mRNA_L-elsbetiae_contig2012.6051.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2012.6051.1
Unique NamemRNA_L-elsbetiae_contig2012.6051.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 2.420e-62
Identity = 160/344 (46.51%), Postives = 195/344 (56.69%), Query Frame = 3
Query:  258 GADLEART-SEGVTPLHLAAQAGCSEVMSVLIEXXXXXXXXXXXXXXXXXXXXXXGQLIAVRELLRARADPLLFRMLPSGETG-VPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQHVHIMIILTSAGVVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVG-YVNSRDETGETPLLRSMDFCSVGVGGVLLLPSPRVVRLLVDAGADTTSDILATSAAGVIRNWGTPLAYTNALLGLKKIR-GLDATEKQLHALEAIRRLLLRVEAVHAVSWLWPCGFPSVAKAAGDTTKIATMTPPTGTQLTSMLPILRRR--RRGGLLAPLLRYS 1271
            GADL+A    EG  PLH A              XXX                   GQ+  +RELLR  A+PLL +  P G T  VPLD AA  GH++VVRELI++ GIEGC   S G  AL +AA NQH+ IM ILT AGVVDTG AL+ AA      +VKFLL+ R +E    G+ G Y+N+RD  G TPL+     C+ G        +PR+VR+LVDAGADTTS +   +  G +    TPLA+T   L  K +  G  AT++ L  LEAI RLLLRV+AVHAVSWLWP G P + +A        T   P    L  MLPIL+RR  RR GL+A LLRYS
Sbjct:  196 GADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGG-CGVEGAYLNARDVNGYTPLV----VCTQGC----FSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRAT------ETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYS 524          
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 5.360e-60
Identity = 156/344 (45.35%), Postives = 192/344 (55.81%), Query Frame = 3
Query:  264 DLEARTSEGVTPLHLAAQAGCSEVMSVLIEXXXXXXXXXXXXXXXXXXXXXXGQLIAVRELLRARADPLLFRML-PSGETGVPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQHVHIMIILTSAGVVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVGYVNSRDETGETPLLRSMDFCSVGVGGVLLLPSPRVVRLLVDAGADTTSDILATSAAGVIRNWGTPLAYT-NALLGLKKIRGLD-ATEKQLHALEAIRRLLLRVEAVHAVSWLWPCGFPSVAKAAGDTTKIATMTPPTGTQLTSMLPILRRRRRGGL--LAPLLRYSSYP 1280
            +L +R S+G TPL+ AA                                   G + A R LL A+ADPLL  +  PSG T +PLDAAA  GH EVV ELIRQ GI+GC G+SGGV ALQ AA+ ++++IM+ILT+AGVVDTGLAL  AA +     +KFLL+Q  R    +    YVN+RD  G TPLL  +               PRVVRLLV+AGADTTS +   +  G      TPL  T N +    K+ G   A+ +QLH LEAIRRLLLRVEAVHAVSWLWP    ++ +AA   T   T      T +T  + + RRR RG    LA LLRYSS P
Sbjct:  140 NLNSRRSDGATPLYTAA---------------------------------WKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQA-RARKTMDEAAYVNTRDRGGVTPLLWGIQHYR-----------PRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAI---STAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 4.320e-56
Identity = 146/338 (43.20%), Postives = 182/338 (53.85%), Query Frame = 3
Query:  267 LEARTSEG-VTPLHLAAQAGCSEVMSVLIEXXXXXXXXXXXXXXXXXXXXXXGQLIAVRELLRARADPLLFRMLPSG-ETGVPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQHVHIMIILTSAGVVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVGYVNSRDETGETPLLRSMDFCSVGVGGVLLLPSPRVVRLLVDAGADTTSDILATSAAGVIRNWGTPLAYTNALLGLKKIRGLDATEKQLHALEAIRRLLLRVEAVHAVSWLWPCGFPSVAKAAGDTTKIATMTPPTGTQLTSMLPILRRRRRGGLLAPLLRYSS 1274
            L+A T +   TPL  AA+ GC+  ++ L++                      G ++AV  LL A+ADPLL     SG E  +PLD AA  GH EVV ELIRQ GI+GC G+SGG  AL+ AA    + IM ILT AGVVDTGLAL  AA +     +KFLL+Q +   S      Y+N+ +  G T LL  +  C            PRVV+LLV+AGADTTS +L  +  G      TPL  T  LLG +  + L   E+  + LE IRRLLLR EAVHAVSWLWP   P++  A    T   T T    T    ++   R R R GLLA LLRYSS
Sbjct:  107 LDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKS-TDRAAYMNTLNGVGLTSLLDGIQRCR-----------PRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSAKPLTMEEQ--NKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSS 430          
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 1.510e-53
Identity = 141/288 (48.96%), Postives = 176/288 (61.11%), Query Frame = 3
Query:  444 LLRARADPLLFRMLPSGETGVPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQHVHIMIILTSAG-VVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVGYVN-SRDETGETPLLRSMDFCSVGVGGVLLLPSPRVVRLLVDAGADTTSDILATSAAGVIR---NWG----TPLAYTNALLGLKKIRGLDATEKQLHALEAIRRLLLRVEAVHAVSWLWPCGFPS-VAKAAGDTTKIATMTPPTGTQLTSMLPILRRR--RRGGLLAPLLRYS 1271
            LLRA+A+PLL    P G + VPL+ AA  G+ +V RE+IRQ GI GC G SGGV AL+ AA+ +H+  M +L  AG VVDTG AL  AA+     AVKFLL++RQ +A       YVN +RD  G TP++     C+V VG   L  SP++VRLLVDAGA+TT       A GV R    W     TPLA+T  LL   ++ G  AT++QL  L+  R LL R EAVHAVSWLW  G P  +A+AAGDT K  T +    T L +M P+LRR+   RG LL  L RYS
Sbjct:  164 LLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADAD-----AYVNGTRDPYGRTPVM-----CAVDVGAGRLC-SPKIVRLLVDAGANTTR------AVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDT-KTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYS 433          
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 2.150e-52
Identity = 132/290 (45.52%), Postives = 169/290 (58.28%), Query Frame = 3
Query:  420 GQLIAVRELLRARADPLLFRM-LPSGETGVPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQHVHIMIILTSAGVVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVGYVNSRDETGETPLLRSMDFCSVGVGGVLLLPSPRVVRLLVDAGADTTSDILATSAAGVIRNWGTPLAYTNALLGLKKIRGLDATEKQLHALEAIRRLLLRVEAVHAVSWLWPCGFPSVAKAAGDTTKIATMTPPTGTQLTSMLPILRRRRR--GGLLAPLLRYSSYP 1280
            GQL A RELLRA A+PL+ R  LP   T +PLD+AA  G+  V+RELI++ GIEGC G S G  AL  A E + V  M +LT AGVVDTG AL  +A      +VK+LLQ   +   P     YVN RD  G TPLL S+  C V          PRV RLLV+AGADTT+++  T++ GV+    TPL  T  +L  KK+ G   ++++L  LE IRRLLL+VEAVHA SWLWP       +   +  ++ T T     +L  +LPILRRR R  G +   L R+   P
Sbjct:  145 GQLEATRELLRANANPLITRAPLP---TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGA---YVNVRDRNGTTPLLSSIYVCGVDEQSSF----PRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424          
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 4.460e-50
Identity = 130/278 (46.76%), Postives = 166/278 (59.71%), Query Frame = 3
Query:  450 RARADPLLFRMLPSGETGVPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQHVHIMIILTSAGVVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVGYVNS-RDETGETPLLRSMDFCSVGVGGVLLLPSPRVVRLLVDAGADTTSDILATSAAGVIRNWGTPLAYTNALLGLKKIRGLDATEKQLHALEAIRRLLLRVEAVHAVSWLWPCGFPSVAKAAGDTTKIAT-MTPPTGTQLTSMLPILRRRRRGG--LLAPLLRYS 1271
            RA+A+PLL R+  + +  +PLD AA  G   VV EL+++FGI GC G +GGV ALQ AA   H+ +M+ LT+AGVVDTG+AL  A  +   + VKFLLQQ+    +P     YV+  RD  G TPL+     C++ VG +    SP+VVRLLVDAGADTTS +  T   G +    TPL+     L +K        ++ L  LE IRRLLLRVEAVHA SWLW  G P V   AG T    T  +  T  QL ++LPILRRR RG   + A L RY+
Sbjct:  168 RAKANPLLTRVNLAWQH-LPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQN--GTPSEKSAYVSRPRDPCGRTPLI-----CNIDVG-LNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYA 436          
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 1.020e-49
Identity = 145/348 (41.67%), Postives = 177/348 (50.86%), Query Frame = 3
Query:  249 VEPGADLEARTSEGV-TPLHLAAQAGCSEVMSVLIEXXXXXXXXXXXXXXXXXXXXXXGQLIAVRELLRARADPLLFRMLPSGE-TGVPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQHVHIMIILTSAGVVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVGYVNSRDETGETPLLRSMDFCSV-GVGGVLLLPSPRVVRLLVDAGADTTSDILATSAAGVIRNWGTPLAYTNALLGLKKIRGLDATEKQLHALEAIRRLLLRVEAVHAVSWLWPCGFPSVAKAAGDTTKIATMTPPTGTQLT-SMLPILRRRRRGGLLAPLLRYSSYP 1280
            VE GA LE  T + + TPL +AA  GC+  M+ L+E                      G + AVR LL A+ DPLL   L + E   +PLD AAG GH EVV ELIRQ GI GC G+SGGV ALQ AA N+H+ ++ +LT+AGVVDTGLA      WR G            E S    VG     +  G T +      C    +        PRVVRLLV+AGADTTS +      G      TP+  T  +L L  +     TE+QL+ALEAI RLLLRVEA+HAVSWLW     +   +    T   T     GT L  +M    R + R   LA LLRYSS P
Sbjct:    3 VEAGAPLEVATKQQLCTPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLAR-GRRIWRRGPL----------EVS----VGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTVPIDGLPGTDNI--TPMGLT--MLLLHDLGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGTDRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSKP 331          
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 2.780e-42
Identity = 139/342 (40.64%), Postives = 173/342 (50.58%), Query Frame = 3
Query:  258 GADLEARTS-EGVTPLHLAAQAGCSEVMSVLIEXXXXXXXXXXXXXXXXXXXXXXGQLIAVRELLRARADPLLFRMLPSGETGVPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQHVHIMIILTSAGVVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVGYVN-SRDETGETPLLRSMDFCSVGVGGVLLLPSPRVVRLLVDAGADTTSDILATSAAGVIRNWGTPLAYTNALLGLKKIRGLDATEKQLHALEAIRRLLLRVEAVHAVSWLWPCGFPSVAKAAGDTTKIATMTPPTGTQLTSMLPILR-RRRRGGLLAPLLRYSS 1274
            GADLEA TS  G  PLHLAA  G          XXX           XXXXXXXX           A+ADPLL R+  S +  VPLDAAAG G S VVRE + Q GI+GC G S G  AL  AA+ Q V  M +L +AGVVDTG+AL  A +     ++KFLL+Q+Q + +P G   YV+ +RD  G TPLL     CS+   G++                                         +  LG  ++ G D TE+Q H L A+ RLLLRVEAVHA SWLW    P +A  A + TK   +TP   +  + M P+L    RR  LL+ +LRYSS
Sbjct:  103 GADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTG--AYVDEARDPFGRTPLL-----CSIEDEGLV-----------------------------------------DHYLGENRVIGRDITEEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTA-EVTKRTKVTP---SPRSRMFPVLGLSTRRNALLSAVLRYSS 392          
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 4.480e-42
Identity = 138/264 (52.27%), Postives = 160/264 (60.61%), Query Frame = 3
Query:  306 LAAQAGCSEVMSVLIEXXXXXXXXXXXXXXXXXXXXXXGQLIAVRELLRARADPLLFRMLPSGETGVPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQHVHIMIILTSAGVVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVGYVN-SRDETGETPLLRSMDFCSVGVGGVLLLPSPRVVRLLVDAGADTTSDILATSAAGVIRNWGTPLAYTNALLGLKKIRGLDATEKQLHALEAIRRLLLRVEA 1094
            LAA AGC EV  V   XXXXXXXXXXXXXXXXXXXXXX          RA+A+PLL +  PSG T VPLD AA  G +EVVRELI+Q  I+GC GASGGV AL+ AA +Q+V +M +L  AGV+DTG AL +AA       VK LLQQR   ++   L  YVN + D  G TPLL     CS+  G      SPRVVRLLVDAGADT S +     AG I    TP+ +    L      G  A EK +H L AI RL  +VEA
Sbjct:  123 LAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLL-----CSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEA 381          
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Match: A0A6H5JWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ8_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 1.210e-41
Identity = 135/351 (38.46%), Postives = 178/351 (50.71%), Query Frame = 3
Query:  249 VEPGADLEARTSE-GVTPLHLAAQAGCSEVMSVLIEXXXXXXXXXXXXXXXXXXXXXXGQLIAVRELLRARADPLLFRMLPSGETGVPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQHVHIMIILTSAGVVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVGYVNSRDETGETPLLRSMDFCSVGVGGVLLLPSPRVVRLLVDAGADTTSDILATSAAGVIRNWGTPLAYTNALLGLKKIRGLDATEKQLHALEAIRRLLLRVEAVHAVSWLWPCGFPSVAKAAGDTTKIATMTPPTGTQLTSMLPILR-RRRRGGLLAPLLRYSSYP*LGSG 1295
            V  GA+LEA TS  G  P HLAA  G + V+  L +                      G + AVR  LRA+A+ LL R+  S ++ VPLDAAAG G S VVREL+ Q GI+GC G S G  AL  AA+ Q V  M +L +AG+VDTG+AL  A +     ++KFLL+Q   + +P          DE G         +C            PR+VR++VDA ADTTS      A  V++    P+  T   LGL             H L A+ RLLLRVEA+HA SWLW    P +A  A + TK   + PP  ++   MLP+L    RR  LL+ +LR++    +GSG
Sbjct:   49 VNAGAELEAATSSNGSRPRHLAADIGHAAVIKALRQAPISTAA---------------GHVEAVRAFLRAKANSLLIRLNASRDSFVPLDAAAGKGRSLVVRELLGQLGIDGCGGPSRGPHALYHAAKEQFVDTMAVLATAGMVDTGIALIGAIKENLEGSIKFLLRQSSCKGNPP----VPTIEDEGGR--------WCF-----------PRIVRMIVDAVADTTS------AVRVLKLGLLPVKETP--LGLA------------HKLSAVHRLLLRVEALHAASWLWVSDAPDIAHTA-EVTKRTKVIPPARSR---MLPVLGLSTRRNALLSAVLRWAGR--IGSG 335          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2012.6051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT11_ECTSI2.420e-6246.51EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KJA9_9PHAE5.360e-6045.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQV0_9PHAE4.320e-5643.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1H7_ECTSI1.510e-5348.96EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D8LJF9_ECTSI2.150e-5245.52EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVK3_ECTSI4.460e-5046.76EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FXY7_ECTSI1.020e-4941.67EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1I8_ECTSI2.780e-4240.64EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JL33_9PHAE4.480e-4252.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWZ8_9PHAE1.210e-4138.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2012contigL-elsbetiae_contig2012:5704..8114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score242.7
Seed ortholog evalue2.4e-61
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1960
Cds size948
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2012.6051.1prot_L-elsbetiae_contig2012.6051.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2012 6039..7437 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815833.1479483-UTR-L-elsbetiae_contig2012:5703..60381622815833.1479483-UTR-L-elsbetiae_contig2012:5703..6038Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2012 5704..6038 +
1691683133.1787572-UTR-L-elsbetiae_contig2012:5703..60381691683133.1787572-UTR-L-elsbetiae_contig2012:5703..6038Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2012 5704..6038 +
1622815833.184973-UTR-L-elsbetiae_contig2012:7437..81141622815833.184973-UTR-L-elsbetiae_contig2012:7437..8114Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2012 7438..8114 +
1691683133.2043295-UTR-L-elsbetiae_contig2012:7437..81141691683133.2043295-UTR-L-elsbetiae_contig2012:7437..8114Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2012 7438..8114 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815833.1586888-CDS-L-elsbetiae_contig2012:6038..69671622815833.1586888-CDS-L-elsbetiae_contig2012:6038..6967Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2012 6039..6967 +
1691683133.1888337-CDS-L-elsbetiae_contig2012:6038..69671691683133.1888337-CDS-L-elsbetiae_contig2012:6038..6967Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2012 6039..6967 +
1622815833.1714768-CDS-L-elsbetiae_contig2012:7418..74371622815833.1714768-CDS-L-elsbetiae_contig2012:7418..7437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2012 7419..7437 +
1691683133.1965096-CDS-L-elsbetiae_contig2012:7418..74371691683133.1965096-CDS-L-elsbetiae_contig2012:7418..7437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2012 7419..7437 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2012.6051.1

>prot_L-elsbetiae_contig2012.6051.1 ID=prot_L-elsbetiae_contig2012.6051.1|Name=mRNA_L-elsbetiae_contig2012.6051.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp
MSVLIEAGANVDNRTADGGTPLFVAAHQGQLIAVRELLRARADPLLFRML
PSGETGVPLDAAAGAGHSEVVRELIRQFGIEGCAGASGGVAALQWAAENQ
HVHIMIILTSAGVVDTGLALFSAAQWRSGEAVKFLLQQRQREASPIGLVG
YVNSRDETGETPLLRSMDFCSVGVGGVLLLPSPRVVRLLVDAGADTTSDI
LATSAAGVIRNWGTPLAYTNALLGLKKIRGLDATEKQLHALEAIRRLLLR
VEAVHAVSWLWPCGFPSVAKAAGDTTKIATMTPPTGTQLTSMLPILRRRR
RGGLLAPLLRYSSYP*
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mRNA from alignment at L-elsbetiae_contig2012:5704..8114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2012.6051.1 ID=mRNA_L-elsbetiae_contig2012.6051.1|Name=mRNA_L-elsbetiae_contig2012.6051.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2411bp|location=Sequence derived from alignment at L-elsbetiae_contig2012:5704..8114+ (Laminarionema elsbetiae ELsaHSoW15)
GTTAATGTGGCCGCCTTCCGTGGTTCCACCGAGCGCACGATAGCCCTGCT CTCGAGAGGTTCGATCAACATCGACCACGGCGATCCCGAAGGCCGTACCC CGCTCATGGTCGCCGCCCAGGAGGGCCACTCGCACGTTGCCAGGATCCTG CCGAGCAGGAGAGCCAACGTGGCGATAGCAGACGATGACGATTTTTCTGT TCTGCACTTTTCCGCTCAACACGGACACCTCGCCGTGACCATCGACCTGT TGAACCCGGCGCAGACCTGGAAGCGAGGACCTCGGAGGGTGTCACACCGC TTCATCTGGCTGCGCAGGCCGGGTGCTCAGAGGTGATGTCAGTACTGATC GAGGCAGGCGCAAATGTCGACAACCGTACTGCGGATGGAGGTACGCCACT GTTCGTGGCGGCCCATCAAGGACAGTTGATTGCAGTCAGGGAGCTCCTTC GTGCGAGAGCGGATCCTTTGCTATTCAGAATGTTGCCCTCCGGGGAAACT GGCGTCCCATTGGACGCGGCGGCGGGAGCTGGTCACTCTGAGGTTGTACG CGAGCTGATCCGGCAGTTCGGGATCGAAGGTTGCGCTGGTGCAAGCGGCG GTGTCGCCGCCCTGCAATGGGCCGCAGAGAATCAGCATGTGCACATCATG ATCATTCTGACGAGCGCCGGAGTGGTGGATACGGGACTAGCACTGTTTTC CGCAGCGCAGTGGCGCAGTGGGGAGGCAGTGAAGTTCCTGTTGCAGCAGC GGCAGCGGGAGGCGTCCCCGATCGGCTTAGTCGGATACGTCAACTCCCGC GATGAAACCGGCGAAACCCCCTTGTTGCGTAGCATGGACTTTTGTAGCGT CGGAGTCGGGGGCGTGCTCTTGCTACCTTCACCGAGGGTGGTGCGGTTGC TTGTGGACGCCGGAGCAGATACAACGTCGGACATTCTAGCCACGAGCGCA GCAGGCGTTATTCGCAACTGGGGCACGCCGCTGGCTTACACCAACGCACT CCTCGGCCTCAAGAAAATACGAGGATTAGACGCGACAGAGAAGCAGCTGC ATGCGCTGGAGGCAATCCGCCGCTTGCTTCTGCGTGTAGAGGCAGTGCAT GCAGTTTCTTGGCTGTGGCCTTGCGGTTTCCCGTCTGTCGCCAAGGCCGC AGGGGATACAACCAAGATCGCCACGATGACTCCGCCTACTGGCACGCAGC TAACATCGATGCTGCCGATCCTGAGACGCAGAAGACGTGGTGGACTTTTG GCGCCTCTGCTCAGGTGGGTAGAATGATACTGTTGTGTTTTCATATCATC TGTTATGTAATCTTTATGGAGATGTGATATCAATTCAGGTGCAGGGAAAA TCTTGCTTTTGATTCAAATCTGAAACTTCCTTTTTGATGACTTCGGTCAG CTGCACTCTCGTGCTGGCGTGTGCGTTGAGTTGACTCTTGCCCACACATG TGTTTTCTGCGCCGCGCAGCCTGAACGTCACCATGCCTCCTATCAACCTC GTTCCAGAGCTTCACATGCATCCTTTGTGGTCCGCCGAAAAATGTCAAGT GACGGGCCGATTATTTCGGCTTCTGGTCGATCGTGCAAATGGTATAAAGT TTGGTAGACGCACTTTTTTCATCCACTTGCACCCTGGCGTGACCAGGGGT CCTTTCCTCTCCCCTCTGGCGTGTTTTGCCAACGTTTTACTGCACATACA CTTGCTGAAACTCAGGTATTCAAGCTATCCGTAACTGGGGAGCGGCTCAC GTGATGTCTGTAGCGGCGTTTTGGTCACCGCTTTGTCTCTACCGGCAGAT GGAAAGGCGCTTACGGCATTTTATCTACATGATGTACCGTACGACTTTCT GGTGGACCATGCCTGTTTTTTTTTATTGTGTACGGGATCTAATTATTTTG TGACGGCAGAGACGAGTGTACAATATACGATACCGTACGTACAAATGTTG TTCCAAGCACCAACTTGGAGTCAAGGTCTTTCAGTAAGGCGGCAACAAGC TGATGCGATCGTGGCTAAATCTTGTCAAACAGCGCGTGTTTTTTATGTGG TCATCTCTGGCGTGTATTTTGGTGGCTTCCCCCGACATGCGCAGAGGAAG CCTAGTTGCCTTCCCCTTGGCGTGTGGATTCGTGAGCTAAGCAAAAAGCT GGTCCAATGTGGAGTACTGTTGTCAGCGAAAGAGGTGGGCATTGTCGACG CGATTGTCGACTTTTAGGGTCGATCTTAGAGAGAACGTAACTTCTGCGCA AGCGGTAGCGGCACGGAGGTGGTGGTGTTTTTTGGGCACAGGTTGCTTTT TCTGAAAGGAAATCGGGTGAAGCGTGACCCGACTCGAATTGATTTTGAGC TTTCATGCCAACAGCAGCGGTTTGTGCTGCCGCATTGTCGATGGACAAGG GATGCTTCTTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig2012:5704..8114+

>mRNA_L-elsbetiae_contig2012.6051.1 ID=mRNA_L-elsbetiae_contig2012.6051.1|Name=mRNA_L-elsbetiae_contig2012.6051.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1896bp|location=Sequence derived from alignment at L-elsbetiae_contig2012:5704..8114+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAGTACTGATCGAGGCAGGCGCAAATGTCGACAACCGTACTGCGGA
TGGAGGTACGCCACTGTTCGTGGCGGCCCATCAAGGACAGTTGATTGCAG
TCAGGGAGCTCCTTCGTGCGAGAGCGGATCCTTTGCTATTCAGAATGTTG
CCCTCCGGGGAAACTGGCGTCCCATTGGACGCGGCGGCGGGAGCTGGTCA
CTCTGAGGTTGTACGCGAGCTGATCCGGCAGTTCGGGATCGAAGGTTGCG
CTGGTGCAAGCGGCGGTGTCGCCGCCCTGCAATGGGCCGCAGAGAATCAG
CATGTGCACATCATGATCATTCTGACGAGCGCCGGAGTGGTGGATACGGG
ACTAGCACTGTTTTCCGCAGCGCAGTGGCGCAGTGGGGAGGCAGTGAAGT
TCCTGTTGCAGCAGCGGCAGCGGGAGGCGTCCCCGATCGGCTTAGTCGGA
TACGTCAACTCCCGCGATGAAACCGGCGAAACCCCCTTGTTGCGTAGCAT
GGACTTTTGTAGCGTCGGAGTCGGGGGCGTGCTCTTGCTACCTTCACCGA
GGGTGGTGCGGTTGCTTGTGGACGCCGGAGCAGATACAACGTCGGACATT
CTAGCCACGAGCGCAGCAGGCGTTATTCGCAACTGGGGCACGCCGCTGGC
TTACACCAACGCACTCCTCGGCCTCAAGAAAATACGAGGATTAGACGCGA
CAGAGAAGCAGCTGCATGCGCTGGAGGCAATCCGCCGCTTGCTTCTGCGT
GTAGAGGCAGTGCATGCAGTTTCTTGGCTGTGGCCTTGCGGTTTCCCGTC
TGTCGCCAAGGCCGCAGGGGATACAACCAAGATCGCCACGATGACTCCGC
CTACTGGCACGCAGCTAACATCGATGCTGCCGATCCTGAGACGCAGAAGA
CGTGGTGGACTTTTGGCGCCTCTGCTCAGATGTCAGTACTGATCGAGGCA
GGCGCAAATGTCGACAACCGTACTGCGGATGGAGGTACGCCACTGTTCGT
GGCGGCCCATCAAGGACAGTTGATTGCAGTCAGGGAGCTCCTTCGTGCGA
GAGCGGATCCTTTGCTATTCAGAATGTTGCCCTCCGGGGAAACTGGCGTC
CCATTGGACGCGGCGGCGGGAGCTGGTCACTCTGAGGTTGTACGCGAGCT
GATCCGGCAGTTCGGGATCGAAGGTTGCGCTGGTGCAAGCGGCGGTGTCG
CCGCCCTGCAATGGGCCGCAGAGAATCAGCATGTGCACATCATGATCATT
CTGACGAGCGCCGGAGTGGTGGATACGGGACTAGCACTGTTTTCCGCAGC
GCAGTGGCGCAGTGGGGAGGCAGTGAAGTTCCTGTTGCAGCAGCGGCAGC
GGGAGGCGTCCCCGATCGGCTTAGTCGGATACGTCAACTCCCGCGATGAA
ACCGGCGAAACCCCCTTGTTGCGTAGCATGGACTTTTGTAGCGTCGGAGT
CGGGGGCGTGCTCTTGCTACCTTCACCGAGGGTGGTGCGGTTGCTTGTGG
ACGCCGGAGCAGATACAACGTCGGACATTCTAGCCACGAGCGCAGCAGGC
GTTATTCGCAACTGGGGCACGCCGCTGGCTTACACCAACGCACTCCTCGG
CCTCAAGAAAATACGAGGATTAGACGCGACAGAGAAGCAGCTGCATGCGC
TGGAGGCAATCCGCCGCTTGCTTCTGCGTGTAGAGGCAGTGCATGCAGTT
TCTTGGCTGTGGCCTTGCGGTTTCCCGTCTGTCGCCAAGGCCGCAGGGGA
TACAACCAAGATCGCCACGATGACTCCGCCTACTGGCACGCAGCTAACAT
CGATGCTGCCGATCCTGAGACGCAGAAGACGTGGTGGACTTTTGGCGCCT
CTGCTCAGGTATTCAAGCTATCCGTAAGTATTCAAGCTATCCGTAA
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