mRNA_L-elsbetiae_contig20440.6158.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig20440.6158.1
Unique NamemRNA_L-elsbetiae_contig20440.6158.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Match: A0A6H5JI16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI16_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 5.460e-144
Identity = 239/377 (63.40%), Postives = 291/377 (77.19%), Query Frame = 1
Query:   34 LGNLCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRRSMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALAARDLDSLLVPLPP-PEEGYEDGEDW-WIEGEEDEWKETISDAQASRVWYQGWSALQVLKEEHTRDQQQLQLTVEAKALSDLDLPTKDAVEKADAQRFALLDEASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGVHERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIGDLSRLLAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRGGYVEKKRKYALRQAVWVRVRRASLTPEERKRLDDIKAEA 1158
            LG L AV+E++FKRQR+ GSD TRA F  +S LS R+RRS+ RGW KR+ + RR FDKRGSYLGNRI EL S + SN QHI+RIE A+A +DL SLL PLPP P EG  D +     EGE++++KE +S  QA+R+WYQG SAL VLKEE  RD +QL+LT +AK+LSD    T  AV+ A+A+RF LL+EASR RHESSLLRI A V +AG+R  A ST+L W+RDFR  GGFKRD+R VHERDWIMS+EDL+ EL+ WMR Q RLTVK V+ YIN +LFANEIGDLSRLL++QV LPVSM TT +W+ ALGCKY+RA KS+YTD HEK+ VV  RG Y++ KRK ALRQ +WVRV+R +LTPEE +RLD IK  A
Sbjct:   11 LGKLNAVEERKFKRQRLAGSDATRAGFTQESTLSRRERRSVARGWSKRQGKFRRDFDKRGSYLGNRIYELTSQIESNEQHIRRIEEAMAEQDLASLLAPLPPSPIEGNADVDARACTEGEDNQYKEEVSATQANRLWYQGHSALTVLKEERKRDLRQLELTQQAKSLSDESYTTIPAVKAAEAKRFELLNEASRRRHESSLLRIAARVNSAGSRVYAASTVLGWLRDFRGHGGFKRDSRRVHERDWIMSKEDLKDELIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSHQVNLPVSMVTTHSWIIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPA 387          
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Match: A0A6H5JUI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI4_9PHAE)

HSP 1 Score: 420 bits (1080), Expect = 1.530e-136
Identity = 240/385 (62.34%), Postives = 285/385 (74.03%), Query Frame = 1
Query:   10 HTGKPVNSLGNLCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRRSMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALAARDLDSLLVPLPP-PEEGYEDGEDW-WIEGEEDEWKETISDAQASRVWYQGWSALQVLKEEHTRDQQQLQLTVEAKALSDLDLPTKDAVEKADAQRFALLDEASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGVHERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIGDLSRLLAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRGGYVEKKRKYALRQAVWVRVRRASLTPEERKRLDDIKAEA 1158
            HTGK  NSLG L AV+E+ FKRQR+ GSD TRA F  +S LS R+RRS+ RGW KRE +LRR FDKRGSYLGNRI EL S + SN QHI+RIE A+A +DL SLL PLPP P EG  D +     EGE+++ KE +S  QA+R+WYQG SAL VLKEE  RD +QLQLT +AK+LSD    T  AV+ A+A+RF +L EASR RHESSLLRI A V +AG+R  A STIL W+RDFR  GGFKRD+RGVHERDWIMSEEDL+ EL+ WMR+Q RLTVK V+ YIN +LFANEIGDLSRLL+YQV LPVSM+TT +W+ ALGCK               + VV  RG Y++ KRK ALRQ +WVRV+R +LTPEE +RLD IK  A
Sbjct:  118 HTGKSRNSLGKLNAVEERNFKRQRLAGSDATRAGFTLESTLSRRERRSVARGWSKREGKLRRDFDKRGSYLGNRIYELTSQIGSNEQHIRRIEDAMAEQDLASLLAPLPPSPIEGNADVDARACTEGEDNQSKEEVSATQANRLWYQGHSALTVLKEERKRDLRQLQLTQQAKSLSDESYTTIPAVKAAEAKRFEVLIEASRRRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWIIALGCK---------------KDVVVCRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPA 487          
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE)

HSP 1 Score: 420 bits (1080), Expect = 4.430e-134
Identity = 246/435 (56.55%), Postives = 297/435 (68.28%), Query Frame = 1
Query:   16 GKPVNSLGNLCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRRSMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALAARDLDSLLVPLPP-PEEGYEDGEDW-WIEGEEDEWKETISDAQASRVWYQGWSALQVLKEEHTRDQQQLQLTVEAKALSD----------------------------------------------------LDLPTKDAVEKADAQRFALLDEASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGVHERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIGDLSRLLAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRGGYVEKKRKYALRQAVWVRVRRASLTPEERKRLDDIKAEA 1158
            GK  NSLG L AV+E+ FKRQR+ GSD TRA F  +S LS R+RRS+ RGW KRE +LRR FDKRGSYLGNRI EL S + SN QHI+RIE A+A +DL SLL PLPP P EG  + +     EGE++++KE +S  QA+R+WYQG SAL VLKEE  RD +QL+LT +AK+LSD                                                    L   T  AV+ A+A+RF LL+EASR+RHESSLLRI A V +AG+R  A STIL W+RDFR  GGFKRD+RGVHERDWIMSEED + EL+ WMR Q RLTVK V+ YIN +LFAN+IGDLSRLL+YQV LPVSM+TT +WM ALGCKY+RA KS+YTD HEK+ VV  RG Y++ KRK AL Q +WVRV+R +LTP+E +RLD IK  A
Sbjct:  110 GKSRNSLGKLNAVEERNFKRQRLAGSDATRAGFTLESTLSRRERRSVARGWSKREGKLRRDFDKRGSYLGNRIYELTSQIESNEQHIRRIEEAMAEQDLASLLAPLPPSPIEGNAEVDARACTEGEDNQYKEEVSATQANRLWYQGHSALTVLKEERKRDLRQLELTQQAKSLSDESYTTIPAVKAAEAKRFELLNEASRRRHESSLLRIAARVNSAGSRVYAASTILVXTTIPAVKAAEAKRFDLLNEASRLRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDPKDELIKWMRTQKRLTVKDVQNYINQWLFANQIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALWQPLWVRVQRDTLTPKELQRLDGIKGPA 544          
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 2.530e-123
Identity = 212/383 (55.35%), Postives = 279/383 (72.85%), Query Frame = 1
Query:   16 GKPVNSLGNLCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRRSMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALAARDLDSLLVPLPPP--EEGYEDGEDWWIEGEEDEWKETISDAQASRVWYQGWSALQVLKEEHTRDQQQLQLTVEA-KALSDLDLPTKDAVEKADAQRFALLDEASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGVHERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIG-DLSRLLAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRGGYVEKKRKYALRQAVWVRVRRASLTPEERKRLDDIKA 1152
            GK +NSLG +   QE++FKRQR  GSD TRAEFA   ML+SR++RS++RGW +R+ +LR+AFD+RG+YLG RI +L +++A+N QHIKR++ AL    L SLL+PLP P  E+G   G+  W E      +E +++ Q  R+W Q +S+L+VLKEE  RD +QL+LT +A + LS     T  AV++ADA+RF LL+EAS +RHE+SLLR+ A V  +  +  A STIL W+RDFRK GGF+RDARG HE DWIMSEEDL+  LL WM  Q R T+K+V +YING L  ++   DLSRL AYQV LPVSMST  +WM  LGC+Y+R  KS+YTDTHEK+ VV+ RG Y+EK+RK ALRQ +WVRV+RA+L  EE  RLD +K+
Sbjct:   45 GKSLNSLGIIGRPQERQFKRQRRAGSDATRAEFAMQQMLTSREKRSIERGWRRRDRKLRKAFDQRGAYLGGRIKDLTANVAANEQHIKRLQDALRTGHLPSLLLPLPLPSVEDGENAGDRTWAEDTGKPPEEKVAEKQIIRLWQQAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKEVCKYINGPLLQDDKEEDLSRLHAYQVNLPVSMSTMHSWMIRLGCRYERGTKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKS 427          
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Match: A0A6H5JMT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT5_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 3.680e-123
Identity = 223/382 (58.38%), Postives = 271/382 (70.94%), Query Frame = 1
Query:   19 KPVNSLGNLCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRRSMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALAARDLDSLLVPLPP-PEEGYEDGEDW-WIEGEEDEWKETISDAQASRVWYQGWSALQVLKEEHTRDQQQLQLTVEAKALSDLDLPTKDAVEKADAQRFALLDEASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGVHERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIGDLSRLLAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRGGYVEKKRKYALRQAVWVRVRRASLTPEERKRLDDIKAEA 1158
            K  +SLG L AV+E+ FKRQR+ GSD TRA F  +S LS R+RRS++                                 SN QHI+RIE A+A +DL SLL PLPP P EG  + +     EGE++++KE +S  QA+R+WYQG SAL VLKEE  RD +QLQLT +AK+LSD    T  AV+ A+A+RF LL+EASR+RHESSLLRI A V +AG+R  A STIL W+RDFR  GG KRD+RGVHERDWIMSEEDL+ EL+ WMR Q RLTVK V+ YIN +LFANEIGDLSRLL+YQV LPVSM+TT +WM ALGCKY+RA KS+YTD HEK+ VV  RG Y++ KRK ALRQ +WVRV+R +LTPEE +RLD IK  A
Sbjct:   81 KSRDSLGKLNAVEERNFKRQRLAGSDATRAGFTPESTLSRRERRSIE---------------------------------SNEQHIRRIEDAMAEQDLASLLAPLPPSPIEGNAEVDARACTEGEDNQYKEEVSATQANRLWYQGHSALTVLKEERKRDLRQLQLTQQAKSLSDESYTTIPAVKAAEAKRFELLNEASRLRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGGSKRDSRGVHERDWIMSEEDLKDELVMWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPA 429          
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 8.050e-122
Identity = 212/382 (55.50%), Postives = 277/382 (72.51%), Query Frame = 1
Query:   16 GKPVNSLGNLCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRRSMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALAARDLDSLLVPLPPP--EEGYEDGEDWWIEGEEDEWKETISDAQASRVWYQGWSALQVLKEEHTRDQQQLQLTVEA-KALSDLDLPTKDAVEKADAQRFALLDEASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGVHERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIGDLSRLLAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRGGYVEKKRKYALRQAVWVRVRRASLTPEERKRLDDIKA 1152
            GK +NSLG +   QE++FKRQR  GSD TRAEFA   ML+SR++RSM+RGW +R+ +LR+AFD+RG+YLG RI +L +++ +N QHIKR++       L SLL+PLP P  E+G   G+  W E      +E +++ Q  R+W Q +S+L+VLKEE  RD +QL+LT +A + LS     T  AV++ADA+RF LL+EAS +RHE+SLLR+ A V  +  +  A STIL W+RDFRK GGF+RDARG HE DWIMSEEDL+  LL WM  Q R T+K V +YING L  ++  DLSRL AYQV LPVSMSTT +WM  LGC+Y+RA KS+YTDTHEK+ VV+ RG Y+EK+RK ALRQ +WVRV+RA+L  EE  RLD +K+
Sbjct:   92 GKSLNSLGIIGRPQERQFKRQRRAGSDATRAEFAMQQMLTSREKRSMERGWRRRDRKLRKAFDQRGAYLGGRIKDLTANVVANEQHIKRLQDTPRTGHLPSLLLPLPLPSVEDGENAGDRTWAEDTGKPPEEKVAEKQIIRLWQQAYSSLEVLKEERERDVKQLELTRKANEVLSGCKHATDAAVKEADAERFDLLNEASLVRHEASLLRMAAKVAGSSPQAYAPSTILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKDVCKYINGPLLQDDKEDLSRLHAYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQPLWVRVQRAALKQEEVDRLDSLKS 473          
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 4.490e-118
Identity = 231/456 (50.66%), Postives = 277/456 (60.75%), Query Frame = 1
Query:   31 SLGNLCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRRSMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALAARDLDSLLVPLPP-PEEGYED--------GED---------------WW--------------------------------------------------------IEGEEDEWKETISDAQASRVWYQGWSALQVLKEEHTRDQQQLQLTVEAKALSDLDLPTKDAVEKADAQRFALLDEASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGVHERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIGDLSRLLAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRGGYVEKKRKYALRQAVWVRVRRASLTPEERKRLDDIKAEA 1158
            SLG L AV+E++FKRQR+ GSD TRA F  +S LS R+RRS+ RGW KRE +LRR FDKRGSYLGNRI EL S + SN QHI+RIE A+A +DL +LL PLPP P EG  D        GED               W+                                                         EGE++++KE +S  QA+R+WYQG SAL VLKEE  RD +QLQLT +AK+LSD    T  AV+ A+A+RF LL+EASR+RHESSLLRI A V +AG+R  A STIL W+RDFR  GGFKRD+RGVHERDWIMSEEDL+ EL+ WMR Q RLT K                         V LPVSM+TT +WM ALGCKY+RA KS+YTD HEK+ VV  RG Y++ KRK ALRQ +WVRV+R +LTPEE +RLD IK  A
Sbjct:  103 SLGKLNAVEERKFKRQRLAGSDATRAGFTLESTLSRRERRSVARGWSKREGKLRRDFDKRGSYLGNRIYELTSQIESNEQHIRRIEEAMAEQDLANLLAPLPPSPIEGNADVDARACTEGEDNQYKEEVSATQANRLWYQGHSALTVLKEERKHDLXQHIRRIEEAMAEQDLANLLAPLPPSPIEGNADVDARACTEGEDNQYKEEVSATQANRLWYQGHSALTVLKEERKRDLRQLQLTQQAKSLSDESYTTIPAVKAAEAKRFELLNEASRLRHESSLLRIAARVNSAGSRVYAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTAK------------------------DVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLTPEELQRLDGIKGPA 534          
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Match: A0A6H5JUX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX8_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 4.770e-115
Identity = 215/386 (55.70%), Postives = 264/386 (68.39%), Query Frame = 1
Query:   34 LGNLCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRRSMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALAARDLDSLLVPLPP-PEEGYEDGEDW-WIEGEEDEWKETISDAQASRVWYQGWSALQVLKEEHTRDQQQLQLTVEAKALSDLDLPTKDAVEKADAQRFALLDEASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGVHERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIGDLSRLLAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRGGYVEKKRKYALRQAVWVRVRRASLTPEERKRLDDIKAEAATVSDEKNV 1185
            LG L AV+E++FKR R+ GSD TRA F   S LS R+R  + R W KRE +LRR FDKRGSYLGNRI EL S   SN QHI+RIE A+A +DL SLL PLPP P EG  D +     EGE++++KE +S  QA+R+WYQG SAL VLKEE  RD +QL+LT +AKALSD    T  AV+ A+A+RF LL+EASR  H+SS LRI A V +AG+R  A STIL W+RD R  GGFKRD+RGVHE DWIMSEEDL+ EL+ WMR Q RLTV                            LPVSM+TT +WM ALGCKY+RA KS+YTD HEK+ VV  RG Y++ KRK ALRQ +WVRV+R +L PEE +RLD IK +   +  ++++
Sbjct:  109 LGKLNAVEERKFKRLRLAGSDATRAGFTLKSTLSRRERCLVARVWSKREGKLRRDFDKRGSYLGNRIYELTSRSESNEQHIRRIEAAMAEQDLASLLAPLPPSPIEGNADVDARACTEGEDNQYKEEVSATQANRLWYQGHSALTVLKEERKRDLRQLELTQQAKALSDEPYTTIPAVKAAEAKRFELLNEASRRPHQSSRLRIAARVNSAGSRVYAASTILGWLRDLRGHGGFKRDSRGVHEWDWIMSEEDLKDELIKWMRTQKRLTVN---------------------------LPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLWVRVQRDTLLPEELQRLDGIKGKVRHIGQDESL 467          
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 7.930e-114
Identity = 218/381 (57.22%), Postives = 263/381 (69.03%), Query Frame = 1
Query:   43 LCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRRSMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALAARDLDSLLVPLPPPEEGYEDGEDWWIEGEEDEWKETISDAQASRVWYQGWSALQVLKEEHTRDQQQLQLTVEAKALSDLDLPTKDAVEKADAQRFALLDEASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGVHERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIGDLSRLLAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRGGYVEKKRKYALRQAVWVRVRRASLTPEERKRLDDIKAEAATVSDEKNV 1185
            L AV+E++FKRQR+ GSD TRA F  ++ LS R+RRS+ RGW KR+ RLRR FDKRGSYLGNRI EL S + SN  HI+RIE A+A +    +  PL PP    E               +T +  +  R      SAL VLK E  RD +QL+L  +AK+LSD    T  AV+ A+A+R  LL+EA R RHESSL RI A V +AG R  A STIL W+RDFR  GGFKRD+RGVHERDWIMSEEDL+ EL+ WMR Q RLTVK V+ YIN +LFA EIGDLSRLL+YQV LPVSM+TT +WM ALGCKY+RA KS+YTD HEK+ VV  RG Y++ KRK ALRQ + VRV+R +LTPEE +RLD IK  A     E N+
Sbjct:   11 LNAVEERKFKRQRLAGSDATRAGFTLETTLSRRERRSVARGWSKRKGRLRRDFDKRGSYLGNRIYELTSQIESNEHHIRRIEEAMAEQ-TSRVFSPLSPPRPSKE--------------MQTWTHGRVPRARTTRHSALTVLKVERKRDLRQLELAQQAKSLSDESYTTIPAVKAAEAKRLELLNEALRRRHESSLWRIAARVNSAGLRVYAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTVKDVQNYINQWLFAYEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQPLRVRVQRYTLTPEELQRLDGIKGPAEDFCAEVNL 376          
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 3.570e-110
Identity = 206/348 (59.20%), Postives = 246/348 (70.69%), Query Frame = 1
Query:    4 TCHTGKPVNSLGNLCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRRSMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALAARDLDSLLVPLPP-PEEGYEDGEDW-WIEGEEDEWKETISDAQASRVWYQGWSALQVLKEEHTRDQQQLQLTVEAKALSDLDLPTKDAVEKADAQRFALLDEASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGVHERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIGDLSRLLAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRG 1041
            T H  K  NSLG L AV+E++FKRQR+ GSD T A    DS LS R+R S+ RGW  RE +LRR FDKRGSYLGNRI    S + SN QHI+RIE A+A +DL SLL PLPP P E  ED +   + EGE++++KE                      EE  RD +QL+LT +AK+LSD    T  AV+ A+A+RF LL EASR RHESSLL+I A V +AG+R  A STIL W+RDFR  GGFKRD+RGVHERDWIMSEEDL+ +L+ WMR Q RLTVK V+ YIN +LFANEIGDLSRLL+YQV LPVSM+TT +WM ALGCKY+RA KS+YTD HEK+ VV  RG
Sbjct:  114 TLHMRKSRNSLGKLNAVEERKFKRQRLAGSDATSAGLTLDSTLSRRERYSVARGWSNREGKLRRDFDKRGSYLGNRIYVQTSQIESNEQHIRRIEEAMAEQDLASLLAPLPPSPIERNEDVDARAYTEGEDNQYKE----------------------EERKRDLRQLELTQQAKSLSDESYMTIPAVKAAEAKRFELLIEASRPRHESSLLQIAARVNSAGSRVYAASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDQLIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSYQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRG 439          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20440.6158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JI16_9PHAE5.460e-14463.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUI4_9PHAE1.530e-13662.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7P7_9PHAE4.430e-13456.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMQ7_9PHAE2.530e-12355.35Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JMT5_9PHAE3.680e-12358.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L611_9PHAE8.050e-12255.50Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2T4_9PHAE4.490e-11850.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX8_9PHAE4.770e-11555.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J4M4_9PHAE7.930e-11457.22Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JVN6_9PHAE3.570e-11059.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20440contigL-elsbetiae_contig20440:107..2530 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-20_001660.1
Exons2
Model size1338
Cds size1338
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815843.32861-CDS-L-elsbetiae_contig20440:106..12621622815843.32861-CDS-L-elsbetiae_contig20440:106..1262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig20440 107..1262 +
1691683140.2610366-CDS-L-elsbetiae_contig20440:106..12621691683140.2610366-CDS-L-elsbetiae_contig20440:106..1262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig20440 107..1262 +
1622815843.3438637-CDS-L-elsbetiae_contig20440:2348..25301622815843.3438637-CDS-L-elsbetiae_contig20440:2348..2530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig20440 2349..2530 +
1691683140.274799-CDS-L-elsbetiae_contig20440:2348..25301691683140.274799-CDS-L-elsbetiae_contig20440:2348..2530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig20440 2349..2530 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20440.6158.1prot_L-elsbetiae_contig20440.6158.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig20440 107..2530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig20440.6158.1

>prot_L-elsbetiae_contig20440.6158.1 ID=prot_L-elsbetiae_contig20440.6158.1|Name=mRNA_L-elsbetiae_contig20440.6158.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=446bp
MTCHTGKPVNSLGNLCAVQEKEFKRQRVDGSDKTRAEFAHDSMLSSRQRR
SMKRGWGKREARLRRAFDKRGSYLGNRIDELKSSLASNAQHIKRIEGALA
ARDLDSLLVPLPPPEEGYEDGEDWWIEGEEDEWKETISDAQASRVWYQGW
SALQVLKEEHTRDQQQLQLTVEAKALSDLDLPTKDAVEKADAQRFALLDE
ASRIRHESSLLRIGANVLAAGTRGCAVSTILAWVRDFRKLGGFKRDARGV
HERDWIMSEEDLQHELLTWMRKQGRLTVKKVREYINGFLFANEIGDLSRL
LAYQVTLPVSMSTTLAWMKALGCKYKRADKSYYTDTHEKEAVVKDRGGYV
EKKRKYALRQAVWVRVRRASLTPEERKRLDDIKAEAATVSDEKNVELVLQ
ALPDFKNERTALQHIVGSRGHILLLSPKCHPEVAGVGIEYSWGYSK
back to top

mRNA from alignment at L-elsbetiae_contig20440:107..2530+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig20440.6158.1 ID=mRNA_L-elsbetiae_contig20440.6158.1|Name=mRNA_L-elsbetiae_contig20440.6158.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2424bp|location=Sequence derived from alignment at L-elsbetiae_contig20440:107..2530+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACGTGTCACACAGGGAAACCAGTCAACAGCCTCGGGAACCTCTGTGC CGTGCAAGAGAAAGAGTTCAAGCGACAGCGGGTAGATGGCTCAGACAAGA CGCGCGCCGAGTTTGCGCATGACTCCATGCTCTCCAGCCGCCAACGGCGT TCGATGAAGCGGGGGTGGGGCAAGAGAGAAGCGAGACTTCGAAGGGCATT CGACAAACGTGGTTCCTACCTCGGCAACCGGATCGACGAGCTGAAGTCAA GCCTCGCTTCCAACGCGCAACACATCAAGCGGATCGAGGGTGCCCTCGCG GCGCGAGACCTCGACAGCCTTCTCGTCCCCCTCCCACCTCCCGAGGAAGG ATACGAGGACGGTGAAGATTGGTGGATCGAGGGCGAGGAGGACGAGTGGA AGGAGACAATATCCGACGCGCAGGCAAGCCGGGTGTGGTACCAAGGGTGG TCGGCGCTGCAGGTGCTGAAAGAGGAGCATACGCGCGACCAACAGCAGCT GCAGCTTACGGTGGAGGCGAAGGCGTTGTCGGACCTCGATCTTCCGACGA AGGATGCCGTGGAGAAGGCCGATGCCCAACGTTTTGCCCTGCTGGACGAG GCGTCGCGTATTCGACACGAATCGTCGCTCCTGCGGATCGGGGCGAACGT GCTAGCCGCCGGCACGCGGGGTTGCGCGGTATCGACGATCCTGGCGTGGG TCAGGGACTTTCGGAAGCTCGGTGGTTTCAAGCGAGATGCCCGGGGTGTC CATGAGAGGGACTGGATCATGTCCGAGGAGGACCTGCAGCATGAGCTCCT CACGTGGATGAGGAAGCAGGGGCGTCTCACCGTCAAGAAGGTCCGCGAAT ACATCAACGGCTTCTTGTTCGCCAACGAGATCGGAGACCTGTCCAGACTC CTTGCATACCAGGTGACCCTTCCCGTCTCGATGTCCACCACCCTCGCGTG GATGAAAGCTTTGGGGTGCAAGTACAAGCGAGCTGATAAGTCGTACTACA CAGACACCCATGAGAAGGAGGCGGTAGTCAAGGACCGCGGCGGGTACGTA GAGAAGAAGCGCAAGTACGCGCTGCGTCAAGCGGTGTGGGTGCGAGTGCG ACGGGCCAGTCTGACGCCGGAGGAGAGGAAGCGGCTCGACGACATCAAGG CAGAAGGTCCGGAGGGAGACCCCACGGCAGAAGTCTACGACTGCTTGGTC GACGGGCACGCGTGCGTCGAGTTCCACGTCGACTTCCTGCGAGACGGCGG CTCCGTCGAAAACTTCGACGCTCTCCGCAAGAAGCTTGGTCAGGAGGGTG GACACTACAGCGTCCGCTTCAATGACGCTGCTGCTGCTCCCTGCGAGGAA TTCCACCCGCCGGACAAGTGATAATGCAACAGGAGGGTGCGCCACACCGG GCAGGATGAGAGCTGCTACAAGGCATATGCACGCGAGGGCAACGAGTGGG TGATTCGCGGGGTGAGCGGGTTGCGGAAGAAAACGGAGGGCCCGGGGGAG ATGGTGTCAGCGTTCCAGGATGAGAGACGCGGGTTCGGCTTGCCCATCTC GGACACCGTGCTCGAGAAGGTGAACACCAGCCGCGAGAAGCAAGGCAAGA CACTCCTGACGCGCAGCCCCGGCAAACGGTTTCTCGACTACGGCAAAAAC AAGGACGGGTACTGGAACTACGAGATGTTCAAAGACCAGGTCGAGGACGT GTTGGACGTCTTGGAGATCCTCGAACCCGACATGCAAGTGGTCATGGAGA TCGACCACTCTTCGGGGCATGCGTAGCAGCGCGAGGACGGTTTGCACGTA ACGAACATGAATGTCAAGTTCGGAGGGAAGCAAAGGGTGTTGCGCGACTC GGTCATGACCGATGGGTGCTTGGGTCCGGAGGAGGCAAAAATGTATTTAG CCAACGGCGAGTGGAGCACCGAGTTCAGCGAGGGGGCGGTGTGCGTCGAC CAGAAACTGAAGATAGGCGACACCCAAACGAGCACGTTTGCGGTAGGCGC GCCTCCTCCGTTTTACGACTGGCACGCCCCGCGCAAAGACACCAAGGTCG TGCCTAAGGGAAAAAAAACAAAAACGGGCACGGGAGATGGCGATGGCGCA GGCGTCTCGCCCGACGCAGCCAGCAGCGAGGCCGCTGCACCCAAAACGAA GGAAAGGATCAAGGAAGGGTACGAGGGGAAAGCGAAGGGGGGAAAGCAGT ATCTGTGGGAGCGCGGATGGTGGAAAGAGGGGATGTCGGCAGCGGCGACG GTCAGCGACGAGAAGAACGTCGAATTAGTCCTGCAGGCGCTGCCGGACTT CAAGAACGAGAGAACGGCGCTGCAGCACATTGTAGGCAGTCGGGGACACA TACTGTTGTTGTCGCCGAAATGCCACCCAGAAGTAGCGGGGGTAGGGATC GAGTATTCATGGGGGTACTCCAAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig20440:107..2530+

>mRNA_L-elsbetiae_contig20440.6158.1 ID=mRNA_L-elsbetiae_contig20440.6158.1|Name=mRNA_L-elsbetiae_contig20440.6158.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2676bp|location=Sequence derived from alignment at L-elsbetiae_contig20440:107..2530+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACGTGTCACACAGGGAAACCAGTCAACAGCCTCGGGAACCTCTGTGC
CGTGCAAGAGAAAGAGTTCAAGCGACAGCGGGTAGATGGCTCAGACAAGA
CGCGCGCCGAGTTTGCGCATGACTCCATGCTCTCCAGCCGCCAACGGCGT
TCGATGAAGCGGGGGTGGGGCAAGAGAGAAGCGAGACTTCGAAGGGCATT
CGACAAACGTGGTTCCTACCTCGGCAACCGGATCGACGAGCTGAAGTCAA
GCCTCGCTTCCAACGCGCAACACATCAAGCGGATCGAGGGTGCCCTCGCG
GCGCGAGACCTCGACAGCCTTCTCGTCCCCCTCCCACCTCCCGAGGAAGG
ATACGAGGACGGTGAAGATTGGTGGATCGAGGGCGAGGAGGACGAGTGGA
AGGAGACAATATCCGACGCGCAGGCAAGCCGGGTGTGGTACCAAGGGTGG
TCGGCGCTGCAGGTGCTGAAAGAGGAGCATACGCGCGACCAACAGCAGCT
GCAGCTTACGGTGGAGGCGAAGGCGTTGTCGGACCTCGATCTTCCGACGA
AGGATGCCGTGGAGAAGGCCGATGCCCAACGTTTTGCCCTGCTGGACGAG
GCGTCGCGTATTCGACACGAATCGTCGCTCCTGCGGATCGGGGCGAACGT
GCTAGCCGCCGGCACGCGGGGTTGCGCGGTATCGACGATCCTGGCGTGGG
TCAGGGACTTTCGGAAGCTCGGTGGTTTCAAGCGAGATGCCCGGGGTGTC
CATGAGAGGGACTGGATCATGTCCGAGGAGGACCTGCAGCATGAGCTCCT
CACGTGGATGAGGAAGCAGGGGCGTCTCACCGTCAAGAAGGTCCGCGAAT
ACATCAACGGCTTCTTGTTCGCCAACGAGATCGGAGACCTGTCCAGACTC
CTTGCATACCAGGTGACCCTTCCCGTCTCGATGTCCACCACCCTCGCGTG
GATGAAAGCTTTGGGGTGCAAGTACAAGCGAGCTGATAAGTCGTACTACA
CAGACACCCATGAGAAGGAGGCGGTAGTCAAGGACCGCGGCGGGTACGTA
GAGAAGAAGCGCAAGTACGCGCTGCGTCAAGCGGTGTGGGTGCGAGTGCG
ACGGGCCAGTCTGACGCCGGAGGAGAGGAAGCGGCTCGACGACATCAAGG
CAGAAGATGACGTGTCACACAGGGAAACCAGTCAACAGCCTCGGGAACCT
CTGTGCCGTGCAAGAGAAAGAGTTCAAGCGACAGCGGGTAGATGGCTCAG
ACAAGACGCGCGCCGAGTTTGCGCATGACTCCATGCTCTCCAGCCGCCAA
CGGCGTTCGATGAAGCGGGGGTGGGGCAAGAGAGAAGCGAGACTTCGAAG
GGCATTCGACAAACGTGGTTCCTACCTCGGCAACCGGATCGACGAGCTGA
AGTCAAGCCTCGCTTCCAACGCGCAACACATCAAGCGGATCGAGGGTGCC
CTCGCGGCGCGAGACCTCGACAGCCTTCTCGTCCCCCTCCCACCTCCCGA
GGAAGGATACGAGGACGGTGAAGATTGGTGGATCGAGGGCGAGGAGGACG
AGTGGAAGGAGACAATATCCGACGCGCAGGCAAGCCGGGTGTGGTACCAA
GGGTGGTCGGCGCTGCAGGTGCTGAAAGAGGAGCATACGCGCGACCAACA
GCAGCTGCAGCTTACGGTGGAGGCGAAGGCGTTGTCGGACCTCGATCTTC
CGACGAAGGATGCCGTGGAGAAGGCCGATGCCCAACGTTTTGCCCTGCTG
GACGAGGCGTCGCGTATTCGACACGAATCGTCGCTCCTGCGGATCGGGGC
GAACGTGCTAGCCGCCGGCACGCGGGGTTGCGCGGTATCGACGATCCTGG
CGTGGGTCAGGGACTTTCGGAAGCTCGGTGGTTTCAAGCGAGATGCCCGG
GGTGTCCATGAGAGGGACTGGATCATGTCCGAGGAGGACCTGCAGCATGA
GCTCCTCACGTGGATGAGGAAGCAGGGGCGTCTCACCGTCAAGAAGGTCC
GCGAATACATCAACGGCTTCTTGTTCGCCAACGAGATCGGAGACCTGTCC
AGACTCCTTGCATACCAGGTGACCCTTCCCGTCTCGATGTCCACCACCCT
CGCGTGGATGAAAGCTTTGGGGTGCAAGTACAAGCGAGCTGATAAGTCGT
ACTACACAGACACCCATGAGAAGGAGGCGGTAGTCAAGGACCGCGGCGGG
TACGTAGAGAAGAAGCGCAAGTACGCGCTGCGTCAAGCGGTGTGGGTGCG
AGTGCGACGGGCCAGTCTGACGCCGGAGGAGAGGAAGCGGCTCGACGACA
TCAAGGCAGAAGCGGCGACGGTCAGCGACGAGAAGAACGTCGAATTAGTC
CTGCAGGCGCTGCCGGACTTCAAGAACGAGAGAACGGCGCTGCAGCACAT
TGTAGGCAGTCGGGGACACATACTGTTGTTGTCGCCGAAATGCCACCCAG
AAGTAGCGGGGGTAGGGATCGAGTATTCATGGGGGTACTCCAAGCGGCGA
CGGTCAGCGACGAGAAGAACGTCGAATTAGTCCTGCAGGCGCTGCCGGAC
TTCAAGAACGAGAGAACGGCGCTGCAGCACATTGTAGGCAGTCGGGGACA
CATACTGTTGTTGTCGCCGAAATGCCACCCAGAAGTAGCGGGGGTAGGGA
TCGAGTATTCATGGGGGTACTCCAAG
back to top