mRNA_L-elsbetiae_contig205.6173.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig205.6173.1
Unique NamemRNA_L-elsbetiae_contig205.6173.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Match: A0A6H5JA52_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA52_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 6.610e-146
Identity = 209/222 (94.14%), Postives = 214/222 (96.40%), Query Frame = 1
Query:    1 MIRLKKKQDDEKAAEAAAAMDVDDGTPSNAAAQPKADEGNTGGKLHVLGIGGRRAKRGSSKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQFERTVKRTLAGTVMQGETFQRLI 666
            MIRLKKKQDDEKAAEAAAAM++D+ TPSNAAAQPKADE    GKLHVLGIGGRRAKRGS+KATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYR+NI QFERTVKRTLAG VM GETFQRLI
Sbjct:    1 MIRLKKKQDDEKAAEAAAAMEIDEETPSNAAAQPKADEEKAAGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 222          
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Match: A0A835YZU8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU8_9STRA)

HSP 1 Score: 294 bits (753), Expect = 4.200e-95
Identity = 141/181 (77.90%), Postives = 156/181 (86.19%), Query Frame = 1
Query:  124 GGKLHVLGIGGRRAKRGSSKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQFERTVKRTLAGTVMQGETFQRLI 666
            GG + +LGIGGRR K+ + KA   KKTPGEIRIQKDIA+LDGG+VA ITFP+PNNL  F+V V PDSG+WKGASY+FTFTIP  YPHDPPKVLC TKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYR NI +F+R V+RTL G  M G+ F RL+
Sbjct:   29 GGGVKLLGIGGRRTKK-TGKAP-PKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207          
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Match: A0A7S3M2N2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2N2_9STRA)

HSP 1 Score: 293 bits (749), Expect = 2.630e-94
Identity = 151/225 (67.11%), Postives = 176/225 (78.22%), Query Frame = 1
Query:    1 MIRLKKKQD---DEKAAEAAAAMDVDDGTPSNAAAQPKADEGNTGGKLHVLGIGGRRAKRGSSKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQFERTVKRTLAGTVMQGETFQRLI 666
            MIR++KK      EK AE  +A  V+  +P N A +PK +EG   G L +LGIGG++ K G+ KA G K+TPGEIRIQKDIA+LDGGSVA++ FPNPN+LT+F V V PDSGFW GA Y FT  IPALYPH+PPKV C TKIYHPNINL+GNVCLNILRE+WKPVLDINAVIYG+IYLFYEPNP+DPLN EAA+LYR +  QFER VKRTL G    GE F+RLI
Sbjct:    1 MIRMQKKPAPVVSEKVAEDESA--VNGNSPVNVAGEPKEEEG--AGGLSLLGIGGKQIKSGAKKA-GKKRTPGEIRIQKDIAELDGGSVAQVDFPNPNDLTNFTVTVSPDSGFWSGAKYVFTVAIPALYPHEPPKVTCRTKIYHPNINLEGNVCLNILREEWKPVLDINAVIYGMIYLFYEPNPDDPLNREAADLYRTDKNQFERVVKRTLQGYSHAGEAFERLI 220          
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Match: A0A6V1TYK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TYK4_HETAK)

HSP 1 Score: 291 bits (745), Expect = 1.540e-93
Identity = 147/232 (63.36%), Postives = 179/232 (77.16%), Query Frame = 1
Query:    1 MIRLKKKQDDEKAAEA----AAAMDVDDGTPSNAAA------QPKADEGNTGGKLHVLGIGGRRAKRGSSKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQFERTVKRTLAGTVMQGETFQRLI 666
            MIRLKKKQ++ +        + AMDV+  + +   A      + K  E  + G + +LGIGG++++ G +K T  K+TPGE+RIQKDIA+LDGG+VA ITFPNPNNLTSF+V+V PD+G W+GA+YHFTF IPA+YPH+PPKV C TKIYHPNINLQG VCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLN EAAELYR +  QFER V+R+L G  +  E F+RLI
Sbjct:    1 MIRLKKKQEEAERXXXXXXXSEAMDVEQESTNGGDAKADDQDESKGGESKSSGGVKLLGIGGKKSRTGGAKKT-KKRTPGELRIQKDIAELDGGNVAVITFPNPNNLTSFEVRVTPDTGMWRGATYHFTFAIPAMYPHEPPKVHCHTKIYHPNINLQGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNREAAELYRNDARQFERVVRRSLQGYSVGAEQFERLI 231          
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Match: B7G8G3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8G3_PHATC)

HSP 1 Score: 287 bits (734), Expect = 4.800e-92
Identity = 143/223 (64.13%), Postives = 173/223 (77.58%), Query Frame = 1
Query:    1 MIRLKKKQDDEKAAEAAAAMDVDDGTPSNAAAQPKADEGNTGGKLHVLGIGGRR-AKRGSSKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQFERTVKRTLAGTVMQGETFQRLI 666
            M+ LKKK+++ KAA  AAA D D  TP   +        N   K+ +LG+GG++  K G  KAT  K++PGEIRIQKDIA+LDGG+VA I FPN N+LTSF V + PDSG+WKGA+YHFTFTIP  YPH PPKV C+TKIYHPNI+LQG VCLNILREDWKPVLDIN V+YGLIYLFYEPNP+DPLNHEAAEL+R+++ QFER V RTL G ++ G  F+RL+
Sbjct:    1 MLALKKKREEAKAAAEAAAKDADADTPIVDSGVGTHSPDNN--KVSLLGVGGKKQTKNGECKAT-KKRSPGEIRIQKDIAELDGGNVATIDFPNANDLTSFHVAISPDSGYWKGATYHFTFTIPPHYPHSPPKVECQTKIYHPNIDLQGKVCLNILREDWKPVLDINGVVYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVSRTLRGGILDGVQFERLV 220          
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Match: A0A7S3KW38_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW38_9STRA)

HSP 1 Score: 280 bits (715), Expect = 2.850e-89
Identity = 130/188 (69.15%), Postives = 159/188 (84.57%), Query Frame = 1
Query:  106 ADEGNTGGKLHVLGIGGRRAKRGSSKATGTKK-TPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQFERTVKRTLAGTVMQGETFQRLI 666
            ADEG++  K+ +LG+GG++ K  +   TG KK TPGEIRIQKDIA+LDGG VA I FPNPN+LT+F V+V PDSG+W+GA+YHF+F +P+ YPH+PPKV C TKIYHPNI+LQG VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAAEL+R+++ QFER V RTL G V+ G  F++L+
Sbjct:   28 ADEGDSN-KVSLLGVGGKKKKNENGSGTGGKKRTPGEIRIQKDIAELDGGKVATIEFPNPNDLTAFDVRVCPDSGYWQGATYHFSFNVPSHYPHEPPKVECHTKIYHPNIDLQGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVNRTLRGGVLDGVQFEKLV 214          
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Match: A0A7R9W2H1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2H1_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.970e-88
Identity = 131/199 (65.83%), Postives = 159/199 (79.90%), Query Frame = 1
Query:   73 GTPSNAAAQPKADEGNTGGKLHVLGIGGRRAK-RGSSKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQFERTVKRTLAGTVMQGETFQRLI 666
            G  S  +  P ++  +   K+ +LGIGG++ K +G + ++  K+TPGEIRIQKDIA+LDGG VA I FPNPN+LT+F V+V PD+GFWKGASY FTF IP  YPH PPKV CETKIYHPNINL+G VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAAEL+R ++ QF+R V RTL+G ++    FQRL+
Sbjct:   63 GASSAISTPPSSEPSSETKKVSILGIGGKKKKDKGENSSSSKKRTPGEIRIQKDIAELDGGKVATIDFPNPNDLTTFHVRVTPDTGFWKGASYLFTFQIPDHYPHSPPKVHCETKIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAAELFRRDVNQFQRLVSRTLSGGILDNVQFQRLV 261          
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Match: A0A1Z5K9J7_FISSO (Ubiquitin-conjugating enzyme E2 M n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9J7_FISSO)

HSP 1 Score: 276 bits (705), Expect = 1.010e-87
Identity = 142/225 (63.11%), Postives = 167/225 (74.22%), Query Frame = 1
Query:    1 MIRLKKKQDDE--KAAEAAAAMDVDDGTPSNAAAQPKADEGNTGGKLHVLGIGGRR-AKRGSSKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQFERTVKRTLAGTVMQGETFQRLI 666
            M+ LKKK++ E  KAAE +        T    A QP+        K+ +LGIGG++  K G S  TG K+TPGEIRIQ DIA+LDGG VA I FPNPN+LT F V V PD+G WKGA+YHFTFTIP  YPH PP+V C TKIYHPNI+LQG VCLNILREDWKPVLDIN+VIYGLIYLFYEPNP+DPLNHEAAEL+R++  QFER V RTL G ++ G  F+RL+
Sbjct:    1 MLALKKKREAEAKKAAEESKQQAEQPTTAEAPADQPR--------KVSLLGIGGKKMVKNGESGMTGKKRTPGEIRIQTDIAELDGGDVATIKFPNPNDLTLFDVSVTPDTGLWKGATYHFTFTIPPHYPHSPPRVECNTKIYHPNIDLQGKVCLNILREDWKPVLDINSVIYGLIYLFYEPNPDDPLNHEAAELFRKDKTQFERLVMRTLRGGILDGVHFERLV 217          
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Match: A0A6T7JLN4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JLN4_9STRA)

HSP 1 Score: 275 bits (703), Expect = 2.400e-87
Identity = 128/190 (67.37%), Postives = 154/190 (81.05%), Query Frame = 1
Query:  100 PKADEGNTGGKLHVLGIGGRR-AKRGSSKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQFERTVKRTLAGTVMQGETFQRLI 666
            P    GN   K+ +LGIGG++ A +G + + G K+TPGEIRIQKDIA+LDGG VA I FPNPN+LT F V + PD+GFWKGA Y FTF IPA YPH+PPKV C T+IYHPNINL+G VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAA+L+R+++ QF R V+RTL G ++ G  F+RL+
Sbjct:   33 PPGAPGNETKKVSLLGIGGKKNASKGENGSGGKKRTPGEIRIQKDIAELDGGKVAIIDFPNPNDLTMFHVAITPDTGFWKGAKYDFTFQIPAHYPHNPPKVTCGTQIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRKDVNQFNRLVQRTLRGGILDGVPFERLV 222          
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Match: A0A448YW25_9STRA (UBC core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW25_9STRA)

HSP 1 Score: 274 bits (701), Expect = 4.190e-87
Identity = 131/197 (66.50%), Postives = 157/197 (79.70%), Query Frame = 1
Query:   79 PSNAAAQPKADEGNTGGKLHVLGIGG-RRAKRGSSKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQFERTVKRTLAGTVMQGETFQRLI 666
            PS +A     +EG  GG++ + GIGG ++ K+G S AT  KKTPGEIRIQKDI +LDGG VAE+TFP PN+LTSF V + PD+G+WKGA Y F F +PA YPH PPKV C+T IYHPNI+LQG VCLNILREDW+PVLDINAVIYGLIYLFYEPNP+DPLNHEAA+L+R++I  FER V RTL G  + G TF+RL+
Sbjct:   26 PSVSAPSESTEEG--GGQVSLFGIGGQKKTKKGESSAT--KKTPGEIRIQKDIGELDGGKVAEVTFPKPNDLTSFNVSITPDTGYWKGARYEFEFKVPAHYPHSPPKVECKTSIYHPNIDLQGKVCLNILREDWRPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRKDIQSFERLVNRTLRGGTLDGVTFERLV 218          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig205.6173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA52_9PHAE6.610e-14694.14UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YZU8_9STRA4.200e-9577.90Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S3M2N2_9STRA2.630e-9467.11Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6V1TYK4_HETAK1.540e-9363.36Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B7G8G3_PHATC4.800e-9264.13Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3KW38_9STRA2.850e-8969.15Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7R9W2H1_9STRA1.970e-8865.83Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A1Z5K9J7_FISSO1.010e-8763.11Ubiquitin-conjugating enzyme E2 M n=2 Tax=Fistulif... [more]
A0A6T7JLN4_9STRA2.400e-8767.37Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A448YW25_9STRA4.190e-8766.50UBC core domain-containing protein n=1 Tax=Pseudo-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig205contigL-elsbetiae_contig205:5792..9205 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score393.3
Seed ortholog evalue7.7e-107
Seed eggNOG ortholog2880.D8LRS2
Preferred nameUBE2M
KEGG rclassRC00005,RC00726,RC00836,RC00837,RC01726
KEGG koko:K00053,ko:K00573,ko:K00698,ko:K10579
KEGG ReactionR02335,R03051,R04439,R04440,R05068,R05069,R05071
KEGG Pathwayko00290,ko00520,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko04120,map00290,map00520,map00770,map01100,map01110,map01130,map01210,map01230,map04120
KEGG ModuleM00019,M00570
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008589,GO:0009719,GO:0009725,GO:0009733,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010646,GO:0010648,GO:0010941,GO:0010942,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019788,GO:0023051,GO:0023057,GO:0031974,GO:0031981,GO:0032446,GO:0036211,GO:0042221,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043523,GO:0043525,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045116,GO:0045879,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0061650,GO:0061654,GO:0065007,GO:0070013,GO:0070647,GO:0071704,GO:0140096,GO:1901214,GO:1901216,GO:1901564
EggNOG free text desc.NEDD8 transferase activity
EggNOG OGsKOG0420@1,KOG0420@2759
EC1.1.1.86,2.1.1.77,2.4.1.16
COG Functional cat.O
CAZyGT2
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko04121
Ec32 ortholog descriptionUbiquitin-conjugating enzyme E2
Ec32 orthologEc-08_002220.1
Exons6
Model size1378
Cds size669
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815844.9374483-UTR-L-elsbetiae_contig205:5791..65001622815844.9374483-UTR-L-elsbetiae_contig205:5791..6500Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig205 5792..6500 -
1691683141.4162707-UTR-L-elsbetiae_contig205:5791..65001691683141.4162707-UTR-L-elsbetiae_contig205:5791..6500Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig205 5792..6500 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815844.9476516-CDS-L-elsbetiae_contig205:6500..66861622815844.9476516-CDS-L-elsbetiae_contig205:6500..6686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 6501..6686 -
1691683141.4303246-CDS-L-elsbetiae_contig205:6500..66861691683141.4303246-CDS-L-elsbetiae_contig205:6500..6686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 6501..6686 -
1622815844.9591396-CDS-L-elsbetiae_contig205:7037..71241622815844.9591396-CDS-L-elsbetiae_contig205:7037..7124Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 7038..7124 -
1691683141.4395535-CDS-L-elsbetiae_contig205:7037..71241691683141.4395535-CDS-L-elsbetiae_contig205:7037..7124Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 7038..7124 -
1622815844.9708207-CDS-L-elsbetiae_contig205:7298..73851622815844.9708207-CDS-L-elsbetiae_contig205:7298..7385Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 7299..7385 -
1691683141.448261-CDS-L-elsbetiae_contig205:7298..73851691683141.448261-CDS-L-elsbetiae_contig205:7298..7385Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 7299..7385 -
1622815844.9820614-CDS-L-elsbetiae_contig205:7679..77591622815844.9820614-CDS-L-elsbetiae_contig205:7679..7759Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 7680..7759 -
1691683141.4572463-CDS-L-elsbetiae_contig205:7679..77591691683141.4572463-CDS-L-elsbetiae_contig205:7679..7759Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 7680..7759 -
1622815844.994235-CDS-L-elsbetiae_contig205:8367..85691622815844.994235-CDS-L-elsbetiae_contig205:8367..8569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 8368..8569 -
1691683141.467055-CDS-L-elsbetiae_contig205:8367..85691691683141.467055-CDS-L-elsbetiae_contig205:8367..8569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 8368..8569 -
1622815845.0068834-CDS-L-elsbetiae_contig205:9178..92051622815845.0068834-CDS-L-elsbetiae_contig205:9178..9205Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 9179..9205 -
1691683141.4782147-CDS-L-elsbetiae_contig205:9178..92051691683141.4782147-CDS-L-elsbetiae_contig205:9178..9205Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig205 9179..9205 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig205.6173.1prot_L-elsbetiae_contig205.6173.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig205 6501..9205 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig205.6173.1

>prot_L-elsbetiae_contig205.6173.1 ID=prot_L-elsbetiae_contig205.6173.1|Name=mRNA_L-elsbetiae_contig205.6173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=223bp
MIRLKKKQDDEKAAEAAAAMDVDDGTPSNAAAQPKADEGNTGGKLHVLGI
GGRRAKRGSSKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSF
KVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNV
CLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRENIGQF
ERTVKRTLAGTVMQGETFQRLI*
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mRNA from alignment at L-elsbetiae_contig205:5792..9205-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig205.6173.1 ID=mRNA_L-elsbetiae_contig205.6173.1|Name=mRNA_L-elsbetiae_contig205.6173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3414bp|location=Sequence derived from alignment at L-elsbetiae_contig205:5792..9205- (Laminarionema elsbetiae ELsaHSoW15)
ATGATCCGACTGAAGAAGAAGCAAGATGTAAGAGCTTGTCTATGCTCATC TTCGAAATTGCTGTGTACAATATCACACACGACAAGAAGTGGGCGCTGCA CACGACTTTCTCTCACCTTGTGTGTTGTACATGGTCGGAGCTGAAACTCC TGTACTGTTGTGTGGGCGTGGACTTGGATTTCCATTTGAGACACAATACT ACATAAGCTATTTATTACGCTTGTTCATTTACGGAAGAACGTACATGTTC TGTGTCTCGCCGGGGAAGCAAATGCAGCAAGATAACTAACTCCTTCTGGA TGATGTGGGTAGAGCCGGGAAATGCCAGGATTGGTCTTGTGTTCGTCTAA CTGAGCTTCGTGTCTTCTTCCTTGTGCCTCCCACGCGCTAGGGCTCAACA CTTCAATATGTAGTACATGATTTCATAATTTCATAATTTCCTCTCCCTTG GTACTCTGCGAACCCCGATCTCCACCGCACTTTCGAATCCTGTGTTCAGC GCGTGTATTGGTTATTCTAAGCAAGTACCGCGTGGCCGGCAACAATAATA TTTAATCTTCACCTATTACAACGCAAGTGAGGAGAGTGTACGCTGAGCTT CTGAGCTGCTCGGATAATGTCTGTCCGTTGGTTCAGGACGAAAAGGCCGC TGAGGCTGCAGCGGCGATGGACGTGGACGATGGCACCCCATCCAACGCAG CTGCTCAACCAAAGGCGGACGAAGGAAATACCGGAGGGAAGCTTCACGTG TTGGGGATTGGAGGCCGAAGGGCCAAGAGAGGAAGCTCGAAGGCAACTGG TACAAAGAAGACACCGGGAGAGATCCGCATTCAGAAGGGTGAGGGAGAGC TGTGCAGCAGGTATCAGGGTCATCTCCCAGAGTGGTGCGGCCGTTTTTCA GCAGTACGATAGGATGGTATATAGACTACGTTGCTTGGTTCATGTCGTTA GAGTATACCTGCATGCGTCAAGTGTGCGTAGACCGCTGTTCTCCCCCTGG TTTCAACGCCTGTGTCTCAGCAAGCTGCTTGTTCGCTGTGAGGGTTCCAG CATGCACACAAAAGAGGCGGGCGACCAGGTTGGCGCTCCAATGCTCTCGG CACGGGTTGACTTGTTCTTGCCCTTCCCGGCGTTTTTCACCGCCCCAGCG TTGAGGGACGCACACATTGCCCTCCGAGAAGGTTGTGTCTCTGCAGCAGA AGACGAATCTCTACTAAATCCAGCCAATTGCGATATACCCCTGGCCGCTC GATTGCTTTGGGCAGGCTGCTGGATGCTGTACTTTACCACAATCAGTAGC CCCACCGGCGGAGGGCGCTCGAACAATGCGTAGCTTCGATGCCCACCTGC ATGCTCAGTGCTACTTGCAGTCCAATTCTAATACCGCCGTTCCTCACTGC TGCTGTGCCGATCCCGAAATCGTTCTGCTCTCGAATTCTGATCCAGATAT TGCGGACTTGGACGGCGGGAGCGTAGCGGAGATTACGTTCCCCAACCCCA ACAACCTCACGTCCTTCAAGGTCAAGGTGAGAACCAAATTGAATGGTCAG TTATTTTCCAGATCGTTAGTGACTTTAGCTTCGTTAGTGGCTTAAGCTTT GAGCCGCATGGCCGGTGTTCATGATAGTCATCTGGGACTGATAGAAGTAC ATGTGATAGAAGTATATATATTATGGCAGTCAAATACTAAATTGAGAACT AGGCAGGGACTACAGCGCGCCCTTTTTCTTTTTTCGCCAGTGTGGTCGTC TCCACCACGTGTGTTGCTGAAGCCCACATATGTCTCCTTACGATTGCCTT TTGGATTATTCGGGCGGCAGGTGCAGCCGGACAGCGGATTCTGGAAGGGC GCGTCGTACCACTTCACCTTCACTATTCCTGCGCTTTATCCGCACGACCC ACCCAAGGTAAGCAGCCTTTCTATTTACAATTCCAGTTTTTTTTTAGAGC CGTTTATTGGACGAGTTAGGTACCAACTCCAAGGAGCCTGCGGATGACAC CGGCGTCTCTCGAGTCCTTTCTACGGCCTGCGAGTTTTTGATTTCTTCGC ACGAATCTCCGCGGCTCTCCGTGGGATGCAGGTACTGTGCGAGACGAAAA TCTACCACCCCAACATCAACCTGCAGGGAAACGTGTGCCTCAACATATTG CGCGAAGACTGGAAGCCGGTGAGTGTTCAGACAGTCGAATTCGTTCCGTT AAGGGGGTGTAGTATCTCGTTTTGTTGTTGGGCAGGCCCCAGGAATCCAT GGAGAAAACAGGTGTTTAGACCTAATTTATTTGATCCCCGAGGTCTGTAG GCGTAACATCCTGCGGAGTTTGCGGTATGGTGCGTAAGCACGTTATTGGA TTGCTTCTAGACCCTCGACAGCACTTTGTACTGGGCGACATTGCCGCAGG GGCGCACGTTGTGTTGCACTCACGAGCGGTGGCAGCCCGCAGCGTTGCCG CAGCCGATGCACTTTCTGTGAATGTTTTGAACGCCAGTGCCACACGCTGT AAACTCTCCTGTCGGGCAGGTGTTGGATATCAACGCGGTCATCTACGGCC TTATCTACCTGTTCTACGAGCCAAACCCCGAGGACCCCCTCAACCACGAG GCCGCAGAGCTCTACCGCGAAAACATAGGCCAATTTGAGCGAACAGTCAA GAGGACGCTTGCTGGAACAGTCATGCAGGGCGAGACCTTCCAGCGGCTGA TATGATTGAGTCGACATTTAGTGTTCTCGCGCTGTTTCCATTTCACGTTC GAGAGCTTTTTGTTGATTAGCGGCTATGTTCGGAAAGACAAGACCGTGCG GTTTGAGCAAAGGTAGCACCTGCTGACTGTGTTGTGTCCGGCGTGGCCGA GGCGTGTTGTCAGTGGTCGATACTGGCGGTGGAGAGCTGGATCTTATCCC TTCTTCGTCGCGCGTGAACTCAACAGCAATAGAGTAGTCGATTTGGGATT TGGTCTTGCATATATCTCGGGTATTTTTTTCGATTAAGTGATACGGAAGC ATTGGGGATCAGTTTCGATCATTATGATCACTCCAAAGTCAGTAATCCCA TCCAGCCAGGCGCACTGGCTTGTTCATTCATTGTTGGGCGCGGCACGTTG TTTCATGCATAGAGTAGCGGCGGGTATTAACAACCACCCGGGTATTAACA ACTACCTAGCTTGCAACACTCATATCTTGCGTTTCTTTTTTGTTTCCTTG TTGCCATGGATCTTGCCGATCATTCAAGCCCGAGTTTGGTCCATTTGGAT TCAAACTTGACCCTCTACAGCATTCGGCGCCAGGGTGATGTACGATATCT CTGTCTTTTTTTTTTTCCGGTGGCCGCCGCTAAGGAATCGGGCAAATATT AGTTCATTAGACCCACAATTCCACCGATGTCATCTCTACTTTTAGCCCAG TGGTGTAGTATGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig205:5792..9205-

>mRNA_L-elsbetiae_contig205.6173.1 ID=mRNA_L-elsbetiae_contig205.6173.1|Name=mRNA_L-elsbetiae_contig205.6173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1338bp|location=Sequence derived from alignment at L-elsbetiae_contig205:5792..9205- (Laminarionema elsbetiae ELsaHSoW15)
ATGATCCGACTGAAGAAGAAGCAAGATATGATCCGACTGAAGAAGAAGCA
AGATGACGAAAAGGCCGCTGAGGCTGCAGCGGCGATGGACGTGGACGATG
GCACCCCATCCAACGCAGCTGCTCAACCAAAGGCGGACGAAGGAAATACC
GGAGGGAAGCTTCACGTGTTGGGGATTGGAGGCCGAAGGGCCAAGAGAGG
AAGCTCGAAGGCAACTGGTACAAAGAAGACACCGGGAGAGATCCGCATTC
AGAAGGGACGAAAAGGCCGCTGAGGCTGCAGCGGCGATGGACGTGGACGA
TGGCACCCCATCCAACGCAGCTGCTCAACCAAAGGCGGACGAAGGAAATA
CCGGAGGGAAGCTTCACGTGTTGGGGATTGGAGGCCGAAGGGCCAAGAGA
GGAAGCTCGAAGGCAACTGGTACAAAGAAGACACCGGGAGAGATCCGCAT
TCAGAAGGATATTGCGGACTTGGACGGCGGGAGCGTAGCGGAGATTACGT
TCCCCAACCCCAACAACCTCACGTCCTTCAAGGTCAAGATATTGCGGACT
TGGACGGCGGGAGCGTAGCGGAGATTACGTTCCCCAACCCCAACAACCTC
ACGTCCTTCAAGGTCAAGGTGCAGCCGGACAGCGGATTCTGGAAGGGCGC
GTCGTACCACTTCACCTTCACTATTCCTGCGCTTTATCCGCACGACCCAC
CCAAGGTGCAGCCGGACAGCGGATTCTGGAAGGGCGCGTCGTACCACTTC
ACCTTCACTATTCCTGCGCTTTATCCGCACGACCCACCCAAGGTACTGTG
CGAGACGAAAATCTACCACCCCAACATCAACCTGCAGGGAAACGTGTGCC
TCAACATATTGCGCGAAGACTGGAAGCCGGTACTGTGCGAGACGAAAATC
TACCACCCCAACATCAACCTGCAGGGAAACGTGTGCCTCAACATATTGCG
CGAAGACTGGAAGCCGGTGTTGGATATCAACGCGGTCATCTACGGCCTTA
TCTACCTGTTCTACGAGCCAAACCCCGAGGACCCCCTCAACCACGAGGCC
GCAGAGCTCTACCGCGAAAACATAGGCCAATTTGAGCGAACAGTCAAGAG
GACGCTTGCTGGAACAGTCATGCAGGGCGAGACCTTCCAGCGGCTGATAT
GAGTGTTGGATATCAACGCGGTCATCTACGGCCTTATCTACCTGTTCTAC
GAGCCAAACCCCGAGGACCCCCTCAACCACGAGGCCGCAGAGCTCTACCG
CGAAAACATAGGCCAATTTGAGCGAACAGTCAAGAGGACGCTTGCTGGAA
CAGTCATGCAGGGCGAGACCTTCCAGCGGCTGATATGA
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