CEGY   DDPYVL GSC +EY+L
Sbjct:    1 TTSRRVSAIPQLKCTSSREL-C---SLYSIDTMRCTNQGSSYGGEDIE-WSCTA-TLPEELKLGSTDVICEGYASADDPYVLKGSCGVEYSL 86
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Match: A0A8H7TCD9_9HELO (Store-operated calcium entry-associated regulatory factor (Fragment) n=1 Tax=Cadophora malorum TaxID=108018 RepID=A0A8H7TCD9_9HELO)

HSP 1 Score: 76.6 bits (187), Expect = 3.630e-13
Identity = 47/98 (47.96%), Postives = 55/98 (56.12%), Query Frame = 1 
Query:    1 TRSRRVNAVQQLICDDNGSIGCPNKKEYLFESATCINEGIGGNMMP-SWSCTASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTLTAPTPQG 291
            T  RRV+AV QL C     +G P  K +  E   C N+G   N     WSC A  +P+D +LGS  V CEGY  RDDPYVL GSC +EY L   T QG
Sbjct:   44 TSHRRVSAVPQLKC-----VG-PACKHHNVERMRCTNQGSSYNEEDIEWSCVA-DMPSDFKLGSTEVICEGYANRDDPYVLKGSCGVEYRLLL-TEQG 133
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Match: A0A218Z967_9HELO (Store-operated calcium entry-associated regulatory factor n=1 Tax=Marssonina coronariae TaxID=503106 RepID=A0A218Z967_9HELO)

HSP 1 Score: 79.3 bits (194), Expect = 8.180e-13
Identity = 44/91 (48.35%), Postives = 51/91 (56.04%), Query Frame = 1 
Query:    1 TRSRRVNAVQQLICDDNGSIGCPNKKEYLFESATCINEGIGGNMMP-SWSCTASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTL 270
            T  RRV+AV QL C        P  K Y  E   C N+G   N     WSCTA  +P+D +LGS  V CEGY  +DDPYVL GSC +EY L
Sbjct:   45 TSHRRVDAVPQLKCTG------PACKHYKVERMRCTNQGASYNEEDIEWSCTA-EIPDDFKLGSTEVVCEGYASKDDPYVLKGSCGVEYRL 128
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Match: A0A075B4P6_ROZAC (Store-operated calcium entry-associated regulatory factor n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B4P6_ROZAC)

HSP 1 Score: 78.2 bits (191), Expect = 1.100e-12
Identity = 63/187 (33.69%), Postives = 84/187 (44.92%), Query Frame = 1 
Query:    1 TRSRRVNAVQQLICDDNGSIGCPNKKEYLFESATCINEGIGGNMMPSWSCTASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTLT--------APTPQGP----FAALLVAFIGLFACCACSKNHKRR-------PRGGAPPAYHEVSTLLDTTRRAATAPPAPALLPTAHAVHLDDLEKN 504
            T+S R  ++ QL C  N         +Y      C N G  GN +  WSC A +L +  +  S++VSCEGY+Y DDPYVL GSC +EYTL           +  GP      A+++ F+ LF    C K   R        P    PP    +S L+      A+APP   L P  HA   D   +N
Sbjct:   25 TKSSRTKSIPQLKCVGNSIC------KYSPSVVQCKNVGFDGNDVQ-WSCNA-NLDDRVKFDSLSVSCEGYSYSDDPYVLVGSCGLEYTLAYKDSTTRKRSSTSGPEVWIIPAVIIGFL-LFGIYKCIKGTNRGYNEYHTVPDYQPPPPCKLLSNLIQD----ASAPP---LYPNVHAYTSDSPGRN 195
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Match: C8V0V9_EMENI (Store-operated calcium entry-associated regulatory factor n=2 Tax=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) TaxID=227321 RepID=C8V0V9_EMENI)

HSP 1 Score: 78.2 bits (191), Expect = 2.110e-12
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 1 
Query:    1 TRSRRVNAVQQLICDDNGSIGCPNKK---EYLFESATCINEGIGGNMMP-SWSCTASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTL 270
            TR+RRV+ + QL C     +G P+K+    Y  +S  CIN+G G +     W+CTA SLP + +LGS +V CEGY   DDPYVL GSC +EY L
Sbjct:   52 TRARRVSPIPQLKC-----VG-PSKRICNMYEIDSMRCINDGYGYDEEDVQWTCTA-SLPGEFKLGSTDVVCEGYRNADDPYVLKGSCGVEYRL 138
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Match: A0A2V1BJQ6_9HELO (Store-operated calcium entry-associated regulatory factor (Fragment) n=1 Tax=Cadophora sp. DSE1049 TaxID=1485229 RepID=A0A2V1BJQ6_9HELO)

HSP 1 Score: 75.5 bits (184), Expect = 2.540e-12
Identity = 45/98 (45.92%), Postives = 55/98 (56.12%), Query Frame = 1 
Query:    1 TRSRRVNAVQQLICDDNGSIGCPNKKEYLFESATCINEGIGGNMMP-SWSCTASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTLTAPTPQG 291
            T  RRV+A+ QL C     +G P  K +  +   C N+G   N     WSC A  +P+D +LGS  V CEGY  RDDPYVL GSC +EY L   T QG
Sbjct:   45 TSHRRVSAIPQLKC-----VG-PACKHHNVDRMRCTNQGASYNEEDIEWSCVA-DMPSDFKLGSTEVICEGYANRDDPYVLKGSCGVEYRLLL-TEQG 134
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Match: A0A0U5C2H8_ASPCI (Store-operated calcium entry-associated regulatory factor n=1 Tax=Aspergillus calidoustus TaxID=454130 RepID=A0A0U5C2H8_ASPCI)

HSP 1 Score: 77.8 bits (190), Expect = 3.100e-12
Identity = 44/91 (48.35%), Postives = 53/91 (58.24%), Query Frame = 1 
Query:    1 TRSRRVNAVQQLICDDNGSIGCPNKKEYLFESATCINEGIGGNMMP-SWSCTASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTL 270
            T SRRV+ + QL C       C     Y  ES  CINEG G +     W+CTA SLP + +LGS +V CEGY   DDP+VL GSC +EY L
Sbjct:   52 TSSRRVSPIPQLKCTGPSKRICDM---YEIESMRCINEGYGYDEEDVQWTCTA-SLPGEFKLGSTDVVCEGYRAADDPWVLKGSCGVEYRL 138
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig209.6326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTF2_ECTSI2.340e-7846.81Store-operated calcium entry-associated regulatory... [more]
C7YQU5_FUSV77.300e-1436.59Store-operated calcium entry-associated regulatory... [more]
A0A8H7WLV1_9HELO8.090e-1447.96Store-operated calcium entry-associated regulatory... [more]
A0A1Y1MMW4_PHOPY3.390e-1346.74Store-operated calcium entry-associated regulatory... [more]
A0A8H7TCD9_9HELO3.630e-1347.96Store-operated calcium entry-associated regulatory... [more]
A0A218Z967_9HELO8.180e-1348.35Store-operated calcium entry-associated regulatory... [more]
A0A075B4P6_ROZAC1.100e-1233.69Store-operated calcium entry-associated regulatory... [more]
C8V0V9_EMENI2.110e-1247.87Store-operated calcium entry-associated regulatory... [more]
A0A2V1BJQ6_9HELO2.540e-1245.92Store-operated calcium entry-associated regulatory... [more]
A0A0U5C2H8_ASPCI3.100e-1248.35Store-operated calcium entry-associated regulatory... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig209contigL-elsbetiae_contig209:27876..31590 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.4
Seed ortholog evalue1.3e-22
Seed eggNOG ortholog2880.D7FTI2
Preferred nameTMEM66
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0008150,GO:0010959,GO:0012505,GO:0016020,GO:0016021,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032879,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0051049,GO:0051924,GO:0065007,GO:0098827,GO:2001256
EggNOG free text desc.Store-operated calcium entry-associated regulatory factor
EggNOG OGs28KQW@1,2QT6Y@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF1183, TMEM66
Ec32 orthologEc-21_001110.1
Exons7
Model size1269
Cds size1269
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815858.2841094-CDS-L-elsbetiae_contig209:27875..279921622815858.2841094-CDS-L-elsbetiae_contig209:27875..27992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 27876..27992 +
1691683150.3875759-CDS-L-elsbetiae_contig209:27875..279921691683150.3875759-CDS-L-elsbetiae_contig209:27875..27992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 27876..27992 +
1622815858.2955213-CDS-L-elsbetiae_contig209:28523..286931622815858.2955213-CDS-L-elsbetiae_contig209:28523..28693Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 28524..28693 +
1691683150.403038-CDS-L-elsbetiae_contig209:28523..286931691683150.403038-CDS-L-elsbetiae_contig209:28523..28693Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 28524..28693 +
1622815858.3080637-CDS-L-elsbetiae_contig209:28981..290481622815858.3080637-CDS-L-elsbetiae_contig209:28981..29048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 28982..29048 +
1691683150.4173963-CDS-L-elsbetiae_contig209:28981..290481691683150.4173963-CDS-L-elsbetiae_contig209:28981..29048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 28982..29048 +
1622815858.322507-CDS-L-elsbetiae_contig209:29592..299761622815858.322507-CDS-L-elsbetiae_contig209:29592..29976Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 29593..29976 +
1691683150.4299676-CDS-L-elsbetiae_contig209:29592..299761691683150.4299676-CDS-L-elsbetiae_contig209:29592..29976Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 29593..29976 +
1622815858.3370233-CDS-L-elsbetiae_contig209:30801..308801622815858.3370233-CDS-L-elsbetiae_contig209:30801..30880Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 30802..30880 +
1691683150.443064-CDS-L-elsbetiae_contig209:30801..308801691683150.443064-CDS-L-elsbetiae_contig209:30801..30880Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 30802..30880 +
1622815858.351341-CDS-L-elsbetiae_contig209:31105..315111622815858.351341-CDS-L-elsbetiae_contig209:31105..31511Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 31106..31511 +
1691683150.4536116-CDS-L-elsbetiae_contig209:31105..315111691683150.4536116-CDS-L-elsbetiae_contig209:31105..31511Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 31106..31511 +
1622815858.3614216-CDS-L-elsbetiae_contig209:31544..315901622815858.3614216-CDS-L-elsbetiae_contig209:31544..31590Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 31545..31590 +
1691683150.464137-CDS-L-elsbetiae_contig209:31544..315901691683150.464137-CDS-L-elsbetiae_contig209:31544..31590Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig209 31545..31590 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig209.6326.1prot_L-elsbetiae_contig209.6326.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig209 27876..31590 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig209.6326.1

>prot_L-elsbetiae_contig209.6326.1 ID=prot_L-elsbetiae_contig209.6326.1|Name=mRNA_L-elsbetiae_contig209.6326.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=423bp
TRSRRVNAVQQLICDDNGSIGCPNKKEYLFESATCINEGIGGNMMPSWSC
TASSLPNDTELGSVNVSCEGYTYRDDPYVLAGSCAMEYTLTAPTPQGPFA
ALLVAFIGLFACCACSKNHKRRPRGGAPPAYHEVSTLLDTTRRAATAPPA
PALLPTAHAVHLDDLEKNASGPRGEAGAVATAHPVGTTASATAAGGAEPS
GASSTSLAAGAAAGAAATAAAAAAAGVAALASHNRHRKPEDHSLPEEWES
KVDPLTGRTYFLNHDTRKTTWTDPRKPSEEQQLLRGNSTRTGANWWTPMN
RMRSAPIRGGTAAWQHYGHASELGQSSTYQGATTSGRGDGDSGHASTTHG
GTTGRGNDHTSTAHGGTSGRDGGGGGGGWGSLFGGGGGGDHSSTAHGGTT
DRGGGGGGGFHSSSASGGTSGR*
back to top

mRNA from alignment at L-elsbetiae_contig209:27876..31590+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig209.6326.1 ID=mRNA_L-elsbetiae_contig209.6326.1|Name=mRNA_L-elsbetiae_contig209.6326.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3715bp|location=Sequence derived from alignment at L-elsbetiae_contig209:27876..31590+ (Laminarionema elsbetiae ELsaHSoW15)
ACACGCAGTCGCCGCGTCAACGCAGTCCAGCAGCTGATCTGCGACGACAA
CGGGTCCATTGGGTGTCCGAATAAGAAGGAGTACCTTTTCGAGAGCGCGA
CATGCATCAATGAAGGGGTGAGCGTGCCGCAACGGGATACATGCGTCGTG
GTTCGGTTGTTGGAGAAAAAATCTTCAGGAAGCGTTCCCCCTTGCTCCCG
GCAAGCTCCTGATGCACACAAATGGGGTTGTCGTAGCGCGGGCTGGGCGA
CGATCTAGCGATCTATGTAGGGGCCGTGCGCTGCAGCATAGCAGGTTGCC
AACGAGAGGCACCATATACCCTCGCTTCTATACAAGTGCGAGCGGAGCTG
TCGTCGTCAGTCCCTTCTCCCCAGGTCCACCCGTAGGGCGGCCGGCGTAC
ACGACACGAGCATCTCGCCCTCGCGGACGACCGACGGTTGCGCCATCAAG
TCAGACCCGTGACACTGCCTCTGGTCGTGGGTCGTTATAAATGACGCTCC
GCGGATGTTAAAGCACACGCAGTACCTTCTTTGCCGCTTAATCTTGCAGT
GTTCCCCCGCCTTCCCGCCTTCGTCCCCGTTCCCCGCTCTTTCTGGACTA
TGCACGTGTTCACGCTACATATCTGCATATGTTTTGTGATTTGGACAGAT
CGGAGGGAACATGATGCCGTCTTGGTCGTGTACGGCTTCCAGCCTCCCCA
ACGACACGGAGCTGGGCAGCGTGAACGTGTCCTGCGAGGGCTATACCTAT
CGCGACGATCCGTACGTTCTCGCCGGCAGCTGCGCGATGGAGTACACGCT
AACCGCACCCACGCCGCAGTAAGTGATGGATGGCTGTTGACGCCGAGGTT
GGTGTTGAATTGATTGCTTCAGCTGTTAAAAGTCGTTTTCGAGATCCACA
GATCGGCGCCCTTCGAAGGAACACAGTAACGAAACACATAAAATTGACCG
AACTTGCTGAAATTGCGGACGTGACCATTTCTCTGAATTTCGGAGGCGGG
CATCGTCTGACTCCCGCCCCGTCTTGCGTCTTGTGCTTACGCTCTCCCTC
TTCCCTCTCTTGTTGTTGTTCCTTCTGGTTCTTCGTTTGCTTGCGTGCTT
TTTCAGGGGTCCGTTCGCGGCCTTGCTCGTCGCATTTATCGGGCTCTTCG
CTTGCTGCGCATGCTCGAAGAATGTGCGTTCGATTCGAAACACGTAACTC
CAGATACCGGCATGGTTTCTTCTTTATTGAATGGCCCCAGTTCGAAAGTG
TTCGGTTGCGCCAGAAGTAGCTTATGGCTCTTTGCATGTAGCCGGTAGTC
GCGTAGTCTCTTTCACACTTCACCATGCTCTCCACGAATTCCAAATAAGT
CAAGCTTGAGAGGGTATCAAAACGAAACGAAGAACGAAAATTCGACAATC
TTGCATGCCGACGCAGTCATGCGCGTACGTGGTAGTGCACCACTCTAAGG
CAGTAGCGAACGTCGAAACCTTTCGGATCGAGCAGGAGTTTTTCTCGCCA
CACAAAAAACGAAGGGTTACTACATGCATATGTGCGTTGTTGCGAAAGAA
GGGGGCTGGGCGCCCTGCGGCTTCAGCCAAAGCTCAGCGTCTTGGCGTTC
ACCCCGGGAGACGTCCGCATTTTTCTCTCGAGTGCACGCACGGCACCCCC
TCCCGCGCGGACATTCACACCCCTGACCGTCCCTACGAACGGTTCTGTTT
TGTTTTTACCACCGCAGCACAAGAGGCGGCCGAGGGGCGGGGCCCCGCCT
GCGTACCACGAGGTGAGCACCCTGCTGGACACAACCAGGCGGGCAGCGAC
GGCCCCCCCAGCGCCAGCCCTCCTCCCCACGGCACACGCCGTGCACCTAG
ACGACCTGGAAAAGAACGCCTCTGGCCCTCGCGGAGAGGCGGGGGCGGTC
GCCACCGCCCACCCTGTCGGAACTACGGCAAGCGCGACAGCGGCCGGTGG
CGCTGAGCCCTCGGGAGCGTCGTCGACTTCTTTGGCGGCGGGGGCGGCGG
CCGGGGCGGCAGCGACTGCTGCTGCTGCTGCTGCCGCCGGCGTCGCAGCG
CTGGCAAGCCACAACAGACATCGCAAGCCGGAGGATCACTCCTTGCCGGA
GGTGGGTTCCGTAGGTGACACAAGATACCATACCCCCTGGACAGAATTTT
AGAGCTCCATTACTCCGCAACGAAGAGGGTGCCAGCACCAAACGACACAT
TTTCGGACAGCCTTTGACCAGATATTTCCAACGCCACCCTTTTTGGCACT
GGCACTCTTCTTGCGGGGGAGGAATCGAGCTTTGAAAATCTGTCCAGGGG
GTAGGGTATCTTGTGTCACCTACGGTAGATGGGTCCCAGTTTTGGTGTGG
GCTTTCGCCATTTGCACGTAGATGCGCACATGCGAGGAAAGCGATGGTGC
ACTACAGCAGTATATAATACCTGAACGCGTGTTCGTGTTTTGATCGACCT
TGATATCTCACTTGGACCCTGGTGGGGTCGGTTCGACAGCTTTGACACAC
ACCGTGAAGCCTTGTGGTTGAAACGTGCAGATGGCGCCGCAGAAAAAAAG
ACACTGGCATTCAAAGCAGAGAATCACCGCCCAAGCTGGTGCTGCCCGGG
AGCAGATAAACCGGGGCTGGTAGCGTGTTTCTCCCTCTCATGTATCGCCA
GACGACGTCATTGCGAAGGGGGTCGGGAGCAAATCTATGATGCGGTCAGG
AGGCGGCCAGGTGCTGATTGTTTGCTTGTGCCGCCGGCAGGCTTTGTTTA
CGTGTTGATCGGCTTCAGCAACGATGAATAAAGCTCCCACAAAATCTTTT
GGCGTTGACATCCGGTGCTTCGTCTTCCTGAACGACCTTCGATTCCGAGA
TAATATTAACCTGACCGATTTTTGCCTCTCTAAAACCACGAAACCGCCCT
CATCTGGCCGTGGTCACCACCGCCAGGAGTGGGAGTCAAAGGTGGACCCT
CTCACGGGAAGGACCTACTTCCTGAACCACGACACGAGGAAGACGACCTG
GACAGGTGAGTTTCTTGCGAGTTTTTTCCCTCGCGGCCGATCGGCAACGT
TGCCTTCGCATTCTCGGGGCAAAAGCCGCACTGCCCTTTTCCCCTGCCCA
CCAATCTGACGCTCCCGACATGAACACGTGCAACAAGCTTGACACGCATG
TAGGCCACACGCAACGATATTTTCCCTTCCGACTCATCCCTCCTCAGCCC
CAACACTCCCGCCCCCCAAACATCCGACAGATCCACGCAAGCCCAGCGAA
GAGCAGCAGCTGCTCCGCGGCAACAGCACCCGCACCGGTGCCAATTGGTG
GACTCCCATGAACCGCATGCGCTCCGCTCCAATCCGTGGCGGGACAGCTG
CTTGGCAGCACTACGGCCACGCGAGCGAACTCGGGCAATCCAGCACCTAC
CAGGGAGCAACCACATCCGGTAGGGGCGACGGTGACAGCGGCCACGCCAG
TACTACCCACGGAGGAACCACGGGGCGGGGCAACGACCACACTAGCACCG
CCCACGGTGGCACCTCTGGCCGGGACGGTGGTGGCGGCGGCGGCGGGTGG
GGCAGTCTGTTCGGCGGGGGAGGGGGCGGTGATCACTCGAGCACCGCTCA
CGGCGGCACGACGGACAGGGGAGGCGGCGGGGGGGGGTGGGGCGGCGGCG
GCGGCGGCGGCGGCGGCAGCGGCTTCCATTCTAGTAGCGCCTCTGGGGGC
ACATCCGGCAGATAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig209:27876..31590+

>mRNA_L-elsbetiae_contig209.6326.1 ID=mRNA_L-elsbetiae_contig209.6326.1|Name=mRNA_L-elsbetiae_contig209.6326.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2538bp|location=Sequence derived from alignment at L-elsbetiae_contig209:27876..31590+ (Laminarionema elsbetiae ELsaHSoW15)
ACACGCAGTCGCCGCGTCAACGCAGTCCAGCAGCTGATCTGCGACGACAA
CGGGTCCATTGGGTGTCCGAATAAGAAGGAGTACCTTTTCGAGAGCGCGA
CATGCATCAATGAAGGGACACGCAGTCGCCGCGTCAACGCAGTCCAGCAG
CTGATCTGCGACGACAACGGGTCCATTGGGTGTCCGAATAAGAAGGAGTA
CCTTTTCGAGAGCGCGACATGCATCAATGAAGGGATCGGAGGGAACATGA
TGCCGTCTTGGTCGTGTACGGCTTCCAGCCTCCCCAACGACACGGAGCTG
GGCAGCGTGAACGTGTCCTGCGAGGGCTATACCTATCGCGACGATCCGTA
CGTTCTCGCCGGCAGCTGCGCGATGGAGTACACGCTAACCGCACCCACGC
CGCAATCGGAGGGAACATGATGCCGTCTTGGTCGTGTACGGCTTCCAGCC
TCCCCAACGACACGGAGCTGGGCAGCGTGAACGTGTCCTGCGAGGGCTAT
ACCTATCGCGACGATCCGTACGTTCTCGCCGGCAGCTGCGCGATGGAGTA
CACGCTAACCGCACCCACGCCGCAGGGTCCGTTCGCGGCCTTGCTCGTCG
CATTTATCGGGCTCTTCGCTTGCTGCGCATGCTCGAAGAATGGGTCCGTT
CGCGGCCTTGCTCGTCGCATTTATCGGGCTCTTCGCTTGCTGCGCATGCT
CGAAGAATCACAAGAGGCGGCCGAGGGGCGGGGCCCCGCCTGCGTACCAC
GAGGTGAGCACCCTGCTGGACACAACCAGGCGGGCAGCGACGGCCCCCCC
AGCGCCAGCCCTCCTCCCCACGGCACACGCCGTGCACCTAGACGACCTGG
AAAAGAACGCCTCTGGCCCTCGCGGAGAGGCGGGGGCGGTCGCCACCGCC
CACCCTGTCGGAACTACGGCAAGCGCGACAGCGGCCGGTGGCGCTGAGCC
CTCGGGAGCGTCGTCGACTTCTTTGGCGGCGGGGGCGGCGGCCGGGGCGG
CAGCGACTGCTGCTGCTGCTGCTGCCGCCGGCGTCGCAGCGCTGGCAAGC
CACAACAGACATCGCAAGCCGGAGGATCACTCCTTGCCGGAGCACAAGAG
GCGGCCGAGGGGCGGGGCCCCGCCTGCGTACCACGAGGTGAGCACCCTGC
TGGACACAACCAGGCGGGCAGCGACGGCCCCCCCAGCGCCAGCCCTCCTC
CCCACGGCACACGCCGTGCACCTAGACGACCTGGAAAAGAACGCCTCTGG
CCCTCGCGGAGAGGCGGGGGCGGTCGCCACCGCCCACCCTGTCGGAACTA
CGGCAAGCGCGACAGCGGCCGGTGGCGCTGAGCCCTCGGGAGCGTCGTCG
ACTTCTTTGGCGGCGGGGGCGGCGGCCGGGGCGGCAGCGACTGCTGCTGC
TGCTGCTGCCGCCGGCGTCGCAGCGCTGGCAAGCCACAACAGACATCGCA
AGCCGGAGGATCACTCCTTGCCGGAGGAGTGGGAGTCAAAGGTGGACCCT
CTCACGGGAAGGACCTACTTCCTGAACCACGACACGAGGAAGACGACCTG
GACAGGAGTGGGAGTCAAAGGTGGACCCTCTCACGGGAAGGACCTACTTC
CTGAACCACGACACGAGGAAGACGACCTGGACAGATCCACGCAAGCCCAG
CGAAGAGCAGCAGCTGCTCCGCGGCAACAGCACCCGCACCGGTGCCAATT
GGTGGACTCCCATGAACCGCATGCGCTCCGCTCCAATCCGTGGCGGGACA
GCTGCTTGGCAGCACTACGGCCACGCGAGCGAACTCGGGCAATCCAGCAC
CTACCAGGGAGCAACCACATCCGGTAGGGGCGACGGTGACAGCGGCCACG
CCAGTACTACCCACGGAGGAACCACGGGGCGGGGCAACGACCACACTAGC
ACCGCCCACGGTGGCACCTCTGGCCGGGACGGTGGTGGCGGCGGCGGCGG
GTGGGGCAGTCTGTTCGGCGGGGGAGGGGGCGGTGATCACTCGAGCACCG
CTCACGGCGGCACGACGGACAGGGGAGGCGGCGGGGGGGGATCCACGCAA
GCCCAGCGAAGAGCAGCAGCTGCTCCGCGGCAACAGCACCCGCACCGGTG
CCAATTGGTGGACTCCCATGAACCGCATGCGCTCCGCTCCAATCCGTGGC
GGGACAGCTGCTTGGCAGCACTACGGCCACGCGAGCGAACTCGGGCAATC
CAGCACCTACCAGGGAGCAACCACATCCGGTAGGGGCGACGGTGACAGCG
GCCACGCCAGTACTACCCACGGAGGAACCACGGGGCGGGGCAACGACCAC
ACTAGCACCGCCCACGGTGGCACCTCTGGCCGGGACGGTGGTGGCGGCGG
CGGCGGGTGGGGCAGTCTGTTCGGCGGGGGAGGGGGCGGTGATCACTCGA
GCACCGCTCACGGCGGCACGACGGACAGGGGAGGCGGCGGGGGGGGCGGC
TTCCATTCTAGTAGCGCCTCTGGGGGCACATCCGGCAGATAACGGCTTCC
ATTCTAGTAGCGCCTCTGGGGGCACATCCGGCAGATAA
back to top