mRNA_L-elsbetiae_contig207.6235.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Match: D7FHS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS1_ECTSI) HSP 1 Score: 345 bits (886), Expect = 1.140e-115 Identity = 187/211 (88.63%), Postives = 193/211 (91.47%), Query Frame = 1 Query: 352 AVPTDDPLVVKRLTSQVESSSITTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSSLRRRHSVLSSLIKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMAEMSVKDMLAEFKMEDKRNEEQSNSATAIGRGGGSAVADGRATPVLTA 984 A+P DDP+VVK LTSQVESSSITTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGS+LRRRHSVLSSL+KHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMA MSVKDMLAEFKMEDKRNEEQ GRG GS D +PV +A Sbjct: 6 AIPADDPVVVKSLTSQVESSSITTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEEQGGG----GRGAGSVGGDNGLSPVFSA 212
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Match: A0A6H5JIY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIY2_9PHAE) HSP 1 Score: 177 bits (449), Expect = 3.630e-51 Identity = 97/116 (83.62%), Postives = 100/116 (86.21%), Query Frame = 1 Query: 637 RIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMAEMSVKDMLAEFKMEDKRNEEQSNSATAIGRGGGSAVADGRATPVLTA 984 RIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMA MSVKDMLAEFKMEDKRNE+Q GRG GS D +PV +A Sbjct: 3 RIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEKQGGG----GRGAGSVGGDNGFSPVFSA 114
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Match: A0A176VK39_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176VK39_MARPO) HSP 1 Score: 77.4 bits (189), Expect = 1.120e-11 Identity = 39/118 (33.05%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 418 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSSLRRRHSVLSSLIKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQS 771 T+ +QR++++ Y +L+ +NV + LTL V F+T LV + L +K +++RR ++ SL+ A ++ R+ + +E ++ L +D ++N+LQ+ LK SPAY+ M+EYG++ Sbjct: 427 TSSGSMVQRKIKEQYDELVRSNVAKSLTLAQVGRFTTCLVEAKSSLQQKSDTIQRRFTIAKSLLSKADKSSFDRLCGQIYGLEIEQKKLEEDTVVYNRLQEQLKLSPAYQKMLEYGRT 544
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Match: A0A2R6XWC9_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XWC9_MARPO) HSP 1 Score: 77.4 bits (189), Expect = 1.160e-11 Identity = 39/118 (33.05%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 418 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSSLRRRHSVLSSLIKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQS 771 T+ +QR++++ Y +L+ +NV + LTL V F+T LV + L +K +++RR ++ SL+ A ++ R+ + +E ++ L +D ++N+LQ+ LK SPAY+ M+EYG++ Sbjct: 707 TSSGSMVQRKIKEQYDELVRSNVAKSLTLAQVGRFTTCLVEAKSSLQQKSDTIQRRFTIAKSLLSKADKSSFDRLCGQIYGLEIEQKKLEEDTVVYNRLQEQLKLSPAYQKMLEYGRT 824
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Match: A0A7I4E987_PHYPA (Uncharacterized protein n=7 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4E987_PHYPA) HSP 1 Score: 74.3 bits (181), Expect = 1.080e-10 Identity = 38/118 (32.20%), Postives = 71/118 (60.17%), Query Frame = 1 Query: 418 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSSLRRRHSVLSSLIKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQS 771 T +QR++++ Y +L+ +N + LTL V F+T LV + L +K +++RR ++ SL+ A ++ R+ + +E ++ L +D ++N+LQ+ LK SPAY M+EYG++ Sbjct: 584 TYSGSMVQRKIKEQYDELVRSNAAKTLTLAQVGRFTTCLVETKSALQQKSDTIQRRFTIAKSLLSKADKSSFDRLCGQIYGLENEQKKLEEDTVVYNRLQEQLKLSPAYLKMLEYGRA 701
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Match: B8LR74_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LR74_PICSI) HSP 1 Score: 68.6 bits (166), Expect = 5.130e-9 Identity = 41/152 (26.97%), Postives = 85/152 (55.92%), Query Frame = 1 Query: 424 RNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSSLRRRHSVLSSLIKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMAEMSVKDMLAEFK 879 R +QR ++ Y +L+ +N LTL V F+ LV + L +K +++R+ ++ SL+ A ++ R+ + +E ++ L +D ++N+LQ+ LK SP+Y+ M+EYG +++ + + ++ + AE+S +++LA+ K Sbjct: 259 RGSVMQRRIKQHYDELMHSNTAGPLTLAQVGRFTNCLVEAKAALLQKSETIQRKFTIAKSLLVKADKSSFDRLCGQIYRLETEQKRLEEDTKVYNRLQEQLKISPSYQKMLEYGHGHFQSHLNTGQLLEKSEAED----AEISFEELLAQEK 406
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Match: A0A3S3NYD6_9MAGN (Uncharacterized protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3NYD6_9MAGN) HSP 1 Score: 68.2 bits (165), Expect = 5.600e-9 Identity = 36/114 (31.58%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 418 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSSLRRRHSVLSSLIKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMME 759 T+ A QR+++ Y +L+ +N + LT+ V F+ L+ R L K ++R+ ++ +L+ A R+ R+Y + +E ++ L +D ++N+LQ+ LK SPAYK M+E Sbjct: 204 TSAASATQRKIKQHYDQLVKSNDAKALTMAQVGQFANCLIEARNELQHKSEIIQRKFTITKALLFKADRSSFDRLYQQIYKLEAEQKRLEEDASVYNRLQEQLKLSPAYKQMLE 317
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Match: A0A1D1Z5Y6_9ARAE (Chaperone protein DnaK (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Z5Y6_9ARAE) HSP 1 Score: 65.5 bits (158), Expect = 7.830e-9 Identity = 35/113 (30.97%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 427 NGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSSLRRRHSVLSSLIKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYG 765 + A QR ++ Y +L+ +N + LT+ V F+ L+ R L K ++R+ ++ +L+ A R+ R+ + +E ++ L +D ++N+LQ+ LK SPAYK M+E G Sbjct: 35 SSATQRRIKQQYDQLVKSNQAKALTMAQVGEFANCLIEARNELQHKSEVIQRKFTITKALLFKADRSSFDRLCQQIYKLEAEQKRLEEDAVVYNRLQEQLKLSPAYKTMLEIG 147
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Match: A0A1U7YW96_NELNU (uncharacterized protein LOC104586621 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7YW96_NELNU) HSP 1 Score: 67.4 bits (163), Expect = 9.990e-9 Identity = 37/117 (31.62%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 418 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSSLRRRHSVLSSLIKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQ 768 T+ + QR+++ Y +L+ +N + LTL V F+ L+ R L K ++R+ ++ +L+ A R+ R+ + +E ++ L +D ++N+LQQ LK SPAYK M+E G+ Sbjct: 203 TSSSSVTQRKIKQQYDQLVKSNDSKALTLAQVCQFANCLIEARNELKHKSEIIQRKFTITKALLFKADRSSFDRLCQQMYKLEAEQKRLEEDALVYNRLQQQLKLSPAYKKMLEIGE 319
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Match: A0A835DJU0_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DJU0_9MAGN) HSP 1 Score: 67.0 bits (162), Expect = 1.320e-8 Identity = 36/114 (31.58%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 418 TTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSSLRRRHSVLSSLIKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMME 759 T+ + A QR+++ Y +L ++ LTL V F+ L+ + L K ++R+ ++ +L+ A R+ R+Y ++ +E ++ L +D ++N+LQQ LK SPAYK M+E Sbjct: 201 TSSSSATQRKIKQQYDQLKKSHESNGLTLAQVGQFANCLIEAKNELQHKSEIIQRKFTITKALLIKANRSSFDRLYQQISKLESEQKRLEEDASVYNRLQQQLKLSPAYKKMLE 314 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig207.6235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig207.6235.1 >prot_L-elsbetiae_contig207.6235.1 ID=prot_L-elsbetiae_contig207.6235.1|Name=mRNA_L-elsbetiae_contig207.6235.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=381bp TRLLRGQEGPVESREPEDPCLSLDNLFRGQGFCESTIVGEMSSLISGGERback to top mRNA from alignment at L-elsbetiae_contig207:11722..17304- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig207.6235.1 ID=mRNA_L-elsbetiae_contig207.6235.1|Name=mRNA_L-elsbetiae_contig207.6235.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5583bp|location=Sequence derived from alignment at L-elsbetiae_contig207:11722..17304- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig207:11722..17304- >mRNA_L-elsbetiae_contig207.6235.1 ID=mRNA_L-elsbetiae_contig207.6235.1|Name=mRNA_L-elsbetiae_contig207.6235.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2286bp|location=Sequence derived from alignment at L-elsbetiae_contig207:11722..17304- (Laminarionema elsbetiae ELsaHSoW15)back to top |