mRNA_L-elsbetiae_contig203.6103.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig203.6103.1
Unique NamemRNA_L-elsbetiae_contig203.6103.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Match: A0A6H5K3P6_9PHAE (Dihydroxy-acid dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P6_9PHAE)

HSP 1 Score: 980 bits (2533), Expect = 0.000e+0
Identity = 498/526 (94.68%), Postives = 511/526 (97.15%), Query Frame = 1
Query:    1 DRAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGNAPGSSEPLDIVSAFQAYGEFAYDRITEEERQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEECHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQEIIKPMSDPIKSSGHLQIMYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQDGGPIALLKDDDPIVIDAEKRTISVLISSTELDKRRQDWVAPPPAATKGTLFKYIKNVASASEGCVTDE 1578
            ++AQVGVSSVWFEGNPCNMHLLDLAKEAKDGV E GMVG+RFNTIGVSDGISMGT GMSFSLQSRDVIADSIETVMGGQWYD NI+IPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAG A G S  LDIVSAFQAYGEFAYDRITEE+RQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKK+ECHRAA+AVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIEL IDDFQTIS+KVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQ+IIKPMSDPIK SGH+QI+YGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEI  G VVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQ+GGPIALLKDDDPIVIDAEKRTISVLISSTEL+KRRQDWV PPPAATKGTLFKYIKNVASASEGCVTDE
Sbjct:   46 NKAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVTEAGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDVIADSIETVMGGQWYDGNISIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGKAAGES--LDIVSAFQAYGEFAYDRITEEQRQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKDECHRAAQAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELDIDDFQTISNKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQDIIKPMSDPIKPSGHIQILYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEIKAGTVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQEGGPIALLKDDDPIVIDAEKRTISVLISSTELEKRRQDWVPPPPAATKGTLFKYIKNVASASEGCVTDE 569          
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Match: A0A835ZF89_9STRA (Dihydroxy-acid dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF89_9STRA)

HSP 1 Score: 851 bits (2199), Expect = 5.560e-308
Identity = 423/525 (80.57%), Postives = 472/525 (89.90%), Query Frame = 1
Query:    4 RAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGNAPGSSEPLDIVSAFQAYGEFAYDRITEEERQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEECHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQEIIKPMSDPIKSSGHLQIMYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQDGGPIALLKDDDPIVIDAEKRTISVLISSTELDKRRQDWVAPPPAATKGTLFKYIKNVASASEGCVTDE 1578
            +AQVG+SSVWFEGNPCNMHLLDLA + K+GVV+ GMVG+RFNTIGVSDGISMGT GMSFSLQSRD+IADSIETVMGGQWYDAN++IPGCDKNMPGCLIAMGR+NRP++MVYGGTIRAG        LD+VSAFQ+YGE+ YDRITE +R  +V N+CPGPGACGGMYTANTMA AIEALGMSLPYSSS PAD   K EEC +A +A++ +L+KDLKP+DIVTRASFENA+VTVMALGGSTNAVLHLIAMARAF ++LTIDDFQ  SDKVPF+ADLKPSGKYVMED+Q +GG PAV+K LME GL+DGSCMTVTGKT+AENL +LPGL EGQEIIKP+S PIK +GHLQI+YGNVAP G+VAKITGKEGLTFSGVAKVYD EEDM+  L RKEITPGMVVVIRYEGPKGGPGMPEMLTP+SAIMGAGLG SVALITDGRFSGGSHGFIIGHITPEAQ GGPIALL+D DPIVIDAEK+ I+VL+   +LD RR+DWVAPP  AT+GTL+KYIKNVASAS GCVTDE
Sbjct:   41 KAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTK-EYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTDE 564          
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Match: W7TJB0_9STRA (Dihydroxy-acid dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJB0_9STRA)

HSP 1 Score: 824 bits (2129), Expect = 1.690e-296
Identity = 407/527 (77.23%), Postives = 465/527 (88.24%), Query Frame = 1
Query:    4 RAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGNAPGSSEPLDIVSAFQAYGEFAYDRITEEERQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEECHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQEIIKPMSDPIKSSGHLQIMYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQDGGPIALLKDDDPIVIDA--EKRTISVLISSTELDKRRQDWVAPPPAATKGTLFKYIKNVASASEGCVTDE 1578
            + QVG+SSVWFEGNPCNMHLL LA+  K GVV  GMVG+RFNTIGVSDGISMGTSGMSFSLQSRD+IADSIETVM GQWYDANIA+PGCDKNMPGCLIAMGR+NRPSIMVYGGTIRAG +PG  E LDIVSAFQAYGE+ Y+RI E ER  ++ NACPGPGACGGMYTANTMA+A EALGM+LPYSSSTPADDP+K+EEC RA  AVRN+LEKD+KP+DI+TRA+FENA+VTVMALGGSTNAVLHLIAMARA  I L++DDFQ  SD+VPF+ADLKPSGKYVMED+Q +GG PAV+K L+E+G LDGSCMTVTGKTMAENL +LP L  GQ++I P+  PIKS+GHLQI+YGN+APGG+VAKITGKEG  FSGVA V+DSEEDML +L RKEI  GMV+VIRYEGPKGGPGMPEMLTP+SAIMGAGLG  VALITDGRFSGGSHGF+IGH++PEAQ+GGPIAL++D DPIVIDA  ++R + +LIS  E+ KR+  W   P  A++GTL+KYIKNVASASEGCVTDE
Sbjct:   91 KPQVGISSVWFEGNPCNMHLLGLAEHVKKGVVASGMVGYRFNTIGVSDGISMGTSGMSFSLQSRDIIADSIETVMSGQWYDANIALPGCDKNMPGCLIAMGRLNRPSIMVYGGTIRAGCSPGH-EKLDIVSAFQAYGEYQYERIDETERAEIIRNACPGPGACGGMYTANTMATAAEALGMTLPYSSSTPADDPLKREECERAGAAVRNLLEKDIKPRDIMTRAAFENAMVTVMALGGSTNAVLHLIAMARAVGIPLSLDDFQACSDRVPFIADLKPSGKYVMEDVQKIGGTPAVMKYLLEKGFLDGSCMTVTGKTMAENLKDLPSLSAGQDVILPVETPIKSTGHLQILYGNLAPGGSVAKITGKEGERFSGVAAVFDSEEDMLAALERKEIKAGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGKDVALITDGRFSGGSHGFVIGHVSPEAQEGGPIALIQDGDPIVIDAHADQRRMDLLISDEEMAKRKAAWKPRPYPASRGTLYKYIKNVASASEGCVTDE 616          
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Match: A0A7S2WBW2_9STRA (Dihydroxy-acid dehydratase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBW2_9STRA)

HSP 1 Score: 816 bits (2107), Expect = 1.000e-293
Identity = 405/527 (76.85%), Postives = 458/527 (86.91%), Query Frame = 1
Query:    4 RAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGNAPGSSEPLDIVSAFQAYGEFAYDRITEEERQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEECHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQEIIKPMSDPIKSSGHLQIMYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQDGGPIALLKDDDPIVIDAE--KRTISVLISSTELDKRRQDWVAPPPAATKGTLFKYIKNVASASEGCVTDE 1578
            +AQVG++SVWFEGNPCNMHLLDLAK  K GV + G+VGF FNTIGVSDGISMGT GMSFSLQSRD+IADS+ETVMGGQWYD  IA+PGCDKNMPGCLIAMGR+NRP+IMVYGGTIRAG +P   E LDIVSAFQ+YGEF YDRITEEER T+V N+CPGPGACGGMYTANTMA+AIEALGMSLPYSSSTPADDP K+EEC RAAKA+  +LE DLKP+DI+++ SFENAI TVMALGGSTNAVLHLIAMARA D+ +T+DDFQ ISD  PF+ADLKPSGKYVMED+  VGG PAVLK L+E GLL G CMTVTGKT+AEN+ +L  L  GQE+I P+++PIK SGHLQI+YGN+AP G+VAKITGKEG  FSGVAKVYD EE MLE L  KEITPGMV+VIRYEGPKGGPGMPEMLTP+SAIMGAGLG  VALITDGRFSGGSHGF+IGH+TPEAQ GGP+AL++D DPIVIDA   +RTI++++   EL +R+  W APP  A +GTLFKYIKNVASAS GCVTDE
Sbjct:   55 KAQVGIASVWFEGNPCNMHLLDLAKTVKGGVQDSGLVGFCFNTIGVSDGISMGTDGMSFSLQSRDIIADSVETVMGGQWYDGLIALPGCDKNMPGCLIAMGRLNRPAIMVYGGTIRAGKSP-QHEQLDIVSAFQSYGEFVYDRITEEERATIVRNSCPGPGACGGMYTANTMATAIEALGMSLPYSSSTPADDPGKQEECERAAKAMYRLLELDLKPRDIMSKESFENAITTVMALGGSTNAVLHLIAMARAVDVPITLDDFQRISDATPFIADLKPSGKYVMEDIHKVGGTPAVLKYLLENGLLHGDCMTVTGKTLAENVKDLDPLAPGQEVIVPLANPIKPSGHLQILYGNMAPEGSVAKITGKEGERFSGVAKVYDKEEAMLEGLNNKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGKDVALITDGRFSGGSHGFVIGHVTPEAQVGGPLALVQDGDPIVIDARSSERTITLMVDDEELARRKAAWTAPPLPAKRGTLFKYIKNVASASLGCVTDE 580          
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Match: A0A7S2V1Y3_9STRA (Dihydroxy-acid dehydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y3_9STRA)

HSP 1 Score: 798 bits (2062), Expect = 2.180e-286
Identity = 391/526 (74.33%), Postives = 459/526 (87.26%), Query Frame = 1
Query:    1 DRAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGNAPGSSEPLDIVSAFQAYGEFAYDRITEEERQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEECHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLK-EGQEIIKPMSDPIKSSGHLQIMYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQDGGPIALLKDDDPIVIDAEKRTISVLISSTELDKRRQDWVAPPPAATKGTLFKYIKNVASASEGCVTD 1575
            ++ QVG++SVW+EGNPCNMHLLDLA   K+GV + GMVG+RFNTIGVSDGISMGT GMSFSLQSRD+IADSIETVMGGQWYDA IA+PGCDKNMPG +IAMGR+NRP IMVYGGTIRAG    + + LDIVSAFQ+YGE+ YDRITEEER+ +VENACPGPGACGGMYTANTMASAIEALGMSLP+SSS PAD  +KK+EC  A  A++ +++K++ PKDI+TR +FENA+V +MA GGSTNAVLHLIAMA++ D++LT+DDFQ +SD+VPF+ADLKPSGKYVMEDL G+GGIPAV+K LMEEGL+DGSC+T TGKT+AENLA+L  L  E Q+I+ P+  PIK +GH+ IMYGN+AP G+VAKITGKEGLTFSGVAKVYDSEEDML S+ RKEIT GMV++IRYEGPKGGPGMPEMLTP+SAIMGAGLG+ VAL+TDGRFSGGSHGFIIGH+TPEAQ GGPIAL++D DPIVID EK+TI VL+    + KR+  W  PP  ATKGTL+KYIK V SASEGC+TD
Sbjct:   86 NKPQVGIASVWYEGNPCNMHLLDLAGNVKEGVQQAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDACIALPGCDKNMPGVIIAMGRLNRPGIMVYGGTIRAGCTK-NFDKLDIVSAFQSYGEYMYDRITEEERKEIVENACPGPGACGGMYTANTMASAIEALGMSLPFSSSYPADSDLKKQECIAAGAAIKELMKKNITPKDIMTRQAFENAMVVIMATGGSTNAVLHLIAMAKSVDVDLTLDDFQKVSDRVPFLADLKPSGKYVMEDLLGIGGIPAVIKYLMEEGLIDGSCITCTGKTIAENLADLDTLNFETQDIVMPLDKPIKETGHINIMYGNLAPEGSVAKITGKEGLTFSGVAKVYDSEEDMLRSMERKEITKGMVIIIRYEGPKGGPGMPEMLTPTSAIMGAGLGADVALLTDGRFSGGSHGFIIGHVTPEAQVGGPIALVEDGDPIVIDCEKKTIDVLVDDDVMAKRKAAWSPPPLKATKGTLYKYIKAVGSASEGCITD 610          
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Match: I3CEE4_9GAMM (Dihydroxy-acid dehydratase n=2 Tax=Beggiatoa TaxID=1021 RepID=I3CEE4_9GAMM)

HSP 1 Score: 793 bits (2048), Expect = 4.550e-285
Identity = 384/525 (73.14%), Postives = 455/525 (86.67%), Query Frame = 1
Query:    4 RAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGNAPGSSEPLDIVSAFQAYGEFAYDRITEEERQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEECHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQEIIKPMSDPIKSSGHLQIMYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQDGGPIALLKDDDPIVIDAEKRTISVLISSTELDKRRQDWVAPPPAATKGTLFKYIKNVASASEGCVTDE 1578
            +AQVG+ SVW+EGNPCN+HLLDLA++ K+GV+  G+VG RFNT+GVSDGISMGT GMSFSLQSRD+IADSIET+MGGQWYDANI++PGCDKNMPGCLIAMGR+NRPS+M+YGGTIR G      EP+DIV+AFQ+YG F   +ITEEERQ +V +ACPG GACGGMYTANTMASAIEALGMSLPYSSSTPA +  K EEC  A  A+RN+LEKD+KP+DI+TRA+FENAIV VMALGGSTNAVLHLIA+AR+ D++L IDDFQ ISDK PF+ADLKPSG YVMED+  +GG PA++K L+E+GLLDGSC+TVTGKT+AENLA+LP LK GQ++I+P+ +PIK +GH+QI+ GN+APGG+VAKITGKEGL F+G AKVYD EEDML +L RKEI  G VV+IRYEGPKGGPGMPEMLTP+SAIMGAGLG+ VAL+TDGRFSGGSHGFI+GHI PEAQ+GGPIAL+K+ D I IDAE + I + +S  EL KRR +W  PP  A +GTL+KYIKNV +ASEGCVTDE
Sbjct:   37 KAQVGIGSVWYEGNPCNIHLLDLAQKVKEGVIAAGLVGMRFNTVGVSDGISMGTRGMSFSLQSRDLIADSIETIMGGQWYDANISLPGCDKNMPGCLIAMGRLNRPSLMIYGGTIRPGYNK-KQEPIDIVTAFQSYGAFISGKITEEERQDIVRHACPGAGACGGMYTANTMASAIEALGMSLPYSSSTPATEAYKLEECFNAGVAIRNLLEKDIKPRDIMTRAAFENAIVMVMALGGSTNAVLHLIAIARSVDVDLNIDDFQRISDKTPFLADLKPSGLYVMEDVHHIGGTPAIMKYLLEKGLLDGSCLTVTGKTIAENLADLPALKAGQQVIRPLENPIKPTGHIQILKGNLAPGGSVAKITGKEGLRFTGTAKVYDCEEDMLSALERKEIQKGDVVIIRYEGPKGGPGMPEMLTPTSAIMGAGLGNDVALLTDGRFSGGSHGFIVGHIVPEAQEGGPIALVKNGDIITIDAENKRIDIDVSDAELAKRRTEWKQPPYKANRGTLYKYIKNVKNASEGCVTDE 560          
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Match: A0A6U0VBG4_9STRA (Dihydroxy-acid dehydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VBG4_9STRA)

HSP 1 Score: 791 bits (2042), Expect = 2.230e-283
Identity = 384/524 (73.28%), Postives = 455/524 (86.83%), Query Frame = 1
Query:    4 RAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGNAPGSSEPLDIVSAFQAYGEFAYDRITEEERQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEECHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQEIIKPMSDPIKSSGHLQIMYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQDGGPIALLKDDDPIVIDAEKRTISVLISSTELDKRRQDWVAPPPAATKGTLFKYIKNVASASEGCVTD 1575
            +AQ+G+SSVW+EGNPCNMHL+DLA+  K+GV   G+V +RFNT+GVSDGISMGT GM FSLQSRD+IADSIETVMGGQWYDANIA+PGCDKNMPG ++AMGR+NRP IMVYGGTIRAG +   ++ LDIVSAFQ+YGE  Y+RITEEER  +V N+CPGPGACGGMYTANTMA+AIEA+GMSLPYSSSTPA+DP+K +EC RA  A++ +LE DLKP+DI+TR +FENAIV VMA GGSTNAVLHLIAMA +  IE+T DDFQ ISDKVPF+ADLKPSG+YVMED+QG+GG PAV+K LMEEG +DGSCMTVTGKT+AENLA+LPGL  GQ+II+P+SDPIKS+GH+QI+YGNVA  G+VAKITGKEGL FSG+AKV+D+E+DM+ ++ RKEI  G V+V+RY+GPKGGPGMPEML P+SAIMGAGLG+  ALITDGRFSGGSHGFIIGH+TPEAQ GG IALL+D DPIVIDAE + I V ++  EL +RR  W APP   T+GTL+KY K VASA+ GCVTD
Sbjct:   85 KAQIGISSVWYEGNPCNMHLMDLAQAVKEGVAAAGLVPYRFNTVGVSDGISMGTPGMRFSLQSRDLIADSIETVMGGQWYDANIALPGCDKNMPGTIMAMGRLNRPGIMVYGGTIRAGKSSTGAK-LDIVSAFQSYGEAVYERITEEERADIVRNSCPGPGACGGMYTANTMATAIEAMGMSLPYSSSTPAEDPLKLDECRRAGAAIKTLLEMDLKPRDIMTRQAFENAIVMVMATGGSTNAVLHLIAMAHSVGIEVTQDDFQRISDKVPFLADLKPSGQYVMEDVQGIGGTPAVMKFLMEEGFIDGSCMTVTGKTIAENLADLPGLSPGQDIIRPLSDPIKSTGHIQILYGNVATEGSVAKITGKEGLRFSGIAKVFDTEDDMIAAVERKEIGKGTVIVLRYQGPKGGPGMPEMLKPTSAIMGAGLGADTALITDGRFSGGSHGFIIGHVTPEAQVGGTIALLQDGDPIVIDAESKAIDVHVNDEELARRRSQWTAPPLKYTQGTLYKYSKLVASAARGCVTD 607          
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Match: A0A496V6P6_9GAMM (Dihydroxy-acid dehydratase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496V6P6_9GAMM)

HSP 1 Score: 781 bits (2017), Expect = 2.360e-280
Identity = 378/525 (72.00%), Postives = 456/525 (86.86%), Query Frame = 1
Query:    4 RAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGNAPGSSEPLDIVSAFQAYGEFAYDRITEEERQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEECHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQEIIKPMSDPIKSSGHLQIMYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQDGGPIALLKDDDPIVIDAEKRTISVLISSTELDKRRQDWVAPPPAATKGTLFKYIKNVASASEGCVTDE 1578
            +AQVG++SVW+EGN CNMHL+DLA + K+GV   GMVG RFNTIGVSDGISMGT GMSFSLQSRD+IADS+ET+MG QWYDANI++PGCDKNMPGC++AMGR+NRP++M+YGGTI+ G+    ++ LDIVSAFQ+YG++    ++EEERQ VV +ACPG GACGGMYTANTMASAIEALGMSLPYSSSTPA+ P K EEC RA   +R +LEKD+KP+DI+TRA+FENA+V VMALGGSTNAVLHLIAMARA D+ LTIDDFQ +SD+VPF+ADLKPSG+YVMED+  +GG PAV+K L+E+GLL+G C+TVTGKT+AENLA+LP L EGQ+II+P+ +PIK+SGH+QI+ GN+APGGAVAKITGKEG +F G AKVYDSEEDML +L RK I  G VVVIRYEGPKGGPGMPEMLTP+SAI+GAGLG  VAL+TDGRFSGGSHGFI+GHI PEAQ+GGPIAL+K+ D + IDA+ +T+SV IS+ +L +R+  W  PP  AT+GTL+KYIKNV +ASEGCVTDE
Sbjct:   37 KAQVGIASVWYEGNTCNMHLMDLATKVKEGVTAAGMVGMRFNTIGVSDGISMGTRGMSFSLQSRDLIADSVETMMGAQWYDANISLPGCDKNMPGCIMAMGRLNRPALMIYGGTIKPGHDK-DNKTLDIVSAFQSYGQYLAGTLSEEERQDVVRHACPGAGACGGMYTANTMASAIEALGMSLPYSSSTPAEYPGKLEECFRAGAVIRTLLEKDIKPRDIMTRAAFENAMVIVMALGGSTNAVLHLIAMARAVDVALTIDDFQKVSDRVPFLADLKPSGQYVMEDIHNIGGTPAVMKYLLEKGLLNGDCLTVTGKTVAENLADLPKLSEGQQIIRPLENPIKASGHIQILKGNLAPGGAVAKITGKEGFSFIGPAKVYDSEEDMLSALERKAIVKGDVVVIRYEGPKGGPGMPEMLTPTSAIVGAGLGKEVALLTDGRFSGGSHGFIVGHIVPEAQEGGPIALIKNGDVVTIDAQNKTLSVAISAEDLAQRQAQWTMPPYKATRGTLYKYIKNVKNASEGCVTDE 560          
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Match: A0A5B9QW70_9BACT (Dihydroxy-acid dehydratase n=4 Tax=Roseimaritima TaxID=1579506 RepID=A0A5B9QW70_9BACT)

HSP 1 Score: 781 bits (2016), Expect = 6.020e-280
Identity = 377/526 (71.67%), Postives = 458/526 (87.07%), Query Frame = 1
Query:    1 DRAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGNAPGSSEPLDIVSAFQAYGEFAYDRITEEERQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEECHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQEIIKPMSDPIKSSGHLQIMYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQDGGPIALLKDDDPIVIDAEKRTISVLISSTELDKRRQDWVAPPPAATKGTLFKYIKNVASASEGCVTDE 1578
            D+ Q+G+ SVW+EGN CNMHLL L ++ K+GV + GMVG RFNTIGVSDGISMGT GMS+SLQSRD+IADSIET+MGGQWYDA IA+PGCDKNMPGCLIAMGR+NRPSIMVYGGTIR G+     E LDIVSAFQ YG+F   +I++EERQ +V ++CPG GACGGMYTANTMA+AIEALGMSLPYS+S PA+ P K +EC +A +A+R +LE+D+KP+DI+TRA+FENA+VTVMALGGSTNAVLHLIAMAR+ D+ L+IDDFQ +SD+VP++ADLKPSG++V EDL  +GG PAV+K L++EGLL G CMTVTGKT+ EN+A+LPGLKEGQ+I++P+S+PIKSSGH++I+ G++APGGAVAKITGKEGL FSG AKV+DSEEDML++L  K+I+ G VV+IRYEGPKGGPGMPEMLTP+SAIMGAGLG+ VAL+TDGRFSGGSHGFI+GHITPEAQ+GGP+AL++D D + IDAE   + V +S  EL +RR  WVAPP  A +GTL+KYIKNV SASEGCVTDE
Sbjct:   53 DKPQIGIGSVWYEGNTCNMHLLKLGEKVKEGVQQAGMVGMRFNTIGVSDGISMGTEGMSYSLQSRDLIADSIETIMGGQWYDALIALPGCDKNMPGCLIAMGRLNRPSIMVYGGTIRPGHY--KDEKLDIVSAFQCYGQFLAGQISDEERQEIVRHSCPGAGACGGMYTANTMATAIEALGMSLPYSASAPAETPEKLDECVKAGEAIRVLLERDIKPRDIMTRAAFENAMVTVMALGGSTNAVLHLIAMARSVDVPLSIDDFQAVSDRVPYLADLKPSGRFVQEDLHSIGGTPAVMKYLLDEGLLTGDCMTVTGKTLGENVADLPGLKEGQKIVRPVSNPIKSSGHIRILRGSLAPGGAVAKITGKEGLQFSGPAKVFDSEEDMLKALEDKQISKGDVVIIRYEGPKGGPGMPEMLTPTSAIMGAGLGADVALLTDGRFSGGSHGFIVGHITPEAQEGGPLALVQDGDVVTIDAETNALDVDVSEQELQQRRDAWVAPPLKANRGTLYKYIKNVKSASEGCVTDE 576          
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Match: A0A7S0QPU2_9CRYP (Dihydroxy-acid dehydratase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPU2_9CRYP)

HSP 1 Score: 781 bits (2018), Expect = 1.980e-279
Identity = 388/528 (73.48%), Postives = 451/528 (85.42%), Query Frame = 1
Query:    1 DRAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDGISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGNAPGSSEP-LDIVSAFQAYGEFAYDRITEEERQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEECHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQEIIKPMSDPIKSSGHLQIMYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQDGGPIALLKDDDPIVIDAEK--RTISVLISSTELDKRRQDWVAPPPAATKGTLFKYIKNVASASEGCVTD 1575
            D+AQ+G+SSVW+EGNPCNMHLLDLA E K GV + G+VG+RFNTIGVSDGISMGT GMSFSLQSRD+IADSIETVMG QWYD NIA+PGCDKNMPG ++AM R+NRPS+MVYGGTIRAG+APG   P LDIVSAFQ+YGE+ Y +ITE ER  +V+ +CPGPGACGGMYTANTMA+AIEALGMSLPYSSS PAD   K++EC  A  AVR +LE DLKP+DI+TR +FENA+V VMA GGSTNAVLHLIAMAR+  I LTIDDFQ +SD+VPF+AD+KPSGKYVMED+QGVGG PA++K L+E+G +D S MTVTGKT+ ENL +LPGL  GQ +I P+  PIK +GHLQI++GN+AP G+VAKITGKEG TFSG A VYDSEEDML +LARKEIT GMVVVIRYEGPKGGPGMPEMLTP+SAIMGAGLG+ VALITDGRFSGG+HGF IGH+TPEAQDGGPIAL+K+ DPI IDA    R + VL+S  E+ KR+  W APP  AT+GTL+KYIK+V+ AS GCVTD
Sbjct:  100 DKAQIGISSVWYEGNPCNMHLLDLAAEVKKGVEDAGLVGYRFNTIGVSDGISMGTDGMSFSLQSRDIIADSIETVMGAQWYDGNIALPGCDKNMPGTIMAMARLNRPSLMVYGGTIRAGSAPGIGRPVLDIVSAFQSYGEYEYGKITEAERLEIVQKSCPGPGACGGMYTANTMATAIEALGMSLPYSSSMPADSSEKRKECRDAGAAVRKLLELDLKPRDIMTRQAFENAMVMVMATGGSTNAVLHLIAMARSCGITLTIDDFQKVSDRVPFIADMKPSGKYVMEDVQGVGGTPALMKYLVEKGYMDDSQMTVTGKTIRENLKDLPGLTAGQMVILPVEAPIKKTGHLQILFGNIAPEGSVAKITGKEGETFSGTAAVYDSEEDMLAALARKEITAGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGNDVALITDGRFSGGTHGFCIGHVTPEAQDGGPIALIKNGDPIQIDARSAVRKMEVLVSPEEMAKRKAAWKAPPLKATQGTLYKYIKSVSPASLGCVTD 627          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig203.6103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3P6_9PHAE0.000e+094.68Dihydroxy-acid dehydratase n=1 Tax=Ectocarpus sp. ... [more]
A0A835ZF89_9STRA5.560e-30880.57Dihydroxy-acid dehydratase n=1 Tax=Tribonema minus... [more]
W7TJB0_9STRA1.690e-29677.23Dihydroxy-acid dehydratase n=2 Tax=Monodopsidaceae... [more]
A0A7S2WBW2_9STRA1.000e-29376.85Dihydroxy-acid dehydratase n=2 Tax=Rhizochromulina... [more]
A0A7S2V1Y3_9STRA2.180e-28674.33Dihydroxy-acid dehydratase n=1 Tax=Fibrocapsa japo... [more]
I3CEE4_9GAMM4.550e-28573.14Dihydroxy-acid dehydratase n=2 Tax=Beggiatoa TaxID... [more]
A0A6U0VBG4_9STRA2.230e-28373.28Dihydroxy-acid dehydratase n=1 Tax=Pinguiococcus p... [more]
A0A496V6P6_9GAMM2.360e-28072.00Dihydroxy-acid dehydratase n=4 Tax=Gammaproteobact... [more]
A0A5B9QW70_9BACT6.020e-28071.67Dihydroxy-acid dehydratase n=4 Tax=Roseimaritima T... [more]
A0A7S0QPU2_9CRYP1.980e-27973.48Dihydroxy-acid dehydratase n=1 Tax=Cryptomonas cur... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig203contigL-elsbetiae_contig203:39209..50571 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score798.1
Seed ortholog evalue2.4e-228
Seed eggNOG ortholog395493.BegalDRAFT_1084
Preferred nameilvD
KEGG rclassRC00468,RC01714
KEGG koko:K01687
KEGG ReactionR01209,R04441,R05070
KEGG Pathwayko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00019,M00570
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836
EggNOG free text desc.Belongs to the IlvD Edd family
EggNOG OGs1MUTQ@1224,1RMP2@1236,4608Q@72273,COG0129@1,COG0129@2
EC4.2.1.9
COG Functional cat.E
Best tax levelThiotrichales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionDihydroxy-acid dehydratase, N-termnial part
Ec32 orthologEc-03_000220.1
Exons12
Model size1581
Cds size1581
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig203.6103.1prot_L-elsbetiae_contig203.6103.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig203 39209..50571 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815838.6713638-CDS-L-elsbetiae_contig203:39208..393311622815838.6713638-CDS-L-elsbetiae_contig203:39208..39331Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 39209..39331 -
1691683137.1386805-CDS-L-elsbetiae_contig203:39208..393311691683137.1386805-CDS-L-elsbetiae_contig203:39208..39331Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 39209..39331 -
1622815838.6842496-CDS-L-elsbetiae_contig203:40039..401601622815838.6842496-CDS-L-elsbetiae_contig203:40039..40160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 40040..40160 -
1691683137.1541677-CDS-L-elsbetiae_contig203:40039..401601691683137.1541677-CDS-L-elsbetiae_contig203:40039..40160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 40040..40160 -
1622815838.6945267-CDS-L-elsbetiae_contig203:41423..416291622815838.6945267-CDS-L-elsbetiae_contig203:41423..41629Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 41424..41629 -
1691683137.1648016-CDS-L-elsbetiae_contig203:41423..416291691683137.1648016-CDS-L-elsbetiae_contig203:41423..41629Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 41424..41629 -
1622815838.7049696-CDS-L-elsbetiae_contig203:43701..437851622815838.7049696-CDS-L-elsbetiae_contig203:43701..43785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 43702..43785 -
1691683137.176776-CDS-L-elsbetiae_contig203:43701..437851691683137.176776-CDS-L-elsbetiae_contig203:43701..43785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 43702..43785 -
1622815838.718713-CDS-L-elsbetiae_contig203:44603..447031622815838.718713-CDS-L-elsbetiae_contig203:44603..44703Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 44604..44703 -
1691683137.186471-CDS-L-elsbetiae_contig203:44603..447031691683137.186471-CDS-L-elsbetiae_contig203:44603..44703Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 44604..44703 -
1622815838.7304103-CDS-L-elsbetiae_contig203:45850..460021622815838.7304103-CDS-L-elsbetiae_contig203:45850..46002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 45851..46002 -
1691683137.1954334-CDS-L-elsbetiae_contig203:45850..460021691683137.1954334-CDS-L-elsbetiae_contig203:45850..46002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 45851..46002 -
1622815838.7405727-CDS-L-elsbetiae_contig203:46555..467081622815838.7405727-CDS-L-elsbetiae_contig203:46555..46708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 46556..46708 -
1691683137.2042408-CDS-L-elsbetiae_contig203:46555..467081691683137.2042408-CDS-L-elsbetiae_contig203:46555..46708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 46556..46708 -
1622815838.7504265-CDS-L-elsbetiae_contig203:48004..481121622815838.7504265-CDS-L-elsbetiae_contig203:48004..48112Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 48005..48112 -
1691683137.2169461-CDS-L-elsbetiae_contig203:48004..481121691683137.2169461-CDS-L-elsbetiae_contig203:48004..48112Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 48005..48112 -
1622815838.7620506-CDS-L-elsbetiae_contig203:48802..488951622815838.7620506-CDS-L-elsbetiae_contig203:48802..48895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 48803..48895 -
1691683137.2275693-CDS-L-elsbetiae_contig203:48802..488951691683137.2275693-CDS-L-elsbetiae_contig203:48802..48895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 48803..48895 -
1622815838.7764335-CDS-L-elsbetiae_contig203:49423..495341622815838.7764335-CDS-L-elsbetiae_contig203:49423..49534Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 49424..49534 -
1691683137.2368896-CDS-L-elsbetiae_contig203:49423..495341691683137.2368896-CDS-L-elsbetiae_contig203:49423..49534Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 49424..49534 -
1622815838.7907708-CDS-L-elsbetiae_contig203:49988..501491622815838.7907708-CDS-L-elsbetiae_contig203:49988..50149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 49989..50149 -
1691683137.247147-CDS-L-elsbetiae_contig203:49988..501491691683137.247147-CDS-L-elsbetiae_contig203:49988..50149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 49989..50149 -
1622815838.8023212-CDS-L-elsbetiae_contig203:50402..505711622815838.8023212-CDS-L-elsbetiae_contig203:50402..50571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 50403..50571 -
1691683137.2589438-CDS-L-elsbetiae_contig203:50402..505711691683137.2589438-CDS-L-elsbetiae_contig203:50402..50571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig203 50403..50571 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig203.6103.1

>prot_L-elsbetiae_contig203.6103.1 ID=prot_L-elsbetiae_contig203.6103.1|Name=mRNA_L-elsbetiae_contig203.6103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=527bp
DRAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVVEEGMVGFRFNTIGVSDG
ISMGTSGMSFSLQSRDVIADSIETVMGGQWYDANIAIPGCDKNMPGCLIA
MGRVNRPSIMVYGGTIRAGNAPGSSEPLDIVSAFQAYGEFAYDRITEEER
QTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKEE
CHRAAKAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAM
ARAFDIELTIDDFQTISDKVPFVADLKPSGKYVMEDLQGVGGIPAVLKML
MEEGLLDGSCMTVTGKTMAENLAELPGLKEGQEIIKPMSDPIKSSGHLQI
MYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEITPGMVV
VIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIG
HITPEAQDGGPIALLKDDDPIVIDAEKRTISVLISSTELDKRRQDWVAPP
PAATKGTLFKYIKNVASASEGCVTDE*
back to top

mRNA from alignment at L-elsbetiae_contig203:39209..50571-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig203.6103.1 ID=mRNA_L-elsbetiae_contig203.6103.1|Name=mRNA_L-elsbetiae_contig203.6103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11363bp|location=Sequence derived from alignment at L-elsbetiae_contig203:39209..50571- (Laminarionema elsbetiae ELsaHSoW15)
GATCGCGCGCAGGTGGGTGTCTCTAGCGTGTGGTTCGAAGGCAACCCCTG CAACATGCACCTGCTTGATCTGGCCAAGGAGGCCAAGGACGGCGTCGTGG AGGAGGGTATGGTGGGGTTCCGGTTCAACACCATCGGTGTTTCCGACGGT ATTTCCATGGGCACCAGCGGTGAGTGGGTGCTGTGCGGCAACTCGGCGAA GCTCTCATCCATCGAAATATTATGCAGGCTATTTATTGTACATATGAAAG CTTTCATTTTTGTCCATTCTTTCTCCTGGAGAATCCCGGCGGCCAAGCCC GTATCCCGTACCGTACCATGCCATACCACGCCATACCGTACCATATCATA CCATTCATAACTGTATGCTTAGGCCATACCAAACCATACCATCACGTACT ACGGTTGCGTTCGTTTCTGCAGGCATGTCGTTCTCCCTGCAGTCTCGAGA CGTGATCGCCGACTCCATCGAGACTGTCATGGGCGGCCAATGGTACGACG CCAACATCGCCATCCCGGGATGCGACAAAAACATGCCGGGGTGTCTCATC GCGATGGGACGGGTTAACCGCCCTTCTATCATGGTGAGACTTGCTGTCGG TGATGTTGGCGGGGCGGTGAGGGGTGTTGTCTGGTATGGTAGAGGAAGCG GTAGTCCTGGGGGCAGGGGTGAAGATGCTGCTGCTGTGTTTTCGGGTGAT GTTTTGATTGTTGCCTAGGGGGCACAAGAGTGTCATTTCGCACAACTGTG TTGGTGGTAGCCTTGATGACTCTCTGTCGTTGGTGGTACTGGTGGTGATG CGGTCAGCATTTCGGCCGTCACCTTCTCCTTGCGTGTGTGGCGGGTGGTG CCGCCAGTACCTTTTTTATCACCCACTTGTGTCTGAAAAACTAAAACAGA GGCTTTGCCTCTGTTCTCCACGCTGATGGCACTACTCACCAAGCGTCGTC AGCTATACACCTGTGGCAGCGTTGAACTTATCTCCAACTTTTCTGCCCCT CCCCTCACAAACTTGGTGATTTTTCTCTGTTGGTCAGGTGTACGGAGGTA CCATCCGCGCCGGGAATGCTCCTGGTTCTTCGGAGCCTTTGGACATCGTT TCCGCTTTCCAGGCCTACGGAGAGTTTGCCTACGATAGGATCACTGAGGT ACAGCAGTATTGTGGATGTTTTTGGTGTTTGGGGTCTCTGTGCTTCGGTC TCGGTTAAGTTAGCGGCCAAGGGCGCGGGGTCCGTAGACCTATGTATGTG GGGCGGTTAGGGGTGCTTTATACTGCGTGATAGCGTCGCAGCTGCATCAC GGTGGCACTCTTCAAAGCCAGGTTGCATGATGGCGAGACTCTTGACATCG GTTTACTTGGGAGTCGATGTCTTGGTCGTCGTGTGTGTGTGGACTCGAGT GTCACGCTTACCAACGGCGTTAGAGCAAACGATATTTCAGTGGCTAGATG GGGATAAAGTCATGCTGCGCTCACGCACGGGTGGAAGGTGTGAGTTAAGG TGTATGTTCATGATTACAACAGTAACTGTTCGCCGTTGCTCTACGACACG AGATCGAGTAGCCAGCCTTGGAAAGTCTCGTACCATGAGGCTTTATCCGC CCGGCCTGCCTGCTTTTGTGTAGACCGTTTCTCTTCTCGTCAAGGCTCTC TGACCGTTGTTTCGTGCGTCGTGCAGGAAGAGCGGCAGACGGTCGTGGAG AACGCCTGCCCCGGACCCGGTGCGTGCGGTGGGATGTACACCGCAAACAC CATGGCCAGCGCAATAGAGGTGAGGCTTTTTTTTTCCGGTATAAATTGCC CTTTTAGGGTAAGTTATCCTGTGACCACGGGAATCGACCGCGTCAGTGCT GGATTATAGTACGGACATATGGAGGTACTTGTACTGGATAGAGAGTTCAT AACGATTTTTAATGTGAAGACAGCAAGAAATAGATAAAATATAAATAGCT CAATAGGTTTTCGACAGACGAATACAGTTCCGTCTCTCTTCCTCGGTGCT CTTCGATGTGAGGGTTGTGCAAAATTATCTCTTTGTTCCAGGTACGTGTT GAGGCGTGGGTAGGGCACTGATCTGGTCATCATGGCTTGCTTGTTTCGAG CCTCGAGGCAGCTTGTACGTGACGTCGTACATAGTTCTCCATGCGCAAAA CCGATGCATCTGTTTGTCTTCTGCCTCCTTGCCTCCTTGCTGCCCCGCTT TTTAAAAATAAAACAAAGAATCAAAGATGGAACCTAACCCATACTAGAGC AAAGACTCGTTGTTGGTGTTGCATCGAAAACTCGGGGAGGCTAAGCTTGG TGTTCTACTCTGACAGCTGTGTTTCTTCCCTATTGTAGTGCCACTTGAGA GCTCTCTCCTTTCGTTTGCAGCCGCTCGTGTCGCGGCTCTTCCGTGTTGG TTGATCACGTCTTGGCTTCGCTCGCTTTTTGACCTGTGCTGGACCAAATC AACACCAAGGCCCTGGGCATGTCCCTGCCGTACTCGAGCTCCACCCCTGC CGACGACCCGATGAAGAAGGAGGAGTGCCACAGGGCGGCAAAGGCGGTGC GCAACATGCTGGAGAAGGTGAGTGGCCGGTGGGGAGTAGGAGTGTGCATG CGAGTGGGATATGCGGGAGTGCGGACGGCAGTTACGGTGGCGGTGCGTCG CGTGCTTTCGTGCAGGTGTAGAAGTTGTTGTTGTTGTTGTTGTTGTTTCT CACATTGACTCTCTAGTCCAAAACATCATTGGGGGCCCGTGGTCACAAAA CAAGGCACACTCACGCCACGGAAAAAAAATCCACAAAATTATAGTACATA CGCGCCCGGTGGTACTAAACTGGACCCCGGGGGGTCTTGCGTCTCGCCAG CACAAAATCAAAGGTATAGTACATACTACTCGGAAGACAAAATAAAAGAA AGTTTGAAAAGCAAACCAAATAAATACCAAATAGTATGTATGTATGTACC TGATGGTCTTATTTTGCCCACCCACGGTGTGTTTCCAAGTTGTCGCCCAA GGTATCAACCGATGTCTGCTAATATACCAGGGATTATGTTGTCGCCCAAG GTATCAACCGATGTCTGCTGTATATACTAGGGATTAGGTTGTCGCCCAAG GTATCAACCGATGTCTGCTATATATACCAGGGATTAGGTTGTCGCCCAAG GTGTCAACCGATGTCTGCTAATATACCAGGGATTAGGTTGTCGCCCAAGG TATCAACCGATGTCTGCTGTATATACCAGGGATTAGGTTGTCGCCCAAGG TATCAACCGATGTCTGCTGTATATACTAGGGATTAGGTTGTCGCCCAAGG TATCAACCGATGTCTGCTATATATACCAGGGGTTCTGTTTGGTTTTTGTA TTGGTGTTGGTGCTGTTGTTGTGCGGATGATGTCCGTCCCATCACTTGAC CCTTGTTTTTTCGTAGCGCCTTTTTTAGCGGCGGTGCTGCTGCCCCCACA CTCTTCGTTCTTCTATGTTCGCACGTAGTGGCGTCGTGGCGTTGAATAAT GCCCCCCCCCAAGGCTCGCTGCGATGAAAACAGCCCGGCGTGCTCGCTCC GTTTGTGCATGGTAACGGGTTCAGGCTTGCAAGGACTAAATAAAGTATGT ATGCCATTGGTCTTGTGAATCTCCGTCGTTATTTGTTTGTTCCCTGTGGC GGGACCTCAAATCCGAAGGGGGTGTTGTGATTGAAAAAGGAGCAAAATGC GAAAAGCGCTCTCATGTTTCGTGTTTTTGCCTCTGCTATTTGTCGCTGAG AATACCGGACCTCAAAACGAGGGATCTTCATGACGTCGTGATGGAAAAAA CGCGGTGTAACTTACCGGCTTGTCTTTTTCGCCTCGGCGTTTTTTTGTTG TTGCGTGCGGCAGGACCTCAAGCCGAAGGACATCGTTACGCGCGCGTCGT TCGAGAACGCGATCGTGACCGTCATGGCTCTCGGGGGCTCCACCAACGCG GTGCTGCACCTGATCGCCATGGCCAGGGCCTTCGACATCGAGCTCACCAT CGACGACTTCCAGACGGTGAGGACAGCAGCAGTGTTTGTCGATGATGATG TCTGTGGAATTTCTTCGTTTTGTTTGGATGGCACCCTCGTGGCGAACGGA TGCTTTTGACATGATCGACAGACGCTCATGATGTAAAAATAGGAAATAAA ATAAAATTGACCCGAAGGGGCCCATAAAGCACAAAACAAAAATCAGACAC ATATAGTCTGGAGCCTTCCGCTCCCCTCTACATGCTATGCGAAGTGAAAA ACAAAAGTGGACAGGCCAACATCACCAACCGGGGGGGGGATACGCCCCCT GGTTCTATCTTGGTTCCCCAAACAATGCCGGGGCACTCCGTATTTTTTTG TCTTGAAATAACAATAAACAAAATAGGCTGTGCCCGAAGCTTTGGTATTT GATGCCATTCAAACACCAATTAACCTCTGCTGCTGTGTGTCCGTTTTGTG CTTTATTCTGGGGGCGGTGCGGTGACCATGCGCCCCATTTGTCTGTTCCA TCTCGGAACTTACTTCAAGCTTTTCCCCCATGTAAATACACCCCTCCCCC TGCCTCCGACCTAAAACAGATATCTGACAAGGTTCCCTTCGTGGCCGACC TCAAGCCCAGCGGCAAGTACGTTATGGAGGACCTTCAGGGGGTGGGCGGC ATCCCGGCGGTGCTGAAGATGCTCATGGAGGAGGGGCTCTTGGACGGCTC GTGCATGACTGTCACCGGAAAGTGAGCGAATGCATTGCGTCACCCCTCTA GAACGCATTTCTACTTTTTCGTCGCGTAGTTGTGGAGTGGAGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTCCTTCCCATTTATTTTGGCGACAGTCCCC CTAAGTGGAGACGTGTACTACACCTTACTTAGAGGTACTACACTTTGCAG TGCATTTGTCTGTACAACCAGAACCAGGGGTGAATGTAGTGCATCGCCCT CAAGAACGCATTTTTACTCTTTTGGTCGTGTAAATACACACCATAGTCGT CTAGCGTTTTTTGTCGTTTCTTTATTTGTGTTGGTATGTTTGAGGTTGGT TTGGTATGGGTTTTGTTCACCCTTTGCGTGCGCCTGTGGTCGCTACCGAG GAGGATACATGAAGAAGAGGAGGTGCGACTTAATTCGCGGTTGCCGGGGC GCAAATATTTTCCTTTTTCGACGCGTTCTGTATGGACCTACCTACTATAT TACTCAAGCCTCTCGCTCAGGAGCCTAGAGCCTACTTTTTGGGGATTTCT CGGTCCATCGACCTCGCCTCGCCGAAATCTTTGCGCCTGCTGGTAGCCCT CGGCTGTGAGGGTTCTGCCCATGCGCCCTCGCCGTGGGGAAGGCTCGCAG CGCAGCGCTAGCGACGCGCAAAGTCACATCTCCCAAGTCTACGAATCCTC GGCCAGTTGCCGGCGTACAGCGATGACAGTCCCGCGGCGGGCAAATGCAC TGGGCGGACCTGCACGAGACGCCCACAACCTGGACATACAAAGTTCAAAC ACTTGCCATCGTCTCTATGGGCCTATCGCGTAGCGCGGCCCGCGATAGCG GACCGCCGCGAAGCGCCCTTGTATATATACATATTCCTCGTTGTTGTCGT ATGGGGTGGTCTTTAGTCTATTTGTAGTTCGTTTGCGGGATAATTGGCCT GTGCTAAATTCAGCCTGTGATAGTTGCTGTTGTATATAGCCCACACAGGC AGTTGTGCCTGTCTCTGGCTCACGATCCGGATGCGCGTACGACAAGTAAA AGTACTGGCACTGCATGAATCTTAGGGGCGGCTTCTGACTGTTTAACCAA CGACAGGGACAGCAACACCCTAAAACGGCACGAAAACAATATCATTACAT TCCTTTGCCTTTTTGCAGGACTATGGCGGAGAACTTGGCTGAGCTGCCGG GGTTGAAGGAGGGTCAGGAGATCATCAAGCCTATGTCCGACCCCATCAAG TCGTCTGGACACCTGCAGGTAGGTAATGGCGCCCTTCGGTCTCGGTGTTG TGTCGTGCGAGGGATCTTGCTGTTTTCAGCGGCTGTTCTGTTTGTTGTAC CGTAGGTGACACAAAATACCACCCCCCCCCCTGGACCGAACTTTAGAGCT CCATTACTCCGTAACGAAGAGGGTGCCAGCACCAAACGACACATTTTCGG ACAGCCCTCGACTAGATATTTCCAACGCCACCCCCTTTCGGCACTGACAC TCTTCTTGCTGGGGAGGAATCGAATCAAGCTTCGAAAACCTGTCCAGGGG GGGGGTGGTATGTTGTGTCACATGCGGCATGTACATAGGTTTGATTGGGG TGCTTTGCAGGGATCTCGTTTGGCGCCGGTGTGAATCGTGCTGTTACATA CTACTGTTTCGTGTATCGCTCGCACTTCCGTGTTGCTGGTATTGATTGTT GGTGATGCCACAAGTCTTTTTCGATGCTGGATGCCCGTGTTTGCCCTCCC TTTTGACTTGACCTCTCTCTGCCTTTCTCTCTCTTCATCTTGTGTCTTCC TTCCAACTTGTTAATTCTTTCGTTGGCTTTCGCCCCTCGTGTTTTCGGTG CCCTGTGGCATTTTTTTGCCATGCCCATGGAGAAAGGGACTTCGTCTCAA TACCAACCGTAGCCACGCGGCCGGCAGGCTTTTACGACATTTAGCCCCCG CCGTTCGTATTTAATTGCCTTGTTTTGTCGTGTCCAATTGCAATACTCAA TACTCCCACCGTTACCGTGGTCGGCCGTTCGCCTCCGACGTTTTGAATGG CGTGCCACACTCGGTATGGTGTGCACCGTCCGTCAGATCATGTACGGCAA CGTCGCGCCGGGGGGCGCCGTGGCTAAGATTACCGGGAAGGAGGGGCTCA CCTTCTCAGGCGTCGCAAAGGTGTGTGTGTGTGTGTGCGTGTGCGTGACA GAGAGAGAGGGGTAGACGGGAAACGCCGTGGGGAAAACAGCATCAGATCC GTGGGATGGTCTGTGTCTGCGCCATAAAAGCAAGATGCTTCCTCTCGGCG CACTGCTGTGTACATCGCATAAACTCACGGTCAGTTGGTAGGTACTTGGT CTTTTTCGGGGCTGCAATCGCAGAATAAAAGCAATTACGTTAGCCGCCTT CATTGAGCTGCCTCAACTCTCAAATCGAATGTGGAACGAACGCCACCAAA GGGGAGTACTGGATTGAATGACTTACCGTATACGACACAAGATGACACAC CCCCTGCGCCGATTTTCAAAGCTCAAGTACTCCTACTCCACAGCAAGAAA GGTGTCAGTCCCGAAAAGGGTAGCGTTGGAATGATCTCATCAAGAGCTGT CCGAAAACGTATCGTTTGGTATTGTAATCATATCCGTTGCGGAGTAACCG AGCGTTGAAAACCGGTCCAGGGGGTATGTTATCTTGTGTCATATCGTATA CGATCCCGGACTGCTGTAGATGATCCATCGTCATCACCCATATGCACACC GTCAGACAGACACCCTCATTTAGTAGGCACATACTTCCTCTGTCTCATAA GTCTGCGCGGTTATGTGTGTTGGAACCCGTAACCGTGTCTGATGCAGTCG GCGTTCATTTTTTTAGAATCTAGGATGTTTTTTGGGTTGAAAGCCGTTTT TTCTTTATTTTTTCACGCACCACCATGCATGCATGAACAGCCGAAAAAAA AGTAATAATCGGCCCAAATTAGGCCACACTTGGCCCTTTTCCGGAAAACA GAGAAGAAATTCGAAAATCCGGAAAATGACTGAAAAACGCTAAAAAAGGC AAATTTTGCCTCTTTTGTTTCCGCTTCATCGGTGAAGGACAATGCCTACG CCTCACCTGAAAACGTGTCATCTTGTTATCGGCTATTTAATCACGAAAAC AGGCAAAATTCGGGCAAATTCGGCCGAAAACGGTACAAATTGGCCGAAAT CGGCCTTACATTTGGTCACATTTGACTTGCAATAACTCAACCATACCAAC TCGGATTATTTTTTCTCTTTTTCTTTATGAGCATCATCACATCTCTAGCT TTCCCCTAAACATCACTATAGCATCTTAGGCAACTCTATTGGTGGTACAT GATCTGCCCCCCATAACTGCGCAGACTTATGAGACAAGAGGAAGTATATA CGTATGGTGTGCAGCCACCTATCTCACCTTGGCGTCACCGACCACTAACA GGTCACGTTCGTGGCTCTCAGAGCACTGGGTGCTATGTAGTGTCCTCTTA CACGGCCCGACAAATCGACAATAGGGAGAGTGCCAATGTCAAGAGAAGAT GTTCATTGGGAAGATATTGCCGAGTTTTTTTTTTACGAAAATCGGTTTTC GAGATCGATACCTTCTCTCTCCTTTACCGAGGTACTGGGCCGTGAAAAAC TGTCGCACCCCAGGGCGAACTCACGCACTCTTACGGTGCGTATGCACTCT TACGGTGCGTATGCACTCTTACGGTGCGTATGCACTCTTACGGTGCGTAT GCAGCCATCTCGCCTTGGCGCGTCGCCGACCACTAACATGTCACCTTCGG GGCGCTCAAAGCCTTGGATGCAATGTAGTGCTTATTTTGTCTTCGCGAAC CGGGTCCTTCAAAGCGAAAAAAACGTGGGTGGGGATGCTCCGTTCCGGCT TTGTTCTTCTGTTCTCCTAGGGATGAGAGATCTGCGGTCGAACGGCACTG CCATCACGATCAGCATCCAATCCGCCCCCCACGTTAATAGTGCCCAGCTG TTGGAAGGGTGGTGTATCTGTCTAGGTAGTCTACATGGAGCAAATCTAGC GGGTACGGCCCCCCGCCTCCGAAAGAGAAGCATCGTGTAGCTACAAAGTG CGACTTCGTAAATAATGCTTCTGAAGGTTATGGAATGTTAGCGAGTGTTA CAAAAGCAACGGACCCCCCTCCTGTCATTTCGCTCGCTTCCAAGGTGTAT GTCCCACGGAACCCCCCCCCCCCCCCCCCCCCGCCTCCCAAGGTGTATGA CTCGGAGGAAGACATGCTGGAGTCCCTGGCGCGAAAAGAGATCACGCCTG GCATGGTGGTGGTCATCCGGTACGAGGGCCCCAAGGGGGGGCCCGGCATG CCCGAGATGCTCACCCCGTCTTCGGCCATCATGGGGGCGGGCCTGGGCAG CTCTGTGGCGCTCATCACAGACGGCCGGTTCTCGGGGGGATCTCACGGGT GAGGAGGCGACACTCTCAACTGCTCAATTTGGAGTCAGTTTCGCTGACTA TTTAGGTGGTGCTGGTGTGGTGGTTATTTATTTCTTTTTTGTTTTTTCGG GGGGCACACGGCTGGATGGGTGCGAACAGAGGGGGGGGTTGTTGTTGATT CTCACACTGGCTCTCTGGTCCATAAACACCCTTGGGGGGCCGTGGTCACA AAACAAGGCACACTCGACGCCGCGGAAGAGAAATAAAACAACACAAGTAT GGTACATACGCGCCCGGTGGTACTAATCCGAGCCCCGGAGGGCCGGAGGG ATATCTCACGTGTCGCTGGCACAAATCAAAGGTATGGTACATTCTACTCG GAAGATAAAAATAAAAGGAAGGTCGAAAAACCAACTACCACGCCAGGCAG GGGAAGATAACTACGGGGGGCCGAACGTTTTTTCAGACGTGATCACTACA ACAACTGCAGCGGTGTTGGTTCATCCTTCTCGTGTGTTTCCCGCTTAGGG GTTAGGCCCGGTCTCGGAAATCTGGACCGGTACCCGGCCCGTATTTTGGG GTTTCAGACCGGCCCGATCCGGGTACGGCGGGTCGCAAACGCCGGGTACC CGGGTATGTACCCGGATTATCATGCCATATATTTGCTACCCTCTCTGACG ATATAGCCGCCGTTAAGCTCCTCGACGACGTGATAGAGCTGTAGGTGGAG GAGCATGACTTCATATCGTCTCCCGAGACGAATCATGCCAAAGAACAAAA AATGGAAAGAGGGTTCGATAGTTCGACATTCTCGGTGGCATATCTAGAGT TAGTGCATTTGTTTTGATACAAGGCAATACATTCGACATTTTTCCTTCTA CTATCATACGGTAATTGGCTATCGATGACACCCTTTTTGCTCACGACGCT CGTCGTGGGGGGGCCGTGGTATATGGTCAGGGGCCCCGTGGTATATGTTG GGGGACCCGTATAGTGAAACACCGGGTACCCGCTGAGTTGGACCGGGCCG GTTCCGGTCCCGGCCGGACCGGGTACCCGGTTACCAGGGATCAACCGGGC CTAACCTCAGTATCCGTGCATGCACCGCTGTACCTGGTGAGGCTTGCGTT CATTCGTTGAAACTTCGCGTCCGCTACCTTTGAGAGCCCCCCTAACTTTG TTTTCCGGTGCTTTGTTCCAGACGTTGCCCCATACGTATCTACAAGATGG TCTGAGCCTGATCGTTGTGTCCTCTGGTCTCTTCTGGCGTTTCTTGCTTG GATTCTCCCAGATTTATCATCGGACACATCACCCCGGAGGCGCAAGACGG CGGCCCGATCGCCCTCTTGAAGGACGACGACCCCATCGTCATCGACGCAG AAAAGCGCACCATCTCTGTCCTTATTTCCTCCGTGAGTCTGAGTTTGGCT TTTTGTCGTCGCTTGCCTGTGGTCTGTTGGATGCAATGTGGTGCCTGCCC TCCGTGAGTTTTTGGGATTGGTCGTGCGTGCTGCTTTTTGCTTGTTTTCT CTGACGTCATGTAGCGCCAGGGGCGCCCCTCTCCTGCACGAGGCCATCCA TCCCCCGGCAAGTTTTGTTTTTGTAGTTGTGTCCGAGATACATAGGCTGC CTTTTTTGGCGGATTATGGAGATAGTCAGACGTCTCCTCCCCGTATCCAA CCCGGCCAGGGCCAGTGCGAAATGCAATGCGGCCCCACGGAATCGAACTC GTTTGTACACACGGCACGTCTAGTCTATACTCCGCGGGGCCGTTTCCCAA GGATGCCGGGGGGGGGGGGGGCTGCTTTTTGGAACAGGCAGTGGACGCCC GCTTTTTTTCTCATATATGTTGTTCGGCCAGCCTCGAGCGTAGGCTTCGC AATCCAACGCTGCTTTGGCTGGTATCAGTCAACTGGCGGCAACGTCTCGT GATGTTCAACAAAATGATAAGGACTCGTTTTTATGTTTTCTCGTGATACC CCATCCGTGACAAAAAAACAGCCTCTGCACCGCCTCCATTCGATTGCTAG TCGCACCCATCTCCAGGCGAAACGAGCGACACAGATGGGTGATGCGAGTG ATAGATACATACCCTTCTTGTTTTTTTTTCGTCGTTACAGACCGAGCTGG ACAAGCGGCGACAAGACTGGGTGGCCCCACCTCCGGCCGCCACCAAGGGC ACACTGTTCAAGTACATCAAGAACGTGGCCTCTGCTTCTGAGGGCTGCGT CACCGACGAATAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig203:39209..50571-

>mRNA_L-elsbetiae_contig203.6103.1 ID=mRNA_L-elsbetiae_contig203.6103.1|Name=mRNA_L-elsbetiae_contig203.6103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3162bp|location=Sequence derived from alignment at L-elsbetiae_contig203:39209..50571- (Laminarionema elsbetiae ELsaHSoW15)
GATCGCGCGCAGGTGGGTGTCTCTAGCGTGTGGTTCGAAGGCAACCCCTG
CAACATGCACCTGCTTGATCTGGCCAAGGAGGCCAAGGACGGCGTCGTGG
AGGAGGGTATGGTGGGGTTCCGGTTCAACACCATCGGTGTTTCCGACGGT
ATTTCCATGGGCACCAGCGGATCGCGCGCAGGTGGGTGTCTCTAGCGTGT
GGTTCGAAGGCAACCCCTGCAACATGCACCTGCTTGATCTGGCCAAGGAG
GCCAAGGACGGCGTCGTGGAGGAGGGTATGGTGGGGTTCCGGTTCAACAC
CATCGGTGTTTCCGACGGTATTTCCATGGGCACCAGCGGCATGTCGTTCT
CCCTGCAGTCTCGAGACGTGATCGCCGACTCCATCGAGACTGTCATGGGC
GGCCAATGGTACGACGCCAACATCGCCATCCCGGGATGCGACAAAAACAT
GCCGGGGTGTCTCATCGCGATGGGACGGGTTAACCGCCCTTCTATCATGG
CATGTCGTTCTCCCTGCAGTCTCGAGACGTGATCGCCGACTCCATCGAGA
CTGTCATGGGCGGCCAATGGTACGACGCCAACATCGCCATCCCGGGATGC
GACAAAAACATGCCGGGGTGTCTCATCGCGATGGGACGGGTTAACCGCCC
TTCTATCATGGTGTACGGAGGTACCATCCGCGCCGGGAATGCTCCTGGTT
CTTCGGAGCCTTTGGACATCGTTTCCGCTTTCCAGGCCTACGGAGAGTTT
GCCTACGATAGGATCACTGAGGTGTACGGAGGTACCATCCGCGCCGGGAA
TGCTCCTGGTTCTTCGGAGCCTTTGGACATCGTTTCCGCTTTCCAGGCCT
ACGGAGAGTTTGCCTACGATAGGATCACTGAGGAAGAGCGGCAGACGGTC
GTGGAGAACGCCTGCCCCGGACCCGGTGCGTGCGGTGGGATGTACACCGC
AAACACCATGGCCAGCGCAATAGAGGAAGAGCGGCAGACGGTCGTGGAGA
ACGCCTGCCCCGGACCCGGTGCGTGCGGTGGGATGTACACCGCAAACACC
ATGGCCAGCGCAATAGAGGCCCTGGGCATGTCCCTGCCGTACTCGAGCTC
CACCCCTGCCGACGACCCGATGAAGAAGGAGGAGTGCCACAGGGCGGCAA
AGGCGGTGCGCAACATGCTGGAGAAGGCCCTGGGCATGTCCCTGCCGTAC
TCGAGCTCCACCCCTGCCGACGACCCGATGAAGAAGGAGGAGTGCCACAG
GGCGGCAAAGGCGGTGCGCAACATGCTGGAGAAGGACCTCAAGCCGAAGG
ACATCGTTACGCGCGCGTCGTTCGAGAACGCGATCGTGACCGTCATGGCT
CTCGGGGGCTCCACCAACGCGGTGCTGCACCTGATCGCCATGGCCAGGGC
CTTCGACATCGAGCTCACCATCGACGACTTCCAGACGGACCTCAAGCCGA
AGGACATCGTTACGCGCGCGTCGTTCGAGAACGCGATCGTGACCGTCATG
GCTCTCGGGGGCTCCACCAACGCGGTGCTGCACCTGATCGCCATGGCCAG
GGCCTTCGACATCGAGCTCACCATCGACGACTTCCAGACGATATCTGACA
AGGTTCCCTTCGTGGCCGACCTCAAGCCCAGCGGCAAGTACGTTATGGAG
GACCTTCAGGGGGTGGGCGGCATCCCGGCGGTGCTGAAGATGCTCATGGA
GGAGGGGCTCTTGGACGGCTCGTGCATGACTGTCACCGGAAAATATCTGA
CAAGGTTCCCTTCGTGGCCGACCTCAAGCCCAGCGGCAAGTACGTTATGG
AGGACCTTCAGGGGGTGGGCGGCATCCCGGCGGTGCTGAAGATGCTCATG
GAGGAGGGGCTCTTGGACGGCTCGTGCATGACTGTCACCGGAAAGACTAT
GGCGGAGAACTTGGCTGAGCTGCCGGGGTTGAAGGAGGGTCAGGAGATCA
TCAAGCCTATGTCCGACCCCATCAAGTCGTCTGGACACCTGCAGGACTAT
GGCGGAGAACTTGGCTGAGCTGCCGGGGTTGAAGGAGGGTCAGGAGATCA
TCAAGCCTATGTCCGACCCCATCAAGTCGTCTGGACACCTGCAGATCATG
TACGGCAACGTCGCGCCGGGGGGCGCCGTGGCTAAGATTACCGGGAAGGA
GGGGCTCACCTTCTCAGGCGTCGCAAAGATCATGTACGGCAACGTCGCGC
CGGGGGGCGCCGTGGCTAAGATTACCGGGAAGGAGGGGCTCACCTTCTCA
GGCGTCGCAAAGGTGTATGACTCGGAGGAAGACATGCTGGAGTCCCTGGC
GCGAAAAGAGATCACGCCTGGCATGGTGGTGGTCATCCGGTACGAGGGCC
CCAAGGGGGGGCCCGGCATGCCCGAGATGCTCACCCCGTCTTCGGCCATC
ATGGGGGCGGGCCTGGGCAGCTCTGTGGCGCTCATCACAGACGGCCGGTT
CTCGGGGGGATCTCACGGGTGTATGACTCGGAGGAAGACATGCTGGAGTC
CCTGGCGCGAAAAGAGATCACGCCTGGCATGGTGGTGGTCATCCGGTACG
AGGGCCCCAAGGGGGGGCCCGGCATGCCCGAGATGCTCACCCCGTCTTCG
GCCATCATGGGGGCGGGCCTGGGCAGCTCTGTGGCGCTCATCACAGACGG
CCGGTTCTCGGGGGGATCTCACGGATTTATCATCGGACACATCACCCCGG
AGGCGCAAGACGGCGGCCCGATCGCCCTCTTGAAGGACGACGACCCCATC
GTCATCGACGCAGAAAAGCGCACCATCTCTGTCCTTATTTCCTCCATTTA
TCATCGGACACATCACCCCGGAGGCGCAAGACGGCGGCCCGATCGCCCTC
TTGAAGGACGACGACCCCATCGTCATCGACGCAGAAAAGCGCACCATCTC
TGTCCTTATTTCCTCCACCGAGCTGGACAAGCGGCGACAAGACTGGGTGG
CCCCACCTCCGGCCGCCACCAAGGGCACACTGTTCAAGTACATCAAGAAC
GTGGCCTCTGCTTCTGAGGGCTGCGTCACCGACGAATAAACCGAGCTGGA
CAAGCGGCGACAAGACTGGGTGGCCCCACCTCCGGCCGCCACCAAGGGCA
CACTGTTCAAGTACATCAAGAACGTGGCCTCTGCTTCTGAGGGCTGCGTC
ACCGACGAATAA
back to top