mRNA_L-elsbetiae_contig199.5959.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig199.5959.1
Unique NamemRNA_L-elsbetiae_contig199.5959.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Match: D7G854_ECTSI (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G854_ECTSI)

HSP 1 Score: 937 bits (2423), Expect = 0.000e+0
Identity = 476/654 (72.78%), Postives = 526/654 (80.43%), Query Frame = 1
Query:  199 RTTALGTLRPGCKTATSRSRRAATTAATGRPAGHPTVWNAVSRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDINYALGITDVDDKIIQRARERGLRDWPDIAEMAADFERQFMDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEADGGIYFDVEGMGSGYGKLGVQASSSTTPDEEGGSELRGKKSHKDFALWKKAKPDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAXXXXXXXXXXXXXXXXXAVTKKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAGRGQRWGQKEKWLAEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELAEGDLGPVVSAANFTAETLSLLGVGSSVGGTVAAAATATGGGADTRPNSGGWRGDGWGLVGGDELPPASEFVAAMVEFRRLVRKHVLERKLTNKLGPAKLMKRDLLQLVDHTRDETLPSLGIHVHDEPNNECTWMVLPPERRRGRREQVDEQPVAELDTGAGAGEKDVAEPGDATWADGDKVELPV 2160
            R TA  T    C ++ + S  +ATT    R    P VWN V+ CL+P PDPSTG+LKWYSCGPTVYDSAHLGHARTYVSLDVIRR+LTDYFRFD+ YALGITDVDDKII RARE GLR+WP++AEMAA+FERQF++DMS+LGVRPPDA+TRVTDH+P+I+ YIQRI+++GM YEA GG+YFDVEGMG  YGKLGV+ASSSTTP+EEGGSELRGK+SHKDFALWK AK DEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGG+DLKFPHHTNEIAQCEAH +CGG+ ATA                    +KPWVRHWIHTGHLNIEGLKMSKSLKNFVT+R+YL+GHSAG+EAAAEDFRMFCLMHKYSSNVTFS DRMEEASVVR R QRFLALAD TI AARK+RPA    RWG+KEKWL EETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKEL +GDLGPVVSA NF AETL+LLGVG S  G     A A GGG       GG RG   GLVG D LPPA E V AMVEFRR+ RKHVLER L       KLMKRDLLQL+DHTRDETLPSLG+HVHDEP+N+CTWMVLPP++R+ RR   D+            G K    PGDA WADGD+ E P+
Sbjct:   15 RPTATST----CGSSRNSSSASATTPTAARAPVQPAVWNTVNGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGLREWPEVAEMAAEFERQFLEDMSDLGVRPPDALTRVTDHIPDIVAYIQRILENGMGYEAAGGVYFDVEGMGGAYGKLGVKASSSTTPEEEGGSELRGKRSHKDFALWKTAKADEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGVDLKFPHHTNEIAQCEAH-ACGGVAATAAATGDGGVGGE---------RKPWVRHWIHTGHLNIEGLKMSKSLKNFVTIREYLEGHSAGQEAAAEDFRMFCLMHKYSSNVTFSEDRMEEASVVRGRLQRFLALADVTIGAARKNRPADTAVRWGKKEKWLVEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELTQGDLGPVVSARNFAAETLALLGVGESSTG-----AAAAGGGLGEMKGGGGERG---GLVGNDGLPPAREVVDAMVEFRRMARKHVLERNLKKNPVSGKLMKRDLLQLIDHTRDETLPSLGVHVHDEPDNQCTWMVLPPDQRKSRRRSEDQXXXXXXXXXGNGGVKGATLPGDAMWADGDEEEPPL 646          
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Match: A0A836CJU0_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU0_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 2.330e-142
Identity = 260/598 (43.48%), Postives = 339/598 (56.69%), Query Frame = 1
Query:  301 PTVWNAVSRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDINYALGITDVDDKIIQRARERGLR--DWPDIAEMAADFERQFMDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEADG---GIYFDVEGMGSGYGKLG------VQASSSTTPDEEGGSELRGKKSHKDFALWKKAKPDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCG------------GILATAXXXXXXXXXXXXXXXXXAVTKKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAGRGQRWGQKEKWLAEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELAEGDLG-PVVSAANFTAETLSLLGVGSSVGGTVAAAATATGGGADTRPNSGGWRGDGWGLVGGDELPPASEFVAAMVEFRRLVRKHVLERKLTNKLGPA-KLMKRDLLQLVDHTRDETLPSLGIHVHDEPNNECTWMVLPP 2019
            P +  +++  L+  P PS G LKWY+CGPTVYD+AHLGHARTYVSLDV+RR+LTD+F + I YA+G+TDVDDKII RARE G    DW   A +A  +E  FM+DM  LGV+ PDAV RVT+H+  I  Y++R++  G AY+ +G   G+YF V  +G+GYGKLG      V AS+   P          K+   DFALWK AK  EPSW+SPFGRGRPGWHIECSAMTH+LFG +LDVH+GGIDLKFPHHTNEIAQC+AH S G            G  A                         W RHW+HTGH++IEGLKMSKSLKNF+TV++Y++ H  G   A++DFR+FCLMH+Y++ VTFS  ++ EA  VRARFQRF ++A      A     A   +RWG +E  L  + + C ++V  AL  D DTP A+R L  L A    +        +  PV+S A +    LS +G+  ++GG         GGG D     G                     +  ++EFR  +R   L         PA   ++  +L L D  R+  LP  G+ + D  +    W    P
Sbjct:  121 PRLHTSLTGDLEQLPPPSRGPLKWYNCGPTVYDAAHLGHARTYVSLDVLRRLLTDHFGYRILYAMGVTDVDDKIIARAREGGATGADWGPYASLARRWEASFMEDMDTLGVQRPDAVLRVTEHMDAIHDYVERLLHLGAAYKVEGPQGGVYFSVTSLGAGYGKLGNSGTVEVDASAPAVPASSAAPTESAKRDPADFALWKAAKEGEPSWDSPFGRGRPGWHIECSAMTHALFGSDLDVHTGGIDLKFPHHTNEIAQCDAHASRGLCCAPPPSPPHTGTAAEPPNTRGIIGAPNPDARSGGQQGGEWCRHWLHTGHVHIEGLKMSKSLKNFITVKEYIEAHGGGAVQASQDFRIFCLMHRYTAPVTFSYTKIAEAGAVRARFQRFFSMA------AHVGANAAALRRWGAEEADLHAKLADCTQQVHGALGCDADTPAALRLLQELSAAACKYADVRGASAVPEPVLSCARYVERVLSAMGL--ALGG--------QGGGGDAERLEG--------------------VMNCVIEFRSELRNRALAE------APAGNALRGGVLSLCDDVRNRGLPRAGVVLEDTKDGGARWFKADP 676          
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Match: A0A5D6Y496_9STRA (Cysteine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y496_9STRA)

HSP 1 Score: 380 bits (977), Expect = 1.410e-118
Identity = 236/588 (40.14%), Postives = 325/588 (55.27%), Query Frame = 1
Query:  307 VWNAVSRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDINYALGITDVDDKIIQRARERGLRDWPDIAEMAADFERQFMDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEA-DG-GIYFDVEGMGSGYGKL-------GVQASSSTTPDEEGGSELRG----KKSHKDFALWKKAK-PDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAXXXXXXXXXXXXXXXXXAVTKKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAGRGQRWGQKEKWLAEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELAEGDLGPVVSAANFTAETLSLLGV--------------GSSVGGTVAAAA-TATGGGADTRPNSGGWRGDGWGLVGGDELPPASEFVA-AMVEFRRLVRKHVLERKLTNKLGPAKLMKRDLLQLVDHTRDETLPSLGIHVHD 1980
            V+N++   L+P  D S+  LKWY+CGPTVYD AHLGHAR YVS DV+RR+L   F F +   +G+TDVDDKIIQRA+ERG+      A +A D ER F  DM+ L V+PP A+TRV++H+ +I+ Y+QRI  +G AYEA DG G+YF    +G  YGKL       G  ++ ++  +E GG +       K+  +DFALWK AK PDEP+W+SP+GRGRPGWHIECSAMTH + G  LDVH+GGIDLKFPHH NEIAQCEAH  C  + A +                 A     W +H++H GHL I+GLKMSKSLKNF++++D+L  HSA      + FR+FCL  KY SN+ FS DR+ +A  +  R + F     A   +   D      +R  + +  L +     +  V  AL +DFDTP A+  L  L +  + +L    +G    +++ +++  E L L G+               +S GG   +++ T+    A   P S              EL    E +  ++V FR  VR+  L         P      ++L L D  R+  LP LG+ V D
Sbjct:   36 VFNSLRGALEPLDD-SSKQLKWYACGPTVYDRAHLGHARAYVSQDVLRRVLERRFGFHVRLVMGVTDVDDKIIQRAKERGVG----FAALARDEERAFFRDMAALNVQPPTAITRVSEHMSDIVAYVQRIQANGFAYEAPDGSGVYFHTRALGDAYGKLDPRRSTSGSNSADASQSEEHGGGDSEAAAGVKRDPRDFALWKTAKAPDEPAWDSPWGRGRPGWHIECSAMTHYVLGAKLDVHTGGIDLKFPHHNNEIAQCEAHSCCSPLPAGSA----------------AGNDDDWCKHFVHFGHLYIQGLKMSKSLKNFISIQDFLATHSA------DHFRLFCLQFKYRSNLHFSEDRVRDAVAIADRVKSFFRSVQAYGASGDDDDDVRASKRCERADLALLDALFDAKAGVDAALRNDFDTPHALSLLLELVSRSNEYLLGRPDGPSEVLLAVSSYVLEVLDLFGLEGLRDEFAHVPKLLAASAGGAQGSSSRTSVAREARPTPES-------------SELGANGEAILRSLVRFRAAVRERALR-------DPTAAHNAEILALCDAVRNNELPPLGVSVED 576          
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Match: A0A1W0AC21_9STRA (Cysteine--tRNA ligase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC21_9STRA)

HSP 1 Score: 375 bits (963), Expect = 3.470e-113
Identity = 239/589 (40.58%), Postives = 326/589 (55.35%), Query Frame = 1
Query:  313 NAVSRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDINYALGITDVDDKIIQRARERGLRDWPDIAEMAADFERQFMDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEADGGIYFDVEGMGSGYGKLGVQASSSTTPD--EEG-GSELRGKKSHKDFALWKKAKP-DEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEA--HGSCGGILATAXXXXXXXXXXXXXXXXXAVTKKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAGRGQRWGQKEKWLAEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELAEGDLGPVVSAANFTAETLSLLGVGSSVGGTVAAAATATGGGADTRPNSGGWRGDGWGLVGGDELPPASEFVAAMVEFRRLVRKHVLERKLTNKLGPAKLMKRDLLQLVDHTRDETLPSLGIHVHDEPNNECTWMVLP---PERRRGRREQVD 2052
            N++S  LDP P  S+  LKWY CGPTVYDSAHLGHARTYVS D++RRILT+YFR DIN  +G+TDVDDKII  A+    R    + E+A   E  F+ D++ L V    ++TRV++H+PEII YI+ +  +G AY    G+YFD   +GS YGKL   A++    +  EEG GSE   K++ +DFALWK++K  DEP WESPFGRGRPGWHIECSAMTH + G ++DVHSGGIDL FPHH NE+AQC+   H + G +                           W +H+IH GHL I+GLKMSKSLKNF+++ ++L   SA  +A    FR+FCL +KY++NV FS DRM +A+V+  RF  F        +A    R      R    +  +       + ++  AL +DFDTP  +  L +L +L++  +K +    +  V   A F  E   LLG+  S+ G  + +  A+     T P                +L  A+  + A    R  VR+  L    TN   P     + +LQL D  RD+TLP +GI + D  + +  W + P   PE        VD
Sbjct:   33 NSLSGTLDPLPQ-SSEPLKWYVCGPTVYDSAHLGHARTYVSQDILRRILTNYFRQDINMVMGMTDVDDKIIATAQ----RLKKSMTEVAGAHEDAFLKDLAALNVLRASSITRVSEHIPEIIQYIETLKQNGFAYATSDGMYFDTVALGSEYGKLAPNAATIEDNEVVEEGIGSE---KRNARDFALWKRSKTEDEPGWESPFGRGRPGWHIECSAMTHHVLGGSIDVHSGGIDLCFPHHNNEVAQCDGYHHKTPGHV---------------------------WCKHFIHFGHLYIKGLKMSKSLKNFISIEEFLKEPSASSDA----FRLFCLQYKYNTNVHFSLDRMRDANVLLQRFVSFFQTVLTMTKAGNTSR------RLESADDIILVSLYQTKVKIDQALRNDFDTPEVLLQLTNLMSLVNREIK-VRHIPIEAVCQVATFVLEMCQLLGLKDSISGFASISLAAS-----TAPEQ------------ASDLQNATAILDAFTALRAQVRQVAL----TNTKDP---QFQSILQLCDRIRDQTLPPMGIQIDDVSSGQSHWKLQPYQKPETLSNNSSNVD 551          
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Match: A0A8K1CC06_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CC06_PYTOL)

HSP 1 Score: 364 bits (935), Expect = 1.110e-112
Identity = 244/630 (38.73%), Postives = 335/630 (53.17%), Query Frame = 1
Query:  259 RAATTAATGRPAGHPTVWNAVSRCLDPFPDPST---GVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDINYALGITDVDDKIIQRARERGLRDWPDIAEMAADFERQFMDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEA-DG-GIYFDVEGMGSGYGKLGVQASSSTTPDEEGGSELR-------GKKSHKDFALWKKAKP-DEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAXXXXXXXXXXXXXXXXXAVTKKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAGRGQRWGQKEKWLAEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELAEGDLGPVV-SAANFTAETLSLLGVGSSVG--------GTVAAAATATGGGADTRPNSGGWRGDGWGLVGGDELPPASEFVAAMVEFRRLVRKHVLERKLTNKLGPAKLMKRDLLQLVDHTRDETLPSLGIHVHDEPNNECTWMVLPPERRRG---RREQVDEQPVAEL 2073
            RA +++ T   AG    WN++S   +P P  ++    VLKWY+CGPTVYD AHLGHAR YVS D++RR+L   F+  +   +G+TDVDDKII+RA ERG+R      E+A + ER+F  DM +L V PP+A+TRV++H+ EII YIQ+I  +G AY A DG G+YF+ + +G  YGKL     + T   +E   +          K   +DFALWK  K  +EPSW SP+G GRPGWHIECSAMTH + G  LDVHSGGIDLKFPHH NEIAQCEAH +C  +                           W RH++H GHL I GLKMSKSLKNF++++++L  HSA      + FR+FCL +KY  N+ +S DR+ +A VV  R + FL   +     +++       +R   ++  +       +     AL DDFDTP A+  +  L A  + +L +  E     V+ S A F  + L + G+   +         GT  AA       A +              V  D L      + A+V+FR  VR   LE        P       +LQL D  RD++LP LG+ + D    E  + VL  E R+     R+ VD +  A+L
Sbjct:   23 RAFSSSITQTSAGDVLAWNSLSGRQEPLPRATSVTPHVLKWYACGPTVYDRAHLGHARAYVSQDILRRVLEKRFQHHVFLVMGVTDVDDKIIKRANERGMR----FDELAREEEREFFSDMEQLHVLPPNAITRVSEHMDEIIAYIQQIEQNGFAYAATDGSGVYFNTQRLGDAYGKLDPMRQTKTAGHQEYEQQTEFEDTDGFHKHDRRDFALWKATKDANEPSWPSPWGPGRPGWHIECSAMTHRVLGDRLDVHSGGIDLKFPHHNNEIAQCEAH-NCSHL-----------------------HDAEWCRHFVHFGHLYIRGLKMSKSLKNFISIKEFLATHSA------DHFRLFCLQYKYRVNIHYSEDRIRDAVVVADRLRNFLR--NLHTYTSQRHTVHDVEKRCEAQDLHMLTTLFDAKVAFDAALRDDFDTPAALHGVLELIARANAYLLQHRESAPTEVLASVAAFVLDVLDVFGLEGLLKEFAHLRFLGTANAALKTETSSATSE-------------VSADAL------LNALVQFRAAVRAQALE-------DPRNPAHAQILQLCDALRDQSLPPLGVQIEDLAPGEAVFKVLTTEERQAWQQERDAVDAEKQAKL 590          
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Match: K3W8N7_GLOUD (Cysteine--tRNA ligase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8N7_GLOUD)

HSP 1 Score: 360 bits (923), Expect = 2.590e-111
Identity = 226/569 (39.72%), Postives = 319/569 (56.06%), Query Frame = 1
Query:  361 VLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDINYALGITDVDDKIIQRARERGLRDWPDIAEMAADFERQFMDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEA-DG-GIYFDVEGMGSGYGKLG------VQAS---SSTTPDEEGGSELRGKKSHKDFALWKKAK-PDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAXXXXXXXXXXXXXXXXXAVTKKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRP-AGRGQRWGQKEKWLAEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELAEGDLGPVVSAANFTAETLSLLG----------------VGSSVGGTVAAAATATGGGADTRPNSGGWRGDGWGLVGGDELPPASEFVAAMVEFRRLVRKHVLERKLTNKLGPAKLMKRDLLQLVDHTRDETLPSLGIHVHD 1980
            VLKWY+CGPTVYD AHLGHAR YVS D++RRIL   FR+++   +G+TDVDDKII+RA+ER +      AE+A D ER F +DM  L V+PP+ +TRV++H+ EII Y+++I  +G AYE+ DG G+YF  + +G  YGKL       V AS   +S   D++  S +  KK  +DFALWK +K P EPSW+SP+G GRPGWHIECSAMTH + G  LD+HSGGIDL+FPHH NEIAQCEAH +CG                             W +H++H GHL I+GLKMSKSLKNF++++++L+ H+A      + FR+FCL  KY SN+ +S DR+ +A V+  R + F      +I A   +R  A + ++    +  L       +  +  AL DDF+TP  +  L  L +  + +L +  +     + S A +  E L LLG                + S+   T+AA++        T  +S          +G        + + A+V FR  VR+  L+        PA      +L+L D  R++ LP LGIH+ D
Sbjct:   15 VLKWYACGPTVYDRAHLGHARAYVSQDILRRILEKRFRYNVFLVMGVTDVDDKIIKRAQERKIH----FAELARDEERAFFEDMEALYVQPPNTITRVSEHMSEIIEYVEKIQKNGFAYESSDGSGVYFHTKELGDAYGKLDPMRNAHVSASDVQASDVEDDDAASMVTAKKDRRDFALWKASKEPGEPSWDSPWGPGRPGWHIECSAMTHHVLGDKLDLHSGGIDLRFPHHNNEIAQCEAH-NCG--------------------VDHYHHHPEWCKHFVHFGHLYIQGLKMSKSLKNFISIKEFLEDHTA------DQFRLFCLQFKYRSNLHYSEDRIRDAVVLSDRIKSFFK----SIHAYGSERSSASKSKKCDDMDLNLLNTLFATKGSIDAALRDDFNTPLVLTLLLELISRTNQYLLDRLDAPSEVLGSVAKYVLEMLDLLGLEGLHREFAHVEQLFAITSTPRVTLAASS-------QTAESS---------ALGSS----GEDILRALVRFRAAVREEALK-------NPAASHNSAILKLCDAIRNDELPQLGIHIED 521          
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Match: W4H874_9STRA (Cysteine--tRNA ligase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H874_9STRA)

HSP 1 Score: 358 bits (920), Expect = 9.730e-111
Identity = 227/573 (39.62%), Postives = 317/573 (55.32%), Query Frame = 1
Query:  313 NAVSRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDINYALGITDVDDKIIQRARERGLRDWPDIAEMAADFERQFMDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEADGGIYFDVEGMGSGYGKLGVQASSSTTPDE------EGGSELRGKKSHKDFALWKKAK-PDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEA--HGSCGGILATAXXXXXXXXXXXXXXXXXAVTKKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAGRGQRWGQKEKWLAEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELAEGDLGPVVSAANFTAETLSLLGVGSSVGGTVAAAATATGGGADTRPNSGGWRGDGWGLVGGDELPPASEFVAAMVEFRRLVRKHVLERKLTNKLGPAKLMKRDLLQLVDHTRDETLPSLGIHVHDEPNNECTW 2004
            N+++  LD FP  S+  LKWY CGPTVYDSAHLGHAR+YVS D++RRI+T +F  DI   +G+TDVDDKII  A  +       +A +A   E  F+ +++ L V    ++TRV++H+PEIIGYIQ +  +G AY    G+YFD   MGS YGKL       +TP E      E G+    K++ +DFALWK +K PDEP WESP+GRGRPGWHIECSAMTH + G ++DVHSGG+DL+FPHH NEIAQC+A  H   G  L                          W +H++H GHL I+GLKMSKSLKNF+T+   L  +SA      + FR+FCL +KY+ NV FS DRM +A+ V  RF  F     + ++A      +   +R    +  + +  + C+ EV  AL  DFDTP A++HL  L    +    +     +  + + A +  +TL+L G+ +    ++  AA      A ++ N+         + G D +   + F A   + R L         LTN    +  + +D+L+L D  RD  LPSLGI + D    +  W
Sbjct:   31 NSLTGRLDTFPS-SSSPLKWYVCGPTVYDSAHLGHARSYVSQDILRRIVTQHFHQDIFLVMGMTDVDDKIIAAASAQQTS----MANVARHHETAFLRNLAALNVLRVSSITRVSEHIPEIIGYIQGLDSNGFAYATSDGVYFDTVAMGSSYGKLAP-----STPQEYTDIVLEDGAVGGEKRNVRDFALWKLSKTPDEPGWESPWGRGRPGWHIECSAMTHHVLGGSIDVHSGGVDLRFPHHNNEIAQCDAYHHHQAGRYLMVGSCVCFYSG-----------VDHTWCQHFVHFGHLYIKGLKMSKSLKNFITIDALLANYSA------DAFRLFCLQYKYNVNVHFSHDRMRDANAVYHRFHSFFHTLQSHVKATEAGGASEHARRVDAADFRVLDALAQCKLEVDSALRLDFDTPGALQHLLELVTATNKAWTDRPAMSVEVLCAVATYVMDTLALFGLDALRFPSLRLAAPVADDAA-SQSNA---------IQGADVMDVFTTFRA---QVRALA--------LTN---TSDKVAQDILKLCDTVRDAQLPSLGIQIEDISPGKSFW 552          
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Match: A0A024UW95_9STRA (Cysteine--tRNA ligase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UW95_9STRA)

HSP 1 Score: 357 bits (917), Expect = 1.830e-110
Identity = 228/577 (39.51%), Postives = 321/577 (55.63%), Query Frame = 1
Query:  307 VWNAVSRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDINYALGITDVDDKIIQRARERGLRDWPDIAEMAADFERQFMDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEADGGIYFDVEGMGSGYGKLGVQASSSTTPDE------EGGSELRGKKSHKDFALWKKAK-PDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEA--HGSCGGILATAXXXXXXXXXXXXXXXXXAVTKKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAGRGQRWGQKEKWLAEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELAEGDLGPVVSAANFTAETLSLLGVGSSVGGTVAAAATATGGGAD--TRPNSGGWRGDGWGLVGGDELPPASEFVAAMVEFRRLVRKHVLERKLTNKLGPAKLMKRDLLQLVDHTRDETLPSLGIHVHDEPNNECTW 2004
             +N+++  LD FP  S+  LKWY CGPTVYDSAHLGHAR+YVS D++RR+LT +F  +I   +G+TDVDDKII  A  +       +  +A   E  F+ ++++L V    ++TRV++H+PEII YIQ +  +G AY    G+YFD   MG+ YGKL        TP E      E G+    K++ +DFALWK +K P+EP WESP+GRGRPGWHIECSAMTH + G  +DVHSGG+DL+FPHH NEIAQC+A  H +C                              W +H++H GHL I+GLKMSKSLKNF+T+   L+ +SA      + FR+FCL +KY+ NV FS DRM +AS +  RF  FL    + ++AA    P  R  R    +  +    + C+++V +A+  DFDTPRA++HL  L +  +   K+     +  + + A +  +TL+L G+ +    ++  AA      AD  T  NS                  A++ + A   FR  VR   L    TN    +  + RD+L L D+ RD  LP+LGI + D    +  W
Sbjct:   30 AFNSLTGQLDAFPT-SSSPLKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTQHFHQEIFLVMGMTDVDDKIIAAAASQQTT----MTNIARTNEAAFLRNLADLNVLRVSSITRVSEHIPEIIAYIQGLGANGFAYVTSDGVYFDTVAMGAKYGKLAPN-----TPQEYDNVVPEDGAVGGEKRNVRDFALWKLSKSPEEPGWESPWGRGRPGWHIECSAMTHHVLGDAIDVHSGGVDLRFPHHNNEIAQCDAYHHHACD---------------------------HTWCKHFVHFGHLYIKGLKMSKSLKNFITIDSLLETYSA------DTFRVFCLQYKYNMNVHFSEDRMRDASAIYQRFLSFLQTLQSHVKAAAHS-PLSR--RVDGVDHTVLAALAQCKQDVDIAMRHDFDTPRALQHLLDLISHTNKTWKDHPSMSVEVLCTVATYIVDTLTLFGLATLRFPSLRLAAPV----ADDATSLNS----------------IQANDVMDAFTTFRANVRALAL----TN---TSDKVARDILNLCDNVRDVELPALGIQLEDVAPGKSFW 533          
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Match: A0A1V9YT50_9STRA (Cysteine--tRNA ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YT50_9STRA)

HSP 1 Score: 356 bits (913), Expect = 7.340e-110
Identity = 234/594 (39.39%), Postives = 314/594 (52.86%), Query Frame = 1
Query:  313 NAVSRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDINYALGITDVDDKIIQRARERGLRDWPDIAEMAADFERQFMDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEADGGIYFDVEGMGSGYGKLGVQASSSTTP---DEEG-GSELRGKKSHKDFALWKKAKP-DEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAXXXXXXXXXXXXXXXXXAVTKKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRF----LALADATIRAARKDRPAGRGQRWGQKEKWLAEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELAEG-DLGPVVSAANFTAETLSLLGVGSSVGGTVAAAATATGGGADTRPNSGGWRGDGWGLVGGDELPPASEFVAAMVEFRRLVRKHVLERKLTNKLGPAKLMKRDLLQLVDHTRDETLPSLGIHVHDEPNNECTWMVLPPERRRGRREQVDEQPV 2064
            N++S  +DP P  S   LKWY CGPTVYDSAHLGHAR+YVS D++RR+LT YFR DIN  +G+TDVDDKII  A    LR+   +  +A   E  F+ D++ L V    A+TRV++H+PEI+ YI  +  +G AY    G+YFD   +G  YGKL   A++  T    D+ G GSE   K++ +DFALWK++K  DEP W+S FGRGRPGWHIECSAMTH + G  +DVHSGGIDL FPHH NE+AQC+ +                                 W +H++H GHL I+GLKMSKSLKNF+++RD+L    A  +A    FR+FCL +KY++NV FS DRM +A+V+  RF  F    LAL+ +     R + P          +  L    +  +  V  A+ DDFDTP  +  L +L +L+   L+       +  V   A +  E   L G+  S+ G  + A  A        P S      G        L  A+  +     FR  VR+  L         P     +D+L+L D  RD TLP LGI + D       W       +     +VDE PV
Sbjct:   30 NSLSGKMDPLPLGSRP-LKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTTYFRQDINLVMGMTDVDDKIIATA----LREGRSMEAVARQHEAAFLSDLAALNVLRASAITRVSEHIPEILAYITTLERNGFAYRTTDGVYFDTVALGDDYGKLAPNAATEATDIVVDDNGIGSE---KRNSRDFALWKRSKTTDEPGWDSDFGRGRPGWHIECSAMTHHVLGGAIDVHSGGIDLCFPHHNNEVAQCDGY-------------------------HHHTPGHTWCKHFVHFGHLYIKGLKMSKSLKNFISIRDFLSEPGASSDA----FRVFCLQYKYNTNVHFSLDRMRDANVLLQRFVSFFQTVLALSKSPELCRRLETP----------DDPLLLGLARAKTAVDRAMRDDFDTPSVLVELTALMSLVHRELQARPGAVSVDVVCRVAAYVLEMCQLFGLQQSIAGFSSVALAA--------PTSAAHEASG--------LEHANAILDEFSAFRARVRQVALR-------NPKDPQCQDILKLCDILRDSTLPPLGIQIEDVAPGTAHWKT-----QVFAAAEVDEDPV 548          
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Match: D3BQM3_POLPP (Cysteine--tRNA ligase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BQM3_POLPP)

HSP 1 Score: 354 bits (908), Expect = 4.360e-109
Identity = 213/581 (36.66%), Postives = 311/581 (53.53%), Query Frame = 1
Query:  286 RPAGHPT---VWNAVSRCLDPFPDPSTGV-LKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDINYALGITDVDDKIIQRARERGLRDWPDIAEMAADFERQFMDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEADGGIYFDVEGMGS--GYGKLGVQASSSTTPDEEGGSELRG---KKSHKDFALWKKAKPDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAXXXXXXXXXXXXXXXXXAVTKKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAGRGQRWGQKEKWLAEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELAEGD-LGPVVSAANFTAETLSLLGV--GSSVGGTVAAAATATGGGADTRPNSGGWRGDGWGLVGGDELPPASEFVAAMVEFRRLVRKHVLERKLTNKLGPAKLMKRDLLQLVDHTRDETLPSLGIHVHDEPNN 1992
            +PAG P+   ++N+++    PF   S G  + WY CGPTVYD++H+GHAR+Y+S D+IRRI+ DY  +D+ Y + ITD+DDKII R+RE+G+       E++  +E  F DD+  L V PPDA+TRVT++VPEI+ ++++I+ +G AYE++G +YFD E       YGKL   +  +   + EG   L     K+++ DFALWKK+K  EP W SP+G GRPGWHIECSAM   + G N+D+HSGG DLKFPHH NEIAQ EAH  C                            K W+ ++IH+GHL I+GLKMSKSLKNF+T++D L      ++  A   RM  L+H+Y   + +S + M     +   F  F     + +R    D P    Q W Q +K L  +    +++V   L D+F+T  A+  L  L    + +L +      L  + + A +    L + G+  GS++G         +GG A+                  D L P  +   A+VEFR  +R   + +  +            +LQ  DH RDE LP LG+ + D+  N
Sbjct:   22 KPAGQPSELQIYNSLTSSKVPFTPISGGKSVSWYICGPTVYDASHMGHARSYISFDIIRRIMKDYLGYDVQYIMNITDIDDKIIIRSREQGITH----TELSRKWENSFFDDLKALNVLPPDALTRVTEYVPEIVTFVEKIIANGFAYESNGSVYFDTEAYMKVHEYGKLEPSSVGNEKLNSEGEGALSAGSDKRNNNDFALWKKSKEGEPKWNSPWGEGRPGWHIECSAMASDILGANIDIHSGGEDLKFPHHDNEIAQSEAHYGC----------------------------KQWINYFIHSGHLLIDGLKMSKSLKNFITIQDAL------KKYTARQIRMLFLIHRYDKPMNYSTESMTNVIEIEKIFTEFFHAVKSIVR----DAPQSLAQNWEQVDKDLNNQLLETKKKVHEFLLDNFNTTDAIHALNDLVKRTNVYLADKNRNPRLAILNNIATYITHILRVFGLVEGSAIG-------FGSGGSANVE----------------DTLKPVLD---ALVEFRNQIRSSAINKDFSK-----------ILQSCDHLRDEVLPLLGVKIDDKSGN 523          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig199.5959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G854_ECTSI0.000e+072.78Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CJU0_9STRA2.330e-14243.48Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A5D6Y496_9STRA1.410e-11840.14Cysteine--tRNA ligase n=1 Tax=Pythium brassicum Ta... [more]
A0A1W0AC21_9STRA3.470e-11340.58Cysteine--tRNA ligase (Fragment) n=1 Tax=Thraustot... [more]
A0A8K1CC06_PYTOL1.110e-11238.73Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3W8N7_GLOUD2.590e-11139.72Cysteine--tRNA ligase n=1 Tax=Globisporangium ulti... [more]
W4H874_9STRA9.730e-11139.62Cysteine--tRNA ligase n=6 Tax=Aphanomyces astaci T... [more]
A0A024UW95_9STRA1.830e-11039.51Cysteine--tRNA ligase n=2 Tax=Aphanomyces invadans... [more]
A0A1V9YT50_9STRA7.340e-11039.39Cysteine--tRNA ligase n=1 Tax=Achlya hypogyna TaxI... [more]
D3BQM3_POLPP4.360e-10936.66Cysteine--tRNA ligase n=1 Tax=Polysphondylium pall... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig199contigL-elsbetiae_contig199:11894..16601 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score947.6
Seed ortholog evalue3.5e-273
Seed eggNOG ortholog2880.D7G854
Preferred nameCARS2
KEGG rclassRC00055,RC00523
KEGG koko:K01883
KEGG ReactionR03650
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.cysteinyl-tRNA aminoacylation
EggNOG OGsCOG0215@1,KOG2007@2759
EC6.1.1.16
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Ec32 ortholog descriptionCysteinyl-tRNA Synthetase
Ec32 orthologEc-12_001440.1
Exons6
Model size2188
Cds size2187
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig199.5959.1prot_L-elsbetiae_contig199.5959.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig199 11894..16601 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815822.9481838-CDS-L-elsbetiae_contig199:11893..121701622815822.9481838-CDS-L-elsbetiae_contig199:11893..12170Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 11894..12170 -
1691683125.838067-CDS-L-elsbetiae_contig199:11893..121701691683125.838067-CDS-L-elsbetiae_contig199:11893..12170Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 11894..12170 -
1622815822.961781-CDS-L-elsbetiae_contig199:12840..132481622815822.961781-CDS-L-elsbetiae_contig199:12840..13248Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 12841..13248 -
1691683125.850909-CDS-L-elsbetiae_contig199:12840..132481691683125.850909-CDS-L-elsbetiae_contig199:12840..13248Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 12841..13248 -
1622815822.9718468-CDS-L-elsbetiae_contig199:13533..137131622815822.9718468-CDS-L-elsbetiae_contig199:13533..13713Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 13534..13713 -
1691683125.859959-CDS-L-elsbetiae_contig199:13533..137131691683125.859959-CDS-L-elsbetiae_contig199:13533..13713Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 13534..13713 -
1622815822.9873805-CDS-L-elsbetiae_contig199:13992..144211622815822.9873805-CDS-L-elsbetiae_contig199:13992..14421Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 13993..14421 -
1691683125.869355-CDS-L-elsbetiae_contig199:13992..144211691683125.869355-CDS-L-elsbetiae_contig199:13992..14421Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 13993..14421 -
1622815823.0000987-CDS-L-elsbetiae_contig199:14923..151141622815823.0000987-CDS-L-elsbetiae_contig199:14923..15114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 14924..15114 -
1691683125.8872204-CDS-L-elsbetiae_contig199:14923..151141691683125.8872204-CDS-L-elsbetiae_contig199:14923..15114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 14924..15114 -
1622815823.0105808-CDS-L-elsbetiae_contig199:15899..166011622815823.0105808-CDS-L-elsbetiae_contig199:15899..16601Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 15900..16601 -
1691683125.9024334-CDS-L-elsbetiae_contig199:15899..166011691683125.9024334-CDS-L-elsbetiae_contig199:15899..16601Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig199 15900..16601 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig199.5959.1

>prot_L-elsbetiae_contig199.5959.1 ID=prot_L-elsbetiae_contig199.5959.1|Name=mRNA_L-elsbetiae_contig199.5959.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=729bp
GYVGVRFYGTPNRICDRRPPFPAGLASPGALRQCARLREHPAVMAPLLCF
ARVFYGNCRPVGVKLSRTTALGTLRPGCKTATSRSRRAATTAATGRPAGH
PTVWNAVSRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIR
RILTDYFRFDINYALGITDVDDKIIQRARERGLRDWPDIAEMAADFERQF
MDDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDSGMAYEADGGIYFDVE
GMGSGYGKLGVQASSSTTPDEEGGSELRGKKSHKDFALWKKAKPDEPSWE
SPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAH
GSCGGILATAAAAAAGDEGPAGGNGGGAVTKKPWVRHWIHTGHLNIEGLK
MSKSLKNFVTVRDYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRME
EASVVRARFQRFLALADATIRAARKDRPAGRGQRWGQKEKWLAEETSTCR
REVRLALSDDFDTPRAVRHLASLCALISPHLKELAEGDLGPVVSAANFTA
ETLSLLGVGSSVGGTVAAAATATGGGADTRPNSGGWRGDGWGLVGGDELP
PASEFVAAMVEFRRLVRKHVLERKLTNKLGPAKLMKRDLLQLVDHTRDET
LPSLGIHVHDEPNNECTWMVLPPERRRGRREQVDEQPVAELDTGAGAGEK
DVAEPGDATWADGDKVELPVGDAGRRRG*
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mRNA from alignment at L-elsbetiae_contig199:11894..16601-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig199.5959.1 ID=mRNA_L-elsbetiae_contig199.5959.1|Name=mRNA_L-elsbetiae_contig199.5959.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4708bp|location=Sequence derived from alignment at L-elsbetiae_contig199:11894..16601- (Laminarionema elsbetiae ELsaHSoW15)
GGTTACGTGGGTGTCCGTTTTTATGGCACTCCCAATCGCATTTGTGATCG ACGTCCCCCCTTTCCAGCGGGCCTGGCCAGCCCAGGGGCCTTGCGGCAGT GTGCAAGGCTACGAGAGCATCCCGCCGTGATGGCGCCTCTCTTGTGCTTT GCACGAGTATTTTACGGCAATTGCAGACCTGTGGGAGTCAAGCTTTCGAG AACTACGGCACTGGGAACTCTACGACCTGGTTGCAAAACTGCAACAAGCA GGAGCAGAAGGGCAGCAACAACAGCAGCAACAGGCCGGCCAGCTGGGCAT CCCACTGTTTGGAACGCCGTCAGCCGCTGCCTGGACCCTTTCCCGGACCC ATCTACAGGGGTGCTGAAGTGGTACTCCTGTGGACCGACCGTGTACGACA GCGCTCATCTAGGGCACGCGAGGACGTACGTCTCTCTCGATGTAATCCGC CGCATCCTGACCGACTACTTTCGCTTCGACATCAACTATGCCCTGGGAAT CACCGACGTTGACGACAAGATCATCCAAAGGGCCCGGGAGAGAGGCCTGC GGGATTGGCCCGATATAGCCGAGATGGCGGCTGACTTCGAGAGGCAGTTT ATGGACGACATGTCGGAGCTCGGCGTGAGGCCCCCTGATGCGGTCACGAG GGTAACCGACCACGTCCCCGAGATCATTGGGTACATCCAGCGTATTGTCG ACGTGAGTGCCTGGAAATCGGATCGTACAGCTGCTGTGAGATCGTGCTGT CCCGTAAACATGCCGTTGGCTGTCACTGCTGTATTTTGCAACTGACATTG GGTCTGTTTTCGCCTCCAAGTTGCACCCACCGGCGCTGCTGTTGCTAGCT ACTTCTCAACCGGTGTCTTGCTGCCGCAAGGGGTGTTGTGGTGATGATGA TGGTGATGCTACACACAGATTTACATGTTGTACACAACTTGTGCTCCTTC GTGTACTCGAAAATAATAAAGCGTGGATTGTTGGCATCGCGTGCATCTTG CAAACACAACACACACACACACACACACACACACACACACACACACACAC ACACACACACACACCTAACTTGCGCATGTTTGCACCTGAGAGCAAGCACC CATTGTCGAGAGAGGAGAATCCATGCTCTGTGTGCGCCCCTCCCAGGGGG TAATGCATCGAGCAAGATGTGCAACACCAATCGCGTTGGCGTGAACCTCC CTCCTGTTTTCCGCGACCGGCGGCCTCTTTCAATCCGGAGCCTTGTCGAT TGGAAGTTAGTGTGGGTAACGGGTAACGAACCAACGAGGCTTGGGAACCA ACCCAGCTCGCCAACGTGTCCGTCTCCCTATTTTGTATGTCCATACAGCA GTAGTCGGTACACAATAGTAGTCGGCATGCCCCCAATCGGAACCCCATAC ATACGTATCCCTCCACTTCCACTCCTCTGCCGCGGTGGCGGCTGTGCCAC ACCTGGTCCCCTTCGCTTGTGTTTTTGTCATGCTCAGAGCGGCATGGCCT ACGAGGCGGACGGGGGCATCTACTTCGACGTGGAGGGCATGGGCAGCGGT TACGGCAAGCTAGGCGTTCAGGCGTCGAGCTCCACGACGCCGGACGAGGA AGGGGGGTCGGAGCTGCGCGGAAAGAAAAGCCACAAGGACTTCGCGCTTT GGAAGAAGGCTAAGCCTGACGAGCCGAGGCAAGAAAGAACGAGAAAAATG CTCGACTAGATCGGGGAGCAGAGGGAAAAAGAGCATCATGGTGGGCTCTA CCCGCTGAAAAATTGTTGGCCGACCTCGCAAATCTAAATCTTTGCAGGGG AGATGTTGAATTCTTCTGATATTTAGGTTGTTTTTTCTGCTCGCTTCGCC AAATATTACGTCTCTGTATGGAATACCGTTTGAACCCCATATCGAGTCTT TGCTCTAGTATGGGTTAGGTTCCATCTTTGATTCTTTGTTTTATTTTTAG AAAAAGGGGCGCATTCAGAGCGTGCCTTAACTTGTTGGCAGACAGGTGTA GGCAGTGCTCTGTCCTCAGGGTGAACCTGAGGCTGCAAGCTTCGTACATT GGCTGCTTTTCCTTTCTCTTTCTTGCGCTTCGCGAGTCACCAGACTACTG TAGCTTTCAGTGGGCATTCCCTTACACTACACGCCCTTCCCCCTCCATCT GATGCCGTTTCTGGAACGCGCCGAAAACAGCTGGGAGTCTCCTTTTGGGC GGGGAAGGCCGGGGTGGCACATCGAGTGCTCCGCCATGACACACTCCCTG TTCGGGCCTAACCTAGACGTGCATAGCGGCGGGATCGACCTCAAGTTTCC CCACCACACCAACGAGATTGCTCAGTGCGAGGCGCACGGCAGCTGCGGAG GCATTCTGGCGACGGCGGCGGCAGCGGCAGCGGGAGACGAAGGCCCAGCG GGTGGGAACGGCGGCGGCGCTGTTACGAAGAAGCCCTGGGTGAGGCACTG GATTCACACGGGGCACCTGAACATCGAGGGCCTGAAGATGTCAAAGTCGC TGAAGAACTTTGTGACGGTCCGGGATTACCTGGACGGGCACTCGGCGGGG CGTGAGGCGGCGGCGGAGGACTTCCGCATGTTCTGCCTCATGCACAAGTA CAGCTCCAAGTGCGTGCGAGCGAGCGAAGACCGGCAAAGCCGCGCACGCA TCCTAAAAACGTGTAAATAGCATTGTCTGCAGGGTCTTCGTCCTGATCGT ACATAGGTGCAGGATGGTCTCTTGGAGGATACTGGACTACACCTGATCGA GTAGACCTGTCTACTAGAAAACGTATGTATGATGCTTCGATGTTTGTACC GTGCAGAGAAAGGGCACCGCGACCCGAACTTGACTTGTGCCTGCTCCGCT CCCTCTGTGTGTCCAACCTCGCCTCAAAAAAAAAACAGTGTGACCTTCAG TGGGGACCGGATGGAAGAAGCCAGCGTGGTGAGAGCCCGTTTCCAACGAT TTCTGGCGCTTGCCGACGCGACGATTAGGGCTGCAAGAAAAGACCGACCA GCTGGCAGAGGACAGCGGTGGGGCCAGAAGGAAAAGTGGCTTGCAGAGGA GACGTCTACTTGCCGCAGGTGAGGAAGGAGATCGATTCGAGCATGACTAC TGTGCTTTCTTTATCCGGTCAAGCCGCCCAGGACGTACCTCGCAAAATAT TATTCCCGCCCGTATGCGCCTACCTGCTCCTTTCCTTCATGTTCCGGTCT ATAATATAGGTTCCGTCGCTTGCTGTATCTCGCTCCGGTAGTCGAGGACG AGGTTTTTCTGCCGCTGCCCACTCTTCCCCCCTCCTTATCCCCCCCCCCC GCCAACCATCACCGCCTGCACCCCCGCCGCGCGCGCGCATCCTGATTGGC CAGAGAGGTGCGCCTTGCCCTGAGCGATGACTTTGACACGCCCAGGGCGG TGCGACACCTGGCGTCGCTGTGCGCACTCATCTCGCCGCACCTGAAGGAG TTGGCAGAGGGCGACTTGGGCCCGGTTGTGTCGGCGGCCAACTTCACGGC CGAGACGCTGTCGCTGCTAGGGGTCGGGAGCAGCGTCGGGGGCACCGTGG CGGCGGCGGCGACGGCCACGGGAGGGGGGGCTGATACGAGGCCAAACAGC GGGGGGTGGAGGGGGGACGGATGGGGGTTGGTGGGCGGGGACGAGTTGCC GCCCGCTAGCGAGTTTGTTGCTGCGATGGTGGAGTTCCGGAGGCTCGTGC GAAAGCATGTCCTGGAGCGAAAGTTGACCAACAAGCTTGGCCCAGCCAAA TTGATGAAGAGGTGAGCCTGATCTACAATATGCTCGCCGGGGAAGGGGGT TGGCGGAGGAAAAAAATACGGTTCGACGGTAACCCTCCGCGAACGCGAGC GCGATTGGGGTGTTCGTTTTCAATTCGTGACAACGATGCTGCTGTCTTTT GTTTTGCTGGATCAACAGGACCTGTTGTAGTTTGGGCTACATATTTGCAT ATGGTAGTGCGGTTGCGCGGTTTTCACTAGGAGGCGAGACTCCTTCGATG GCACACGATAACAGAAGAGCCTCCGTGCGGAACACACGTATGCGTACTTG TTTAAACATTACGTGGTAGTAGTACATTATTCCTACAGAAGGCGGTACTT GTACGGTTGACGGCGTCGGGAACCTCTAGACTAATGCATTTACACAGAAA TGTTGCGAAATGTCAATCTACAAAAGTTTTGTTGTCTTCCGTGCACCTTT CTGCTGTCAAACTTGCGCCCAAGCCAAGACAGAAACGCCCCACCCCCGTG ATGTATGGTAGTACTTACGTGGCACGACACACAACCTGCGTGTGAATTTG CCCCCGCACGATCACGACGTGATGGAAGCACCTGAGTCACGCGGCTCACC TCGATCGTTTCATCAACTCAGCGCAACACAACACGACACACACAAACATC ACACACACCACACCACCAAATAAACGCGCAGGGATTTACTCCAACTTGTT GACCACACCCGCGACGAGACGCTGCCATCCCTGGGCATCCACGTCCACGA CGAGCCGAACAACGAGTGCACCTGGATGGTGCTCCCGCCCGAGCGGCGAC GAGGCCGACGAGAGCAGGTAGATGAACAGCCGGTCGCGGAGTTGGATACG GGGGCAGGGGCGGGGGAGAAGGATGTTGCGGAGCCGGGGGACGCGACTTG GGCGGATGGCGACAAGGTGGAACTTCCGGTTGGCGACGCGGGTCGAAGAC GAGGGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig199:11894..16601-

>mRNA_L-elsbetiae_contig199.5959.1 ID=mRNA_L-elsbetiae_contig199.5959.1|Name=mRNA_L-elsbetiae_contig199.5959.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4374bp|location=Sequence derived from alignment at L-elsbetiae_contig199:11894..16601- (Laminarionema elsbetiae ELsaHSoW15)
GGTTACGTGGGTGTCCGTTTTTATGGCACTCCCAATCGCATTTGTGATCG
ACGTCCCCCCTTTCCAGCGGGCCTGGCCAGCCCAGGGGCCTTGCGGCAGT
GTGCAAGGCTACGAGAGCATCCCGCCGTGATGGCGCCTCTCTTGTGCTTT
GCACGAGTATTTTACGGCAATTGCAGACCTGTGGGAGTCAAGCTTTCGAG
AACTACGGCACTGGGAACTCTACGACCTGGTTGCAAAACTGCAACAAGCA
GGAGCAGAAGGGCAGCAACAACAGCAGCAACAGGCCGGCCAGCTGGGCAT
CCCACTGTTTGGAACGCCGTCAGCCGCTGCCTGGACCCTTTCCCGGACCC
ATCTACAGGGGTGCTGAAGTGGTACTCCTGTGGACCGACCGTGTACGACA
GCGCTCATCTAGGGCACGCGAGGACGTACGTCTCTCTCGATGTAATCCGC
CGCATCCTGACCGACTACTTTCGCTTCGACATCAACTATGCCCTGGGAAT
CACCGACGTTGACGACAAGATCATCCAAAGGGCCCGGGAGAGAGGCCTGC
GGGATTGGCCCGATATAGCCGAGATGGCGGCTGACTTCGAGAGGCAGTTT
ATGGACGACATGTCGGAGCTCGGCGTGAGGCCCCCTGATGCGGTCACGAG
GGTAACCGACCACGTCCCCGAGATCATTGGGTACATCCAGCGTATTGTCG
ACGGTTACGTGGGTGTCCGTTTTTATGGCACTCCCAATCGCATTTGTGAT
CGACGTCCCCCCTTTCCAGCGGGCCTGGCCAGCCCAGGGGCCTTGCGGCA
GTGTGCAAGGCTACGAGAGCATCCCGCCGTGATGGCGCCTCTCTTGTGCT
TTGCACGAGTATTTTACGGCAATTGCAGACCTGTGGGAGTCAAGCTTTCG
AGAACTACGGCACTGGGAACTCTACGACCTGGTTGCAAAACTGCAACAAG
CAGGAGCAGAAGGGCAGCAACAACAGCAGCAACAGGCCGGCCAGCTGGGC
ATCCCACTGTTTGGAACGCCGTCAGCCGCTGCCTGGACCCTTTCCCGGAC
CCATCTACAGGGGTGCTGAAGTGGTACTCCTGTGGACCGACCGTGTACGA
CAGCGCTCATCTAGGGCACGCGAGGACGTACGTCTCTCTCGATGTAATCC
GCCGCATCCTGACCGACTACTTTCGCTTCGACATCAACTATGCCCTGGGA
ATCACCGACGTTGACGACAAGATCATCCAAAGGGCCCGGGAGAGAGGCCT
GCGGGATTGGCCCGATATAGCCGAGATGGCGGCTGACTTCGAGAGGCAGT
TTATGGACGACATGTCGGAGCTCGGCGTGAGGCCCCCTGATGCGGTCACG
AGGGTAACCGACCACGTCCCCGAGATCATTGGGTACATCCAGCGTATTGT
CGACAGCGGCATGGCCTACGAGGCGGACGGGGGCATCTACTTCGACGTGG
AGGGCATGGGCAGCGGTTACGGCAAGCTAGGCGTTCAGGCGTCGAGCTCC
ACGACGCCGGACGAGGAAGGGGGGTCGGAGCTGCGCGGAAAGAAAAGCCA
CAAGGACTTCGCGCTTTGGAAGAAGGCTAAGCCTGACGAGCCGAGAGCGG
CATGGCCTACGAGGCGGACGGGGGCATCTACTTCGACGTGGAGGGCATGG
GCAGCGGTTACGGCAAGCTAGGCGTTCAGGCGTCGAGCTCCACGACGCCG
GACGAGGAAGGGGGGTCGGAGCTGCGCGGAAAGAAAAGCCACAAGGACTT
CGCGCTTTGGAAGAAGGCTAAGCCTGACGAGCCGAGCTGGGAGTCTCCTT
TTGGGCGGGGAAGGCCGGGGTGGCACATCGAGTGCTCCGCCATGACACAC
TCCCTGTTCGGGCCTAACCTAGACGTGCATAGCGGCGGGATCGACCTCAA
GTTTCCCCACCACACCAACGAGATTGCTCAGTGCGAGGCGCACGGCAGCT
GCGGAGGCATTCTGGCGACGGCGGCGGCAGCGGCAGCGGGAGACGAAGGC
CCAGCGGGTGGGAACGGCGGCGGCGCTGTTACGAAGAAGCCCTGGGTGAG
GCACTGGATTCACACGGGGCACCTGAACATCGAGGGCCTGAAGATGTCAA
AGTCGCTGAAGAACTTTGTGACGGTCCGGGATTACCTGGACGGGCACTCG
GCGGGGCGTGAGGCGGCGGCGGAGGACTTCCGCATGTTCTGCCTCATGCA
CAAGTACAGCTCCAACTGGGAGTCTCCTTTTGGGCGGGGAAGGCCGGGGT
GGCACATCGAGTGCTCCGCCATGACACACTCCCTGTTCGGGCCTAACCTA
GACGTGCATAGCGGCGGGATCGACCTCAAGTTTCCCCACCACACCAACGA
GATTGCTCAGTGCGAGGCGCACGGCAGCTGCGGAGGCATTCTGGCGACGG
CGGCGGCAGCGGCAGCGGGAGACGAAGGCCCAGCGGGTGGGAACGGCGGC
GGCGCTGTTACGAAGAAGCCCTGGGTGAGGCACTGGATTCACACGGGGCA
CCTGAACATCGAGGGCCTGAAGATGTCAAAGTCGCTGAAGAACTTTGTGA
CGGTCCGGGATTACCTGGACGGGCACTCGGCGGGGCGTGAGGCGGCGGCG
GAGGACTTCCGCATGTTCTGCCTCATGCACAAGTACAGCTCCAATGTGAC
CTTCAGTGGGGACCGGATGGAAGAAGCCAGCGTGGTGAGAGCCCGTTTCC
AACGATTTCTGGCGCTTGCCGACGCGACGATTAGGGCTGCAAGAAAAGAC
CGACCAGCTGGCAGAGGACAGCGGTGGGGCCAGAAGGAAAAGTGGCTTGC
AGAGGAGACGTCTACTTGCCGCAGTGTGACCTTCAGTGGGGACCGGATGG
AAGAAGCCAGCGTGGTGAGAGCCCGTTTCCAACGATTTCTGGCGCTTGCC
GACGCGACGATTAGGGCTGCAAGAAAAGACCGACCAGCTGGCAGAGGACA
GCGGTGGGGCCAGAAGGAAAAGTGGCTTGCAGAGGAGACGTCTACTTGCC
GCAGAGAGGTGCGCCTTGCCCTGAGCGATGACTTTGACACGCCCAGGGCG
GTGCGACACCTGGCGTCGCTGTGCGCACTCATCTCGCCGCACCTGAAGGA
GTTGGCAGAGGGCGACTTGGGCCCGGTTGTGTCGGCGGCCAACTTCACGG
CCGAGACGCTGTCGCTGCTAGGGGTCGGGAGCAGCGTCGGGGGCACCGTG
GCGGCGGCGGCGACGGCCACGGGAGGGGGGGCTGATACGAGGCCAAACAG
CGGGGGGTGGAGGGGGGACGGATGGGGGTTGGTGGGCGGGGACGAGTTGC
CGCCCGCTAGCGAGTTTGTTGCTGCGATGGTGGAGTTCCGGAGGCTCGTG
CGAAAGCATGTCCTGGAGCGAAAGTTGACCAACAAGCTTGGCCCAGCCAA
ATTGATGAAGAGAGAGGTGCGCCTTGCCCTGAGCGATGACTTTGACACGC
CCAGGGCGGTGCGACACCTGGCGTCGCTGTGCGCACTCATCTCGCCGCAC
CTGAAGGAGTTGGCAGAGGGCGACTTGGGCCCGGTTGTGTCGGCGGCCAA
CTTCACGGCCGAGACGCTGTCGCTGCTAGGGGTCGGGAGCAGCGTCGGGG
GCACCGTGGCGGCGGCGGCGACGGCCACGGGAGGGGGGGCTGATACGAGG
CCAAACAGCGGGGGGTGGAGGGGGGACGGATGGGGGTTGGTGGGCGGGGA
CGAGTTGCCGCCCGCTAGCGAGTTTGTTGCTGCGATGGTGGAGTTCCGGA
GGCTCGTGCGAAAGCATGTCCTGGAGCGAAAGTTGACCAACAAGCTTGGC
CCAGCCAAATTGATGAAGAGGGATTTACTCCAACTTGTTGACCACACCCG
CGACGAGACGCTGCCATCCCTGGGCATCCACGTCCACGACGAGCCGAACA
ACGAGTGCACCTGGATGGTGCTCCCGCCCGAGCGGCGACGAGGCCGACGA
GAGCAGGTAGATGAACAGCCGGTCGCGGAGTTGGATACGGGGGCAGGGGC
GGGGGAGAAGGATGTTGCGGAGCCGGGGGACGCGACTTGGGCGGATGGCG
ACAAGGTGGAACTTCCGGTTGGCGACGCGGGTCGAAGACGAGGGTAAGGA
TTTACTCCAACTTGTTGACCACACCCGCGACGAGACGCTGCCATCCCTGG
GCATCCACGTCCACGACGAGCCGAACAACGAGTGCACCTGGATGGTGCTC
CCGCCCGAGCGGCGACGAGGCCGACGAGAGCAGGTAGATGAACAGCCGGT
CGCGGAGTTGGATACGGGGGCAGGGGCGGGGGAGAAGGATGTTGCGGAGC
CGGGGGACGCGACTTGGGCGGATGGCGACAAGGTGGAACTTCCGGTTGGC
GACGCGGGTCGAAGACGAGGGTAA
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