mRNA_L-elsbetiae_contig20239.6088.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig20239.6088.1
Unique NamemRNA_L-elsbetiae_contig20239.6088.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 9.770e-49
Identity = 196/331 (59.21%), Postives = 222/331 (67.07%), Query Frame = 1
Query:    4 WPRGPRNELHRAASQGSTERTTAFL-SRGLINIDQGNPRGFTPLMCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ANANPLLAM-TPSSRATSLPRATLLPLDGAACTGRPDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAGVVDTGVALFTAAGSAWEAAVKLLLQQRR---LRDPIFNYVNSCDSSDI---TPLFRSVSVITDREGVPRLISPKVVRLLIDAGADTSSAV 969
            WPRGP+N+LHRAA+ GS ER  A L SR  I ID G   G+TPLM AA  G SRVV+ILL +GAN+S+  + G +ALH            XXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ANPLL   TPS         T +PLD AA  G+ +VVRELIKQV IKGC GASGGV AL +A+  +NVDVM++L DAGV+DTG AL TAAG   EA VKLLLQQR        ++ YVN  D+ D+   TPL  S+    D        SP+VVRLL+DAGADT SAV
Sbjct:   11 WPRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSG-------VTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVN--DTHDLVGRTPLLCSI----DGGMAGFRCSPRVVRLLVDAGADTVSAV 328          
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.670e-41
Identity = 135/340 (39.71%), Postives = 172/340 (50.59%), Query Frame = 1
Query:   22 NELHRAASQGSTERTTAFLSRGLINIDQGNPRGFTPLMCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ANANPLLAMTPSSRATSLPRATLLPLDGAACTGRPDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAGVVDTGVALFTAAGSAWEAAVKLLLQQRRLRDPIF---NYVNSCDSSDITPLFRSVSVITDREGVPRLISPKVVRLLIDAGADTSSAVRVMHL-GKLVFNDTVLTLT 1023
            N+LHRA   GS E T A L+ G + IDQ N  G TPLM A   G+SR+ K+L+ +GAN+SIA   G +ALH C                                       XXXXXXXXXXXXX                               NANPLL  T     T     T +PLD AA  G  DVVRELI+++GI+GC   S G  AL  A+  +++D+MAIL +AGVVDTG AL+ AAG   EA+VK LL+ R           Y+N+ D +  TPL         +       +P++VR+L+DAGADT+S V+VM+L G +VFNDT L  T
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNT-----TTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQ-------APRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFT 434          
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.310e-39
Identity = 146/267 (54.68%), Postives = 168/267 (62.92%), Query Frame = 1
Query:    4 WPRGPRNELHRAASQGSTERTTAFL-SRGLINIDQGNPRGFTPLMCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ANANPLLAMTPSSRATSLPRATLLPLDGAACTGRPDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAGVVDTGVALFTAAGSAWEAAVKLLLQQR 798
            WPRGP+N+LHRAA+ GS ER  A L SR  I+I+QG   G+TPLM AA  G SRVV+IL  +GAN+S+  D   +ALH                                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ANPLL    SS  T       +PLD AA  G+ +VV+EL++QV IKGC GASGGVDAL +A+  +NVDVMA+L D GV+DTG AL TAAG   EA VKLLLQQR
Sbjct:   11 WPRGPQNDLHRAANDGSIERVVALLASRPSIDINQGAEYGWTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTSEGETPLHLVADSGCWEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTSSGVT------FVPLDTAAEYGQTEVVQELVQQVSIKGCGGASGGVDALRLAALSQNVDVMAVLADVGVMDTGEALITAAGRNDEAGVKLLLQQR 271          
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 4.000e-38
Identity = 193/323 (59.75%), Postives = 227/323 (70.28%), Query Frame = 1
Query:   10 RGPRNELHRAASQGSTERTTAFLSRGLINIDQGNPRGFTPLMCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLAMTPSSRATSLPRATLLPLDGAACTGRPDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAGVVDTGVALFTAAGSAWEAAVKLLLQQRRLRDPIFNYVNSC-DSSDITPLFRSVSVITDREGVPRLISPKVVRLLIDAGADTSSAVRV 975
            RGPRNELH+AA  GS++RT + L+ G I+IDQG+PRG+TPLM AA EG+S V+K+LL RGA++    D           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    PLL    SS  T       +PLDGAA  G   V REL+++ GI+GCAGAS GVDAL  A+ ++++DVMA+L DAGVVDTG AL        E A+K LL+Q+        Y ++  D    TPL  +V+            SP+VVRLL+DAGAD + AVRV
Sbjct:    9 RGPRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNT------FVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTTGP--------CSPRVVRLLVDAGADATLAVRV 317          
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 6.310e-38
Identity = 159/347 (45.82%), Postives = 193/347 (55.62%), Query Frame = 1
Query:    1 QWPRGPRNELHRAASQGSTERTTAFLSRGLINIDQGNPRGFTPLMCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ANANPLLAMTPSSRATSLPRATLLPLDGAACTGRPDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAGVVDTGVALFTAAGSAWEAAVKLLLQQRRLRDPIFN--YVNSCDSSDITPLFRSVSVITDREGVPRLISPKVVRLLIDAGADTSSAVRVMH-LGKLVFNDTVLTLTNN 1029
            Q PRGP N LH AA  GS E T   L+ G  +IDQGN  G+T LM A+  GY+R+V ++L +GA +SI              XXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXX                              A A+PLL   P          T LPLD AA  G P+VV ELI+QVGI GC G+SGGV AL  A+Q +N+++M IL +AGVVDTG+AL  AAG   E  +K LL+Q R R  +    YVN+ D   +TPL   +          +   P+VVRLL++AGADT+S V V + LG    + T L LT N
Sbjct:    9 QRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGR-----TFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGI----------QHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMN 340          
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 1.350e-36
Identity = 170/337 (50.45%), Postives = 206/337 (61.13%), Query Frame = 1
Query:   22 NELHRAASQGSTERTTAFLSRGLINIDQGNPRGFTPLMCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ANANPLLAMTPSSRATSLPRATLLPLDGAACTGRPDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAGVVDTGVALFTAAGSAWEAAVKLLLQQRRLRDPIFNYVNSCDSSDITPLFRSVSVITDREGVPRLIS-PKVVRLLIDAGADTSSAVRVMH-LGKLVFNDTVLTLT 1023
            N LH AA +GSTERT   L+ G  +I+QG    +TPL+ AA  G+S V+ ILL +GAN+SI  D+GV+ALH+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               ANANPL+        T  P  TLLPLD AA  G   V+RELI++VGI+GC G S G  AL +A +   V  MA+L  AGVVDTG AL  +AG   EA+VK LLQ          YVN  D +  TPL  S+ V     GV    S P+V RLL++AGADT++ +R  + +G ++F+ T L LT
Sbjct:    2 NSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLI--------TRAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGAYVNVRDRNGTTPLLSSIYVC----GVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLT 326          
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 3.010e-34
Identity = 193/332 (58.13%), Postives = 223/332 (67.17%), Query Frame = 1
Query:    1 QWPRGPRNELHRAASQGSTERTTAFLS-RGLINIDQGNPRGFTPLMCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLAM-TPSSRATSLPRATLLPLDGAACTGRPDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAG-VVDTGVALFTAAGSAWEAAVKLLLQQRRLRDPIFNYVNSC-DSSDITPLFRSVSVITDREGVPRLISPKVVRLLIDAGADTSSAVRVMHL 984
            Q  RGP N LH+AA  GS E T A LS RG  +ID GNP   T LM A  +GY+ VV  LL +GAN+S               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    A ANPLL   TP          + +PL+ AA  G PDV RE+I+QVGI+GC G SGGV+AL  A+ EE+++ MA+L+DAG VVDTG AL  AA +    AVK LL++R+       YVN   D    TP+  +V V     G  RL SPK+VRLL+DAGA+T+ AV V  +
Sbjct:    6 QVTRGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLLCSHTPMG-------VSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADA--YVNGTRDPYGRTPVMCAVDV-----GAGRLCSPKIVRLLVDAGANTTRAVGVTRI 323          
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 7.310e-34
Identity = 145/293 (49.49%), Postives = 178/293 (60.75%), Query Frame = 1
Query:    4 WPRGPRNELHRAASQGSTERTTAFLSRGLINIDQGNPRGFTPLMCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ANANPLLAMTPSSRATSLPRATLLPLDGAACTGRPDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAGVVDTGVALFTAAGSAWEAAVKLLLQQRRLR-DPIFNYVNSC-DSSDITPLFRSV 873
            WPRGP+NELH AA  GST+RT A LS GLINI+QG+P G+TPLM A+  GY+R+V+IL+  GAN+ I  D G +A      XXXXXXXXXXX                          XXXXXXXXXXXX           XXXXXXXXXXXXXXXXXX A A+PLL         ++ R   +PLD AA  GR  VVRE + Q+GI GC G S G  AL  A++E+ VD MA+L +AGVVDTG+AL  A     E ++K LL+Q++L+ +P   YV+   D    TPL  S+
Sbjct:    9 WPRGPKNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRL------NVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGAYVDEARDPFGRTPLLCSI 295          
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 5.670e-33
Identity = 190/328 (57.93%), Postives = 224/328 (68.29%), Query Frame = 1
Query:    4 WPRGPRNELHRAASQGSTERTTAFLS-RGLINIDQGNPRGFTPLMCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLA-MTPSSRATSLPRATLLPLDGAACTGRPDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAGVVDTGVALFTAAGSAWEAAVKLLLQQRRLRDPIFN--YVNSCDSSDITPLFRSVSVITDREGVPRLISPKVVRLLIDAGADTSSAVRV 975
            WPRGP NELH AA  GS ER  A LS R  I+++QG+  G TPLM A   G+ RVV+ILL  GANMSI  D G  AL     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NA+PLL  + PS+          LPLD A       VVREL++++GI+ C G S GVDAL +A    +V ++A+L  AGVVD G AL  AA   +EA+VK LL+Q   +       YVN  +   +TPL  +++            S ++VRLL+DAGADT++A R+
Sbjct:   10 WPRGPMNELHLAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLGNVLPSTGGVCF-----LPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNKLNRFGLTPLLENITC--------GHCSARIVRLLVDAGADTTAAYRL 324          
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 1.520e-31
Identity = 188/330 (56.97%), Postives = 216/330 (65.45%), Query Frame = 1
Query:    1 QWPRGPRNELHRAASQGSTERTTAFLSRGLINIDQGNPRGFTPLMCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLAMTPSSRATSLPRATL----LPLDGAACTGRPDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAGVVDTGVALFTAAGSAWEAAVKLLLQQRR-LRDPIFNYVNSC-DSSDITPLFRSVSVITDREGVPRLISPKVVRLLIDAGADTSSAVR 972
            Q PR   N+LH AA  GST  T A LS G I+ID G+  G TPLM A    +  VV ILL +GA++S   D G +ALH+ A      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ANPLL            R  L    LPLD AA  GR  VV EL+++ GI+GC G +GGV AL +A+ + ++DVM  L  AGVVDTG+AL  A        VK LLQQ+         YV+   D    TPL  ++ V     G+ +  SPKVVRLL+DAGADT+S VR
Sbjct:    9 QSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLT-----------RVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDV-----GLNQSCSPKVVRLLVDAGADTTSIVR 322          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20239.6088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL33_9PHAE9.770e-4959.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI1.670e-4139.71EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LNF8_ECTSI1.310e-3954.68EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LL76_ECTSI4.000e-3859.75EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KJA9_9PHAE6.310e-3845.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJF9_ECTSI1.350e-3650.45EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI3.010e-3458.13EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7G1I8_ECTSI7.310e-3449.49EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FY91_ECTSI5.670e-3357.93EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
D7FVK3_ECTSI1.520e-3156.97EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20239contigL-elsbetiae_contig20239:1072..2381 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score138.3
Seed ortholog evalue6e-30
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1310
Cds size900
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20239.6088.1prot_L-elsbetiae_contig20239.6088.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig20239 1204..2103 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815836.8810747-UTR-L-elsbetiae_contig20239:1071..12031622815836.8810747-UTR-L-elsbetiae_contig20239:1071..1203Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20239 1072..1203 +
1691683135.8829355-UTR-L-elsbetiae_contig20239:1071..12031691683135.8829355-UTR-L-elsbetiae_contig20239:1071..1203Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20239 1072..1203 +
1622815836.9050486-UTR-L-elsbetiae_contig20239:2103..23811622815836.9050486-UTR-L-elsbetiae_contig20239:2103..2381Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20239 2104..2381 +
1691683135.9095354-UTR-L-elsbetiae_contig20239:2103..23811691683135.9095354-UTR-L-elsbetiae_contig20239:2103..2381Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig20239 2104..2381 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815836.8926206-CDS-L-elsbetiae_contig20239:1203..21031622815836.8926206-CDS-L-elsbetiae_contig20239:1203..2103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig20239 1204..2103 +
1691683135.9005387-CDS-L-elsbetiae_contig20239:1203..21031691683135.9005387-CDS-L-elsbetiae_contig20239:1203..2103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig20239 1204..2103 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig20239.6088.1

>prot_L-elsbetiae_contig20239.6088.1 ID=prot_L-elsbetiae_contig20239.6088.1|Name=mRNA_L-elsbetiae_contig20239.6088.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=300bp
MCAAGEGYSRVVKILLIRGANMSIAGDSGVSALHICALKGHVAVTVDLAK
AGAELDAEDVEGATPLHLAAQRGHVGVMAVLIEAGADVDRLAGDGRTPLY
IAAFDGRLNAVKELLRANANPLLAMTPSSRATSLPRATLLPLDGAACTGR
PDVVRELIKQVGIKGCAGASGGVDALDVASQEENVDVMAILMDAGVVDTG
VALFTAAGSAWEAAVKLLLQQRRLRDPIFNYVNSCDSSDITPLFRSVSVI
TDREGVPRLISPKVVRLLIDAGADTSSAVRVMHLGKLVFNDTVLTLTNN*
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mRNA from alignment at L-elsbetiae_contig20239:1072..2381+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig20239.6088.1 ID=mRNA_L-elsbetiae_contig20239.6088.1|Name=mRNA_L-elsbetiae_contig20239.6088.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1310bp|location=Sequence derived from alignment at L-elsbetiae_contig20239:1072..2381+ (Laminarionema elsbetiae ELsaHSoW15)
CAATGGCCTCGGGGCCCTAGGAATGAACTACACCGTGCCGCCTCCCAAGG GTCCACCGAGCGCACCACAGCGTTCCTCTCGAGGGGGTTGATCAACATCG ACCAAGGCAACCCCCGCGGCTTTACCCCGCTCATGTGCGCCGCCGGGGAG GGATACTCGCGCGTTGTCAAGATCCTATTGATCAGAGGGGCCAATATGTC GATAGCAGGAGATTCTGGCGTGTCTGCTCTGCACATTTGCGCACTAAAAG GACACGTCGCAGTGACGGTCGACCTGGCCAAGGCAGGTGCGGAACTGGAC GCAGAGGACGTTGAAGGCGCCACACCGCTTCATCTGGCTGCGCAGCGTGG CCACGTGGGGGTGATGGCCGTACTGATCGAGGCCGGCGCGGATGTAGATA GGCTTGCGGGGGATGGGCGTACACCGCTGTACATTGCGGCATTCGATGGA CGTCTGAACGCTGTCAAAGAACTTCTTCGTGCGAATGCGAACCCGCTGCT GGCCATGACGCCTTCGTCGAGAGCAACTTCACTCCCGCGAGCGACTTTGC TCCCGCTGGATGGGGCTGCGTGCACTGGTCGCCCTGACGTGGTACGCGAG CTGATCAAACAGGTCGGGATCAAAGGTTGTGCTGGTGCAAGCGGCGGTGT AGATGCCCTTGATGTGGCCTCGCAGGAGGAGAATGTGGACGTCATGGCCA TACTGATGGACGCTGGAGTTGTTGATACGGGAGTAGCCCTGTTCACCGCC GCGGGATCTGCCTGGGAGGCGGCCGTCAAGCTCCTGTTGCAGCAGCGGCG ACTGCGGGATCCCATCTTCAACTATGTCAATTCCTGTGACTCTTCCGATA TTACACCTTTGTTCCGTAGCGTTAGTGTAATCACTGACAGGGAGGGCGTG CCCCGCCTGATTTCTCCCAAGGTGGTGCGGTTGCTCATCGACGCAGGAGC GGACACGTCATCGGCCGTTCGCGTCATGCACCTGGGTAAATTAGTATTCA ACGACACAGTGCTGACTTTGACCAACAATTAAATTGCCTTCGCTCAAAGC AAGTGGGGGGAAACAAAAACACGACGGAGGAGCACATGTACAGGCTGCAG GCTGTGCGCCGTTTGCTGCTGCGGGTGGAAGCAGTGCATGCTGCCTCTTG GTTGTGGCTCAGGGAGCCTCTACCGGTCAGCCGTGCTGCAGACATTTGGA GCAGGAGGAAGACCGCCAAGAAACCCTCAGCGAGCGGCACGCAGCTGGTG TTGATGCTGCCGATCTTGCGGAGGAGGAGACGCGGTATACTGTTGGCGCC ACTGTTCAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig20239:1072..2381+

>mRNA_L-elsbetiae_contig20239.6088.1 ID=mRNA_L-elsbetiae_contig20239.6088.1|Name=mRNA_L-elsbetiae_contig20239.6088.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1800bp|location=Sequence derived from alignment at L-elsbetiae_contig20239:1072..2381+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGCGCCGCCGGGGAGGGATACTCGCGCGTTGTCAAGATCCTATTGAT
CAGAGGGGCCAATATGTCGATAGCAGGAGATTCTGGCGTGTCTGCTCTGC
ACATTTGCGCACTAAAAGGACACGTCGCAGTGACGGTCGACCTGGCCAAG
GCAGGTGCGGAACTGGACGCAGAGGACGTTGAAGGCGCCACACCGCTTCA
TCTGGCTGCGCAGCGTGGCCACGTGGGGGTGATGGCCGTACTGATCGAGG
CCGGCGCGGATGTAGATAGGCTTGCGGGGGATGGGCGTACACCGCTGTAC
ATTGCGGCATTCGATGGACGTCTGAACGCTGTCAAAGAACTTCTTCGTGC
GAATGCGAACCCGCTGCTGGCCATGACGCCTTCGTCGAGAGCAACTTCAC
TCCCGCGAGCGACTTTGCTCCCGCTGGATGGGGCTGCGTGCACTGGTCGC
CCTGACGTGGTACGCGAGCTGATCAAACAGGTCGGGATCAAAGGTTGTGC
TGGTGCAAGCGGCGGTGTAGATGCCCTTGATGTGGCCTCGCAGGAGGAGA
ATGTGGACGTCATGGCCATACTGATGGACGCTGGAGTTGTTGATACGGGA
GTAGCCCTGTTCACCGCCGCGGGATCTGCCTGGGAGGCGGCCGTCAAGCT
CCTGTTGCAGCAGCGGCGACTGCGGGATCCCATCTTCAACTATGTCAATT
CCTGTGACTCTTCCGATATTACACCTTTGTTCCGTAGCGTTAGTGTAATC
ACTGACAGGGAGGGCGTGCCCCGCCTGATTTCTCCCAAGGTGGTGCGGTT
GCTCATCGACGCAGGAGCGGACACGTCATCGGCCGTTCGCGTCATGCACC
TGGGTAAATTAGTATTCAACGACACAGTGCTGACTTTGACCAACAATTAA
ATGTGCGCCGCCGGGGAGGGATACTCGCGCGTTGTCAAGATCCTATTGAT
CAGAGGGGCCAATATGTCGATAGCAGGAGATTCTGGCGTGTCTGCTCTGC
ACATTTGCGCACTAAAAGGACACGTCGCAGTGACGGTCGACCTGGCCAAG
GCAGGTGCGGAACTGGACGCAGAGGACGTTGAAGGCGCCACACCGCTTCA
TCTGGCTGCGCAGCGTGGCCACGTGGGGGTGATGGCCGTACTGATCGAGG
CCGGCGCGGATGTAGATAGGCTTGCGGGGGATGGGCGTACACCGCTGTAC
ATTGCGGCATTCGATGGACGTCTGAACGCTGTCAAAGAACTTCTTCGTGC
GAATGCGAACCCGCTGCTGGCCATGACGCCTTCGTCGAGAGCAACTTCAC
TCCCGCGAGCGACTTTGCTCCCGCTGGATGGGGCTGCGTGCACTGGTCGC
CCTGACGTGGTACGCGAGCTGATCAAACAGGTCGGGATCAAAGGTTGTGC
TGGTGCAAGCGGCGGTGTAGATGCCCTTGATGTGGCCTCGCAGGAGGAGA
ATGTGGACGTCATGGCCATACTGATGGACGCTGGAGTTGTTGATACGGGA
GTAGCCCTGTTCACCGCCGCGGGATCTGCCTGGGAGGCGGCCGTCAAGCT
CCTGTTGCAGCAGCGGCGACTGCGGGATCCCATCTTCAACTATGTCAATT
CCTGTGACTCTTCCGATATTACACCTTTGTTCCGTAGCGTTAGTGTAATC
ACTGACAGGGAGGGCGTGCCCCGCCTGATTTCTCCCAAGGTGGTGCGGTT
GCTCATCGACGCAGGAGCGGACACGTCATCGGCCGTTCGCGTCATGCACC
TGGGTAAATTAGTATTCAACGACACAGTGCTGACTTTGACCAACAATTAA
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