mRNA_L-elsbetiae_contig2053.6190.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2053.6190.1
Unique NamemRNA_L-elsbetiae_contig2053.6190.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Match: D7G3N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N2_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 3.090e-109
Identity = 167/213 (78.40%), Postives = 185/213 (86.85%), Query Frame = 1 
Query:  514 IRSLRWLRVVLSVSENPPAAEVVQAGLLPRLVQFLRQTDCPDLRPEALCSLTNIASTSCTKAVAAEPSTLPTLVALLASPDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTSTSFMRTGTWALNNLCRRLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDAGWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHD 1152
            + SLRWLRVVLS+SE PPA EVV+A L+P+LV+FLRQTDC  LRPEALC+LTNIAST CT+AVA EP+TLP LV LL+S DL+LREQSAWCLGNIAADGVEMRDLVL AGVL PLL  LSP QHG TS  FMRTGTWALNNLCR LPPPPLS V PI+ TLRP+IEAANT DA  L DAGWVLYHITRGGSDRIDAV S+G+LSMMPD++LH+
Sbjct:    6 LTSLRWLRVVLSLSETPPAEEVVRARLVPKLVEFLRQTDCAGLRPEALCALTNIASTECTRAVAMEPATLPALVDLLSSSDLYLREQSAWCLGNIAADGVEMRDLVLGAGVLEPLLLSLSPSQHGCTS--FMRTGTWALNNLCRGLPPPPLSTVAPIVGTLRPIIEAANTGDAGTLIDAGWVLYHITRGGSDRIDAVQSAGLLSMMPDMLLHE 216
[Close]
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Match: A0A812VET4_9DINO (Importin subunit alpha n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812VET4_9DINO)

HSP 1 Score: 185 bits (470), Expect = 2.910e-49
Identity = 103/244 (42.21%), Postives = 149/244 (61.07%), Query Frame = 1 
Query:  460 EKVAEAARVILGDDRQLQIRSLRWLRVVLSVSENPPAAEVVQAGLLPRLVQFLRQTDCPDLRPEALCSLTNIASTSCTKA-VAAEPSTLPTLVALLASPDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTSTSFMRTGTWALNNLCRRLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDAGWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHDTAQVVRPAIRAM 1188
            E++   ++ +L DD Q Q  + +  R +LS+ +NPP +EV+ AG++PR VQFL++ + PDL+ EA   LTNIAS +  +  V  E   LP  V LL SP+  +REQ+ W LGNIA D    RDLVL +G L P++  L      S  TS MR  TW L+NLCR  PPPP   V P + TL  +I    + D E+LTDA W L +++ G ++RI AV+ +G+   + +++LH +  V  PA+RA+
Sbjct:   82 EQIPALSQALLSDDPQAQFNATQQFRKLLSIEQNPPISEVINAGVVPRFVQFLKEINRPDLQFEAAWVLTNIASGNADQTRVVVEQGALPIFVQLLQSPNDDVREQAVWALGNIAGDSPNFRDLVLQSGGLHPVMTVL----RESEKTSMMRNATWTLSNLCRGKPPPPFEWVSPALGTLANLI---YSCDCEVLTDACWALSYLSDGPNERITAVIQAGVCRRLVELLLHTSPLVQTPALRAV 318
[Close]
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Match: A0A0K9QDA5_SPIOL (Importin subunit alpha n=4 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9QDA5_SPIOL)

HSP 1 Score: 176 bits (446), Expect = 6.870e-46
Identity = 97/238 (40.76%), Postives = 147/238 (61.76%), Query Frame = 1 
Query:  487 ILGDDRQLQIRSLRWLRVVLSVSENPPAAEVVQAGLLPRLVQFLRQTDCPDLRPEALCSLTNIAS-TSCTKAVAAEPSTLPTLVALLASPDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTSTSFMRTGTWALNNLCRRLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDAGWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHDTAQVVRPAIRAMDNM 1197
            +  D+ QLQ+ +    R +LS+  +PP  EV+QAG++PR V+FL++ D P L+ EA  +LTNIAS TS    V  +   +P  V LLASP   +REQ+ W LGN+A D    RDLVLS+G L PLLA L+  +H  +  S +R  TW L+N CR  P PP   V P +  L  ++   ++ D E+LTDA W L +++ G +D+I AV+ +G+   + ++++H +  V+ PA+R + N+
Sbjct:   82 VCSDNNQLQLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLQREDYPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLSSGALIPLLAQLN--EH--SKLSMLRNATWTLSNFCRGKPQPPFEQVKPALPALERLV---HSNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLMHPSPSVLIPALRTVGNI 312
[Close]
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Match: A0A498IGK5_MALDO (IBB domain-containing protein n=2 Tax=Malus domestica TaxID=3750 RepID=A0A498IGK5_MALDO)

HSP 1 Score: 170 bits (430), Expect = 4.690e-45
Identity = 94/238 (39.50%), Postives = 142/238 (59.66%), Query Frame = 1 
Query:  487 ILGDDRQLQIRSLRWLRVVLSVSENPPAAEVVQAGLLPRLVQFLRQTDCPDLRPEALCSLTNIAS-TSCTKAVAAEPSTLPTLVALLASPDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTSTSFMRTGTWALNNLCRRLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDAGWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHDTAQVVRPAIRAMDNM 1197
            + GD+  +Q+ +    R +LS+  +PP  EV+QAG++PR V+FL + D P L+ EA  +LTNIAS TS    V  +   +P  V LL+SP   +REQ+ W LGN+A D    RDLVL  G L PLL+ L+     +   S +R  TW L+N CR  P PP   V P +  L  +I   ++ D E+LTDA W L +++ G +D+I AV+ SG+   + ++++H +  V+ PA+R + N+
Sbjct:   81 VWGDEGTMQLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLMREDFPQLQFEAAWALTNIASGTSDNTRVVIDHGAVPIFVKLLSSPSDDVREQAVWALGNVAGDSPRCRDLVLGNGALLPLLSQLNE----NAKLSMLRNATWTLSNFCRGKPQPPFEQVKPALPALARLI---HSNDEEVLTDACWALSYLSDGTNDKIQAVIESGVCPRLVELLMHPSPSVLIPALRTVGNI 311
[Close]
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Match: A0A7S3CIU0_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CIU0_9CHLO)

HSP 1 Score: 172 bits (437), Expect = 2.010e-44
Identity = 94/238 (39.50%), Postives = 142/238 (59.66%), Query Frame = 1 
Query:  487 ILGDDRQLQIRSLRWLRVVLSVSENPPAAEVVQAGLLPRLVQFLRQTDCPDLRPEALCSLTNIAS-TSCTKAVAAEPSTLPTLVALLASPDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTSTSFMRTGTWALNNLCRRLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDAGWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHDTAQVVRPAIRAMDNM 1197
            + G   + Q+ +  W R +LS+  NPP AEV+QAG++ + V+FLR+ D P L+ EA  +LTNIAS TS    V  +   +P  V LL SP   +REQ+ W LGNIA D  + RDLVL++  + PLLA L+P        + +R  TW L+N CR  P P    V P +  L  ++   N++D ++LTDA W L +++ G +DRI AV+   +   + ++++H TA V+ PA+R + N+
Sbjct:  159 VFGPQPEHQLEATVWFRKLLSIERNPPIAEVIQAGVVGKFVEFLRRNDIPQLQFEAAWALTNIASGTSAHTKVVIQNGAVPIFVHLLESPSEDVREQAVWALGNIAGDSPKCRDLVLNSHAMQPLLAQLNP----QAKVTMLRNATWTLSNYCRGKPQPAFEQVKPALPVLAQLV---NSSDEDVLTDALWALSYLSDGTNDRIQAVIEVNVCKRLVELLVHPTAAVLIPALRTVGNI 389
[Close]
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Match: A0A540K731_MALBA (Importin subunit alpha n=2 Tax=Maleae TaxID=721813 RepID=A0A540K731_MALBA)

HSP 1 Score: 171 bits (433), Expect = 4.820e-44
Identity = 95/238 (39.92%), Postives = 142/238 (59.66%), Query Frame = 1 
Query:  487 ILGDDRQLQIRSLRWLRVVLSVSENPPAAEVVQAGLLPRLVQFLRQTDCPDLRPEALCSLTNIAS-TSCTKAVAAEPSTLPTLVALLASPDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTSTSFMRTGTWALNNLCRRLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDAGWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHDTAQVVRPAIRAMDNM 1197
            + GD+  LQ+ +    R +LS+  +PP  EV+QAG++PR V+FL + D P L+ EA  +LTNIAS TS    V  +   +P  V LL+SP   +REQ+ W LGN+A D    RDLVL  G L PLL+ L+     +   S +R  TW L+N CR  P PP   V P +  L  +I   ++ D E+LTDA W L +++ G +D+I AV+ SG+   + ++++H +  V+ PA+R + N+
Sbjct:   80 VWGDEGSLQLEATTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLMREDFPQLQFEAAWALTNIASGTSDNTKVVIDHGAVPIFVKLLSSPSDDVREQAVWALGNVAGDSPRCRDLVLGNGALLPLLSQLNE----NAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALARLI---HSNDEEVLTDACWALSYLSDGTNDKIQAVIESGVCPRLVELLMHPSPSVLIPALRTVGNI 310
[Close]
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Match: A0A2K3P583_TRIPR (Importin subunit alpha n=3 Tax=Trifolium TaxID=3898 RepID=A0A2K3P583_TRIPR)

HSP 1 Score: 171 bits (433), Expect = 8.200e-44
Identity = 96/235 (40.85%), Postives = 140/235 (59.57%), Query Frame = 1 
Query:  496 DDRQLQIRSLRWLRVVLSVSENPPAAEVVQAGLLPRLVQFLRQTDCPDLRPEALCSLTNIAS-TSCTKAVAAEPSTLPTLVALLASPDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTSTSFMRTGTWALNNLCRRLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDAGWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHDTAQVVRPAIRAMDNM 1197
            DD  +Q  +    R +LS+  +PP  EV+QAG++PR ++FL + D P L+ EA  +LTNIAS TS    V  +   +P  V LLASP   +REQ+ W LGN+A D    RDLVLS G L PLLA L+  +H   S   +R  TW L+N CR  P P    V P +  L  +I   ++ D E+LTDA W L +++ G +D+I  V+ +G+ S + +++LH +  V+ PA+R + N+
Sbjct:   86 DDNNMQFEATTQFRKLLSIERSPPIEEVIQAGVVPRFIEFLMREDFPQLQFEAAWALTNIASGTSDNTKVVIDSGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLSHGALLPLLAQLN--EHAKLS--MLRNATWTLSNFCRGKPQPAFDQVKPALPALAQLI---HSNDEEVLTDACWALSYLSDGANDKIQGVIDAGVCSRLVELLLHPSPSVLIPALRTVGNI 313
[Close]
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Match: G7KWI2_MEDTR (Importin subunit alpha n=3 Tax=NPAAA clade TaxID=2231382 RepID=G7KWI2_MEDTR)

HSP 1 Score: 170 bits (431), Expect = 9.720e-44
Identity = 96/235 (40.85%), Postives = 139/235 (59.15%), Query Frame = 1 
Query:  496 DDRQLQIRSLRWLRVVLSVSENPPAAEVVQAGLLPRLVQFLRQTDCPDLRPEALCSLTNIAS-TSCTKAVAAEPSTLPTLVALLASPDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTSTSFMRTGTWALNNLCRRLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDAGWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHDTAQVVRPAIRAMDNM 1197
            DD  +Q  +    R +LS+  +PP  EV+QAG++PR ++FL + D P L+ EA  +LTNIAS TS    V  E   +P  V LLASP   +REQ+ W LGN+A D    RDLVL  G L PLLA L+  +H   S   +R  TW L+N CR  P P    V P +  L  +I   ++ D E+LTDA W L +++ G +D+I  V+ +G+ S + +++LH +  V+ PA+R + N+
Sbjct:   86 DDNNMQFEATTQFRKLLSIERSPPIEEVIQAGVVPRFIEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIEAGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALLPLLAQLN--EHAKLS--MLRNATWTLSNFCRGKPQPAFDQVKPALPALASLI---HSNDEEVLTDACWALSYLSDGANDKIQGVIEAGVCSRLVELLLHPSPSVLIPALRTVGNI 313
[Close]
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Match: A0A5B8MRG9_9CHLO (Importin subunit alpha n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MRG9_9CHLO)

HSP 1 Score: 171 bits (432), Expect = 1.040e-43
Identity = 95/247 (38.46%), Postives = 146/247 (59.11%), Query Frame = 1 
Query:  460 EKVAEAARVILGDDRQLQIRSLRWLRVVLSVSENPPAAEVVQAGLLPRLVQFLRQTDCPDLRPEALCSLTNIAS-TSCTKAVAAEPSTLPTLVALLASPDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTSTSFMRTGTWALNNLCRRLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDAGWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHDTAQVVRPAIRAMDNM 1197
            E++ +  + +  D  + Q+ +  W R +LS+  NPP AEV+QAG++ + V+FLR+ D P L+ EA  +LTNIAS TS    V  +   +P  V LL SP   +REQ+ W LGNIA D  + RDLVL++  + PLLA L+P        + +R  TW L+N CR  P P    V P +  L  ++   N+ D ++LTDA W L +++ G +DRI AV+   +   + ++++H TA V+ PA+R + N+
Sbjct:   93 EQLPQMVQGVFTDVPEHQLEATVWFRKLLSIERNPPIAEVIQAGVVGKFVEFLRRNDIPQLQFEAAWALTNIASGTSEHTKVVIQNGAVPIFVHLLESPSEDVREQAVWALGNIAGDSPKCRDLVLNSRAMQPLLAQLNP----QAKVTMLRNATWTLSNYCRGKPQPAFEQVKPALPVLAQLV---NSTDEDVLTDALWALSYLSDGTNDRIQAVIEVNVCKRLVELLVHPTAAVLIPALRTVGNI 332
[Close]
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Match: UPI001377BB49 (LOW QUALITY PROTEIN: importin subunit alpha-8 n=1 Tax=Thamnophis elegans TaxID=35005 RepID=UPI001377BB49)

HSP 1 Score: 169 bits (429), Expect = 1.130e-43
Identity = 96/247 (38.87%), Postives = 157/247 (63.56%), Query Frame = 1 
Query:  466 VAEAARVILGDDRQLQIRSLRWLRVVLSVSENPPAAEVVQAGLLPRLVQFLRQTDCPDLRPEALCSLTNIASTSC--TKAVAAEPSTLPTLVALLASPDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTSTSFMRTGTWALNNLCR-RLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDAGWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHDTAQVVRPAIRAMDNM 1197
            + +   +I  DD  LQ+++ + +R +LS  +NPP  +V+++G++P+LV+FL   D P+L+ E+  +LTN AS S   TKAV  + + +  LV LL+SP +H+ EQS W LGNIA DG   RD ++S GV+ P+L+ ++P    ST   F+R  TW L+NLCR + P PPL AV  ++ TL  +++     D +I++D  W + ++T G + RI  VL +G+LS + +++  +   ++ PA+RAM N+
Sbjct:   73 LIDIVELIQSDDVFLQLKAAQAVRKMLSRQKNPPTNQVIESGIIPKLVEFLYYHDTPNLQFESAWALTNXASGSSAHTKAVV-DANGIQGLVVLLSSPHMHICEQSVWALGNIAGDGPVYRDTLISYGVIPPILSLVTP----STPVGFLRNITWTLSNLCRNKNPHPPLDAVRQVLPTLTCLLQHQ---DKDIISDTCWAMSYLTEGSNHRIQVVLEAGVLSRLVELLFTNELPILTPALRAMGNV 311
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2053.6190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3N2_ECTSI3.090e-10978.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A812VET4_9DINO2.910e-4942.21Importin subunit alpha n=4 Tax=Symbiodinium TaxID=... [more]
A0A0K9QDA5_SPIOL6.870e-4640.76Importin subunit alpha n=4 Tax=Chenopodiaceae TaxI... [more]
A0A498IGK5_MALDO4.690e-4539.50IBB domain-containing protein n=2 Tax=Malus domest... [more]
A0A7S3CIU0_9CHLO2.010e-4439.50Hypothetical protein (Fragment) n=2 Tax=Chloropico... [more]
A0A540K731_MALBA4.820e-4439.92Importin subunit alpha n=2 Tax=Maleae TaxID=721813... [more]
A0A2K3P583_TRIPR8.200e-4440.85Importin subunit alpha n=3 Tax=Trifolium TaxID=389... [more]
G7KWI2_MEDTR9.720e-4440.85Importin subunit alpha n=3 Tax=NPAAA clade TaxID=2... [more]
A0A5B8MRG9_9CHLO1.040e-4338.46Importin subunit alpha n=1 Tax=Chloropicon primus ... [more]
UPI001377BB491.130e-4338.87LOW QUALITY PROTEIN: importin subunit alpha-8 n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2053contigL-elsbetiae_contig2053:11488..21817 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score334.0
Seed ortholog evalue1.1e-88
Seed eggNOG ortholog2880.D7G3N2
KEGG koko:K15043
KEGG Pathwayko05164,map05164
Hectar predicted targeting categoryother localisation
EggNOG free text desc.nuclear import signal receptor activity
EggNOG OGsCOG5064@1,KOG0166@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Exons9
Model size1354
Cds size1350
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815846.742829-CDS-L-elsbetiae_contig2053:11487..120051622815846.742829-CDS-L-elsbetiae_contig2053:11487..12005Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 11488..12005 +
1691683142.6574469-CDS-L-elsbetiae_contig2053:11487..120051691683142.6574469-CDS-L-elsbetiae_contig2053:11487..12005Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 11488..12005 +
1622815846.7535853-CDS-L-elsbetiae_contig2053:14547..146571622815846.7535853-CDS-L-elsbetiae_contig2053:14547..14657Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 14548..14657 +
1691683142.6702342-CDS-L-elsbetiae_contig2053:14547..146571691683142.6702342-CDS-L-elsbetiae_contig2053:14547..14657Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 14548..14657 +
1622815846.7637968-CDS-L-elsbetiae_contig2053:15730..158761622815846.7637968-CDS-L-elsbetiae_contig2053:15730..15876Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 15731..15876 +
1691683142.6795156-CDS-L-elsbetiae_contig2053:15730..158761691683142.6795156-CDS-L-elsbetiae_contig2053:15730..15876Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 15731..15876 +
1622815846.7736173-CDS-L-elsbetiae_contig2053:16414..165511622815846.7736173-CDS-L-elsbetiae_contig2053:16414..16551Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 16415..16551 +
1691683142.6885316-CDS-L-elsbetiae_contig2053:16414..165511691683142.6885316-CDS-L-elsbetiae_contig2053:16414..16551Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 16415..16551 +
1622815846.7839334-CDS-L-elsbetiae_contig2053:17751..178921622815846.7839334-CDS-L-elsbetiae_contig2053:17751..17892Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 17752..17892 +
1691683142.6993337-CDS-L-elsbetiae_contig2053:17751..178921691683142.6993337-CDS-L-elsbetiae_contig2053:17751..17892Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 17752..17892 +
1622815846.8019454-CDS-L-elsbetiae_contig2053:18836..189451622815846.8019454-CDS-L-elsbetiae_contig2053:18836..18945Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 18837..18945 +
1691683142.7114782-CDS-L-elsbetiae_contig2053:18836..189451691683142.7114782-CDS-L-elsbetiae_contig2053:18836..18945Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 18837..18945 +
1622815846.8169086-CDS-L-elsbetiae_contig2053:20120..201831622815846.8169086-CDS-L-elsbetiae_contig2053:20120..20183Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 20121..20183 +
1691683142.7195024-CDS-L-elsbetiae_contig2053:20120..201831691683142.7195024-CDS-L-elsbetiae_contig2053:20120..20183Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 20121..20183 +
1622815846.833129-CDS-L-elsbetiae_contig2053:20995..210581622815846.833129-CDS-L-elsbetiae_contig2053:20995..21058Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 20996..21058 +
1691683142.729796-CDS-L-elsbetiae_contig2053:20995..210581691683142.729796-CDS-L-elsbetiae_contig2053:20995..21058Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 20996..21058 +
1622815846.8473313-CDS-L-elsbetiae_contig2053:21752..218151622815846.8473313-CDS-L-elsbetiae_contig2053:21752..21815Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 21753..21815 +
1691683142.7438545-CDS-L-elsbetiae_contig2053:21752..218151691683142.7438545-CDS-L-elsbetiae_contig2053:21752..21815Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2053 21753..21815 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2053.6190.1prot_L-elsbetiae_contig2053.6190.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2053 11488..21815 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2053.6190.1

>prot_L-elsbetiae_contig2053.6190.1 ID=prot_L-elsbetiae_contig2053.6190.1|Name=mRNA_L-elsbetiae_contig2053.6190.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=450bp
THTYATQTIQTKTPQTMDVPRGRPSGERKSLTLDERRKERRASSDRRKSG
PKAVDVSSLRDGKAGRRRLSADHRRTSRSNKAATLRRERGQPRPPLIGHR
GIGRASLPARLPRAATAVVPAAESKAHDDGGVAAMEEQGEEKAGEDHEGS
WTPEKVAEAARVILGDDRQLQIRSLRWLRVVLSVSENPPAAEVVQAGLLP
RLVQFLRQTDCPDLRPEALCSLTNIASTSCTKAVAAEPSTLPTLVALLAS
PDLHLREQSAWCLGNIAADGVEMRDLVLSAGVLGPLLACLSPPQHGSTST
SFMRTGTWALNNLCRRLPPPPLSAVLPIIDTLRPVIEAANTADAEILTDA
GWVLYHITRGGSDRIDAVLSSGMLSMMPDVILHDTAQVVRPAIRAMDNMA
CSSAAHRGALIEAGVLDPLVETLGHDSAKVRADALRLLSCIAAGSPDQVT
back to top

mRNA from alignment at L-elsbetiae_contig2053:11488..21817+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2053.6190.1 ID=mRNA_L-elsbetiae_contig2053.6190.1|Name=mRNA_L-elsbetiae_contig2053.6190.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10330bp|location=Sequence derived from alignment at L-elsbetiae_contig2053:11488..21817+ (Laminarionema elsbetiae ELsaHSoW15)
ACACATACATACGCGACACAAACGATACAAACAAAAACACCCCAAACCAT
GGATGTTCCCAGGGGCCGACCATCAGGAGAAAGGAAGTCTCTGACGCTGG
ATGAGAGGAGAAAGGAGCGACGAGCGTCAAGCGACAGGCGGAAAAGCGGA
CCGAAGGCAGTAGACGTTTCGAGCCTCCGCGACGGGAAGGCGGGTCGGAG
GAGGCTGTCGGCAGACCACAGAAGGACAAGCCGGAGCAACAAGGCGGCCA
CCCTGCGCCGCGAGCGCGGCCAGCCTCGCCCGCCCCTTATTGGGCACCGC
GGTATCGGCAGAGCTTCTCTTCCCGCCCGGCTTCCGCGGGCAGCAACGGC
CGTCGTCCCTGCTGCCGAGAGTAAAGCCCACGATGACGGCGGTGTCGCAG
CCATGGAGGAGCAGGGGGAGGAGAAAGCGGGGGAGGATCATGAAGGGAGT
TGGACGCCGGAGAAGGTGGCAGAGGCTGCAAGGGTTATTCTCGGCGACGA
CAGACAGTTGCAAATCAGGTATGTACATAATGTTTGGTTTGCTTAGTTGT
CTTCACATTAAAAACCATTCCGATTTTTCTCTTTTCTCTACTCTACCCAC
GGTACCCGTGTCTAAGGCAAGTGGATAAGGCACGCAGGCGAAACAATTCA
GGATAATGCAAAACGTGGCACGGTACCTCCATAAATACTACCGGTACGTA
CGTCTATAGCTAGTTTATATATTGGTATGCATGCAATCGTCCGTACTATG
TAGTTCAGATGCGGTCGATTCCCGTGGTCACAGCAGCTGACCCTAAAAAG
GGTTTTACTGAAACACGAAAATGGACCCGAAGGTCAGCAAAGCGAAACAC
AAAGTATCAGACACAAACAGGCCGCCTGGAGCTCTTGGCGCTCCTCCGCT
TCCCTCTGCCTCTACATACACGGCTAGTGAGGTACTGCTGTAGAAACAAG
ACTGGAAAGTCAAGATCACCAACCGGGGGGGTATAGTCTACCCCCTGTTC
TACCTTGGTTTTCACCAATAATGCCGGGGGTGTTCCGTGCCGGATTCTCG
AACCCGGGCCAACCAATCTACAATACCCCACCGATTTTTCTACCGCACAC
ATGGTCCAACAAGAAGAGGAAAAAGGACATAGGATAAGAAAACAAATCGG
GAAGTGCAAACAAACGGACAGACAGACAGACAGACCGACGCGTGAAGCCC
CAGCAAACAAAATAGGTACCTACAATAGGTGACATAAGATACCGCCCCCC
CCCCCCCCTGGACAGATTTTCAAAGCTCGGTCCCTCCTCCAGCAGGAAGA
GTTGTCATGCCGAAAGGGGGTGGCGTTGGAAAGATCTTGTCGAGGGCTGT
CCGAAAATGTGTCGTTTGGTGCTGGCGCCCTCTTCGCTACGGAGTGATGG
AGCTCTACAATTCGGCTCAGGGGGTGTGGTATCTTGTGTCACCTCTTCCG
GGTACATACGGCAGCAAAGCTTGAGCTACAGCAGCGGCAGGCTTCGCACG
GATTTTCGTAAAGCAGCCGATTGGCGTAAGGTTCGGCAATTCCAAAATAG
ACAGCCCTACTGCCAATGCGCTTTGCTGCCGCGCGAGGATATTTGGATAT
TTGGGGGATCCGCAGCGGCGAGAAAACACACACACACACACACACACAAT
CACCGTTGAGGCGGCGTGTTGCACGTCGATTTCGTCAATTTTGTCTGTCT
CCGGCTTTGCGGCCAGCGTCTCCACCTTTCGCCGCTCCCAAGACGACCCT
TGCCTCACACATATCGTAGGCGACACAAGATACCACCCCCCCCCTGGGCA
TATTTTCAAAGCTCGATTACTTCGTAACGAAGAGGGTGCCAGCACCAAAC
GACACATTTTCGGACAGCCCTCGACTATATATTTCCAACGCCACCCCCTT
CGGCACTCGCACTCTTCTTGCTGGGCAGGAATTGAACTTGGAAAATCTGT
CCGAGTGGGCTGGTATCTTGTGTCATTCATCTACGGTATGTACATACATA
GAGGTATGTATAAAAGGGCCCAAAATAAGAAAATAGCACACCCCCTGGAC
CGATTTTCAAAACTCAAGAGTAATATACTCCACAGCGAGAAGAAAAAGAG
GGTCAGTCCCGAAAAGATCGGCGTTGGAATTATTTCATCAAGGGCTGTCC
GAAATCGTGCAGGTGCGGAGTAACCGAGCTTTGAAAAATCCAGTCCAGGG
GGTGTGTTATCTTGTGTCGTATAACTACTGTATGTATGTATGTATCTAGG
GCACAGACTAACTCTTATTAAGTACCAAGCCTGTGTCACGCCCAGCGACC
CACCATCGAGAGAATACCATCGTGAGCTCGACACCGCCAGTCACGATGCC
ATCCACGGATTCGCGGATACGCTCCATGCCTGGTCCATGTTCGTGCGCCA
ACAAGGCATCTACGTATACCTGCCGCAATTGTGCGGGGGCTGTCGCACCC
CCCTGGACCGATTTTCAAAGCTCAAGAGTAATATACTCCACGGCAAGAAG
AGCGTCAGTGCCGAAAAGGGTGGCGTTGGAAAGATCACGTCCATAGCTGT
TCGAAAACGTGTCAGTTTGGTGCTGACACCCTCTTCGCGAAAATAATCCC
TGCCTTATATACATAAATAGAAAACGAATTATAGTCAGGGGTTCCGTAAC
CCTAACCCTAACCCTAACCCCAAACTGACCCCCTATTAGCCGTTTCCATA
CTTGATCCCATATGATTTATTCCAGTAAAACCCTGCGAAGGCTACTGTTG
CTCGGCGAGGCGAAGTGTAACGAACACGGCATTCCTTCGGCGTTCCTTCT
CTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCTCTCCGTCCTG
CTTCCGCCCCGCCCCCCGCCCCCCCGCCCTGGGCCGGGGGGGGGGGCGCG
CGGGGGGAACGCCCCCCNNNNNNNNNNACCCTGCGAAGGGTCCTGTTGCT
CGGCGAGGCGAAGGGTAACGAACACGGCATTCCTTCGGCGTTCCTTCCCC
CCCCCCCCCCCCCCACGCCCCGTGTATGCATGCATGCGTGCCTTGCTCGA
ACCGCTGCAGGTCCCTGCGCTGGCTGCGCGTGGTGCTGAGCGTATCGGAG
AATCCTCCCGCCGCCGAGGTTGTCCAAGCCGGGCTCTTGCCTAGGCTCGT
GCAGTTTCTTCGGCAAACAGGTGCGACGGCGACGGCAACAGAGAACAGCA
GTACATACATACCGTAAATAAGTGAGACACAAGATGCCACACCCACCCCC
TGGACAGATTTCAAGCCTCGATGCCTTCCTCCCCAGCAAAATAAAAGTGC
CAGTGCCGAGAGGGGGTTGGGGTTGGGAAGGTCTAGGGGTGGTGGGATGG
GGGAGTGGCTTCTGGCGAGAGATGGACGGAGGCGTGCGTGCGAGACCAAT
GCTTGTTTTTCGGATCGCTTCGCGAAGAACTTTCTGTCTTATGTATTGTA
TAGGAAATAATATACAGGTCCCGTAGCCCCCAACCCTAACCTCCCCAAAC
CGACCCCCTCGTCAGCCTTTTTCATACTTTAGTAATTCCATATGTATGAT
TTTTTTTTTTCTAGTAAAACCTGCGAAGACTACTGGGCTTTGCCCTCGCC
CGGATTCGCTCGAACAGCAACAATCAGAACGCTCGCAAGCCTCGACGAAC
CACCGCACACACTGTTAACGTTGTCTTGTTGTTGCTATTTCTTCACATGA
GAGGGTTAGCTCGTATAATCGAGATTGCTCATTCCAAAAATCTAGCAACT
CCGGGCCCGTGGTCGCAAAAAACGACCTGTCTCTACCTGTCTGTCTACCT
GGCTGTCTGTCTGTCTGTCTCTTTCGCCGTGTTTGCCTCTCTTGGACGGC
AGACAGTCTGGAGCTATGTAAAAGTATGTACGTTATTCGCGCGCCCCGCG
CTCTGTGCCATGTTTCCCTTTGCCGACCTGTCTTACTCACCTCGCCCGCC
GAGACTTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCCCTTTCTCTCTCTCTCTGCATGTGTCCCTGTGTCGACAGCAGC
AGACTCTCCGGAGCTACGAGCCCGAGACCCTGTGCCAAGTTGATCTCTGT
GTTACATACGTGCCTTACGTCTTACATGCCCCGGGCGGGGGCGGCCGGTT
GATTGTGTGCTTTACTTGCCCCTTTTGCCTGTCTCTCGATGTATTGTACC
ACATACACCCCTCCCGGCATTTCCCCTTCCGCCGGCTGGACAGACTGTCC
GGACCTGCGCCCCGAGGCCCTGTGCTCCCTGACCAACATCGCCTCCACCA
GTTGCACCAAGGCCGTGGCGGCGGAGCCGTCAACCCTGCCCACGCTCGTG
GCCTTGCTCGCCAGCCCCGACCTTCACCTCAGAGAGCAGGTCGGTGCGCG
CGTGCGCGCGTGCGGGGGGTTGTTTCGGTCTTCTTTTGCGTTGTGTTCCT
CTTTCTTCCCCCGTTCTTTTTGTGAAGAGAAATCAGAAGTATCGAGGAAG
GAACCTCCACCTCTCTCTCTGTCACACACACAAAAGAGACAGGACTCTAA
GCGATGGATTGGCATGTTTTTACGGTTTGTATTGTGTAGTGATGTGGACG
TTTCTGTGTTCGTTTTTTGCCGGATAGGCTACTGCTACTGCTGCTGCTGC
TGCTGCTACTGTTGTTGTTGCTGGTGCTGCTGGTGCTGCTGCCGTTGTTG
TTTGTGCTTGCGCGGATCGCGCGTTACGGAGTGCCCCTGACCGCTTTGCG
CAGTTTTTGCGGGCAGCAACAACAGTCTCGTAACAATCCCATTGTTACTG
CTGCTGTTGCGGTCGCTGTTGTTTTCTGTGCTGCTGGTGTTGTTGCTGTT
GCTGTCATCCCGGGGCCAGAAACTCGAACGTTCAAGGCACCCCCCGCCCC
TCTCTCCTTCCCTATCCCCCCCTCCAGAGCGCGTGGTGCTTGGGAAATAT
CGCCGCGGATGGCGTCGAGATGCGCGACCTGGTCCTGAGCGCAGGGGTGT
TGGGGCCGCTACTGGCCTGTCTCTCTCCGCCCCAGCACGGCTCCACATCA
ACGTCATTCATGAGGTAGGTCGGGGTCAAAGGGGCTTCCTCTGGGTATTT
CTATAGCCGAGGAAGGTCACTCATGAGGTGAGGTGCGTCGAGTTGGGTGA
TCTGCTCACCTTTCGATAGCTTGCGATGGAGACCAAGCCGCCCGCCGCGA
GTACCGTGTACGACACAAGATAACACACCCCCTGGGCCGATTTTCGAAGC
TCCGTTACTCCGCAAAACGAGCTTGATTCTAAAACCAAACGACACGTTTT
CGGACAGCTCGTGATGAGGTCTTTCCAACGCCGCCCTCTCCGGGACCGAC
ACTCTTCTCGCTGTGGAGTACTTGAGCTTTGAAATTCGGTCCAGGGTGTT
GTGTGTCCGCCGTGCTTGGCCAAGCTGGAGTGTTTAGTTCGTCTGCCTTG
GGGTAGAGTTCGCGCGTTAATCTTCGAGGCCTCCTCACTCACTCGCGGGA
GGGCTTTACGGCGTGAGGACTCGCGCACACACGTCGTTACCCGCCCGCGC
GCCTTCCTCTCTTCTCCGCTCGACCTTACCAAGGCACCCACAATGCTGGA
AGTTTTTTTTTAAATAAACAACGAATAAAAGATGGAACCTACCGCACACT
AGGGCAAGGACTCGATATGGGGTTCAAACGGTATTCCATACAGAGACGTA
GTATTTGGCGAAGCGAGCAGAAAAACAACCCTAAATATCAGAAGGGTTCA
ACATCTCCCCTGCAAAGATTTTTTTGTGAAGCTCCCATGTACGCATCCGG
AGTAGACGCACCTACATATCATAGATAAACGCACGGTGCCGCGTAGGGTC
TGACCTGTTACACATGCACGTTTTCTTAAAAACGAGTTGTGCTTATTTCC
CAAAATCGAGCATATTTCAAGTATTTATGCACGTAGAAAATTGTCACTTA
TGCTCGTGTTTGTGCTCAGCAAGAATAGTTGTGCCTGAAATGTGCTCGAA
TTTCGTACCATACATAATTAGGCTTTTTTGGATGCTCAAAAAGGCCATTT
AGCCGCATTTTGTGCATGCTTGTCCTAACTCTCTCTCTCTTTCTCTCTCT
CACCCCCTCCCGCCCTTCTTTCCTAACTGTTGTGCCCCCTCCTTCGTTTC
GACACCTTGATCGCGTCTCTTTTCTGTTTGTTCTGCTTTTTGTTTTCTCT
CGCTGCTGCCATGTGTACCTCCCCCCCGCCCGCCCCCTGCTCTACCTCTC
TACGAACTCCGCAGGACGGGCACGTGGGCGCTGAACAACCTCTGTCGCAG
GCTCCCGCCGCCGCCCCTGTCGGCTGTCTTGCCCATCATCGACACCCTCC
GCCCCGTGATAGAGGCGGCAAACACTGCCGATGCGGAAATTCTCACGGAC
GCCGGGTGGGTACCGCATACGAGACACAAGATAACACACCCCCTGGACCG
ATTTTCAAAGCTCAAGTACTCCACACAGCGAGAAGAGTGTCGGTCCCGAA
AAGGCCGGGTGTTGGAAAGATCTCATCAAGAGCTACAATAGCTGTCCGAA
AACGTGTCGTTTGGTATTGGAATCATACTAGTCGCGGAGAAACCGAGCCT
TGAAAATCGGCCCAGGGGGGTTGTTATCTTGTGTCGTATACGGTAAGGGC
GGACGCCCAGTGTGCGTGACGTGCGGGTGGGGGGGGGGCTGTCCTGACTC
GGCTGAGCCCCCCCCCACTGGAGGCTCGTGCTATCGCTGCGATGCTTGCA
GAGGGGGCTGGCCCCGCCGTTTCCGCAGAGGGTTGGTCTAGTGTTATATG
CTTGTGAAAAATAACTCTATAATACGGAGTAGTAGCAATAAGCAGTGGGG
GTGACGAGGTATGTAACATGTTTTCTGCGAAGCATGGGGTGTCCGTGATA
CTTGTACGTTTGTATTATACCCGTATCTACATAGCGTGTTGTCGTCACCT
ACGCGATTGATCGCGTTGACCACTGCTTGCTGCTGCTGCTCCTGCTGCTG
CTGATGTGCTGATGCTGCTGCTGCCGGTGTCCGCGATACCTCTACGTTTG
TACCCGTATCCTGTGTTGTCGTTACCTACGCTCTTGATCCCGTTGACCAC
TGCTTGCTGCTGCTCCTGCTAATGTGCTGATGCTGCTGCTGCCGGTGTCC
GCGATACTTATACGTTTGCACCCCTTATCTAGTGTGTTGTCGTCACTTAC
GCTCTTGATCCCGTTGACCACTGTTTACTCCTGCTGCTGCTGGTGCTGGT
GCTGGTGCTGGTGCTGGTGCTGCTGCCGCTGCGTCTGCTGCTGCTGCCGG
TCCGTGCTCTCCCCCCTTTGCTGTTGTTGGCTTGCACGCGGACGGGTAGT
TGGGTTCTGTACCACATCACGAGGGGCGGGAGTGACCGCATCGATGCCGT
GCTGTCCTCGGGGATGCTGTCGATGATGCCGGACGTGATCCTCCACGACA
CCGCTCAGGTGAAAAAAAAAGAAAAAAAAAAAAAGAGACGAGGAGGAAAC
AGCGAGCGATCTTCTGATCCACAGGCGTCAAGATGCGTGCGTGTGTGGAA
TTTCTCTGATCAAAACCTAACGCGGCCTACCCTCGCGAGCGGGATCGAGG
GCACAAAGAAAACACCAGCAGCACCAATAACTCCCATCCCGTCGACGAAG
TGACGCAAGTCGACCGGACAGCAGGATTGTCCCTTTGTGATGGTGCACTT
CGTACATGTACTGTATGTATACCAGAAGTTCTCATCACTTGGCTTGAACC
AGCCAACTCTTCGGCATTTTTTTCTCAGCGTTGTTGTTGTTGTTGTTGTC
GTTGTTGTTAATGATGATTCGCTCGCCAGACCGTACAATCGAAATTGCGT
TTGGTGAAATGTACCTCGGTGTCCAAACGAATGAAAAAAAAGTCACAAAA
CGAGATCAAGCAAAACCACGCGGCCCGATCGACACAAAAAGCGCTAGAGC
CACCAATGACGAACAAAGACACACACACACACACACACACACACACATGC
GCGCGAGCACACACACGCAGGAAATGGAGGGCGCGTACTTGTTGACCACA
TGGCCGACACAACGAGGATAAACGAGGAAATAACGAAAGAACAAACCAGA
CCCGGGCAGGGGTTCGATCGAGTCGACACGATCACGATGCCGTTACCTCT
CCTCCTCCTTGAGGGTGGAGCGCGTATGTTTATTAAACATGTACGAATCG
TATCGGCGGCGGCGGCATTCTGTATTCTACCAGCTCCATAACCAAAACCT
TAACCAAAATCAAGTGCGTGCTTCTTGATCGGACCGCCTACTACGCCGGA
AACTAAGTTTATCTAGGAAAATAGCCTTACCCTAACCATATCCCCAACCA
CCGACCCCCCTTTCCCGGTTTCCATACTTTATCCTCATGTGTTAGGTTTC
CATACTTTATCTCATATGTTAGCTCAAGATGAAAAGATGAAAACCCTGCC
TAGACTACCGTCTTGATCAGCCCGCTTTTGTACGTCGTCCGCTGTGTCGC
GAGGCCGAGCGGAGGAGCACGCACGGGCAACAGACTGAACTGCTTTTTTC
CGTTCTTTCCTTTCCTTTCCGCCCCCCCCCCCTCCCCCCCCCTCTACCCT
CGCCGACGCCACATTGTCGATCGAAACGAGCAGGTAGTTCGGCCGGCGAT
CCGTGCGATGGACAACATGGCTTGCAGCTCGGCCGCCCATCGAGGAGTGA
GTCCGGATCGAGCCCGTTCCGTTGCCCGGATCGTTCTCAATAACGTTCCT
AGAACGCCCCTGCGAAGCCCGTTCCGTTGCCCGGATCGTTCTCAAGAACG
TTCCTAGAACGTTCCTGCGTTCTGGCGGTAACTCATCATGTAGATCGCGC
GCTTTATCCCTCTGCTTGAGATAACAGACACTATAGGGTGGTAGCTGGGG
TGGGTGGTGCTTTTACGTCTTCGTGGGCGCGTCTGGGTGCTTTGCCTCCC
TCCATTGATTGTCAAGAGGTTCTGCGCTGGCCCCTAACTTGGAAGAAACG
AAAGGACCTCCCGCGCAGCAGGTGGTGCGTCTTCATCGCCCCCCCGGGAA
AACGCTTTTGATGTATGCCCAGTCGACGCACTCATGCGCGCCACGTGCTG
GGCTCGCATTAGTTTGTTCATCATGGCTGCTTCGTTGTGCGGTTCGTCGA
ACAACGACCGCGGGAGGGACTCCGCAGTCAGGAGTCATCGCAGGCTGCGT
TCGTTCTGCACATCGGAATCGGTGGCTGATGGGGCCGAGCGTGACTGGCC
AGCAGGGTTCGCTGGTCGTGCCAGCACGTCTCGAGGGCACTCCGCCGTGA
GTGCGTGCGGGCCCGGCATGCTTCGCCCCTTCGAGGCTTTGCGGAGATTG
CGAGGTCAATGGTCTAACGATCGCGCAGGGCTACGGCACATGCGTGACGA
GAAATGTGGCGTACGTACCCCCCCACCGACCCATCCGCCCACCATGAAAA
ACTTCTGGGAATCGTGAATAATTGTCGCTACTGTTGTTGTGCATACCCTC
CTCGCCAGGCGCTTATCGAGGCCGGAGTTCTGGACCCGCTCGTCGAGACC
CTCGGACACGACAGTGCTAAGGTGCGAAGAGCCCAAGAAGCGGTCCGTCT
CAGTTTGAAAGAGAAACAGTTAATCAAACATGGAACCTAACCCACATTGA
GACGGGGGGCTCCGTGAGATTCAGCCGGTATTCCATTAAGTGACGTAATA
TTGGTCCGTCTCAGTTTGCCGACGAATCGTTTTTTTTTGCTCTTATCCAA
AGGATGCATACCTGCGTATTTACCATAGACCCGGACGAGGATCCGGGTAA
ATTGTTGATATTGACGGAGGTATGTTGCCGTTTCGTCAAACATGTCGTCT
AGCAGTGTTCTGTGTCTATCCTGGGCCCAGGTACAGTGATAACTCCCCTG
AAATGATGTTTTTCACCGGTCGGACGTACCGTAGGTGACACAAGATACCA
CACCCCCTGGGCAGATTTTCAAAGCTCGATTCCTCCCCAGCAAGAAGAGT
GCCAGTGCCAAAAAGGGTAGCGTTGGAAATATCTAGTCGTGGGCTGTCCA
AAAATGTTTCGTTTGGTGCTGGCACCTTCTTCGTTACGGAGAAATCAAGC
TCTAAAATTCGGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAGAC
AGCTGACGATTCGTACCCAAAGTTAAACACCACACTCATGAACCTTCGTG
CGTGCCCCCCCTCCCCCGTCGTCGTCGTCGTTTTTTTTTTTCGGGTAAAT
TACATGCATATGCAGGTGCGAGCGGATGCGCTCCGGCTGCTGTCGTGCAT
CGCGGCAGGCTCTCCCGACCAAGTCACCGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2053:11488..21817+

>mRNA_L-elsbetiae_contig2053.6190.1 ID=mRNA_L-elsbetiae_contig2053.6190.1|Name=mRNA_L-elsbetiae_contig2053.6190.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2700bp|location=Sequence derived from alignment at L-elsbetiae_contig2053:11488..21817+ (Laminarionema elsbetiae ELsaHSoW15)
ACACATACATACGCGACACAAACGATACAAACAAAAACACCCCAAACCAT
GGATGTTCCCAGGGGCCGACCATCAGGAGAAAGGAAGTCTCTGACGCTGG
ATGAGAGGAGAAAGGAGCGACGAGCGTCAAGCGACAGGCGGAAAAGCGGA
CCGAAGGCAGTAGACGTTTCGAGCCTCCGCGACGGGAAGGCGGGTCGGAG
GAGGCTGTCGGCAGACCACAGAAGGACAAGCCGGAGCAACAAGGCGGCCA
CCCTGCGCCGCGAGCGCGGCCAGCCTCGCCCGCCCCTTATTGGGCACCGC
GGTATCGGCAGAGCTTCTCTTCCCGCCCGGCTTCCGCGGGCAGCAACGGC
CGTCGTCCCTGCTGCCGAGAGTAAAGCCCACGATGACGGCGGTGTCGCAG
CCATGGAGGAGCAGGGGGAGGAGAAAGCGGGGGAGGATCATGAAGGGAGT
TGGACGCCGGAGAAGGTGGCAGAGGCTGCAAGGGTTATTCTCGGCGACGA
CAGACAGTTGCAAATCAGACACATACATACGCGACACAAACGATACAAAC
AAAAACACCCCAAACCATGGATGTTCCCAGGGGCCGACCATCAGGAGAAA
GGAAGTCTCTGACGCTGGATGAGAGGAGAAAGGAGCGACGAGCGTCAAGC
GACAGGCGGAAAAGCGGACCGAAGGCAGTAGACGTTTCGAGCCTCCGCGA
CGGGAAGGCGGGTCGGAGGAGGCTGTCGGCAGACCACAGAAGGACAAGCC
GGAGCAACAAGGCGGCCACCCTGCGCCGCGAGCGCGGCCAGCCTCGCCCG
CCCCTTATTGGGCACCGCGGTATCGGCAGAGCTTCTCTTCCCGCCCGGCT
TCCGCGGGCAGCAACGGCCGTCGTCCCTGCTGCCGAGAGTAAAGCCCACG
ATGACGGCGGTGTCGCAGCCATGGAGGAGCAGGGGGAGGAGAAAGCGGGG
GAGGATCATGAAGGGAGTTGGACGCCGGAGAAGGTGGCAGAGGCTGCAAG
GGTTATTCTCGGCGACGACAGACAGTTGCAAATCAGGTCCCTGCGCTGGC
TGCGCGTGGTGCTGAGCGTATCGGAGAATCCTCCCGCCGCCGAGGTTGTC
CAAGCCGGGCTCTTGCCTAGGCTCGTGCAGTTTCTTCGGCAAACAGGTCC
CTGCGCTGGCTGCGCGTGGTGCTGAGCGTATCGGAGAATCCTCCCGCCGC
CGAGGTTGTCCAAGCCGGGCTCTTGCCTAGGCTCGTGCAGTTTCTTCGGC
AAACAGACTGTCCGGACCTGCGCCCCGAGGCCCTGTGCTCCCTGACCAAC
ATCGCCTCCACCAGTTGCACCAAGGCCGTGGCGGCGGAGCCGTCAACCCT
GCCCACGCTCGTGGCCTTGCTCGCCAGCCCCGACCTTCACCTCAGAGAGC
AGACTGTCCGGACCTGCGCCCCGAGGCCCTGTGCTCCCTGACCAACATCG
CCTCCACCAGTTGCACCAAGGCCGTGGCGGCGGAGCCGTCAACCCTGCCC
ACGCTCGTGGCCTTGCTCGCCAGCCCCGACCTTCACCTCAGAGAGCAGAG
CGCGTGGTGCTTGGGAAATATCGCCGCGGATGGCGTCGAGATGCGCGACC
TGGTCCTGAGCGCAGGGGTGTTGGGGCCGCTACTGGCCTGTCTCTCTCCG
CCCCAGCACGGCTCCACATCAACGTCATTCATGAGAGCGCGTGGTGCTTG
GGAAATATCGCCGCGGATGGCGTCGAGATGCGCGACCTGGTCCTGAGCGC
AGGGGTGTTGGGGCCGCTACTGGCCTGTCTCTCTCCGCCCCAGCACGGCT
CCACATCAACGTCATTCATGAGGACGGGCACGTGGGCGCTGAACAACCTC
TGTCGCAGGCTCCCGCCGCCGCCCCTGTCGGCTGTCTTGCCCATCATCGA
CACCCTCCGCCCCGTGATAGAGGCGGCAAACACTGCCGATGCGGAAATTC
TCACGGACGCCGGGACGGGCACGTGGGCGCTGAACAACCTCTGTCGCAGG
CTCCCGCCGCCGCCCCTGTCGGCTGTCTTGCCCATCATCGACACCCTCCG
CCCCGTGATAGAGGCGGCAAACACTGCCGATGCGGAAATTCTCACGGACG
CCGGTTGGGTTCTGTACCACATCACGAGGGGCGGGAGTGACCGCATCGAT
GCCGTGCTGTCCTCGGGGATGCTGTCGATGATGCCGGACGTGATCCTCCA
CGACACCGCTCAGTTGGGTTCTGTACCACATCACGAGGGGCGGGAGTGAC
CGCATCGATGCCGTGCTGTCCTCGGGGATGCTGTCGATGATGCCGGACGT
GATCCTCCACGACACCGCTCAGGTAGTTCGGCCGGCGATCCGTGCGATGG
ACAACATGGCTTGCAGCTCGGCCGCCCATCGAGGAGTAGTTCGGCCGGCG
ATCCGTGCGATGGACAACATGGCTTGCAGCTCGGCCGCCCATCGAGGAGC
GCTTATCGAGGCCGGAGTTCTGGACCCGCTCGTCGAGACCCTCGGACACG
ACAGTGCTAAGGCGCTTATCGAGGCCGGAGTTCTGGACCCGCTCGTCGAG
ACCCTCGGACACGACAGTGCTAAGGTGCGAGCGGATGCGCTCCGGCTGCT
GTCGTGCATCGCGGCAGGCTCTCCCGACCAAGTCACCGTGCGAGCGGATG
CGCTCCGGCTGCTGTCGTGCATCGCGGCAGGCTCTCCCGACCAAGTCACC
back to top