Homology
BLAST of mRNA_L-elsbetiae_contig206.6211.1 vs. uniprot
Match:
A0A6H5KMS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS2_9PHAE)
HSP 1 Score: 313 bits (801), Expect = 1.030e-101
Identity = 215/307 (70.03%), Postives = 232/307 (75.57%), Query Frame = 1
Query: 10 RQVPTWIYFGFLFLTRKEECLGFVASPPAQHRXXXXXXXXXXXXXXXXXXXXXXRRNAPTAAAPXXXXAAKISSAAARAPARAIAAPSSSRTALHATGFGPPPPKRPRRPRASPDPSAYHPNDXXXXXXXXXXXD-----EPFPGARDAKKVREPRGIGTLFESEDEVIRELSSEEYLDLLRDWAPIASFASVEAIDNEVKEEASCILTVLRGMAQWEPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDEGVVVEWICGNPVTLGIPGNAVAWLEQGVQALCGKRLDLPVTISARARGE 915
R++P + FGFL LTRKE C+GFVA+ AQ XXXXXXXXXXXXXXXXXXX XXX +A A RAIA SRTAL+ATGFGP XXXXXXXXXXX EPFP DAKKV EPRGIGTLFESEDE+IRELSSEEY +LLRDWAPIASFASVEAID +VKEEA+CILTVLRGMA+W+PKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSED+GVVVEWICGNPVTLGIPGNAV WL +G+ ALCGKRLDLPVTIS +ARGE
Sbjct: 5 RRIPVRLVFGFLLLTRKEGCVGFVANLAAQQHPQQXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXTATRTAAHRAIA----SRTALYATGFGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDAGEPFPRLEDAKKVEEPRGIGTLFESEDELIRELSSEEYTNLLRDWAPIASFASVEAIDTKVKEEAACILTVLRGMAEWQPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGE 299
BLAST of mRNA_L-elsbetiae_contig206.6211.1 vs. uniprot
Match:
D7FI60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI60_ECTSI)
HSP 1 Score: 181 bits (460), Expect = 2.800e-53
Identity = 82/95 (86.32%), Postives = 91/95 (95.79%), Query Frame = 1
Query: 634 MAQWEPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDEGVVVEWICGNPVTLGIPGNAVAWLEQGVQALCGKRLDLPVTISARARGEG 918
MA+W+PKRN+DYTK+GSKWSFGAPIGAIKGGQVDALACL+VSED+GVVVEWICGNPVTLGIPGNAV WL +G+ ALCGKRLDLPVTIS +ARGEG
Sbjct: 1 MAEWQPKRNSDYTKVGSKWSFGAPIGAIKGGQVDALACLEVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGEG 95
BLAST of mRNA_L-elsbetiae_contig206.6211.1 vs. uniprot
Match:
A0A0G4F895_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F895_VITBC)
HSP 1 Score: 143 bits (361), Expect = 2.840e-37
Identity = 68/145 (46.90%), Postives = 100/145 (68.97%), Query Frame = 1
Query: 460 RGIGTLFESEDEVIRELSSEEYLDLLRDWAPIASFASVEAIDNEVKEEASCILTVLRGMAQWEPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDEGVVVEWICGNPVTLGIPGNAVAWLEQGVQALCGKRLDLPVTI 894
+ +GTLF+SEDE IREL S+E+LD +R WAP+++F E + +EE + VL+ MA+W+P R+ Y W FGAP+GA KGGQ+DA+ACL++SE +GVVV +I NP+ +G+ GNA WL +G+ +C +RL + + I
Sbjct: 67 QALGTLFKSEDEEIRELGSDEFLDTMRLWAPMSNFVVNEG-NASSREEGNATRLVLQQMAEWKPPRSGSYLGKTPDWRFGAPVGAFKGGQLDAVACLEISESDGVVVRYIVLNPLNIGVEGNAADWLIKGMAFICRERLGMRLDI 210
BLAST of mRNA_L-elsbetiae_contig206.6211.1 vs. uniprot
Match:
A0A835Z8Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z3_9STRA)
HSP 1 Score: 117 bits (292), Expect = 8.750e-29
Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 634 MAQWEPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDEGVVVEWICGNPVTLGIPGNAVAWLEQGVQALCGKRLDLPVTISARARGEGGDDFE 933
M +W P R D+ + GS W+F AP+ A K G +DA+ACL+V+E++G+ + W+C NP LG+PGN++AWL +G++ L GKRLD+ V ARGE DD E
Sbjct: 1 MQKWAPARKGDFRQEGSGWAFAAPVAAFKAGNLDAVACLEVTEEDGITIAWLCENPSYLGVPGNSIAWLVKGIETLVGKRLDMAVQELPTARGELADDDE 100
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig206.6211.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 1.03e-101 / Id = 70.03 Expect = 2.80e-53 / Id = 86.32 Expect = 2.84e-37 / Id = 46.90 Expect = 8.75e-29 / Id = 49.00 Sequence A0A6H5KMS2_9PHAE D7FI60_ECTSI A0A0G4F895_VITBC A0A835Z8Z3_9STRA
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Hectar predicted targeting category other localisation
Ec32 ortholog description hypothetical protein
Ec32 ortholog Ec-10_003670.1
Exons 3
Model size 1074
Cds size 1074
Stop 1
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815848.835314-CDS-L-elsbetiae_contig206:37323..37668 1622815848.835314-CDS-L-elsbetiae_contig206:37323..37668 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig206 37324..37668 -
1691683144.1942818-CDS-L-elsbetiae_contig206:37323..37668 1691683144.1942818-CDS-L-elsbetiae_contig206:37323..37668 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig206 37324..37668 -
1622815848.8523595-CDS-L-elsbetiae_contig206:38340..38430 1622815848.8523595-CDS-L-elsbetiae_contig206:38340..38430 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig206 38341..38430 -
1691683144.2037292-CDS-L-elsbetiae_contig206:38340..38430 1691683144.2037292-CDS-L-elsbetiae_contig206:38340..38430 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig206 38341..38430 -
1622815848.86368-CDS-L-elsbetiae_contig206:39244..39883 1622815848.86368-CDS-L-elsbetiae_contig206:39244..39883 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig206 39245..39883 -
1691683144.2171307-CDS-L-elsbetiae_contig206:39244..39883 1691683144.2171307-CDS-L-elsbetiae_contig206:39244..39883 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig206 39245..39883 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig206.6211.1
>prot_L-elsbetiae_contig206.6211.1 ID=prot_L-elsbetiae_contig206.6211.1|Name=mRNA_L-elsbetiae_contig206.6211.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=358bp
MVGRQVPTWIYFGFLFLTRKEECLGFVASPPAQHRYYYCNNHHAQPSSSS SSPLIVHRRNAPTAAAPAAAPAAKISSAAARAPARAIAAPSSSRTALHAT GFGPPPPKRPRRPRASPDPSAYHPNDGDADDGDGGGGDEPFPGARDAKKV REPRGIGTLFESEDEVIRELSSEEYLDLLRDWAPIASFASVEAIDNEVKE EASCILTVLRGMAQWEPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACL QVSEDEGVVVEWICGNPVTLGIPGNAVAWLEQGVQALCGKRLDLPVTISA RARGEGGDDFEAGGGGGGGGGRVGGGGGGKNGRKADSRRNSGSSSGGRRK GGSKKRR* back to top mRNA from alignment at L-elsbetiae_contig206:37324..39883-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig206.6211.1 ID=mRNA_L-elsbetiae_contig206.6211.1|Name=mRNA_L-elsbetiae_contig206.6211.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2560bp|location=Sequence derived from alignment at L-elsbetiae_contig206:37324..39883- (Laminarionema elsbetiae ELsaHSoW15)ATGGTGGGCCGACAGGTACCAACCTGGATTTACTTCGGCTTCTTGTTTCT
CACGAGAAAGGAGGAATGCCTCGGCTTCGTGGCAAGCCCACCGGCCCAAC
ACCGCTACTACTACTGTAACAATCATCATGCGCAGCCCTCCTCCTCCTCG
TCCTCGCCGTTGATAGTCCACCGAAGAAATGCACCGACAGCAGCAGCACC
AGCAGCAGCACCAGCAGCAAAAATATCATCTGCAGCAGCAAGAGCGCCGG
CGAGAGCAATAGCAGCACCATCTTCTTCGAGAACAGCGTTGCACGCCACG
GGTTTCGGGCCGCCGCCCCCAAAACGGCCACGGCGGCCGCGGGCCTCGCC
CGATCCCAGCGCCTACCACCCGAACGACGGGGACGCCGACGACGGCGACG
GTGGCGGCGGCGACGAGCCGTTCCCCGGGGCGAGAGACGCGAAGAAGGTG
CGAGAGCCGCGCGGGATTGGGACGCTGTTCGAGTCGGAGGACGAGGTGAT
CCGCGAGCTCTCGAGCGAGGAGTACCTGGACCTGCTGCGGGACTGGGCGC
CGATCGCGTCGTTCGCGTCCGTCGAGGCCATCGACAACGAGGTCAAGGAG
GAGGCGTCCTGCATCCTGACAGTCCTGAGAGGCATGGCG GTAAGAAACAG
AAAAAATCGATTACATGCATGATACATATGTACTTCCACTTCGGAAAGTA
TGTTGTCGTCTCGACTATGATGTGCCTAAGTTCTACCGTTGTCCCCCGGT
GGTGGAAACCCACCTCATCTCTGGTCTCAGGATGTGTGATATTTATCTAG
ATATCATTTCGGAGTCCGAGGGTATGTATGTAGGATCCCTCGACCCCCGG
TGCTTCTCGCAGACGACAACGCTCGTACTTGCTCAGCAGGGCGAAGGCTC
GATCGAGCGCAAGGCTCCGCCTCGCAGTAAGAATATATATAAGCGACGGG
GTGATTCAAGGAACGGCTATACACCGCAGCATTGTCGTGGCGGAGAGAAG
AGACGGGATCTGACCAAAACATAACATGCTTCTTGTTCCTGTCTTTGGAT
TGGATCGACCGCCTCGTCGTGGAGTGAGTGTAAAGCGGTGTGGCATCTGA
GTCGGCATTTCTGGCGAAGCCGCAACAGAGCAGAACAGCAGCAGTACACA
GCAGCCGCCAAAAAAGATCGCCTCCCTCGCTGGTTTGTGGACGGCAAGAT
GAGGGGAGGAAGGCGGCGGCCCGCAAAGCCAGCCAGTCGCTCGTGCCATA
TCTGAAACCCTCGTTGAACCCTGGGGGGCGAAGGTGGCGCTGTGTATGCA
TCCCTCGCCTGCAGCGTTTATTCAGCAAAGCGCGGCAAGCTGCTCTACTG
CTGTGTGCCTGTGCTGTGTGTGCACAGCAGGCTGGCTCTTCACGGCATGC
GGGCGCGCCTGTTGCCTTGTCCTCGTGCGCGTTCTGTCTCGCTTTTCTGA
CAGCAATGGGAGCCCAAGCGCAACGCCGACTACACCAAGCTGGGGTCGAA
GTGGTCCTTCGGGGCGCCGATCGGAGCCATCAAGGGCGGCCAG GTGGGGG
CCCTTTTCTGGTTTTGTCATTCCTCGACCACCCCGTGTGCGCCCCCTTAA
AATCTTGTGATGCGGCGTTAGCTGTTTGCACAGGACTGTCTGAAGCGGAG
GTCTGAATCCCGTGGCTGGTGAAGAGTAATGGATATTCGAAGCACGCACC
CTCGTCTTCTTTGGCACACCCGTGGGTTATACATACAATATACGTACGTC
AAGGTGTACACCCCTGCAGTAGATGCTCGATGAATCGGGCTGCATGCCCC
ATGACCGCTGCTGGTATTGCGTTTCGATTCGCTTGTCGGGGAGGGGACTT
TGAAGCAAAAACCTCAAGCCTCCGGGCGGGCGTCTTGGGCATTTCTGACT
CTCATGCGTACAAGTTTCCCTGGGTTGCTGTGTTGTCACACCGGAAATTA
AGTTTATCTAGGAAAATAACCCAAACCCTAACCCCAGCCACCGACCCCCC
TTTTCCGGTTTCCATACTTATAATTTTATCTAACGTAATATGTTAGCTGA
AGACGAAAACCCTGCATAGACTACCGGGGACACCAACCAAACAACCAACC
AACCAACCAACCAACCCCCCCCCCATCCAACGTTGCGCTCGCTTTGATCG
CGCTTTTGGATGTGTCTTCGTGCACACGTGTAAATACGCATGTGCAAATG
CCCCTTGTGCGCCAGGTGGACGCCTTGGCGTGCCTCCAGGTGAGCGAGGA
CGAGGGCGTCGTCGTGGAGTGGATCTGCGGTAACCCCGTCACCCTCGGCA
TCCCCGGCAACGCCGTGGCGTGGCTCGAGCAGGGCGTCCAGGCCCTCTGC
GGGAAGCGGCTCGACCTTCCGGTGACGATATCGGCGAGGGCGAGAGGGGA
GGGAGGGGACGACTTTGAGGCGGGAGGGGGCGGAGGTGGCGGCGGCGGGC
GAGTTGGAGGTGGAGGCGGGGGTAAGAACGGGAGGAAGGCGGATAGCAGA
AGAAATAGCGGGAGTAGCAGCGGTGGCAGGAGGAAGGGCGGCTCGAAGAA
GCGCCGATAG back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig206:37324..39883-
>mRNA_L-elsbetiae_contig206.6211.1 ID=mRNA_L-elsbetiae_contig206.6211.1|Name=mRNA_L-elsbetiae_contig206.6211.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2148bp|location=Sequence derived from alignment at L-elsbetiae_contig206:37324..39883- (Laminarionema elsbetiae ELsaHSoW15) ATGGTGGGCCGACAGGTACCAACCTGGATTTACTTCGGCTTCTTGTTTCT CACGAGAAAGGAGGAATGCCTCGGCTTCGTGGCAAGCCCACCGGCCCAAC ACCGCTACTACTACTGTAACAATCATCATGCGCAGCCCTCCTCCTCCTCG TCCTCGCCGTTGATAGTCCACCGAAGAAATGCACCGACAGCAGCAGCACC AGCAGCAGCACCAGCAGCAAAAATATCATCTGCAGCAGCAAGAGCGCCGG CGAGAGCAATAGCAGCACCATCTTCTTCGAGAACAGCGTTGCACGCCACG GGTTTCGGGCCGCCGCCCCCAAAACGGCCACGGCGGCCGCGGGCCTCGCC CGATCCCAGCGCCTACCACCCGAACGACGGGGACGCCGACGACGGCGACG GTGGCGGCGGCGACGAGCCGTTCCCCGGGGCGAGAGACGCGAAGAAGGTG CGAGAGCCGCGCGGGATTGGGACGCTGTTCGAGTCGGAGGACGAGGTGAT CCGCGAGCTCTCGAGCGAGGAGTACCTGGACCTGCTGCGGGACTGGGCGC CGATCGCGTCGTTCGCGTCCGTCGAGGCCATCGACAACGAGGTCAAGGAG GAGGCGTCCTGCATCCTGACAGTCCTGAGAGGCATGGCGATGGTGGGCCG ACAGGTACCAACCTGGATTTACTTCGGCTTCTTGTTTCTCACGAGAAAGG AGGAATGCCTCGGCTTCGTGGCAAGCCCACCGGCCCAACACCGCTACTAC TACTGTAACAATCATCATGCGCAGCCCTCCTCCTCCTCGTCCTCGCCGTT GATAGTCCACCGAAGAAATGCACCGACAGCAGCAGCACCAGCAGCAGCAC CAGCAGCAAAAATATCATCTGCAGCAGCAAGAGCGCCGGCGAGAGCAATA GCAGCACCATCTTCTTCGAGAACAGCGTTGCACGCCACGGGTTTCGGGCC GCCGCCCCCAAAACGGCCACGGCGGCCGCGGGCCTCGCCCGATCCCAGCG CCTACCACCCGAACGACGGGGACGCCGACGACGGCGACGGTGGCGGCGGC GACGAGCCGTTCCCCGGGGCGAGAGACGCGAAGAAGGTGCGAGAGCCGCG CGGGATTGGGACGCTGTTCGAGTCGGAGGACGAGGTGATCCGCGAGCTCT CGAGCGAGGAGTACCTGGACCTGCTGCGGGACTGGGCGCCGATCGCGTCG TTCGCGTCCGTCGAGGCCATCGACAACGAGGTCAAGGAGGAGGCGTCCTG CATCCTGACAGTCCTGAGAGGCATGGCGCAATGGGAGCCCAAGCGCAACG CCGACTACACCAAGCTGGGGTCGAAGTGGTCCTTCGGGGCGCCGATCGGA GCCATCAAGGGCGGCCAGCAATGGGAGCCCAAGCGCAACGCCGACTACAC CAAGCTGGGGTCGAAGTGGTCCTTCGGGGCGCCGATCGGAGCCATCAAGG GCGGCCAGGTGGACGCCTTGGCGTGCCTCCAGGTGAGCGAGGACGAGGGC GTCGTCGTGGAGTGGATCTGCGGTAACCCCGTCACCCTCGGCATCCCCGG CAACGCCGTGGCGTGGCTCGAGCAGGGCGTCCAGGCCCTCTGCGGGAAGC GGCTCGACCTTCCGGTGACGATATCGGCGAGGGCGAGAGGGGAGGGAGGG GACGACTTTGAGGCGGGAGGGGGCGGAGGTGGCGGCGGCGGGCGAGTTGG AGGTGGAGGCGGGGGTAAGAACGGGAGGAAGGCGGATAGCAGAAGAAATA GCGGGAGTAGCAGCGGTGGCAGGAGGAAGGGCGGCTCGAAGAAGCGCCGA TAGGTGGACGCCTTGGCGTGCCTCCAGGTGAGCGAGGACGAGGGCGTCGT CGTGGAGTGGATCTGCGGTAACCCCGTCACCCTCGGCATCCCCGGCAACG CCGTGGCGTGGCTCGAGCAGGGCGTCCAGGCCCTCTGCGGGAAGCGGCTC GACCTTCCGGTGACGATATCGGCGAGGGCGAGAGGGGAGGGAGGGGACGA CTTTGAGGCGGGAGGGGGCGGAGGTGGCGGCGGCGGGCGAGTTGGAGGTG GAGGCGGGGGTAAGAACGGGAGGAAGGCGGATAGCAGAAGAAATAGCGGG AGTAGCAGCGGTGGCAGGAGGAAGGGCGGCTCGAAGAAGCGCCGATAG back to top