mRNA_L-elsbetiae_contig2056.6196.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: D7G2L8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L8_ECTSI) HSP 1 Score: 358 bits (920), Expect = 5.150e-116 Identity = 190/239 (79.50%), Postives = 207/239 (86.61%), Query Frame = 1 Query: 1 TKGLCGSYTTYSGWNLRIARAALGQIPGAPSGAIVTAVAIVTSLAFFAACFVAGSDLMKEIASRGRRLRLRGMLGGGGGXXXXGDALRAALGMLGSVYVLLAILLVVDESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGHRDRHTPSASYAYLAATAIAAQAPVLIVGATLK 717 T G CGSYTTYSGWNLRIARAALGQ+ GAPSGAIVT V++ TSLAFFAACF AG D+MK+IAS GRRL +R MLGGG DA+R LGMLG+VYVLLA+LL VD +WSRRIDW+A +FAPFGAL RFFLSRQLN+R R GAFPLGTF ANVLGSLV+AL FYGT+NSS LT+GWSNVAIKAFQ GFLGSLTTMSTF+SEVVGHRDRHTPSASY YLAATAIAAQA VLIVGA LK Sbjct: 135 TVGFCGSYTTYSGWNLRIARAALGQVSGAPSGAIVTIVSMATSLAFFAACFSAGCDVMKQIASHGRRLNIRRMLGGGALAGGDSDAVRNTLGMLGAVYVLLAVLLGVDNNWSRRIDWLACIFAPFGALSRFFLSRQLNSRLRGGAFPLGTFTANVLGSLVMALSFYGTKNSSSLTSGWSNVAIKAFQTGFLGSLTTMSTFMSEVVGHRDRHTPSASYIYLAATAIAAQALVLIVGAMLK 373
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: A0A836C7N9_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N9_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.700e-20 Identity = 80/239 (33.47%), Postives = 112/239 (46.86%), Query Frame = 1 Query: 7 GLCGSYTTYSGWNLRIARAALGQIPGAPSGAIVTAVAIVTSLAFFAACFVAGSDLMKEIASRGRRLRLRGMLGGGGGXXXXGDALRAALGML-GSVYVLLAILLVV------------DESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGHRDRHTPSASYAYLAATAIAAQ 684 GLCG+YTT+S W L+ + P I I S+A F G+D+ G G +AA G+ G + ++ +LLV D SW + W++ +FA GA R+ L+RQ N ++R G FPLGTF+AN+ G+L ALV + +S W + A +AF GF SLTTMST V+E+ R H+ YLA+T I AQ Sbjct: 174 GLCGAYTTFSAWTLQTNALLIAPTSDVPQPQIAALCYIFASIATFIVAHRVGADV---------------------GALLTGAVQKAAPGISEGIIAIVNGVLLVATAIGLSIALGVNDNSWLEKRYWLSGLFAIPGASLRYALARQFN-KFRGGRFPLGTFLANIGGTLACALVTHEFTKAS----DWDDTAARAFVTGFCASLTTMSTLVNELAILRRDHSVQDGVIYLASTVILAQ 386
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: H2Y779_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Y779_CIOSA) HSP 1 Score: 93.2 bits (230), Expect = 1.770e-17 Identity = 67/210 (31.90%), Postives = 110/210 (52.38%), Query Frame = 1 Query: 1 TKGLCGSYTTYSGWNLRIARAALGQIPGAPSGAIVTAVAIVTSLAFFAACFVAGSDLMKEIASR-GRRLRLRGMLGGGGGXXXXGDALRAALGMLGSVYVLLAILLVVDESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTG-----WSNVAIKAFQFGFLGSLTTMSTFVSEV 612 T G CGSYTT+S WN +++ +G A +++ ++ F + G D K+I R G+++ G + L ++G+V + + +VVD + + + W+A +FAPFGA R +L++ +R++ FPLGTF+AN+LG+LV+A + N+ +T G WS V GF LTT+STF+SE+ Sbjct: 62 TTGFCGSYTTWSKWNQQLSLTLVGGANAASQSQVLSILSWFVGFHSFIGSYCVGLDFGKDIGGRIGKKVSPNG---------PKISNIAVFLLLVGAVIGFI-VGVVVDPTQTGKQIWMAVLFAPFGASIRAYLAKYKVDRFK---FPLGTFLANLLGALVLAAI--NVINTRAVTCGSGAICWSTVVTYGVGTGFCACLTTVSTFMSEI 256
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: A0A835ZHA0_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHA0_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.780e-17 Identity = 80/249 (32.13%), Postives = 112/249 (44.98%), Query Frame = 1 Query: 1 TKGLCGSYTTYSGWNLRIARAALGQ----IPGAPSGAIVTAVAIVTSLAFFAACFVAGSDL--------------MKEIASR-----------------GRRLRLRGMLGGGGGXXXXGDALRAALG-----MLGSVYVLLAILLVVDE-SWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGHR 624 T G CG+YTT+S W L+ + G P + + I LA F G DL +K++++ G R G GG + AL +L + LA+ L +D+ SW RR W++A+FA GAL RF L+R LN +R G FPLGTF AN+LG++ AL+ + + T W + A +AF GF SLTTMST V+E+ R Sbjct: 40 TTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLN-AFRGGLFPLGTFAANMLGTICSALIAHAYSDYG---TDWRDTACRAFAVGFCASLTTMSTLVNELAAIR 284
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: A0A1E4RJL9_9ASCO (CRCB-domain-containing protein n=1 Tax=Hyphopichia burtonii NRRL Y-1933 TaxID=984485 RepID=A0A1E4RJL9_9ASCO) HSP 1 Score: 80.5 bits (197), Expect = 9.430e-13 Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 277 MLGSVYVLLAILLV-VDESWSRRIDWVAAMF-APFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVA-------IKAFQFGFLGSLTTMSTFVSEV 612 +LG V ++AI+L+ ++SW W A+F AP+GAL RF+LS+ LN ++++ FPLGTF AN+LG+L++A+ +R S+ T+ V + GF G+LTT+STFVSE+ Sbjct: 179 ILGIVAYIIAIVLIGTEKSWR---SWTFAIFFAPWGALLRFYLSKYLNGKFKK--FPLGTFTANILGTLLLAVFTLLSRGKSISTSSHPIVTKLIGCHVLAGLDDGFCGALTTVSTFVSEL 294
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: A0A8J5QLL5_9ASCO (Uncharacterized protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5QLL5_9ASCO) HSP 1 Score: 78.6 bits (192), Expect = 7.480e-12 Identity = 48/124 (38.71%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 262 RAALGMLGSVYVLLAILLVVDESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTR-----NSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVG 618 R ++G+ S+ +++ +LL V R A +FAPFGA+ RF+LS+ LN++ FPLGTF ANV GSL++A+ R N ++T+ + + GF G+LTT+STFV E+ G Sbjct: 250 RISIGIAVSLVIIICVLLGVKSEGGWRSWTFAMLFAPFGAVLRFYLSKYLNSKMTN--FPLGTFTANVSGSLLLAIFNLVGRGKLPDNGRIVTSVIGCHVLMGLEDGFCGALTTVSTFVVELFG 371
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: A0A7S0AQE2_9STRA (Hypothetical protein n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AQE2_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.150e-11 Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 289 VYVLLAILLVVDESWSR---RIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVAIK---AFQFGFLGSLTTMSTFVSEVVGHRDRH 633 V VL ++ +V D W RI W++ F P GA+FR+ LS LN+ W+ FPLGTF+AN+LGS V A++ L + S ++++ A + GF GSL+T+S+FV EVV +R+ Sbjct: 128 VGVLFSLFVVSDVQWGSPFYRILWLSCCFTPIGAVFRWRLS-LLNSHWKS--FPLGTFIANILGSTV-AILAVAIEARLLRSESSSLISVQIAAAIKIGFAGSLSTVSSFVKEVVDITERY 244
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: E4YWW4_OIKDI (Uncharacterized protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4YWW4_OIKDI) HSP 1 Score: 78.6 bits (192), Expect = 1.470e-11 Identity = 68/213 (31.92%), Postives = 102/213 (47.89%), Query Frame = 1 Query: 1 TKGLCGSYTTYSGWN----LRIARAALGQIPGAPSGAIVTAVAIVTSLAFFAACFVAGSDLMKEIASRGRRLRLRGMLGGGGGXXXXGDALRAALGMLGSVYVLLAILLVVDESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTT--GWSNV---AIKAFQFGFLGSLTTMSTFVSEV 612 T G CG +TT+SGWN L ++LG S V + + F G DL +++ +L +R G+L VL ++L + E R+ W A + PFGAL R +L + LN WR+ +PLGTF+AN+LGS++ ++F R S LT +SN + A GF SLTT+S+FV+++ Sbjct: 84 TTGFCGCFTTFSGWNHQQALTFFDSSLGTYEKGTS-----VVTWIVGMFSFVGALSCGKDLGQKLNDMKAPDSSSKLL----------ITIRIMFGLL---VVLFSLLCGLFEE--TRLIWFATLLGPFGALLRHYLGKNLNG-WRD--YPLGTFLANILGSIIYTVLFVVLRRYSNLTEEMDFSNHLKWTLGAVLTGFCSSLTTISSFVNDI 273
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: L8H6F9_ACACA (CrcB family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H6F9_ACACA) HSP 1 Score: 78.6 bits (192), Expect = 2.240e-11 Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 277 MLGSVYVLLAILLVVDESW---SRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGA-FPLGTFVANVLGSLVIALVFYGTRNSSL-LTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGHRDRHTPSASYAYLAATAIAAQAPVLIVGAT 711 +L S LL +L ++ E + ++R W+A +FAP GA+ R+ LSR N WR FP TF+ N++GS+ +ALV + + FQ GFLGSLTT+STF+ E+ PS YAY+ A A A + +T Sbjct: 177 LLSSSVALLCLLWLLLEEYGGVTKRYIWIACLFAPCGAMLRYVLSRY--NAWRRCVRFPFFTFLVNIVGSIALALVVISVDLRGYDIDHELPGYTLHGFQVGFLGSLTTVSTFIGELYA-----LPSVPYAYIYAVASLGTAQAALTSST 319
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Match: S9PUN1_SCHOY (CRCB domain-containing protein n=1 Tax=Schizosaccharomyces octosporus (strain yFS286) TaxID=483514 RepID=S9PUN1_SCHOY) HSP 1 Score: 75.1 bits (183), Expect = 3.800e-11 Identity = 78/255 (30.59%), Postives = 117/255 (45.88%), Query Frame = 1 Query: 1 TKGLCGSYTTYSGWNLRIARAALGQIPGAPSG------AIVTAVAIVTSLAFFAACF------------VAGSDLMKEIASRGRRLRLRGMLGGGGGXXXXGDALRAALGMLGSVYVLLAILLVVDESWSRRIDWVAAMFAPFGALFRFFLSRQLNNRWREGAFPLGTFVANVLGSLVIALVFYGTRNSSLLTTGWSNVAIKAFQFGFLGSLTTMSTFVSEVVGHRDRHTPSASYAYLAATAIAAQAPVLIVGAT 711 T G CGS TT+S W L + A P P G A+V+ + S+AF + F + G L + I L +RG+L L A+G +V ++I + + R + +F+PFGA R +LSR N+ + P GT +AN+LG+L+IA+V+ R + S + FQ GF G LTT+STFV+E+ + T A ++ + AI V+I GAT Sbjct: 59 TTGFCGSLTTFSSWMLEMFTAMANLDPFQPRGRGDSFLAVVSTFTLTISMAFSSLLFGKQLGKSTTHWKIGGFRLARAIPMH-THLIVRGLL------------LLLAVGF----FVGISIYTAYTKDITHRGIGFSLIFSPFGATLRLYLSRWFNSP--KYYMPYGTLMANLLGTLLIAIVYMIPRITHCSPVSQS--VLYGFQNGFCGCLTTLSTFVNELY---NMPTKRAYIYFILSVAIGFSFCVVIDGAT 289 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2056.6196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2056.6196.1 >prot_L-elsbetiae_contig2056.6196.1 ID=prot_L-elsbetiae_contig2056.6196.1|Name=mRNA_L-elsbetiae_contig2056.6196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp MKEIASRGRRLRLRGMLGGGGGLGGGGDALRAALGMLGSVYVLLAILLVVback to top mRNA from alignment at L-elsbetiae_contig2056:1085..3379+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2056.6196.1 ID=mRNA_L-elsbetiae_contig2056.6196.1|Name=mRNA_L-elsbetiae_contig2056.6196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2295bp|location=Sequence derived from alignment at L-elsbetiae_contig2056:1085..3379+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2056:1085..3379+ >mRNA_L-elsbetiae_contig2056.6196.1 ID=mRNA_L-elsbetiae_contig2056.6196.1|Name=mRNA_L-elsbetiae_contig2056.6196.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig2056:1085..3379+ (Laminarionema elsbetiae ELsaHSoW15)back to top |