mRNA_L-elsbetiae_contig2056.6196.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2056.6196.1
Unique NamemRNA_L-elsbetiae_contig2056.6196.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: D7G2L8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L8_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 5.150e-116
Identity = 190/239 (79.50%), Postives = 207/239 (86.61%), Query Frame = 1
Query:    1 TKGLCGSYTTYSGWNLRIARAALGQIPGAPSGAIVTAVAIVTSLAFFAACFVAGSDLMKEIASRGRRLRLRGMLGGGGGXXXXGDALRAALGMLGSVYVLLAILLVVDESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGHRDRHTPSASYAYLAATAIAAQAPVLIVGATLK 717
            T G CGSYTTYSGWNLRIARAALGQ+ GAPSGAIVT V++ TSLAFFAACF AG D+MK+IAS GRRL +R MLGGG       DA+R  LGMLG+VYVLLA+LL VD +WSRRIDW+A +FAPFGAL RFFLSRQLN+R R GAFPLGTF ANVLGSLV+AL FYGT+NSS LT+GWSNVAIKAFQ GFLGSLTTMSTF+SEVVGHRDRHTPSASY YLAATAIAAQA VLIVGA LK
Sbjct:  135 TVGFCGSYTTYSGWNLRIARAALGQVSGAPSGAIVTIVSMATSLAFFAACFSAGCDVMKQIASHGRRLNIRRMLGGGALAGGDSDAVRNTLGMLGAVYVLLAVLLGVDNNWSRRIDWLACIFAPFGALSRFFLSRQLNSRLRGGAFPLGTFTANVLGSLVMALSFYGTKNSSSLTSGWSNVAIKAFQTGFLGSLTTMSTFMSEVVGHRDRHTPSASYIYLAATAIAAQALVLIVGAMLK 373          
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: A0A836C7N9_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.700e-20
Identity = 80/239 (33.47%), Postives = 112/239 (46.86%), Query Frame = 1
Query:    7 GLCGSYTTYSGWNLRIARAALGQIPGAPSGAIVTAVAIVTSLAFFAACFVAGSDLMKEIASRGRRLRLRGMLGGGGGXXXXGDALRAALGML-GSVYVLLAILLVV------------DESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGHRDRHTPSASYAYLAATAIAAQ 684
            GLCG+YTT+S W L+     +      P   I     I  S+A F      G+D+                     G    G   +AA G+  G + ++  +LLV             D SW  +  W++ +FA  GA  R+ L+RQ N ++R G FPLGTF+AN+ G+L  ALV +    +S     W + A +AF  GF  SLTTMST V+E+   R  H+      YLA+T I AQ
Sbjct:  174 GLCGAYTTFSAWTLQTNALLIAPTSDVPQPQIAALCYIFASIATFIVAHRVGADV---------------------GALLTGAVQKAAPGISEGIIAIVNGVLLVATAIGLSIALGVNDNSWLEKRYWLSGLFAIPGASLRYALARQFN-KFRGGRFPLGTFLANIGGTLACALVTHEFTKAS----DWDDTAARAFVTGFCASLTTMSTLVNELAILRRDHSVQDGVIYLASTVILAQ 386          
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: H2Y779_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Y779_CIOSA)

HSP 1 Score: 93.2 bits (230), Expect = 1.770e-17
Identity = 67/210 (31.90%), Postives = 110/210 (52.38%), Query Frame = 1
Query:    1 TKGLCGSYTTYSGWNLRIARAALGQIPGAPSGAIVTAVAIVTSLAFFAACFVAGSDLMKEIASR-GRRLRLRGMLGGGGGXXXXGDALRAALGMLGSVYVLLAILLVVDESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTG-----WSNVAIKAFQFGFLGSLTTMSTFVSEV 612
            T G CGSYTT+S WN +++   +G    A    +++ ++       F   +  G D  K+I  R G+++   G              +   L ++G+V   + + +VVD + + +  W+A +FAPFGA  R +L++   +R++   FPLGTF+AN+LG+LV+A +     N+  +T G     WS V       GF   LTT+STF+SE+
Sbjct:   62 TTGFCGSYTTWSKWNQQLSLTLVGGANAASQSQVLSILSWFVGFHSFIGSYCVGLDFGKDIGGRIGKKVSPNG---------PKISNIAVFLLLVGAVIGFI-VGVVVDPTQTGKQIWMAVLFAPFGASIRAYLAKYKVDRFK---FPLGTFLANLLGALVLAAI--NVINTRAVTCGSGAICWSTVVTYGVGTGFCACLTTVSTFMSEI 256          
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: A0A835ZHA0_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHA0_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.780e-17
Identity = 80/249 (32.13%), Postives = 112/249 (44.98%), Query Frame = 1
Query:    1 TKGLCGSYTTYSGWNLRIARAALGQ----IPGAPSGAIVTAVAIVTSLAFFAACFVAGSDL--------------MKEIASR-----------------GRRLRLRGMLGGGGGXXXXGDALRAALG-----MLGSVYVLLAILLVVDE-SWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGHR 624
            T G CG+YTT+S W L+     +        G P   +   + I   LA F      G DL              +K++++                  G   R  G  GG          +  AL      +L +    LA+ L +D+ SW RR  W++A+FA  GAL RF L+R LN  +R G FPLGTF AN+LG++  AL+ +   +     T W + A +AF  GF  SLTTMST V+E+   R
Sbjct:   40 TTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLN-AFRGGLFPLGTFAANMLGTICSALIAHAYSDYG---TDWRDTACRAFAVGFCASLTTMSTLVNELAAIR 284          
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: A0A1E4RJL9_9ASCO (CRCB-domain-containing protein n=1 Tax=Hyphopichia burtonii NRRL Y-1933 TaxID=984485 RepID=A0A1E4RJL9_9ASCO)

HSP 1 Score: 80.5 bits (197), Expect = 9.430e-13
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = 1
Query:  277 MLGSVYVLLAILLV-VDESWSRRIDWVAAMF-APFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVA-------IKAFQFGFLGSLTTMSTFVSEV 612
            +LG V  ++AI+L+  ++SW     W  A+F AP+GAL RF+LS+ LN ++++  FPLGTF AN+LG+L++A+    +R  S+ T+    V        +     GF G+LTT+STFVSE+
Sbjct:  179 ILGIVAYIIAIVLIGTEKSWR---SWTFAIFFAPWGALLRFYLSKYLNGKFKK--FPLGTFTANILGTLLLAVFTLLSRGKSISTSSHPIVTKLIGCHVLAGLDDGFCGALTTVSTFVSEL 294          
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: A0A8J5QLL5_9ASCO (Uncharacterized protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5QLL5_9ASCO)

HSP 1 Score: 78.6 bits (192), Expect = 7.480e-12
Identity = 48/124 (38.71%), Postives = 73/124 (58.87%), Query Frame = 1
Query:  262 RAALGMLGSVYVLLAILLVVDESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTR-----NSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVG 618
            R ++G+  S+ +++ +LL V      R    A +FAPFGA+ RF+LS+ LN++     FPLGTF ANV GSL++A+     R     N  ++T+      +   + GF G+LTT+STFV E+ G
Sbjct:  250 RISIGIAVSLVIIICVLLGVKSEGGWRSWTFAMLFAPFGAVLRFYLSKYLNSKMTN--FPLGTFTANVSGSLLLAIFNLVGRGKLPDNGRIVTSVIGCHVLMGLEDGFCGALTTVSTFVVELFG 371          
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: A0A7S0AQE2_9STRA (Hypothetical protein n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AQE2_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.150e-11
Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  289 VYVLLAILLVVDESWSR---RIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVAIK---AFQFGFLGSLTTMSTFVSEVVGHRDRH 633
            V VL ++ +V D  W     RI W++  F P GA+FR+ LS  LN+ W+   FPLGTF+AN+LGS V A++        L +   S ++++   A + GF GSL+T+S+FV EVV   +R+
Sbjct:  128 VGVLFSLFVVSDVQWGSPFYRILWLSCCFTPIGAVFRWRLS-LLNSHWKS--FPLGTFIANILGSTV-AILAVAIEARLLRSESSSLISVQIAAAIKIGFAGSLSTVSSFVKEVVDITERY 244          
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: E4YWW4_OIKDI (Uncharacterized protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4YWW4_OIKDI)

HSP 1 Score: 78.6 bits (192), Expect = 1.470e-11
Identity = 68/213 (31.92%), Postives = 102/213 (47.89%), Query Frame = 1
Query:    1 TKGLCGSYTTYSGWN----LRIARAALGQIPGAPSGAIVTAVAIVTSLAFFAACFVAGSDLMKEIASRGRRLRLRGMLGGGGGXXXXGDALRAALGMLGSVYVLLAILLVVDESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTT--GWSNV---AIKAFQFGFLGSLTTMSTFVSEV 612
            T G CG +TT+SGWN    L    ++LG      S      V  +  +  F      G DL +++           +L            +R   G+L    VL ++L  + E    R+ W A +  PFGAL R +L + LN  WR+  +PLGTF+AN+LGS++  ++F   R  S LT    +SN     + A   GF  SLTT+S+FV+++
Sbjct:   84 TTGFCGCFTTFSGWNHQQALTFFDSSLGTYEKGTS-----VVTWIVGMFSFVGALSCGKDLGQKLNDMKAPDSSSKLL----------ITIRIMFGLL---VVLFSLLCGLFEE--TRLIWFATLLGPFGALLRHYLGKNLNG-WRD--YPLGTFLANILGSIIYTVLFVVLRRYSNLTEEMDFSNHLKWTLGAVLTGFCSSLTTISSFVNDI 273          
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: L8H6F9_ACACA (CrcB family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H6F9_ACACA)

HSP 1 Score: 78.6 bits (192), Expect = 2.240e-11
Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 1
Query:  277 MLGSVYVLLAILLVVDESW---SRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGA-FPLGTFVANVLGSLVIALVFYGTRNSSL-LTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGHRDRHTPSASYAYLAATAIAAQAPVLIVGAT 711
            +L S   LL +L ++ E +   ++R  W+A +FAP GA+ R+ LSR   N WR    FP  TF+ N++GS+ +ALV          +        +  FQ GFLGSLTT+STF+ E+        PS  YAY+ A A    A   +  +T
Sbjct:  177 LLSSSVALLCLLWLLLEEYGGVTKRYIWIACLFAPCGAMLRYVLSRY--NAWRRCVRFPFFTFLVNIVGSIALALVVISVDLRGYDIDHELPGYTLHGFQVGFLGSLTTVSTFIGELYA-----LPSVPYAYIYAVASLGTAQAALTSST 319          
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: S9PUN1_SCHOY (CRCB domain-containing protein n=1 Tax=Schizosaccharomyces octosporus (strain yFS286) TaxID=483514 RepID=S9PUN1_SCHOY)

HSP 1 Score: 75.1 bits (183), Expect = 3.800e-11
Identity = 78/255 (30.59%), Postives = 117/255 (45.88%), Query Frame = 1
Query:    1 TKGLCGSYTTYSGWNLRIARAALGQIPGAPSG------AIVTAVAIVTSLAFFAACF------------VAGSDLMKEIASRGRRLRLRGMLGGGGGXXXXGDALRAALGMLGSVYVLLAILLVVDESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGHRDRHTPSASYAYLAATAIAAQAPVLIVGAT 711
            T G CGS TT+S W L +  A     P  P G      A+V+   +  S+AF +  F            + G  L + I      L +RG+L            L  A+G     +V ++I     +  + R    + +F+PFGA  R +LSR  N+   +   P GT +AN+LG+L+IA+V+   R +       S   +  FQ GF G LTT+STFV+E+    +  T  A   ++ + AI     V+I GAT
Sbjct:   59 TTGFCGSLTTFSSWMLEMFTAMANLDPFQPRGRGDSFLAVVSTFTLTISMAFSSLLFGKQLGKSTTHWKIGGFRLARAIPMH-THLIVRGLL------------LLLAVGF----FVGISIYTAYTKDITHRGIGFSLIFSPFGATLRLYLSRWFNSP--KYYMPYGTLMANLLGTLLIAIVYMIPRITHCSPVSQS--VLYGFQNGFCGCLTTLSTFVNELY---NMPTKRAYIYFILSVAIGFSFCVVIDGAT 289          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2L8_ECTSI5.150e-11679.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C7N9_9STRA3.700e-2033.47CrcB-like protein-domain-containing protein n=1 Ta... [more]
H2Y779_CIOSA1.770e-1731.90Uncharacterized protein n=1 Tax=Ciona savignyi Tax... [more]
A0A835ZHA0_9STRA5.780e-1732.13CrcB-like protein-domain-containing protein n=1 Ta... [more]
A0A1E4RJL9_9ASCO9.430e-1341.32CRCB-domain-containing protein n=1 Tax=Hyphopichia... [more]
A0A8J5QLL5_9ASCO7.480e-1238.71Uncharacterized protein n=1 Tax=[Candida] subhashi... [more]
A0A7S0AQE2_9STRA1.150e-1140.50Hypothetical protein n=2 Tax=Minutocellus polymorp... [more]
E4YWW4_OIKDI1.470e-1131.92Uncharacterized protein n=2 Tax=Oikopleura dioica ... [more]
L8H6F9_ACACA2.240e-1136.00CrcB family protein n=1 Tax=Acanthamoeba castellan... [more]
S9PUN1_SCHOY3.800e-1130.59CRCB domain-containing protein n=1 Tax=Schizosacch... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2056contigL-elsbetiae_contig2056:1085..3379 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score75.1
Seed ortholog evalue3.8e-11
Seed eggNOG ortholog36914.XP_001523239.1
KEGG koko:K06199
KEGG TC1.A.43.1,1.A.43.2,1.A.43.3
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.CrcB-like protein, Camphor Resistance (CrcB)
EggNOG OGs2RZ3R@2759,39JAW@33154,3Q3MS@4751,3RKPK@4890,3RTWE@4891,47BSV@766764,COG0239@1
COG Functional cat.D
Best tax levelDebaryomycetaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Ec32 ortholog descriptionPutative fluoride ion transporter CrcB
Ec32 orthologEc-11_002710.1
Exons3
Model size1777
Cds size549
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2056.6196.1prot_L-elsbetiae_contig2056.6196.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2056 1256..2322 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815847.2815697-UTR-L-elsbetiae_contig2056:1084..12551622815847.2815697-UTR-L-elsbetiae_contig2056:1084..1255Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2056 1085..1255 +
1691683143.0425587-UTR-L-elsbetiae_contig2056:1084..12551691683143.0425587-UTR-L-elsbetiae_contig2056:1084..1255Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2056 1085..1255 +
1622815847.3255582-UTR-L-elsbetiae_contig2056:2322..33791622815847.3255582-UTR-L-elsbetiae_contig2056:2322..3379Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2056 2323..3379 +
1691683143.0943031-UTR-L-elsbetiae_contig2056:2322..33791691683143.0943031-UTR-L-elsbetiae_contig2056:2322..3379Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2056 2323..3379 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815847.291435-CDS-L-elsbetiae_contig2056:1255..14881622815847.291435-CDS-L-elsbetiae_contig2056:1255..1488Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2056 1256..1488 +
1691683143.0583174-CDS-L-elsbetiae_contig2056:1255..14881691683143.0583174-CDS-L-elsbetiae_contig2056:1255..1488Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2056 1256..1488 +
1622815847.3019369-CDS-L-elsbetiae_contig2056:1633..17901622815847.3019369-CDS-L-elsbetiae_contig2056:1633..1790Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2056 1634..1790 +
1691683143.070441-CDS-L-elsbetiae_contig2056:1633..17901691683143.070441-CDS-L-elsbetiae_contig2056:1633..1790Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2056 1634..1790 +
1622815847.3150012-CDS-L-elsbetiae_contig2056:2163..23221622815847.3150012-CDS-L-elsbetiae_contig2056:2163..2322Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2056 2164..2322 +
1691683143.0821471-CDS-L-elsbetiae_contig2056:2163..23221691683143.0821471-CDS-L-elsbetiae_contig2056:2163..2322Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2056 2164..2322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2056.6196.1

>prot_L-elsbetiae_contig2056.6196.1 ID=prot_L-elsbetiae_contig2056.6196.1|Name=mRNA_L-elsbetiae_contig2056.6196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp
MKEIASRGRRLRLRGMLGGGGGLGGGGDALRAALGMLGSVYVLLAILLVV
DESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLG
SLVIALVFYGTRNSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGH
RDRHTPSASYAYLAATAIAAQAPVLIVGATLK*
back to top

mRNA from alignment at L-elsbetiae_contig2056:1085..3379+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2056.6196.1 ID=mRNA_L-elsbetiae_contig2056.6196.1|Name=mRNA_L-elsbetiae_contig2056.6196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2295bp|location=Sequence derived from alignment at L-elsbetiae_contig2056:1085..3379+ (Laminarionema elsbetiae ELsaHSoW15)
ACAAAGGGCCTGTGCGGGAGCTACACGACCTACTCCGGCTGGAACCTGAG GATAGCGCGGGCGGCGCTGGGACAGATCCCCGGGGCTCCCTCGGGCGCCA TCGTCACCGCCGTCGCCATCGTGACGTCGCTCGCGTTTTTCGCGGCGTGT TTCGTGGCCGGGAGCGACCTCATGAAGGAGATCGCAAGCCGCGGCAGGAG GCTGAGGCTCCGAGGCATGCTGGGAGGCGGAGGTGGCTTGGGAGGCGGTG GCGACGCCTTGCGCGCCGCGCTGGGCATGCTCGGGAGCGTTTACGTGCTC CTGGCCATACTGCTGGTCGTGGACGAAAGCTGGTCTCGGCGGATCGACTG GGTAGCGGCAATGTTCGCCCCGTTTGGTGCGCTCTTCAGGTTTTTCCTAT CTAGGTGCGGCTTGGTATGCACGTTGTCGCAACCCTGTGATGCGTCGGTA ACCTGCGGCCATATATCCACAAGCTTTAAGCGGCCACCACCACGTCCTCA ACGAGAACCACCCGCCCATTCCGTTATTTTACAACGCGTGTGTGTGCAGG CAGCTTAATAACCGGTGGCGCGAAGGAGCTTTTCCCCTGGGCACCTTTGT GGCTAACGTGTTGGGTTCGCTTGTGATTGCGCTCGTGTTCTACGGCACCA GAAATTCGTCCTTGCTCACCACCGGCTGGAGCAACGTCGCCATCAAGGCC TTCCAGGTTGGTTCAGGCGGACTCGTATGCTACATACCCTGTTCCCACCA TGGAACAGACATTTCGGTGATAGCGTCGAGGGGGAAAGGTTGTTTTGTTT GGACTTGTACACAGTTCAAGGAGTGTGTTCCTTCAAACGTGGCACCAACC CGGAGAGCAGGCTGGGTGTTTTTGTGTTTTCCTCTACATAACGTTTTTGT TGAACGCGTTGGAGACACGACACGTTATTGCCAATAACGTGTCTCCAACG CGTTCAACAAATACGTTGTTATTGCACATGTTTGCGTTTCGTCGCCGCAT GCGCATCAGCCAACAGAACATGCTGCCCCGGTCCATCGTTCACACCCGCC CCTTTCGCGTCCGACTGATTCCCAACCAGTTTGGCTTCCTAGGCAGCCTC ACCACCATGTCCACTTTCGTGTCGGAGGTCGTGGGCCACCGAGATAGGCA CACCCCGTCGGCGAGCTACGCCTACCTGGCGGCCACGGCGATCGCCGCAC AAGCGCCGGTGCTCATTGTCGGAGCGACGCTGAAGTAAACGGCCAGCCGA CTTGATTTACGGAAGGTGGCCCGGAGTGGCGTGACAACAAGATTTAAAAG TGCCGCGACATGTTGACCCTCGGAGAAAGTGAAGGTTACCACTCCCACCG AGTCTTCCGCTTGAGCTGGCCTAAGAAGGAAGAGGAAGCCGAGTTAGCCC GTGAGGAGCCGGAGAGAGAGAGCTTGGGGCTGAGTGACTTGAATTTACGT ATATCCACGTCCCTCGTAAAAACATCGTCGGCCGCAAAGAAACAGACAAC TGTTTTGTCGTGCGAACACTGCCTTGAACAAGCTCGCCTGGAGTGTTGAT AGTGGAAGCGGTGAGGAAGAGCGAGCGAGAGAGAGAGAGAGAGAGAGTCT TCCCACTCCTTACCAAATAGGCATAGAGCACACAACGGAAGCGCATGTTC AAACGGGTTCGATAGCCACCCCCCCGTGGAACTGTCGTAGGGTTCAGGTT AGAATAAGACAGTGGAGCTCAGGGCCTTCTTCTCTGCATACCGCGCTGTC TTTCAGCTCTGAGTTTTCCCAGCCCTTCCCTTGCGGTCTGGCGTAAAGGT ACCGAGCCAGCTCAATATTGTAAGCCTCCCGGCCTCAACGCTCAGAGGTC GAGAGCTGAGAATGGAGTGGTTGGTGGAACTTGAGTTGCCTCCGGGGAAC AGAAACAACTGTGTCCGTGTAAAAATAAATTTGTGATGCCCCCCCCTGTG ATAGAAAAGTTATGACGTCTGTTTTGAGTCCATGCCGCGCCTTGGCCGTT TCTGAGACTCAAGAGGTTGCCCCCTGAGATATAATTCCCGGTTTTTGCGA TAAAGGTAGTCGTGTTAAGAGTTTTTACAAATGAAATAGTATTAGTAGGT GCAGCGTGGCGTGTTGAGAGTGGGTTAAGGCAAGTCACTGCAGTAGCTGT AGTGGTACTTTACCGTAGCTGAGTGACCATGGCCGTGCTTTGTGAATTGC GAAAGAGACAAGAGACAGGTCTTTCATTACCAACGCCAAGCATTCAGCGC ATATCGTCAGTGTCCGCGCGTGCGGTTACTTACCTGTCATCGCAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2056:1085..3379+

>mRNA_L-elsbetiae_contig2056.6196.1 ID=mRNA_L-elsbetiae_contig2056.6196.1|Name=mRNA_L-elsbetiae_contig2056.6196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig2056:1085..3379+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGGAGATCGCAAGCCGCGGCAGGAGGCTGAGGCTCCGAGGCATGCT
GGGAGGCGGAGGTGGCTTGGGAGGCGGTGGCGACGCCTTGCGCGCCGCGC
TGGGCATGCTCGGGAGCGTTTACGTGCTCCTGGCCATACTGCTGGTCGTG
GACGAAAGCTGGTCTCGGCGGATCGACTGGGTAGCGGCAATGTTCGCCCC
GTTTGGTGCGCTCTTCAGGTTTTTCCTATCTAGATGAAGGAGATCGCAAG
CCGCGGCAGGAGGCTGAGGCTCCGAGGCATGCTGGGAGGCGGAGGTGGCT
TGGGAGGCGGTGGCGACGCCTTGCGCGCCGCGCTGGGCATGCTCGGGAGC
GTTTACGTGCTCCTGGCCATACTGCTGGTCGTGGACGAAAGCTGGTCTCG
GCGGATCGACTGGGTAGCGGCAATGTTCGCCCCGTTTGGTGCGCTCTTCA
GGTTTTTCCTATCTAGGCAGCTTAATAACCGGTGGCGCGAAGGAGCTTTT
CCCCTGGGCACCTTTGTGGCTAACGTGTTGGGTTCGCTTGTGATTGCGCT
CGTGTTCTACGGCACCAGAAATTCGTCCTTGCTCACCACCGGCTGGAGCA
ACGTCGCCATCAAGGCCTTCCAGGCAGCTTAATAACCGGTGGCGCGAAGG
AGCTTTTCCCCTGGGCACCTTTGTGGCTAACGTGTTGGGTTCGCTTGTGA
TTGCGCTCGTGTTCTACGGCACCAGAAATTCGTCCTTGCTCACCACCGGC
TGGAGCAACGTCGCCATCAAGGCCTTCCAGTTTGGCTTCCTAGGCAGCCT
CACCACCATGTCCACTTTCGTGTCGGAGGTCGTGGGCCACCGAGATAGGC
ACACCCCGTCGGCGAGCTACGCCTACCTGGCGGCCACGGCGATCGCCGCA
CAAGCGCCGGTGCTCATTGTCGGAGCGACGCTGAAGTAATTTGGCTTCCT
AGGCAGCCTCACCACCATGTCCACTTTCGTGTCGGAGGTCGTGGGCCACC
GAGATAGGCACACCCCGTCGGCGAGCTACGCCTACCTGGCGGCCACGGCG
ATCGCCGCACAAGCGCCGGTGCTCATTGTCGGAGCGACGCTGAAGTAA
back to top