mRNA_L-elsbetiae_contig2041.6147.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 190 bits (483), Expect = 2.420e-52 Identity = 103/153 (67.32%), Postives = 122/153 (79.74%), Query Frame = 2 Query: 287 AARLAGTQGAGEMVDSLLRAGADETIVDDAGRKAVDMIGAKVDEDTEGYLAEDFERVRELLANAPADRAWRRRGYLVLCRAHPDRVQQSQVISGTHHSNTAWKARSRAQLAWAGGKAGDSSADESTGGGWAVVVAKVLLLQEEAIFRTIVGYM 745 A R AG QGA E+V+SLLRAGADETI + G KAVDMIG V+E E L ED ERVRELLANAPADRAWRRRGYL++CRA PDRV + ++ SGTH++N A + RSRA++A A G AG+S+ DESTGG WAVVV+KV+ LQEE IFRTIV Y+ Sbjct: 250 AGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEE--EDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 101 bits (252), Expect = 9.090e-20 Identity = 68/156 (43.59%), Postives = 90/156 (57.69%), Query Frame = 2 Query: 287 AARLAGTQGAGEMVDSLLRAGADETIVDDAGRKAVDMIGAKVDEDTEGYLAEDFERVRELLANAPADRAWRRRGYLVLCRAHPDRVQQSQVISGTHHSNTAWKARSRAQLAWA---GGKAGDSSADESTGGGWAVVVAKVLLLQEEAIFRTIVGYM 745 AA AG QG+ E+VD LLR GADET D G++ D +G + E + L + V ELLANAPADRAWRRRG LVLCRA R + Q G + + RSRA+LA + G + + TG W +V+ L+EE IFR++VG++ Sbjct: 268 AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCM-ELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 3.690e-18 Identity = 68/153 (44.44%), Postives = 88/153 (57.52%), Query Frame = 2 Query: 299 AGTQGAGEMVDSLLRAGADETIVDDAGRKAVDMIGAKVDEDTEGYLAEDFERVRELLANAPADRAWRRRGYLVLCRAHPDRVQQSQVISGTHHSNTAWKARSRAQLAW----AGGKAGDSSADESTGGGWAVVVAKVLLLQEEAIFRTIVGYM 745 AG +GA E+VD LLR ADET D G +++G E ++ + +RV +LL AP DRAWRRRG LVLCRAHP+R+ Q S S RSR +L AGG ++AD T W+ +V +VL L +E IFRTIVGY+ Sbjct: 250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFV--NVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 7.240e-18 Identity = 63/125 (50.40%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 275 FHQIAARLAGTQGAGEMVDSLLRAGADETIVDDAGRKAVDMIGAKVDEDTEGYLAEDFERVRELLANAPADRAWRRRGYLVLCRAH--PDRVQQSQVISGTHHSNTAWKARS-----RAQLAWAG 628 H +AA+ AG+ G EMVD LLR GADET V + G A DM+ K +E LAED +RVR+LLA APADRAWRRRG+L+L RAH RVQ S + A + RS RA++ WAG Sbjct: 626 LHLVAAK-AGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDS--LAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAG 747
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 2.420e-17 Identity = 52/87 (59.77%), Postives = 62/87 (71.26%), Query Frame = 2 Query: 287 AARLAGTQGAGEMVDSLLRAGADETIVDDAGRKAVDMIGAKVDEDTEGYLA-EDFERVRELLANAPADRAWRRRGYLVLCRAHPDRV 544 A +AG +G E+VDSLLR+GADETI+D GR AVDMI +V +L+ E +RVR+LL NA ADRAW RR YLVLCR HPDR Sbjct: 91 ATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEV---AGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDRA 174
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 3.470e-17 Identity = 55/91 (60.44%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 281 QIAARLAGTQGAGEMVDSLLRAGADETIVDDAGRKAVDMIGAKVDEDTEGYLAEDFERVRELLANAPADRAWRRRGYLVLCRAHPDRVQQS 553 + A AG QG E+VD LLR GADET V G +A D IG KV E E + E+FE VR+LLANAPADRAWRRR LVLCRA PD++Q S Sbjct: 267 EYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPE--EDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLS 355
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 8.220e-16 Identity = 56/128 (43.75%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 284 IAARLAGTQGAGEMVDSLLRAGADETIVDDAGRKAVDMIGAKVDEDTEGYLAEDFERVRELLANAPADRAWRRRGYLVLCRAHPDRVQQSQVISGTHHSNTAWKARSRAQLAWAGGKAGDSSADESTG 667 IAAR AG QG +VD LLR GADET ++ GR A +++G ++ +D ERVR+LL NAP DRAWRRRG+LVLCRA + ++ + S SN + RS + A G G+ D+ G Sbjct: 211 IAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGP-RVRSLSTGARISGAGGELREDDDKG 337
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 1.010e-15 Identity = 51/93 (54.84%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 290 ARLAGTQGAGEMVDSLLRAGADETIVDDAGRKAVDMIGAKVDEDTEGYLAEDFERVRELLANAPADRAWRRRGYLVLCRAHPDRVQQSQVISG 568 A + G+ ++VD LLR GADETIV G A D IG + T+ ED ER R LLA APADRAWRRRG LVLCRAHPDR+Q ++G Sbjct: 281 AAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTD---PEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLGGDLAG 370
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Match: D7G0W2_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W2_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 1.160e-15 Identity = 58/158 (36.71%), Postives = 91/158 (57.59%), Query Frame = 2 Query: 284 IAARLAGTQGAGEMVDSLLRAGADETIVDDAGRKAVDMIGAKVDE-DTEGYLAEDFERVRELLANAPADRA---WRRRGYLVLCRAHPDRVQQSQVISGTHHSNTAWKARSRAQLAWAGGKAGDSSADESTGGGWAVVVAKVLLLQEEAIFRTIVGYM 745 +AA+ T+ + E VD+LL+AGADET +D G+ +D++ A++ D G + ER R +L NAP DRA W RR + V+CRAHPDRV+ + V+ T S A K + A A G+ G A+ + + + ++ L+E+ +FR IV ++ Sbjct: 124 VAAQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAAGDLMGASVNEAERTRSVLVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLT-VVDDTTTSPRAKKTMAAAATAVGSGRRG---ANRDSADNFQRAMRSLIRLKEDGLFRKIVAFL 277
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 7.370e-15 Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 284 IAARLAGTQGAGEMVDSLLRAGADETIVDDAGRKAVDMIGAKVDEDTEGYLAEDFERVRELLANAPADRAWRRRGYLVLCRA 529 IAAR AG QG +VD LLR GADET ++ GR A +++G ++ +D ERVR+LL NAPADRAWRRRG LVLCRA Sbjct: 260 IAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2041.6147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2041.6147.1 >prot_L-elsbetiae_contig2041.6147.1 ID=prot_L-elsbetiae_contig2041.6147.1|Name=mRNA_L-elsbetiae_contig2041.6147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp MVDSLLRAGADETIVDDAGRKAVDMIGAKVDEDTEGYLAEDFERVRELLAback to top mRNA from alignment at L-elsbetiae_contig2041:14827..16586+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2041.6147.1 ID=mRNA_L-elsbetiae_contig2041.6147.1|Name=mRNA_L-elsbetiae_contig2041.6147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1760bp|location=Sequence derived from alignment at L-elsbetiae_contig2041:14827..16586+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2041:14827..16586+ >mRNA_L-elsbetiae_contig2041.6147.1 ID=mRNA_L-elsbetiae_contig2041.6147.1|Name=mRNA_L-elsbetiae_contig2041.6147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig2041:14827..16586+ (Laminarionema elsbetiae ELsaHSoW15)back to top |