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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 542 |
Cds size | 357 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815838.1244395-UTR-L-elsbetiae_contig20274:1363..1479 | 1622815838.1244395-UTR-L-elsbetiae_contig20274:1363..1479 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig20274 1364..1479 + |
1691683136.6877856-UTR-L-elsbetiae_contig20274:1363..1479 | 1691683136.6877856-UTR-L-elsbetiae_contig20274:1363..1479 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig20274 1364..1479 + |
1622815838.148416-UTR-L-elsbetiae_contig20274:1836..1905 | 1622815838.148416-UTR-L-elsbetiae_contig20274:1836..1905 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig20274 1837..1905 + |
1691683136.710642-UTR-L-elsbetiae_contig20274:1836..1905 | 1691683136.710642-UTR-L-elsbetiae_contig20274:1836..1905 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig20274 1837..1905 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815838.137635-CDS-L-elsbetiae_contig20274:1479..1836 | 1622815838.137635-CDS-L-elsbetiae_contig20274:1479..1836 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig20274 1480..1836 + |
1691683136.6993697-CDS-L-elsbetiae_contig20274:1479..1836 | 1691683136.6993697-CDS-L-elsbetiae_contig20274:1479..1836 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig20274 1480..1836 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig20274.6099.1 >prot_L-elsbetiae_contig20274.6099.1 ID=prot_L-elsbetiae_contig20274.6099.1|Name=mRNA_L-elsbetiae_contig20274.6099.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
MWHCVIMVCAEAHRVTVKYTCLLRFELALCWPKGKEEKRSDRVGVSTTGG EPPSNHGKKHTHGLFQRPVGGKEDSPSSRTNILLVYFWNSLKLISVWISL ELIWKHPDNGPYGPVHNP* back to topmRNA from alignment at L-elsbetiae_contig20274:1364..1905+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig20274.6099.1 ID=mRNA_L-elsbetiae_contig20274.6099.1|Name=mRNA_L-elsbetiae_contig20274.6099.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=542bp|location=Sequence derived from alignment at L-elsbetiae_contig20274:1364..1905+ (Laminarionema elsbetiae ELsaHSoW15) CGTAACGCAAAGCGTCTTGTAGTGGCGCGAAGTAGAGGTTCTGCAGTTAG
TTGTGCCAAGACCAATATGACATACATGTGTTGGGGATGTAACCTTGTGA
TAGGTGTATCACTTTGATGTGGCACTGTGTAATAATGGTGTGTGCAGAGG
CTCACAGAGTGACTGTAAAGTACACTTGTTTGTTGAGGTTTGAACTGGCG
CTTTGTTGGCCGAAAGGTAAGGAAGAGAAGAGAAGTGATCGAGTAGGGGT
GAGTACCACGGGGGGCGAGCCTCCAAGCAATCACGGAAAGAAGCACACAC
ACGGGCTATTTCAACGTCCCGTCGGGGGAAAGGAGGATAGTCCATCCTCC
AGAACTAATATCCTTCTGGTTTACTTCTGGAACTCTCTAAAACTAATATC
CGTCTGGATCTCTCTAGAACTAATATGGAAACATCCTGATAATGGCCCAT
ATGGTCCAGTGCATAACCCGTAGGTGCATACAACATGTGTGTGTGTGTGT
GTTTTCGTCCCATTTATTCGGGCGCCTGCCACACGTTTCGGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig20274:1364..1905+ >mRNA_L-elsbetiae_contig20274.6099.1 ID=mRNA_L-elsbetiae_contig20274.6099.1|Name=mRNA_L-elsbetiae_contig20274.6099.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig20274:1364..1905+ (Laminarionema elsbetiae ELsaHSoW15) ATGTGGCACTGTGTAATAATGGTGTGTGCAGAGGCTCACAGAGTGACTGT AAAGTACACTTGTTTGTTGAGGTTTGAACTGGCGCTTTGTTGGCCGAAAG GTAAGGAAGAGAAGAGAAGTGATCGAGTAGGGGTGAGTACCACGGGGGGC GAGCCTCCAAGCAATCACGGAAAGAAGCACACACACGGGCTATTTCAACG TCCCGTCGGGGGAAAGGAGGATAGTCCATCCTCCAGAACTAATATCCTTC TGGTTTACTTCTGGAACTCTCTAAAACTAATATCCGTCTGGATCTCTCTA GAACTAATATGGAAACATCCTGATAATGGCCCATATGGTCCAGTGCATAA CCCGTAGATGTGGCACTGTGTAATAATGGTGTGTGCAGAGGCTCACAGAG TGACTGTAAAGTACACTTGTTTGTTGAGGTTTGAACTGGCGCTTTGTTGG CCGAAAGGTAAGGAAGAGAAGAGAAGTGATCGAGTAGGGGTGAGTACCAC GGGGGGCGAGCCTCCAAGCAATCACGGAAAGAAGCACACACACGGGCTAT TTCAACGTCCCGTCGGGGGAAAGGAGGATAGTCCATCCTCCAGAACTAAT ATCCTTCTGGTTTACTTCTGGAACTCTCTAAAACTAATATCCGTCTGGAT CTCTCTAGAACTAATATGGAAACATCCTGATAATGGCCCATATGGTCCAG TGCATAACCCGTAG back to top
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