mRNA_L-elsbetiae_contig20272.6097.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A6H5KT12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT12_9PHAE) HSP 1 Score: 318 bits (816), Expect = 1.600e-108 Identity = 167/181 (92.27%), Postives = 171/181 (94.48%), Query Frame = 1 Query: 49 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLEGRGEG--GGCRLRNGLASCSKD 585 MNKTYLRYELSETFGVVASPQSN VYDSTGNLAISAALH+VAVWNLRQCSLVRLLSPE ESAAS+AQVT+LLLSPDG TVAAGYSSGLVLLFSLK+GATAVTLHGHRSAVTA RYH SGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDV FLEG G G GGCRLRNGLASCSKD Sbjct: 1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHEVAVWNLRQCSLVRLLSPEGESAASRAQVTSLLLSPDGRTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFLEGGGGGAPGGCRLRNGLASCSKD 181
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: D8LS39_ECTSI (Utp12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS39_ECTSI) HSP 1 Score: 313 bits (802), Expect = 2.090e-97 Identity = 166/185 (89.73%), Postives = 169/185 (91.35%), Query Frame = 1 Query: 49 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLEGRGEG------GGCRLRNGLASCSKD 585 MNKTYLRYELSETFGVVASPQSN VYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPE ESAAS+AQVT+LLLSPDGSTVAAGYSSGLVLLFSLK+GATAVTLHGHRSAVTA RYH SGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDV FL G GGCRLRNGLASCSKD Sbjct: 1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESAASRAQVTSLLLSPDGSTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFLGSGGXXXXXVVPGGCRLRNGLASCSKD 185
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A835Z9P3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P3_9STRA) HSP 1 Score: 203 bits (516), Expect = 3.610e-57 Identity = 107/178 (60.11%), Postives = 134/178 (75.28%), Query Frame = 1 Query: 55 KTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAA-SKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLEGRGEGGGCRLRNGLASCSKD 585 KTYLRY L +TFGV+AS QSNAV+D TGNLAI+AAL +VAVWNLRQ +L+R+L PE + A +K QV+ L LSP+G VAAGY++G++ ++ + +GA AV +GH+SAVTA R++ GALL SG ADTD+++WD VAE G RLRGHRDGVTDVAFL G L G SCSKD Sbjct: 2 KTYLRYVLHDTFGVIASTQSNAVFDKTGNLAITAALQEVAVWNLRQGTLLRMLKPEGDEATIAKGQVSYLALSPNGRRVAAGYTTGVIRVYDVATGAMAVAFNGHKSAVTAARFNDGGALLISGGADTDVILWDMVAERGECRLRGHRDGVTDVAFLPAGGA-----LARGAVSCSKD 174
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A485L7V7_9STRA (Aste57867_17075 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7V7_9STRA) HSP 1 Score: 166 bits (420), Expect = 4.280e-44 Identity = 89/156 (57.05%), Postives = 110/156 (70.51%), Query Frame = 1 Query: 55 KTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFL 522 K+YLRY +FGV+ SP + VYD TG LAI AL V VWN+R + VR L E+ES + QVT L LSPDG VAAGYSSG+V +F L +G VTL GH+++V + Y +GALLASGS DTDI+VWD V++SGLYRLRGH+D VT + FL Sbjct: 19 KSYLRYSAESSFGVICSPNARCVYDLTGQLAICGALKSVIVWNIRTGAQVRTLKGESESDTA-GQVTALCLSPDGLYVAAGYSSGIVRIFKLSNGNVEVTLDGHKNSVESLVYGDNGALLASGSRDTDIIVWDVVSQSGLYRLRGHKDAVTALTFL 173
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A1V9ZWR3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWR3_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.510e-43 Identity = 87/168 (51.79%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 22 RRGWRTCTEMNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLE 525 RR +++ + K+YL+Y S +FGVVASP + +YD TG LAI+ AL V VWN+R VR+L ++E+ + QVT L LSPDG+ VA GYS+G+V +F L +G V+L GH++A+ Y GA+LASGS DTDI+VWD V++SGLYRLRGH+D VT VAF++ Sbjct: 671 RRIYQSFQFLMKSYLKYAPSASFGVVASPNAPCIYDLTGQLAIAGALKQVIVWNIRTGMQVRVLESDSENDMA-GQVTALCLSPDGAYVAVGYSAGVVRIFKLSNGNVEVSLDGHKNAIECLAYGDDGAVLASGSRDTDIIVWDVVSQSGLYRLRGHKDAVTSVAFVD 837
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A7S1XLU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU6_9STRA) HSP 1 Score: 162 bits (409), Expect = 9.650e-43 Identity = 88/180 (48.89%), Postives = 123/180 (68.33%), Query Frame = 1 Query: 49 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQ-VTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLEGRGEGGGCRLRNGLASCSKD 585 M +TYLRY FGV+A+P+ N++Y LA++ +L DV VW+L+Q SL+R L+PE+ + ++A+ V +L L P G VAAGY+SG++ +F K+G + HGHRSAVT GA LA+G++DTD+VVWDAVAE+G+ RLRGHR VT VAFL+ +G GG G+ S S+D Sbjct: 34 MQRTYLRYVPEHAFGVIATPRGNSLYAEGDQLALTPSLRDVGVWHLKQGSLLRRLTPESTTPGTEAEEVASLTLLPGG-RVAAGYTSGVLRVFDYKTGTQELAFHGHRSAVTCADGTADGAFLATGASDTDVVVWDAVAETGVCRLRGHRGAVTAVAFLQPKGSGGNGAGFFGVVSASQD 212
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A6U0TFN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TFN6_9STRA) HSP 1 Score: 154 bits (388), Expect = 8.930e-40 Identity = 85/180 (47.22%), Postives = 118/180 (65.56%), Query Frame = 1 Query: 49 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAA-SKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLEGRGEGGGCRLRNGLASCSKD 585 MN+TYLRY ++FGV+ +P+ N++ + +LAI+ AL D AVWNL+Q SLV+ L PE S +A+ + LL VAAGY+SGL+ +FSL G + LHGHR+ VTA T A LA+G+ DTD+VVWD ++E+G+ RL+GHR +T V+FL+GR G GL S S+D Sbjct: 24 MNRTYLRYVPQQSFGVICTPRGNSILGESEDLAITPALRDAAVWNLKQGSLVKRLRPEGGSGGVQEAEEVSQLLLLGRDRVAAGYTSGLLRVFSLSEGRQELALHGHRTEVTALSCSTDAAFLATGAKDTDVVVWDTISETGVCRLKGHRHAITAVSFLQGRDSGTSVGFF-GLVSASQD 202
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A5D6Y6H3_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6H3_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.230e-39 Identity = 84/160 (52.50%), Postives = 108/160 (67.50%), Query Frame = 1 Query: 49 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSG--ALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFL 522 M K+YLRYE FGVVA+ N ++D TG LAI+ AL DV VWN+RQ S VR L + Q T L LSPDG+ VAAGYS+G V +F L +GA VTL GH SAV A + G A+LASG+ DTD++VWD V+++GL+RL+GH+D VT + F+ Sbjct: 1 MVKSYLRYERETAFGVVAAAAGNVIFDRTGRLAIAPALKDVVVWNVRQGSFVRALRGDG------GQATALALSPDGALVAAGYSTGAVRVFRLATGALEVTLDGHASAVEALAFGARGGAAVLASGARDTDVIVWDLVSQTGLFRLKGHKDAVTALRFV 154
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: E1ZIF0_CHLVA (Utp12 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZIF0_CHLVA) HSP 1 Score: 150 bits (379), Expect = 1.520e-38 Identity = 77/160 (48.12%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 49 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPE-AESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLE 525 M K YLRYEL+ ++GV+ SP N YD +G ++A+L +V+VWN++Q + + L+P ++S + +VT + SP + VA G++ G V L+ L SG A T GHR V+A R+ GALLASGS DTD+VVWD E+GLYRLRGHR VTD+ F+E Sbjct: 1 MVKAYLRYELAGSWGVINSPGCNVCYDRSGRHLLTASLENVSVWNIKQAVVAKTLTPPISQSGKAAGEVTQIAASPSANQVAVGHADGTVRLWDLDSGECAATFSGHRKEVSALRFSRGGALLASGSKDTDVVVWDVAGEAGLYRLRGHRGQVTDLVFVE 160
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A2G5BKB0_COERN (WD40 repeat-like protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BKB0_COERN) HSP 1 Score: 145 bits (366), Expect = 8.460e-37 Identity = 70/159 (44.03%), Postives = 109/159 (68.55%), Query Frame = 1 Query: 49 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLE 525 M K+YLRYE +FGV++SP NAV+D +G +I+ AL V VW++++ + + + + +KA+VT + SP+G A GY+ G + LF L S V L+GHR +++A + ++G +LASG+ DTD+++WD V E+GLYRLRGH+D +TD+AF+E Sbjct: 1 MVKSYLRYEAHSSFGVISSPSGNAVFDHSGRYSITPALEKVIVWDIKKGTKIA----QWADSDNKAEVTRIARSPNGKDYAVGYADGSIRLFDLSSNRVNVVLNGHRGSLSALVFDSTGTILASGARDTDVIIWDVVGEAGLYRLRGHKDEITDIAFVE 155 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig20272.6097.1 >prot_L-elsbetiae_contig20272.6097.1 ID=prot_L-elsbetiae_contig20272.6097.1|Name=mRNA_L-elsbetiae_contig20272.6097.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp PGIGQGTRRGWRTCTEMNKTYLRYELSETFGVVASPQSNAVYDSTGNLAIback to top mRNA from alignment at L-elsbetiae_contig20272:884..2422- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig20272.6097.1 ID=mRNA_L-elsbetiae_contig20272.6097.1|Name=mRNA_L-elsbetiae_contig20272.6097.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1539bp|location=Sequence derived from alignment at L-elsbetiae_contig20272:884..2422- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig20272:884..2422- >mRNA_L-elsbetiae_contig20272.6097.1 ID=mRNA_L-elsbetiae_contig20272.6097.1|Name=mRNA_L-elsbetiae_contig20272.6097.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1170bp|location=Sequence derived from alignment at L-elsbetiae_contig20272:884..2422- (Laminarionema elsbetiae ELsaHSoW15)back to top |