mRNA_L-elsbetiae_contig20469.6166.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Match: D7G4Z1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z1_ECTSI) HSP 1 Score: 139 bits (349), Expect = 2.050e-38 Identity = 84/130 (64.62%), Postives = 92/130 (70.77%), Query Frame = 2 Query: 2 ATATTEGVQVATIVSGAGSSRSGEPASVVVAAVDNPHTNGSGXXXXXXXXXGKDSKKQTVGLIR----GRGKKGSVIPVALYRQPNARYTLVYSHGNATDIGAMHDRCSGIAEAVGVNVLVYDYTGYGRA 379 ATATTEGV++ATIVSG S+ GEP V+ AV NP+ G XXXXX G + G G +GS IPVALYR NARYTLVYSHGNATDIGAMHDRC+GIAEAVGVNVL YDYTGYGRA Sbjct: 9 ATATTEGVEIATIVSGVSGSQCGEP---VLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRA 135
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Match: A0A6H5KNT2_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNT2_9PHAE) HSP 1 Score: 136 bits (343), Expect = 7.890e-36 Identity = 90/136 (66.18%), Postives = 98/136 (72.06%), Query Frame = 2 Query: 2 ATATTEGVQVATIVSGAGSSRSGEPASVVVAAVDNPHTNG------SGXXXXXXXXXGKDSKKQTVGLIR----GRGKKGSVIPVALYRQPNARYTLVYSHGNATDIGAMHDRCSGIAEAVGVNVLVYDYTGYGRA 379 ATATTEGV++ATIVSG SR GEP V+AAV NP G +GXXXXXXXXX G + G G +GS IPVALYR NARYTL+YSHGNATDIGAMHDRC+GIAEAVGVNVL YDYTGYGRA Sbjct: 57 ATATTEGVEIATIVSGVSGSRCGEP---VLAAVANPKPKGKRNSKAAGXXXXXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLIYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRA 189
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Match: A0A7S2XWM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM1_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 4.780e-17 Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 2 Query: 185 LIRGRGKKGSVIPVALYRQPNARYTLVYSHGNATDIGAMHDRCSGIAEAVGVNVLVYDYTGYGRA 379 ++ R +K IPV LYR NA+YTL++SHGNATD+GAMHDR G+A ++ +N++ YDYTGYG + Sbjct: 67 IVTTRRRKN--IPVVLYRYRNAKYTLIFSHGNATDLGAMHDRFVGLAMSLQINIVGYDYTGYGHS 129
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Match: A0A6S9I0E5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9I0E5_HETAK) HSP 1 Score: 78.2 bits (191), Expect = 1.260e-14 Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 2 Query: 173 QTVGLIRGRGKKGSVIPVALYRQPNARYTLVYSHGNATDIGAMHDRCSGIAEAVGVNVLVYDYTGYGRA 379 QT+ ++ R KK VI LYR A T+VYSHGNATD+GAMHDR G+A + VNVL YDYTGYG++ Sbjct: 64 QTI-ILNTRRKK--VITAVLYRAEGASKTIVYSHGNATDLGAMHDRYVGLATILKVNVLAYDYTGYGQS 129
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Match: A0A835YXY1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXY1_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.710e-14 Identity = 32/63 (50.79%), Postives = 48/63 (76.19%), Query Frame = 2 Query: 185 LIRGRGKKGSVIPVALYRQPNARYTLVYSHGNATDIGAMHDRCSGIAEAVGVNVLVYDYTGYG 373 +++ + ++ + V Y+ P ARYTL++SHGNATD+GAMHDR G+ + +GV+V+ YDYTGYG Sbjct: 70 VVKVKTRRKKTVVVLWYKSPYARYTLLHSHGNATDLGAMHDRYVGLVQNLGVSVVAYDYTGYG 132
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Match: A0A024U4X5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4X5_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 5.590e-12 Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 Query: 176 TVGLIRGRGKKGSVIPVALYRQPNARYTLVYSHGNATDIGAMHDRCSGIAEAVGVNVLVYDYTGYGRA 379 T L R K+G IP ++R P A +T++YSHGNATD G M R ++ + VNV+ YDYTGYG A Sbjct: 60 TASLAVVRTKRGQEIPCFVFRHPEATFTMIYSHGNATDCGGMFLRYLSLSRELKVNVVGYDYTGYGGA 127
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Match: A0A7S3H8Y9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8Y9_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 9.310e-12 Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 164 SKKQTVGLIRGRGKKGSVIPVALYRQPNARYTLVYSHGNATDIGAMHDRCSGIAEAVGVNVLVYDYTGYG 373 S+ V L+ R K + IPV + PNA+YT++YSHGNATD GAM I+E + VNV+ YDYTGYG Sbjct: 60 SQNIKVELLTSRTK--TKIPVVVLTHPNAKYTIIYSHGNATDCGAMLPMYKMISEFLKVNVVGYDYTGYG 127
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Match: A0A024U6Q3_9STRA (Hydrolase_4 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6Q3_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.020e-11 Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 2 Query: 176 TVGLIRGRGKKGSVIPVALYRQPNARYTLVYSHGNATDIGAMHDRCSGIAEAVGVNVLVYDYTGYGRA 379 T L R K+G IP ++R P A +T++YSHGNATD G M R ++ + VNV+ YDYTGYG A Sbjct: 60 TASLAVVRTKRGQEIPCFVFRHPEATFTMIYSHGNATDCGGMFLRYLSLSRELKVNVVGYDYTGYGGA 127
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Match: A0A067CL46_SAPPC (Hydrolase_4 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CL46_SAPPC) HSP 1 Score: 69.7 bits (169), Expect = 1.520e-11 Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 2 Query: 203 KKGSVIPVALYRQPNARYTLVYSHGNATDIGAMHDRCSGIAEAVGVNVLVYDYTGYGRA 379 + G+ +P ++R P A +TL++SHGNATD GAM+ R ++ + VNV+ YDY+GYG A Sbjct: 75 RPGNEVPCFVFRYPEAEFTLIFSHGNATDCGAMYSRYIALSRELAVNVVAYDYSGYGAA 133
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Match: A0A1V9ZDL9_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDL9_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.520e-11 Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 2 Query: 209 GSVIPVALYRQPNARYTLVYSHGNATDIGAMHDRCSGIAEAVGVNVLVYDYTGYGRA 379 G+ IP ++R P A +TL++SHGNATD GAM+ R ++ + VNV+ YDY+GYG A Sbjct: 77 GNEIPCFVFRYPEAEFTLIFSHGNATDCGAMYSRYLALSRELSVNVVAYDYSGYGAA 133 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20469.6166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig20469.6166.1 >prot_L-elsbetiae_contig20469.6166.1 ID=prot_L-elsbetiae_contig20469.6166.1|Name=mRNA_L-elsbetiae_contig20469.6166.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=133bp GDSDHRGRPGSDDSLRGGQQPQRGAGIGGRGSGRQPPHQRQRQQRRRRRRback to top mRNA from alignment at L-elsbetiae_contig20469:23..421+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig20469.6166.1 ID=mRNA_L-elsbetiae_contig20469.6166.1|Name=mRNA_L-elsbetiae_contig20469.6166.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=399bp|location=Sequence derived from alignment at L-elsbetiae_contig20469:23..421+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig20469:23..421+ >mRNA_L-elsbetiae_contig20469.6166.1 ID=mRNA_L-elsbetiae_contig20469.6166.1|Name=mRNA_L-elsbetiae_contig20469.6166.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=798bp|location=Sequence derived from alignment at L-elsbetiae_contig20469:23..421+ (Laminarionema elsbetiae ELsaHSoW15)back to top |