mRNA_L-elsbetiae_contig20242.6091.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig20242.6091.1
Unique NamemRNA_L-elsbetiae_contig20242.6091.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Match: D7G6M3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M3_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 5.200e-85
Identity = 157/303 (51.82%), Postives = 200/303 (66.01%), Query Frame = 1
Query:  142 MDLLCRVAGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYSKHPNSSSLHPCPYCMVGQS------DLDDQLFDINHHRRTRG*FVRAREDLTELSASSKPKAVRTKRSMELGVTVPSPQVPIWPLYDLFDFDPVAGTPVESLHADALGAQAHTHVWLLAKLNQKGRSLVAAIIRER-GSAIYPPGASQLKCIVKNYSSLTGSDKWLLSSIMLLVFRLVLQSPASLQKYFKQNALTALRVKWKSLSKAWAPLPELVQAASALSFAVRSPSFNDAEKTQLHKHAQDMV 1029
            MDL CR+ G LQKGC A V      GE   V V+VF+RGG+L++VADSPQR LM Y KHPNS S  PC YCMV Q+      DL DQL+DI  +RRTRG  +  R  L  L+++   +    + S  LGV  P  +  +W L++  D  P   TPVESLHADAL AQA    +L+A LN KGR L++A +R+R G+ +YPPGA  LK  V +YSSLTGSDKWLL+SI+LLVFR V  + A+++ Y K   L  L   + S+ +A   L +LVQAAS+LSFA+R+PS+ND E  QLHKHAQDM+
Sbjct:    1 MDLFCRLMGDLQKGCTAVVHFPATDGEPAYV-VKVFLRGGLLLLVADSPQRALMCYCKHPNSFSRFPCMYCMVEQTQDNEGGDLGDQLYDIVANRRTRGLMLEGRSQLEALASNPVQQG---QLSSALGVVAPQ-EGDVWLLFEACDIVPSRVTPVESLHADALNAQALVQKYLIALLNTKGRELISATMRQRRGNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVFRAVFHTTATMEMYIKGRELGELVDDYGSMQEARDSLLQLVQAASSLSFALRAPSYNDVEIEQLHKHAQDMI 298          
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Match: A0A6H5KU21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU21_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 8.380e-83
Identity = 153/347 (44.09%), Postives = 203/347 (58.50%), Query Frame = 1
Query:    1 NAHGMGNKKSLGGTYVGWAWNSQTVQRRRDEIHITTLAPPGASSEGEMDLLCRVAGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYSKHPNSSSLHPCPYCMVGQ------SDLDDQLFDINHHRRTRG*FVRAREDLTELSASSKPKAVRTKRSMELGVTVPSPQVPIWPLYDLFDFDPVAGTPVESLHADALGAQAHTHVWLLAKLNQKGRSLVAAIIRERGSAIYPPGASQLKCIVKNYSSLTGSDKWLLSSIMLLVFRLVLQSPASLQKYFKQNALTALRVKWKSLSKAWAPLPELVQAASALSFAVRSPSFNDAEKTQLHKHAQD 1023
            NA GMG K S+GG+Y GWAW +  VQR + + H+ TLA PGA S+GE  L C + G LQKGCL   + +L   E    E  VFVRGG+L++  D   R   + +K PNS S HPC YCMV Q       DL +  FDI+ HRRT G      + L+EL A +     + +RS +LG+  P       PLY      P    PVE LH DALG      V+ L  L+  GR LV+AI+ ++ S +YPPG  +LK +V NY+SL GSDKW L SI+LL+FR+VLQ  +++++  K   +  L  +W +  K    L EL++ AS LSFA+R+PSF D E  QL K A+D
Sbjct:  100 NAFGMGCKHSIGGSYFGWAWRTPAVQRLKHQTHVGTLASPGACSQGETGLQCEILGLLQKGCLG--RCKLTDEEGAAFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQIT---DGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMKTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLARD 441          
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Match: A0A6H5KQX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX1_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 1.050e-79
Identity = 152/347 (43.80%), Postives = 200/347 (57.64%), Query Frame = 1
Query:    1 NAHGMGNKKSLGGTYVGWAWNSQTVQRRRDEIHITTLAPPGASSEGEMDLLCRVAGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYSKHPNSSSLHPCPYCMVGQ------SDLDDQLFDINHHRRTRG*FVRAREDLTELSASSKPKAVRTKRSMELGVTVPSPQVPIWPLYDLFDFDPVAGTPVESLHADALGAQAHTHVWLLAKLNQKGRSLVAAIIRERGSAIYPPGASQLKCIVKNYSSLTGSDKWLLSSIMLLVFRLVLQSPASLQKYFKQNALTALRVKWKSLSKAWAPLPELVQAASALSFAVRSPSFNDAEKTQLHKHAQD 1023
            NA GMG K S+GG+Y GWAW +  VQR     H+ TLA PGA S+GE  L C + G LQ GCL   + +L   E    E  VFVRGG+L++  D   R   + +K PNS S HPC YCMV Q       DL +  FDI+ HRRT G      + L+EL A +     + +RS +LG+  P       PLY      P    PVE LH DALG      V+ L  L+  GR LV+AI+ ++ S +YPPG  +LK +V NY+SL GSDKW L SI+LL+FR+VLQ  +++++  K   +  L  +W +  K    L EL++ AS LSFA+R+PSF D E  QL K A+D
Sbjct:  244 NAFGMGCKHSIGGSYFGWAWRTPAVQRLNHRTHVGTLASPGACSQGETGLQCEILGLLQNGCLG--RCKLTDEEGAAFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQIT---DGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLCQVFFLEMLSTTGRRLVSAIMAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMKTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLARD 585          
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Match: D7G2D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D4_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 2.280e-79
Identity = 155/349 (44.41%), Postives = 201/349 (57.59%), Query Frame = 1
Query:    1 NAHGMGNKKSLGGTYVGWAWNSQTVQRRRDEIHITTLAPPGASSEGEMDLLCRVAGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYSKHPNSSSLHPCPYCMVGQ------SDLDDQLFDINHHRRTRG*FVRAREDLTELSASSKPKAVRTKRSMELGVTVPSPQVPIWPLYDLFDFDPVAGTPVESLHADALGAQAHTHVWLLAKLNQKGRSLVAAIIRERGSAIYPPGASQLKCIVKNYSSLTGSDKWLLSSIMLLVFRLVLQSPASLQKYFKQNALTALRVKWKSLSKAWAPLPELVQAASALSFAVRSPSFNDAEKTQLHKHAQDMV 1029
            N  GMGNK S+GG Y GW W +Q VQR + + H+ TLA  GA  +GE+ L C + G LQ+GCL    +    G   L EV  FVRGG+L+   D P R   + SK  N  S  PCPYCMV Q       DL D  +D++ +RRT G      E    L + S   + +++RSMELG+  P       PLYD     P    PVE LH DALG+     V+LL  L+ +GR LV+A++ +  S +YP G  +LK +V NYSSLTGSDKW L SIMLLVFR V Q   +++K  K+  +  LR  W +  K    L +LVQ AS LS+AVR+PS ND E +QL   A+D+V
Sbjct:  144 NCFGMGNKHSVGGGYFGWPWRTQAVQRLKRQTHVGTLASTGACCQGEIGLQCEILGLLQQGCLGECMLTEDDGTTYLQEV--FVRGGLLMWCGDGPGRAKNLGSKACNHFSRFPCPYCMVEQRDDAFGGDLGDAQYDLDANRRTWGGIT---EGFATLQSLSDDPSEQSRRSMELGLVAPDGTGLPLPLYDAMLIVPTEAVPVERLHFDALGSCQLCQVFLLEMLSTRGRRLVSAVMSQTPSLLYPAGTERLKDMVSNYSSLTGSDKWTLQSIMLLVFRPVFQDFRAMKKNMKRQNINDLREIWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVV 487          
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 6.440e-77
Identity = 151/347 (43.52%), Postives = 203/347 (58.50%), Query Frame = 1
Query:    1 NAHGMGNKKSLGGTYVGWAWNSQTVQRRRDEIHITTLAPPGASSEGEMDLLCRVAGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYSKHPNSSSLHPCPYCMVGQSD------LDDQLFDINHHRRTRG*FVRAREDLTELSASSKPKAVRTKRSMELGVTVPSPQVPIWPLYDLFDFDPVAGTPVESLHADALGAQAHTHVWLLAKLNQKGRSLVAAIIRERGSAIYPPGASQLKCIVKNYSSLTGSDKWLLSSIMLLVFRLVLQSPASLQKYFKQNALTALRVKWKSLSKAWAPLPELVQAASALSFAVRSPSFNDAEKTQLHKHAQD 1023
            NA G+GNK S+GG+Y  W W SQ VQR +++ H+ TLA PGA SEGE  L C + G LQ+GCL    ++   G     E  VFVRGG+L++  D P R   + +K PN+ S  PC YCMV   D      + +  FDI+ HRRT G   R  +  +EL A +     + +RS ELG+  P+      PLY      P    PVE LH DALG      V+ L  L++KGR LV+AI+ ++ S +YPPG  +LK I+ +Y SLTGSDKW L SIMLLVFR+VLQ   S+++  K+  + A + +W +       L  L+Q  S LSFA+R+PS+ND E  QL   A+D
Sbjct:   52 NAWGLGNKHSIGGSYFDWGWRSQAVQRLKNQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARS--EEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSHGDDETGGDVGNPQFDIDKHRRTSG---RTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDALGQCQLCQVFCLELLSKKGRRLVSAIMAQKSSLLYPPGTDKLKDILTDYPSLTGSDKWTLQSIMLLVFRVVLQDIPSMRRNMKKRDMKAFKAEWGTYESVLDALRTLIQMVSLLSFALRAPSYNDKELRQLDNLARD 393          
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 3.140e-75
Identity = 153/349 (43.84%), Postives = 202/349 (57.88%), Query Frame = 1
Query:    1 NAHGMGNKKSLGGTYVGWAWNSQTVQRRRDEIHITTLAPPGASSEGEMDLLCRVAGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYSKHPNSSSLHPCPYCMVGQ------SDLDDQLFDINHHRRTRG*FVRAREDLTELSASSKPKAVRTKRSMELGVTVPSPQVPIWPLYDLFDFDPVAGTPVESLHADALGAQAHTHVWLLAKLNQKGRSLVAAIIRERGSAIYPPGASQLKCIVKNYSSLTGSDKWLLSSIMLLVFRLVLQSPASLQKYFKQNALTALRVKWKSLSKAWAPLPELVQAASALSFAVRSPSFNDAEKTQLHKHAQDMV 1029
            NA GMG K S+GG+Y GWAW +  VQR + + H+ TLA PGA   GE+ L C V G LQ GCL   + +L   E    E  VFVRGG+L++  D   R   + +K PNS S HPC YCMV Q       DL +  FDI+ HRRT G   +  E+L  L+    P+ +  +RS ELG+  P       PLYD     P    PVE LH DALG      ++ L  L+  GR LV AI+ ++ S +YPPG  ++K IV NY+SLTGSDKW L SIMLLVFR+VLQ+  ++++      +  L+ +W +       L EL+  +S LSFA+R+PSF + E  QL K A+D V
Sbjct:  620 NAFGMGCKHSVGGSYFGWAWRAPAVQRLKHQSHVGTLASPGACCRGEIGLQCEVLGLLQNGCLG--RAKLTDQEGAAFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSRHPCAYCMVRQRTDDTSGDLGNPRFDIDKHRRTWGQITKGFEELHGLADD--PRELE-RRSKELGLVEPDASGLPLPLYDAMRVVPTENVPVERLHFDALGQSQLCQIFFLEMLSTAGRRLVGAIMAQKPSLLYPPGTGKIKDIVTNYASLTGSDKWTLQSIMLLVFRMVLQNVPAMRRNMNTREINGLKAEWGTYEGLLEALRELMIRSSLLSFALRAPSFTEPELRQLDKLARDAV 963          
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Match: D7G6T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T4_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 2.410e-70
Identity = 143/297 (48.15%), Postives = 184/297 (61.95%), Query Frame = 1
Query:    1 NAHGMGNKKSLGGTYVGWAWNSQTVQRRRDEIHITTLAPPGASSEGEMDLLCRVAGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYSKHPNSSSLHPCPYCMVGQSD-------------LDDQLFDINHHRRTRG*FVRAREDLTELSASSKPKAVRTKRSMELGVTVPSPQVPIWPLYDLFDFDPVAGTPVESLHADALGAQAHTHVWLLAKLNQKGRSLVAAIIRER--GSAIYPPGASQLKCIVKNYSSLTGSDKWLLSSIMLLVFRLVLQSPASL 846
            NA+GM  K S+GGTYVG    S  +QRRR + ++  +A  G S  GEM+L C+V G LQKGC+A V++    G      ++VF+RGG+L++VADSPQR LM   KHPN S+  PC YCMV Q+              L DQL+DI  + RTRG  + AR  L EL   +   +V+ K S  LGV  P+     W LYD+ D  P    PVE LHADAL AQ     + +  LN +GR L++A +R+R  GS+IYP G + LK IV +Y+SLTGS+KWLL+SIMLLVFR VL S ASL
Sbjct:  458 NANGMQTKNSVGGTYVGMGSTSLALQRRRGQANVVAVASNGCSCTGEMELQCQVMGELQKGCIAIVEMPAVDGA-PAHRLKVFLRGGLLLLVADSPQRALMYKGKHPNKSTRFPCIYCMVEQTQDAEGEEGTDPGGPLGDQLYDIESNARTRGGLLAARRRLLELKDQA---SVQAKESTALGVVAPARADERWLLYDVMDIVPGRTMPVEILHADALNAQGLVQRFFIGLLNTEGRRLISATLRQREGGSSIYPVGEAPLKDIVTDYASLTGSNKWLLASIMLLVFRPVLHSAASL 750          
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 1.290e-61
Identity = 146/359 (40.67%), Postives = 193/359 (53.76%), Query Frame = 1
Query:    1 NAHGMGNKKSLGGTYVGWAWNSQTVQRRRDEIHITTLAPPGASSEGEMDLLCRVAGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYSKHPNSSSLHPCPYCMVGQ------SDLDDQLFDINHHRRTRG*FVRAREDLTELSASSKPKA---------VRTKRSMELGVTVP-SPQVPIWPLYDLFDFDPVAGTPVESLHADALGAQAHTHVWLLAKLNQKGRSLVAAIIRERGSAIYPPGASQLKCIVKNYSSLTGSDKWLLSSIMLLVFRLVLQSPASLQKYFKQNALTALRVKWKSLSKAWAPLPELVQAASALSFAVRSPSFNDAEKTQLHKHAQDMV 1029
            N  GMGNK S+GGTY GW W SQ VQR R + H+ TLA  GAS  GE+ L C + G LQ+GC+    ++   G     EV  FVRGG+L+   D P R  ++ SK  N  S  PCPYCMV Q       DL +  +DI+ HRRT G      + L  L+ +    +         +RT  +     T   SP  P W L+          +   S+  D LG+     V  L  L+ +GR LV+A++ +  S +YP G  +LK IV NYSSLTGSDKW L SIMLLVFR VL +  +++K  K+  +  LR  W +  K    L +L++ AS LS AVR+PS ND E  QL   A+D+V
Sbjct:  325 NCFGMGNKHSVGGTYFGWPWRSQAVQRLRQQTHVGTLASTGASCAGEIGLQCEILGLLQRGCVGECTLKDDDGATYNQEV--FVRGGLLMWCGDGPGRAKVLGSKACNHFSRFPCPYCMVEQRDNITGGDLGNAQYDIDAHRRTWGQITAGFDTLKSLADNPAEHSRQSMVYWGLLRTPTAPPCPCTTQCSPSRPRWSLW----------SGCTSMPCD-LGSCQLCQVSCLEMLSTQGRRLVSAVVAQNPSLLYPAGTERLKDIVTNYSSLTGSDKWTLQSIMLLVFRPVLANVGAMKKNMKRQDIAELRDVWGTDEKVLEVLQKLIEVASHLSCAVRAPSHNDLELAQLDLLARDVV 670          
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Match: A0A6H5JWQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ6_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 1.190e-57
Identity = 139/336 (41.37%), Postives = 180/336 (53.57%), Query Frame = 1
Query:   55 AWN-SQTVQRRRDEIHITTLAPPGASSEGEMDLLCRVAGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYSKHPNSSSLHPCPYCMVGQS-------DLDDQLFDINHHRRTRG*FVRAREDLTELSASSKPKAVRTKRSMELGVTVP---SPQVPIWPLYDLFDFDPVAGTPVESLHADALGAQAHTHVWLLAKLNQKGRSLVAAIIRERGSAIYPPGASQLKCIVKNYSSLTGSDKWLLSSIMLLVFRLVLQSPASLQKYFKQNALTALRVKWKSLSKAWAPLPELVQAASALSFAVRSPSFNDAEKTQLHKHAQDMV 1029
            AW+ S  VQRRR E  ++T+A PGA  EGE+ L   V G                         +F+RGG L  V+DSPQR +++Y KHPN+S+  PCPYC   Q        DL +  +D+  +RRT G    A++   EL A       +TKRS ELG+  P   S  V   PL+D    +P    PVESLHADAL A A       +   ++        I  +GS +YPP  + LK I  NYSSL GSDKWLL SI+LLV R VL    +L++Y K   L AL+  W       A L +L+Q ASAL+FAVRSPSF  AE+ +L +HA+D V
Sbjct:  211 AWSMSIKVQRRRSETLLSTIASPGACVEGEISLQASVMG------------------------EIFLRGGPLTWVSDSPQRAILLYCKHPNNSTKLPCPYCKADQEERLPTCGDLGNARYDVEANRRTWG---EAQDGWRELQALDLAPNEQTKRSAELGIMAPTGVSGGVLGRPLWDKVFINPARHVPVESLHADALTAGAGVGAGFFSGPPERSWPGSEFSILWQGSTLYPPATAPLKDICTNYSSLKGSDKWLLGSILLLVSRCVLHDATALKEYVKPRELQALKDTWGGEQAVLAQLRKLLQVASALTFAVRSPSFYKAERKKLMEHARDTV 519          
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Match: A0A6H5KJ80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ80_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 3.750e-55
Identity = 136/385 (35.32%), Postives = 185/385 (48.05%), Query Frame = 1
Query:   28 SLGGTYVGWAWNSQTVQRRRDEIHITTLAPPGASSEGEMDLLCRVAGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYSKHPNSSSLHPCPYCMVGQSDLDDQLFDINHHRRTRG*FVRAREDLTELSASSKPKAVRTKRSMELGVTVPSPQVPIWPLYDLFDFDPVAGTPVESLHADALGAQAHTHVWLLAKLNQKGRSLVAAIIRERGSAIYPPGASQLKCIVK-----------------------------------NYSSLTGSDKWLLSSIMLLVFRLVLQSPASL------------------QKYFKQNALTALRVKWKSLSKAWAPLPELVQAASALSFAVRSPSFNDAEKTQLHKHAQD 1023
            S+GG+Y GW W SQ VQR +++ H+ TLA P A S+GE  L C + G LQ+GCL    ++   G     E  VFVRGG+L++  D   R   + +K PN+ S  PC YCM               HRRT G   R  +  +EL A +     + +RS ELG+  P+      PLY      P    PVE LH DALG      V+ L  L++KGR +V+AI+ ++ S +YPPG  +LK I+                                    +Y SLTGSDKW L SIMLLVFR+VLQ   S+                  ++  K+  + A + +W +       L  L+Q  S LSFA+R+PS ND E   L   A+D
Sbjct:   61 SIGGSYFGWGWRSQAVQRLKNQTHVGTLATPEARSQGENGLHCEILGLLQQGCLGRRVLRDEQGARS--EEEVFVRGGLLLMCGDGRGRSKCLGTKAPNNCSKFPCSYCM---------------HRRTWG---RTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDALGQCQLCQVFCLELLSKKGRRIVSAIMAQKSSLLYPPGTYKLKDILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYPSLTGSDKWTLQSIMLLVFRVVLQDIPSMVRSQCDVSRRPNPKHLPQRRNMKKRDMKAFKAEWGTYESVLDALRTLIQMVSLLSFALRAPSNNDKELRPLDNLARD 425          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20242.6091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6M3_ECTSI5.200e-8551.82Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KU21_9PHAE8.380e-8344.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQX1_9PHAE1.050e-7943.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2D4_ECTSI2.280e-7944.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLQ7_9PHAE6.440e-7743.52Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9M0_9PHAE3.140e-7543.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6T4_ECTSI2.410e-7048.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9E1_9PHAE1.290e-6140.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWQ6_9PHAE1.190e-5741.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ80_9PHAE3.750e-5535.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20242contigL-elsbetiae_contig20242:25..2581 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1029
Cds size411
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20242.6091.1prot_L-elsbetiae_contig20242.6091.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig20242 1386..2569 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815837.1246364-UTR-L-elsbetiae_contig20242:24..2071622815837.1246364-UTR-L-elsbetiae_contig20242:24..207Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20242 25..207 -
1691683136.0182977-UTR-L-elsbetiae_contig20242:24..2071691683136.0182977-UTR-L-elsbetiae_contig20242:24..207Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20242 25..207 -
1622815837.1411185-UTR-L-elsbetiae_contig20242:804..10351622815837.1411185-UTR-L-elsbetiae_contig20242:804..1035Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20242 805..1035 -
1691683136.0267308-UTR-L-elsbetiae_contig20242:804..10351691683136.0267308-UTR-L-elsbetiae_contig20242:804..1035Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20242 805..1035 -
1622815837.1529155-UTR-L-elsbetiae_contig20242:1193..13851622815837.1529155-UTR-L-elsbetiae_contig20242:1193..1385Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20242 1194..1385 -
1691683136.0343053-UTR-L-elsbetiae_contig20242:1193..13851691683136.0343053-UTR-L-elsbetiae_contig20242:1193..1385Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20242 1194..1385 -
1622815837.1897585-UTR-L-elsbetiae_contig20242:2569..25811622815837.1897585-UTR-L-elsbetiae_contig20242:2569..2581Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20242 2570..2581 -
1691683136.060019-UTR-L-elsbetiae_contig20242:2569..25811691683136.060019-UTR-L-elsbetiae_contig20242:2569..2581Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20242 2570..2581 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815837.1654475-CDS-L-elsbetiae_contig20242:1385..15651622815837.1654475-CDS-L-elsbetiae_contig20242:1385..1565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig20242 1386..1565 -
1691683136.042132-CDS-L-elsbetiae_contig20242:1385..15651691683136.042132-CDS-L-elsbetiae_contig20242:1385..1565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig20242 1386..1565 -
1622815837.1800172-CDS-L-elsbetiae_contig20242:2338..25691622815837.1800172-CDS-L-elsbetiae_contig20242:2338..2569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig20242 2339..2569 -
1691683136.0501623-CDS-L-elsbetiae_contig20242:2338..25691691683136.0501623-CDS-L-elsbetiae_contig20242:2338..2569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig20242 2339..2569 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig20242.6091.1

>prot_L-elsbetiae_contig20242.6091.1 ID=prot_L-elsbetiae_contig20242.6091.1|Name=mRNA_L-elsbetiae_contig20242.6091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=137bp
MGNKKSLGGTYVGWAWNSQTVQRRRDEIHITTLAPPGASSEGEMDLLCRV
AGALQKGCLASVQVQLPGGEWQLVEVRVFVRGGILVIVADSPQRVLMMYS
KHPNSSSLHPCPYCMVGQSDLDDQLFDINHHRRTRG*
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mRNA from alignment at L-elsbetiae_contig20242:25..2581-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig20242.6091.1 ID=mRNA_L-elsbetiae_contig20242.6091.1|Name=mRNA_L-elsbetiae_contig20242.6091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2557bp|location=Sequence derived from alignment at L-elsbetiae_contig20242:25..2581- (Laminarionema elsbetiae ELsaHSoW15)
AACGCGCATGGGATGGGCAATAAAAAATCCCTCGGCGGTACGTACGTAGG GTGGGCATGGAATAGTCAAACCGTGCAGAGGCGCAGAGACGAGATACACA TAACCACCCTCGCTCCCCCAGGGGCTTCATCCGAGGGCGAAATGGACCTG CTTTGTAGAGTAGCGGGCGCGCTTCAAAAGGGCTGCCTCGCGTCTGTCCA AGTCCAGCTTCCCGGCGGAGAATGGCAGCTAGTCGAGGTGCGTGTGCATT TATGTGTGTCGCCAGGTTGTCGGTCGTAACATCATATAGGAGGGTTACCG TAATATACCATTGTGACTGCCCCCCCCCAAAAAAAAAAAAAAACGACTGG GGGCACTTCAAAAATATTGTGTCAGCGGCGCTCGTTTATATTTATGTATT GCCCCTTTACCTTTTTGAGAAGGCCCCGCGGCAATATTATTTCGCTGATG TTTGTCTCCTCGGGGAGGAAGTCACATTTTTCCTGCCCCGGGGCGCTCGT TTTTATTTATGTATTGCCCCTCTACCTTTTTGAGAAGGCCCCGCGGCAAT ATTATTTCGCTGATGTTTGCCTGTCTCCCCGGGGAGGAAGTCACATTTTT CCTGTTTTATGTTCCAGTAGCGTGCTGTATTGTTGTCTGTTACTGTGCGC TTGCTCGTTGTCCGACATCGTGAGCGTCCGCAAGGTGAAGCGCGTGTGTA CTGCAACAACACGTACACCACTTTTCGGCCCGGGGAATTTTTTGTTGTTT TGGGCGAAAGATCGCCCCCCTGCCTTTGTGAACACCCCGGGGCATTGTTT TTCGGCTGAAAATAGAGGTTACCCCCCGGGGCACCCACCAACTGGATATT ACGGCAGTCTGTAAAATTAGGGTTAGGGTTAGGGTTATAGCTTTCATGTG CCTTTGTACACGTGTATGATGTACCCTATACATACATGTATGTAATACTT CTCGCAACCACTACACAGTACACGTCTTACGTCCGTGTCCCTTGCGAATT CCTTCTGGCAATGAAGGTCTTCGTCAGAGGTGGAATATTGGTCATCGTCG CGGACTCCCCACAAAGGGTTTTGATGATGTACTCGAAGCATCCTAACTCG TCGAGTCTTCACCCTTGCCCGTACTGCATGGTCGGGCAAAGCGACTTAGA CGACCAACTCTTTGATATAAATCATCACAGAAGGACAAGGGGATAGTTCG TTCGGGCGCGGGAGGATTTGACTGAGTTGTCAGCGTCCAGCAAGCCTAAG GCGGTCCGAACGAAGCGCTCGATGGAACTAGGAGTTACGGTGCCCAGCCC GCAGGTCCCAATATGGCCACTATACGACCTGTTCGATTTCGACCCGGTCG CCGGCACGCCAGTGGAGAGTCTGCATGCTGATGCCTTGGTAAGTCTGCCG CCTACAACACGTACGACGAGCGATTGTTTGGATAGTTCTATCACACCCCC AGCGAATCTCGACTAGACGTACGGCGTATTATGGACTCTCTCTCGCGTTG TATTAATGTGCGCATGTTTGCCCCTTGGTTGTCCTGATAACAACAGGGTG CACAGGCACACACCCACGTTTGGCTGCTGGCCAAGCTTAACCAAAAAGGC CGGAGCCTTGTGGCCGCCATCATCAGGGAACGTGGGTCAGCGATATATCC GCCAGGTGCATCCCAGCTCAAGTGCATCGTGAAGAATTATTCTTCCCTAA CCGGCAGCGACAAGTGGCTCCTCTCCTCGATCATGCTGCTGGTGTTCCGC CTCGTGCTTCAAAGCCCAGCTTCCCTGGTGAGTACCTACTACGAGATAAT GTATTATGCGCACCGACCAAACCCGCATATTTATTTGGGCAAATATTATG ATTTGACCTACGGTTACTAGGCACATATCTATGAGCCCAATATCTAAATA TATATTGCTTCTTGGGGGGGGAGGCGGGGGCATCCAGGACGCCTCCCCAG ATACGTTGATTTTAAGTTGCTGTATGTGTACATATGTAAGTCATACAAGT ACACATATCCTTCTGAAGCGGTCGATTCCCCGTGCGTCGCCCGGCTCGCG GCTCGTTTCGTTGTTTTCCGTGAAGATCTTGCCCCTGAGCCTCGGAACTG AATCAAATGATTGTCTATACGCGATATGTTCCTGTAGCGAAGTTTGGGCC TCGAATGCCTAGTGGCCCCAAGGGACAAAAGCCTACCGGGAAGAACTTCA TCTAAAGTATCTATACCGTACCCAAATACCTACATTTTCAAGAAAACTTC GAAGAATATCGCTTGCAAAGTTGCGTGCCTTTTAGGGCGACTTGTACTCA AACCGAACCACCACTCTAATCACACTAGGACCCTGCCACATATCTTTTCA CCCTGACAACCGGGACCGCGGCAGCAAAAATACTTTAAACAGAATGCTCT AACGGCGTTGAGGGTCAAGTGGAAGTCTCTCTCGAAAGCCTGGGCTCCTT TGCCGGAGCTTGTGCAGGCCGCCTCGGCGCTGTCGTTTGCCGTGCGTTCA CCTTCGTTCAACGACGCGGAGAAGACCCAGCTGCACAAACACGCTCAAGA TATGGTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig20242:25..2581-

>mRNA_L-elsbetiae_contig20242.6091.1 ID=mRNA_L-elsbetiae_contig20242.6091.1|Name=mRNA_L-elsbetiae_contig20242.6091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=822bp|location=Sequence derived from alignment at L-elsbetiae_contig20242:25..2581- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCAATAAAAAATCCCTCGGCGGTACGTACGTAGGGTGGGCATGGAA
TAGTCAAACCGTGCAGAGGCGCAGAGACGAGATACACATAACCACCCTCG
CTCCCCCAGGGGCTTCATCCGAGGGCGAAATGGACCTGCTTTGTAGAGTA
GCGGGCGCGCTTCAAAAGGGCTGCCTCGCGTCTGTCCAAGTCCAGCTTCC
CGGCGGAGAATGGCAGCTAGTCGAGGTGCGTATGGGCAATAAAAAATCCC
TCGGCGGTACGTACGTAGGGTGGGCATGGAATAGTCAAACCGTGCAGAGG
CGCAGAGACGAGATACACATAACCACCCTCGCTCCCCCAGGGGCTTCATC
CGAGGGCGAAATGGACCTGCTTTGTAGAGTAGCGGGCGCGCTTCAAAAGG
GCTGCCTCGCGTCTGTCCAAGTCCAGCTTCCCGGCGGAGAATGGCAGCTA
GTCGAGGTGCGTGTCTTCGTCAGAGGTGGAATATTGGTCATCGTCGCGGA
CTCCCCACAAAGGGTTTTGATGATGTACTCGAAGCATCCTAACTCGTCGA
GTCTTCACCCTTGCCCGTACTGCATGGTCGGGCAAAGCGACTTAGACGAC
CAACTCTTTGATATAAATCATCACAGAAGGACAAGGGGATAGGTCTTCGT
CAGAGGTGGAATATTGGTCATCGTCGCGGACTCCCCACAAAGGGTTTTGA
TGATGTACTCGAAGCATCCTAACTCGTCGAGTCTTCACCCTTGCCCGTAC
TGCATGGTCGGGCAAAGCGACTTAGACGACCAACTCTTTGATATAAATCA
TCACAGAAGGACAAGGGGATAG
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