mRNA_L-elsbetiae_contig203.6102.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 178 bits (451), Expect = 6.070e-48 Identity = 105/234 (44.87%), Postives = 141/234 (60.26%), Query Frame = 2 Query: 485 ELIREHGIEGCGGSSGGI*ALEAAAEIQHLEIMGMLTSAGVVDTGRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETFINPSDFGGTPLACSIRACRPCSPRIARLLVDAGANTTTAVRISSREGVVIFHNSHLALVDLFLNHKKIAGKDATEEQLHSLQAMRRLLMRVEAVHAVSWLWASDVSPVAHAAAEGTDRATERTSTP-LMSMLPVLKRRTEKPRVLLAALFR 1183 ELI++ G+ GCGG S G+ +L AA Q+++IMG+LT GVVDTGRAL+ Y +E SVKFLL Q G G Y+ ++P FG TPL C+I AC SPRIAR L+D GA+T + V ++ ++ L L K+ GK+ATEEQL SL+A+ RLL ++EAVHAVSWLW S +P+ HA + R T+ P L M VL+ K V+L A++R Sbjct: 198 ELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQ-----AGGGTWYVNNTLDP--FGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYR 424
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 175 bits (444), Expect = 5.800e-47 Identity = 114/238 (47.90%), Postives = 153/238 (64.29%), Query Frame = 2 Query: 482 HELIREHGIEGCGGSSGGI*ALEAAAEIQHLEIMGMLTSAGVVDTGRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETFINPSDFGG-TPLACSIRACRPCSPRIARLLVDAGANTTTAVRISSREGVVIFHNSHLALVDLFLNHK-KIAGKD-ATEEQLHSLQAMRRLLMRVEAVHAVSWLWASDVSPVAHAAAEGTDRATERTSTPLMSMLPVLKRRTEKPRVLLAALFRW 1186 +ELIR+ GI+GCGGSSGG+ AL+ AA+ ++L IM +LT+AGVVDTG AL+ YG E +KFLL Q + R E ++N D GG TPL I+ RP R+ RLLV+AGA+TT+ V + ++ G + L L + K K+ G+ A+ EQLH L+A+RRLL+RVEAVHAVSWLW SD+S + AAA GTDR T ++ + ML V +RR +V LAAL R+ Sbjct: 203 NELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAA-----YVNTRDRGGVTPLLWGIQHYRP---RVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPML-VTRRRARGRKVPLAALLRY 431
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 174 bits (441), Expect = 9.080e-46 Identity = 112/236 (47.46%), Postives = 144/236 (61.02%), Query Frame = 2 Query: 485 ELIREHGIEGCGGSSGGI*ALEAAAEIQHLEIMGMLTSAGVVDTGRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETFINPSDFGG-TPLACSIRACRPCSPRIARLLVDAGANTTTAVRISSREGVVIFHNSHLALVDLFLNHKKIA-GKDATEEQLHSLQAMRRLLMRVEAVHAVSWLWASDVSPVAHAAAEGTDRATERTSTPLMSMLPVLKRRTEKPRVLLAALFRW 1186 ELI+E GIEGC +S G AL AA QHL+IM +LT AGVVDTG+AL G E SVKFLL + K CG YL N D G TPL + C +PRI R+LVDAGA+TT+ V++ + +G V+F+++ LA L L K +A GK AT+E L L+A+ RLL+RV+AVHAVSWLW S + A T+ E L MLP+LKRRT++ L+A L R+ Sbjct: 296 ELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYL----NARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRA----TETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRY 523
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 163 bits (413), Expect = 1.500e-44 Identity = 98/208 (47.12%), Postives = 129/208 (62.02%), Query Frame = 2 Query: 566 QHLEIMGMLTSAGVVDT-GRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETFINPSDFGG-TPLACSIRACRPCSPRIARLLVDAGANTTTAVRISSREGVVIFHNSHLALVDLFLNHKKIAGKDATEEQLHSLQAMRRLLMRVEAVHAVSWLWASDVSPVAHAAAEGTDRATERTSTPLMSMLPVLKRRTEKPRVLLAALFR 1183 QH++IM +LT AGV D G L+ T G+E SV+FLL Q++K + + + N SD G TPL+CSI C +PRI RLLVDAGA+TT+ VR+++ G V ++++ LA+ L K + GK ATEEQLH LQA+RRLL+RV+AVHAVSWLW SD + HA R PL LP+LKRR + V +A L R Sbjct: 3 QHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMS-----VHAYANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRP--PLSLTLPILKRRAKTCHVFVATLLR 203
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 161 bits (407), Expect = 8.770e-42 Identity = 99/235 (42.13%), Postives = 136/235 (57.87%), Query Frame = 2 Query: 485 ELIREHGIEGCGGSSGGI*ALEAAAEIQHLEIMGMLTSAGVVDTGRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETFINPSDFGGTPLACSIRACRPCSPRIARLLVDAGANTTTAVRISSREGVVIFHNSHLALVDLFLNHKKIAGKDATEEQLHSLQAMRRLLMRVEAVHAVSWLWASDVSPVAHAAAEGTDRATERTSTPLMSMLPVLKRRTEKPR--VLLAALFR 1183 EL + G+ GCGG SGG+ +L A Q ++IMG+LT GVVDTGRAL+ +E SVKFLL Q G G Y+ ++P FG TPL C+I AC SPRIAR L+DA A+T + V ++ ++ L L K+ K+ATEEQL SL+A+ RLL +V+AVHAVSWLW S + ++A + R + PL+ +P + R T R V+L A++R Sbjct: 188 ELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQ-----AGGGAWYVNNTLDP--FGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 161 bits (408), Expect = 1.300e-41 Identity = 104/235 (44.26%), Postives = 142/235 (60.43%), Query Frame = 2 Query: 482 HELIREHGIEGCGGSSGGI*ALEAAAEIQHLEIMGMLTSAGVVDTGRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETFINPSDFGGTPLACSIRACRPCSPRIARLLVDAGANTTTAVRISSREGVVIFHNSHLALVDLFLNHKKIAGKDATEEQLHSLQAMRRLLMRVEAVHAVSWLWASDVSPVAHAAAEGTDRATERTSTPLMSMLPVLKRRTEKPRVLLAALFRW 1186 +ELIR+ GI+GCGGSSGG AL AA L+IM +LT AGVVDTG AL+ YG E +KFLL Q + R + + Y+ T + G T L I+ CRP R+ +LLV+AGA+TT+ V I ++ G FH + L L L + + K T E+ + L+ +RRLL+R EAVHAVSWLW SD + HA A+GT R T ++ ++ ++ RRT + LLAAL R+ Sbjct: 203 NELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKST-DRAAYMNTL---NGVGLTSLLDGIQRCRP---RVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGR--SAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRY 428
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 158 bits (399), Expect = 1.880e-40 Identity = 111/242 (45.87%), Postives = 147/242 (60.74%), Query Frame = 2 Query: 485 ELIREHGIEGCGGSSGGI*ALEAAAEIQHLEIMGMLTSAG-VVDTGRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETFINPSDFGGTPLACSIR--ACRPCSPRIARLLVDAGANTTTAV---RISSREGVVIFHNSHLALVDLFLNHKKIAGKDATEEQLHSLQAMRRLLMRVEAVHAVSWLWASDVSP-VAHAAAEG-TDRATERTSTPLMSMLPVLKRRTEKPRVLLAALFRW 1186 E+IR+ GI GCGG SGG+ AL AA+ +HLE M +L AG VVDTG ALI G+ ++VKFLL ++Q + Y+ +P +G TP+ C++ A R CSP+I RLLVDAGANTT AV RI+ R + LA L ++ G+ AT+EQL L+ R LL R EAVHAVSWLWAS P +A AA + T+ A+ +TPL +M P+L+R+ VLL LFR+ Sbjct: 200 EMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQ-----ADADAYVNGTRDP--YGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKT--SETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRY 432
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 147 bits (371), Expect = 1.530e-36 Identity = 105/241 (43.57%), Postives = 139/241 (57.68%), Query Frame = 2 Query: 485 ELIREHGIEGCGGSSGGI*ALEAAAEIQHLEIMGMLTSAGVVDTGRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETFINPSDFGGT-PLACSIRAC----RPCSPRIARLLVDAGANTTTAVRISSREGVVIFHNSHLALVDLFLNHKKIAGKDATEEQLHSLQAMRRLLMRVEAVHAVSWLWAS---DVSPVAHAAAEGTDRATERTSTPLMSMLPVLKRRTEKPRVLLAALFR 1183 ELI+ GIEGCGG S G AL A E + + M +LT AGVVDTG+AL + G+E SVK+LL K G ++N D GT PL SI C + PR+ARLLV+AGA+TTT +R ++ GVV+F + L L L KK+ G ++++L L+ +RRLL++VEAVHA SWLW S D AAE T AT + L +LP+L+RR +P V+ AL R Sbjct: 187 ELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPG-------AYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTT-ATNAAAPKLGRVLPILRRRARRPGVVWTALCR 419
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 147 bits (370), Expect = 2.280e-36 Identity = 103/236 (43.64%), Postives = 134/236 (56.78%), Query Frame = 2 Query: 485 ELIREHGIEGCGGSSGGI*ALEAAAEIQHLEIMGMLTSAGVVDTGRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETFINPSDFGG-TPLACSIRACRPCSPRIARLLVDAGANTTTAVRISSREGVVIFHNSHLALVDLFLNHKKIAGKDATEEQLHSLQAMRRLLMRVEAVHAVSWLWASDVSPVAHAAAEGTDRA-TERTS-TPLMSMLPVLKRRTEKPRVLLAALFR 1183 EL++ GI GC G+S G+ AL AA QHL++M +L AGVVDTG AL+AT + G+E ++KFLL Q+ GEG P D G TPL ++ PCSPR+ RLLVDAGA+ T AVR+ G + L L K + AT +QL +L+A RRLL++VE VHA SWLW A A G RA TE T+ PL S LP++ RR+ + L +FR Sbjct: 199 ELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQK------GEGTARTTYASTPRDGRGHTPLLSAVTT-GPCSPRVVRLLVDAGADATLAVRVPDGFGRSTKYTP-LDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPA---APGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFR 423
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 145 bits (366), Expect = 5.700e-36 Identity = 100/239 (41.84%), Postives = 142/239 (59.41%), Query Frame = 2 Query: 485 ELIREHGIEGCGGSSGGI*ALEAAAEIQHLEIMGMLTSAGVVD-TGRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETFINPS--DFGGTPLACSIRACR--PCSPRIARLLVDAGANTTTAVRISSREGVVIFHNSHLALVDLFLNHKKIAGKDATEEQLHSLQAMRRLLMRVEAVHAVSWLWASDVSPVAHAAAEGTDRATERTSTPLMSMLPVLKRRTEKPRVLLAALFRW 1186 EL+RE GI CGG SGG+ AL AA ++IM ML AGVVD G AL+A G+E +V FLL QQ++R + +++N + D G T L S R + PC+PRI R LVDAGA+TT+AV++ ++ + + L V+ + + AT+EQL L+A RR+L+RV AVHAVSW+W SD +A A + R + + T L ++LPVL+RR + +L LFR+ Sbjct: 174 ELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEER--------WQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPA--NSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRY 402 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig203.6102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig203.6102.1 >prot_L-elsbetiae_contig203.6102.1 ID=prot_L-elsbetiae_contig203.6102.1|Name=mRNA_L-elsbetiae_contig203.6102.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp MGMLTSAGVVDTGRALIATTYYGQELSVKFLLLQQQKRTACGEGVGYLETback to top mRNA from alignment at L-elsbetiae_contig203:35250..36435- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig203.6102.1 ID=mRNA_L-elsbetiae_contig203.6102.1|Name=mRNA_L-elsbetiae_contig203.6102.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1186bp|location=Sequence derived from alignment at L-elsbetiae_contig203:35250..36435- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig203:35250..36435- >mRNA_L-elsbetiae_contig203.6102.1 ID=mRNA_L-elsbetiae_contig203.6102.1|Name=mRNA_L-elsbetiae_contig203.6102.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig203:35250..36435- (Laminarionema elsbetiae ELsaHSoW15)back to top |