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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 3 |
Model size | 1885 |
Cds size | 1323 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815854.0038853-UTR-L-elsbetiae_contig2079:16034..16120 | 1622815854.0038853-UTR-L-elsbetiae_contig2079:16034..16120 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2079 16035..16120 + |
1691683147.5410144-UTR-L-elsbetiae_contig2079:16034..16120 | 1691683147.5410144-UTR-L-elsbetiae_contig2079:16034..16120 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2079 16035..16120 + |
1622815854.0780766-UTR-L-elsbetiae_contig2079:21353..21829 | 1622815854.0780766-UTR-L-elsbetiae_contig2079:21353..21829 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2079 21354..21829 + |
1691683147.5833635-UTR-L-elsbetiae_contig2079:21353..21829 | 1691683147.5833635-UTR-L-elsbetiae_contig2079:21353..21829 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2079 21354..21829 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815854.0199053-CDS-L-elsbetiae_contig2079:16120..16618 | 1622815854.0199053-CDS-L-elsbetiae_contig2079:16120..16618 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2079 16121..16618 + |
1691683147.5524263-CDS-L-elsbetiae_contig2079:16120..16618 | 1691683147.5524263-CDS-L-elsbetiae_contig2079:16120..16618 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2079 16121..16618 + |
1622815854.043081-CDS-L-elsbetiae_contig2079:16729..17471 | 1622815854.043081-CDS-L-elsbetiae_contig2079:16729..17471 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2079 16730..17471 + |
1691683147.5624962-CDS-L-elsbetiae_contig2079:16729..17471 | 1691683147.5624962-CDS-L-elsbetiae_contig2079:16729..17471 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2079 16730..17471 + |
1622815854.0624855-CDS-L-elsbetiae_contig2079:21270..21353 | 1622815854.0624855-CDS-L-elsbetiae_contig2079:21270..21353 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2079 21271..21353 + |
1691683147.5730267-CDS-L-elsbetiae_contig2079:21270..21353 | 1691683147.5730267-CDS-L-elsbetiae_contig2079:21270..21353 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2079 21271..21353 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2079.6278.1 >prot_L-elsbetiae_contig2079.6278.1 ID=prot_L-elsbetiae_contig2079.6278.1|Name=mRNA_L-elsbetiae_contig2079.6278.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=441bp
MPQKCSRHGCTKFSSYGKAGSKAEYCRDHAEDGMLNVTKKTCTHHGCTKV PSYGKAGGKVEYCRDHAEDGMLDVKNKTCTHHGCTKQPSYGKAGGKVEYC RDHAKDGMLNVKDKTCTHHGCTKRQSYGKAGGKAEYCRDHAKDGMLNVKD KTCTHHGCTKRQSYGKAGGKAEYCRDHAKDGMLNVKGKTCTHHGCTKQPS YGKAGGNKAEYCRDHAEDGMLNVKNKRCTHHGCTKQPSYGKAGGNKAEYC RDHAEDGMLDVINKRCAIPGCTTRASYDDKNAGTREFCARHAREGMVCLS GRSRGDSKTSDSTDDSIGARGGGTASRAGSGGKPRSHVPSPPPTAEACSG RSMETNKRVRRSAGGGDLHPVRVKREGAVSRLADDEETRACPEPTGVVKM EDLYVSCKAEPAEGEAGQARKKRRKPTGGGSRDAPDIALL* back to topmRNA from alignment at L-elsbetiae_contig2079:16035..21829+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig2079.6278.1 ID=mRNA_L-elsbetiae_contig2079.6278.1|Name=mRNA_L-elsbetiae_contig2079.6278.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5795bp|location=Sequence derived from alignment at L-elsbetiae_contig2079:16035..21829+ (Laminarionema elsbetiae ELsaHSoW15) CTCTCGTGTGGCACACTTGGAGGCTCTTGTCGGGTAGCTGTGGTTCATTC
TTTATCTCTCTTTTTAAAGGACTATCTAGAGAAAGGATGCCTCAGAAGTG
TTCTCGCCACGGCTGCACCAAGTTCTCGTCATACGGCAAGGCCGGCAGCA
AGGCGGAGTACTGCCGTGACCATGCTGAGGACGGGATGCTGAACGTGACG
AAGAAGACATGCACCCACCACGGCTGTACCAAGGTGCCGTCATACGGCAA
GGCTGGCGGCAAGGTGGAGTACTGCCGTGACCATGCTGAGGACGGGATGC
TGGACGTGAAGAACAAGACATGCACCCACCACGGCTGTACCAAGCAGCCG
TCGTACGGCAAGGCCGGCGGCAAGGTGGAGTACTGCCGTGACCATGCCAA
GGACGGGATGCTGAACGTGAAGGATAAGACATGCACCCACCACGGCTGTA
CTAAGCGGCAGTCATACGGCAAGGCTGGCGGCAAGGCGGAGTACTGCCGT
GACCATGCCAAGGACGGGATGCTGAACGTGAAGGATAAAACATGCACCCA
CCACGGGTGTACCAAGCGGCAGTCATACGGCAAGGCCGGCGGCAAGGCGG
AGTACTGCCGTGACCATGCCGAAGACGGGATGCTGGACGTGAAGAACAAG
ACATGCACCCACCACGGCTGTACCAAGAAGCCGTCGTACGGCAAGGCCGG
CGGCAAGGCGGAGTACTGCCGTGACCATGCCAAGGACGGGATGCTGAACG
TGAAGGGTAAGACATGCACCCACCACGGCTGTACCAAGCAGCCGTCATAT
GGCAAGGCTGGCGGTAATAAGGCGGAGTACTGTCGTGATCATGCCGAGGA
CGGGATGCTGAACGTCAAGAACAAGAGATGCACCCACCACGGCTGTACCA
AGCAGCCGTCATATGGCAAGGCTGGCGGCAATAAGGCGGAGTACTGCCGT
GACCATGCCGAGGACGGGATGCTGGACGTCATCAACAAGAGATGTGCCAT
TCCAGGGTGCACCACAAGGGCCAGCTACGACGACAAAAATGCTGGCACCC
GGGAGTTTTGCGCACGACATGCAAGAGAAGGCATGGTCTGTCTTTCTGGC
CGATCCAGGGGGGACAGCAAAACAAGTGACAGTACCGATGATTCGATCGG
AGCAAGGGGCGGTGGCACCGCTAGCCGTGCTGGCTCCGGTGGAAAGCCGA
GGAGTCACGTTCCCTCGCCCCCCCCAACGGCGGAAGCTTGCTCAGGAAGG
AGCATGGAGACCAACAAGCGAGTCCGCCGGAGTGCTGGCGGTGGGGACTT
ACACCCGGTTCGGGTGAAAAGAGAGGGGGCTGTCAGCAGGTTGGCCGACG
ACGAGGAAACTAGAGCATGTCCAGAGCCTACGGGTGTGGTGAAGATGGAA
GACCTGTATGTTTCCTGCAAGGCGGAACCCGCAGAAGGTGCGGGTGCGAT
TCAAACGTGTCTTAGTTTATCTAGGCGGCCATCGTGATATCATGACGTGC
TCGTACCGGTGTTTGCATGTAACATCTGTACGTGTGTGAGTGTGTAGCTG
GAGATGTGTTCGACTGGATGCGAATATGGACACCTTGCGTGTATTTAATG
TTGGAACACTTTTAAGCAAGCCTCACCTCAGCTGCCAGCAATACCTGTTC
TTTTTTCGCCAAGGTGTTCACTATATTGTTTTCCACGCCAATCTAGAGAG
CGGGTCTAGATAATAAAAACGATTCGATGAAACAGCGGGTGGGTGTACTC
AACCCGCTTTTAAAACTTAAGAATGGGATCTCCAAGTCATCCTCATCCTG
ATTCATTTCTAGTGGTGCCTTAAGCCGGCTGTCTCGAGAAAGCAGAATCG
GCTTCGACGAAACTCTCTTGGGCATAAGTTTATCAAGATATGTATCTGCC
CGTGCTTGTCGTGGCTAAAACTAGTTCTACAACAACACTCCCCGTCCGCC
AAAGTGTTTTAGGGCGTAACCGCTTGATTCCTCGAAAACAACACATGAAA
TCGGCCTTGTGATGGCCGTAGCTTTCGAGGAGATGCCTTGACCAACGGAC
GGCTTTAGTTCCTGTACGTACAGCAGAACTTTGCGTCTATGTTTTCTTGT
ACGTTGGGTGCATTCGCTTGGTAGTATAGTAGACTGGTGCTACCGGGGTT
CGTGCCTTTTCAATTATTTGGAAATAAATCAGGAAATCAAAGAAACAACC
TCGCCACAAGAGACGGGACTTCGTGGTGAATTAACAATTCAATATCTACA
ACGGTGATGTAACATTGGTCCGGCGGAGTAGAAAAACACCTAAGATATTA
TAAACCCTCCCGCATAACACTCTCTGCCAGGTCAACCAGCGAATATTCCG
GGGAGAAGCCCACCGTAATTACGTGATGTTTGTGTCTTCCTCTATGTATG
ATAGGATACGTCGTATGGTCACACTACAGTCAAGTGCTGGTTTAAATGTT
GTTGTGGTTGCTGCTGCCAAGAAGTGTATCTATCAGTAATTTCATGTAAG
GTAGTGGAAGGACGGAGATTAAGATGATGTGAGAGGGGTGTGGTATCTTA
CGGCATGTGTTCGTGTATGCAGGAGAAGTGTTTTGAAGAGAGATCAGGAA
ACTAAAGAAAGGACCTCCGCACAAGAGACGGGGTTTTGTGAGTGGAGAAA
GCCCACCAGGACATCGACCTCACCTTACATACGATTGTGGAAACTGTGTG
TAGAGTGTGGTGGGTTCAAAAGGACATATGTACCTCCCCAAGAACGCTTA
TGAAGGGGTGTGCTATCAAACGTATAGGATGCAAAATAACCACCAGATAC
TAGTAAATGTTACACTTATATGAGTCGTGCGAGCTCATACCTTCAGTAGT
CTTATCTGCGATTGCTGTGACGTGAAGAAGCATGTCGGTCACACACCAAC
GCCACAGCGCGACCCCTTTCCCTCCGATTCCCCCCTGCACTACATTAAAA
TGAATGTTCCAAAGTAACTAGATACGTTGGTGCGTACAGAAACACACACA
TTTTGCGAGAGAGATTTTCGTGCGCGCGCACACACACACCTCCTGTTACC
TGCCGGCCTTTTCGCACGATACCTTGCATGTGCGTCGACAGCCCTACCCA
CGCTCTTTGTCCGGAGCTTGTTCGTTGCCTCTCCTCGATGTTTTTACGCC
GATATTATCGAGCAAAAGGGATGTTTGATCGAAAACGTGAAAAAACGAGA
AGAAGAAAACGTCCATTCGACATGCGCCTGAGGAGACACAACACGCTGAT
AACAATTTTGGAGTCAAAGTTGAGGAGAGGTACACCGACGAGCTCTGTAC
AAAAAGCGCGGGTAGAGCTGTCGACGCGTCTGCTCAGTTTTGTCTGGAAA
GGCCGAGAGGCAGAGGAGGTGTGCGTCTGCGTGTGTGCATGTGTGAAAAG
AAACAAGAGCTGTTGCTGTAGATTTTTTCCCCCTCTCTCAGCTCGGACAC
CCGCCCGCGCTTTCGGAGCTATTGCCCTCTTGGTGTGAGCACCACGCCCC
CGCATGATGGCATCCTCTCTCGCTGCTGTCTCTATCCTGCGGTGTGCCTT
CTCTCGCCAGGAAGTGTGTGCGTGTTGCCTCTCCTCACTGCTGTGTATCT
GCCTTGAAAATAGAGGAAGGGGACGCTGGGAGACCACCCCCCAAAGCAGG
GAGTTCGAGGGCTGAATTTGGCTGTTTGCTCTCTTCGATGCCCGCTGCCA
CGCTCGTCTCTTGAGCATTGCCACAAAAACACAGACCCATAAGGTCGGCT
GTATTTCAGTGCATCCACCGAAACTGTCACATCCCTTCTCAGCTCCTTGT
GTCGATCGCATTTCCGAAAACAGGGGGTAATTATGGCTTCCGACATACTA
ACTCAGACGCCGCTGGACAATTTTTCGCACCCCGAATAAGATCCCCTCCC
CCCCCACCCGATATCTAGAGTTTTGTTTTCGCTGTAAAAGTACCGGAAAA
AAAGGCTCGCTTCGCTCGCGCGCCTCATTACAAGCAGATTTCGATTCAAC
AGGTTGGTAGGAGAAGGTGGACACACGAGCAGTTAGTTCACCACGACTAG
AACATGTGTGGTTTGTCAATGTATCAAGATTCGACGTGAGTGTGCACGCG
TGGGTCTTGGTGACCATGGAGATATGTGACCCGACGAGAAATTGAACTTC
CCTGTCATGTACATACTGTGATGTCGTGCAGCAGTCCTCACGCGCGTTAC
GTGACCTTGTTCCTCATAGTATACTCAGCAGAAAGTGGTTGGTAGTACGT
AAGCAGTTATCCTCTCCAGCACCAAGATCACGTGTGACGTAACACACACA
ACAACCTGTGTCAGGAGAGGAGGCAAACGTTTTGGCTAGATGATCGAGGA
AGAGAAAAAGCAAGGCGCATGTAAAGCTTAAACTTACGCTGATCGGTCTA
CCCCAAAGCCAAAGAGAGCTCGTTACTACAGCTGTATGGTTTACCACAAT
GGCAGAAACGAAGGCCAGATGCTCAATACCGAAGGTGGGGTGGTCCGGAT
CGGCAATCAACACACACACGCTTGCGATTTCAAAGAGAGAGGGGACAGGA
AGTTCGAAGCCCCAGTGTCGAGGCCACTGTGGCGTAGAAGCCTCGGGTGA
AAAAAACCCCAGAAACTTCCTGCTTGGTGTTTTGTTGAAAGCCGGACTGT
GTAGGGACAGAAGCTTGGTGAGTTGGTTAGTACGTACTTTTTGGGGTTGG
TGGAGTGCTATTTGTTGAGTTACGATGTATTGGGTTTGTCGTCTGTTTGT
ACACTGTACATTTTCCAATTTTTTGTTTTTCGATCGGCGACAACATCTCG
CCGACATACATCATATTCCGTGAGAAAAGTGTGGTATAGGAACTTAAAGC
AAAAGCAAAAACTAATGAGAGATGGCTTTTGTGGCTCCCTGTTTTTCATT
TTTTAGATGTGGTTGGCTCCCTTGTGGCTTGTGTGTTCCTAAGCTTCCCT
ATCTCAACATGTTTTCCCTGGATCTCTCGCCGCTCGCCGTCGGAGGTGGT
TTTCGTTCGTGTGATCCTGCTCGGAAGCGTTGAATTGCCCGAATGCGCAC
GTAGAAGGATGTTGTTGCATCAAGACGAAGGTCGCGATCGCGTTGTCGCA
TCACCCATCCTGGTGACAACCACGAGACTGCCCCCTAATTACATCCTTTT
TGTGCTCTCCTTTGTTTGCTTGCTCATCACCATCCTGGTGTATGCGTCTT
GTGTCTCCCCCTCTCTCCTCCAATCCAAACACACAGGCGAGGCAGGGCAA
GCGAGGAAGAAGAGGAGAAAGCCCACGGGGGGGGGCAGCCGCGATGCTCC
TGACATCGCACTTTTGTAGCACCAGCCTCAACACAGCCGGGTCGTGACGA
GATTTGTGTACCGTAAAACAAACCCCTTTCGAGCCCCGTGGGGCGCGAAA
ATAGTCTATGGATACGTACAATAATGTCCCGGGGCGTTGTCAAAGGAGGT
ATTGAGAGCGGGCGATATTTTGAACGATATACTCCATGTAATAACGCCCC
GAGGGTATTTTGACCCCGGGGGCGTTGTCTCTTGTCACACACTCACACCC
CGGGGCGGTAAAGATGCTGGGCCTCGGCGGTTGCTTCGCGGACGGCTCTG
GTGGATTCTTTCTTCTTCTTCTGGTGAAGAGCAGGAGAAGAATTAGAAGA
AGAGGGATTTGGGAGTTTTTTCCCGTTCACGGATTGTTACCGGAGCAAAT
GTTGTCTATGGGGTAAAAGCAACTACCGTAAAACACTCTGTTTCTCCCCG
GGGAGTTTTTTTGATTTTTTCCTGACACGTAAATTAAATGCCAAC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig2079:16035..21829+ >mRNA_L-elsbetiae_contig2079.6278.1 ID=mRNA_L-elsbetiae_contig2079.6278.1|Name=mRNA_L-elsbetiae_contig2079.6278.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2646bp|location=Sequence derived from alignment at L-elsbetiae_contig2079:16035..21829+ (Laminarionema elsbetiae ELsaHSoW15) ATGCCTCAGAAGTGTTCTCGCCACGGCTGCACCAAGTTCTCGTCATACGG CAAGGCCGGCAGCAAGGCGGAGTACTGCCGTGACCATGCTGAGGACGGGA TGCTGAACGTGACGAAGAAGACATGCACCCACCACGGCTGTACCAAGGTG CCGTCATACGGCAAGGCTGGCGGCAAGGTGGAGTACTGCCGTGACCATGC TGAGGACGGGATGCTGGACGTGAAGAACAAGACATGCACCCACCACGGCT GTACCAAGCAGCCGTCGTACGGCAAGGCCGGCGGCAAGGTGGAGTACTGC CGTGACCATGCCAAGGACGGGATGCTGAACGTGAAGGATAAGACATGCAC CCACCACGGCTGTACTAAGCGGCAGTCATACGGCAAGGCTGGCGGCAAGG CGGAGTACTGCCGTGACCATGCCAAGGACGGGATGCTGAACGTGAAGGAT AAAACATGCACCCACCACGGGTGTACCAAGCGGCAGTCATACGGCAAGAT GCCTCAGAAGTGTTCTCGCCACGGCTGCACCAAGTTCTCGTCATACGGCA AGGCCGGCAGCAAGGCGGAGTACTGCCGTGACCATGCTGAGGACGGGATG CTGAACGTGACGAAGAAGACATGCACCCACCACGGCTGTACCAAGGTGCC GTCATACGGCAAGGCTGGCGGCAAGGTGGAGTACTGCCGTGACCATGCTG AGGACGGGATGCTGGACGTGAAGAACAAGACATGCACCCACCACGGCTGT ACCAAGCAGCCGTCGTACGGCAAGGCCGGCGGCAAGGTGGAGTACTGCCG TGACCATGCCAAGGACGGGATGCTGAACGTGAAGGATAAGACATGCACCC ACCACGGCTGTACTAAGCGGCAGTCATACGGCAAGGCTGGCGGCAAGGCG GAGTACTGCCGTGACCATGCCAAGGACGGGATGCTGAACGTGAAGGATAA AACATGCACCCACCACGGGTGTACCAAGCGGCAGTCATACGGCAAGGCCG GCGGCAAGGCGGAGTACTGCCGTGACCATGCCAAGGACGGGATGCTGAAC GTGAAGGGTAAGACATGCACCCACCACGGCTGTACCAAGCAGCCGTCATA TGGCAAGGCTGGCGGTAATAAGGCGGAGTACTGTCGTGATCATGCCGAGG ACGGGATGCTGAACGTCAAGAACAAGAGATGCACCCACCACGGCTGTACC AAGCAGCCGTCATATGGCAAGGCTGGCGGCAATAAGGCGGAGTACTGCCG TGACCATGCCGAGGACGGGATGCTGGACGTCATCAACAAGAGATGTGCCA TTCCAGGGTGCACCACAAGGGCCAGCTACGACGACAAAAATGCTGGCACC CGGGAGTTTTGCGCACGACATGCAAGAGAAGGCATGGTCTGTCTTTCTGG CCGATCCAGGGGGGACAGCAAAACAAGTGACAGTACCGATGATTCGATCG GAGCAAGGGGCGGTGGCACCGCTAGCCGTGCTGGCTCCGGTGGAAAGCCG AGGAGTCACGTTCCCTCGCCCCCCCCAACGGCGGAAGCTTGCTCAGGAAG GAGCATGGAGACCAACAAGCGAGTCCGCCGGAGTGCTGGCGGTGGGGACT TACACCCGGTTCGGGTGAAAAGAGAGGGGGCTGTCAGCAGGTTGGCCGAC GACGAGGAAACTAGAGCATGTCCAGAGCCTACGGGTGTGGTGAAGATGGA AGACCTGTATGTTTCCTGCAAGGCGGAACCCGCAGAAGGCCGGCGGCAAG GCGGAGTACTGCCGTGACCATGCCAAGGACGGGATGCTGAACGTGAAGGG TAAGACATGCACCCACCACGGCTGTACCAAGCAGCCGTCATATGGCAAGG CTGGCGGTAATAAGGCGGAGTACTGTCGTGATCATGCCGAGGACGGGATG CTGAACGTCAAGAACAAGAGATGCACCCACCACGGCTGTACCAAGCAGCC GTCATATGGCAAGGCTGGCGGCAATAAGGCGGAGTACTGCCGTGACCATG CCGAGGACGGGATGCTGGACGTCATCAACAAGAGATGTGCCATTCCAGGG TGCACCACAAGGGCCAGCTACGACGACAAAAATGCTGGCACCCGGGAGTT TTGCGCACGACATGCAAGAGAAGGCATGGTCTGTCTTTCTGGCCGATCCA GGGGGGACAGCAAAACAAGTGACAGTACCGATGATTCGATCGGAGCAAGG GGCGGTGGCACCGCTAGCCGTGCTGGCTCCGGTGGAAAGCCGAGGAGTCA CGTTCCCTCGCCCCCCCCAACGGCGGAAGCTTGCTCAGGAAGGAGCATGG AGACCAACAAGCGAGTCCGCCGGAGTGCTGGCGGTGGGGACTTACACCCG GTTCGGGTGAAAAGAGAGGGGGCTGTCAGCAGGTTGGCCGACGACGAGGA AACTAGAGCATGTCCAGAGCCTACGGGTGTGGTGAAGATGGAAGACCTGT ATGTTTCCTGCAAGGCGGAACCCGCAGAAGGCGAGGCAGGGCAAGCGAGG AAGAAGAGGAGAAAGCCCACGGGGGGGGGCAGCCGCGATGCTCCTGACAT CGCACTTTTGTAGGCGAGGCAGGGCAAGCGAGGAAGAAGAGGAGAAAGCC CACGGGGGGGGGCAGCCGCGATGCTCCTGACATCGCACTTTTGTAG back to top
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