mRNA_L-elsbetiae_contig19887.5953.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig19887.5953.1
Unique NamemRNA_L-elsbetiae_contig19887.5953.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Match: A0A6H5K5B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5B9_9PHAE)

HSP 1 Score: 491 bits (1264), Expect = 1.450e-168
Identity = 246/329 (74.77%), Postives = 271/329 (82.37%), Query Frame = 1
Query:   10 VAFDLGTSRSAIGVSMPGLTEEEVIVYTPKGSGRCPSAALKTETAVLLEGQHPHRFVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPGMLFLYFKTELCKSRGYTSVDQPVATAEGGEKLPLMTVMVAVLRHFKEDVLAFLSQHLELVPAVEDVNWVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQLQLCLEPEAACLAISIKEAPLLAQAGNKIMIVDCGGGTVDITTHSVESRSPLRMMELVKATGGEWGSVCVDNTFMVWLRKLIGDEAYAVVRRTWEFYSLLDEWEEAKTMFPGEEHDTISLNMVDVVMRLGFDAKKL 996
            VA DLGTSR+AIG+S+PG +E EV V TP GSG C SA LKTETA LLE +HPH  +A+GK A  ++ K AQRDEDG    GR  TSG P MLF +FKTELCK+ GYTSVDQPVATAEGGE LPLMTVM AVLRH KEDVLA LSQ LE+ P V DVNWV+TIPAIYDDF KRFMRV+AHRAGIISAVDDASQLQLCLEPEAACLA+SIKEAPLLA+AG K+MIVDCGGGTVDITTHSVESR PL++ EL   TGGEWGSVCVD+ FMVWLRKL G  A+A VR TW FYSL+D WEEAKT F G+E + +SLNMVDVVM LGFD  KL
Sbjct:    8 VAVDLGTSRTAIGISIPGRSENEVTVCTPNGSGHCRSAQLKTETAALLEAKHPHGLLAFGKTARERFIKDAQRDEDGGGCTGRRTTSGAPNMLFRFFKTELCKNSGYTSVDQPVATAEGGETLPLMTVMTAVLRHIKEDVLAHLSQRLEVDPTVADVNWVVTIPAIYDDFAKRFMRVSAHRAGIISAVDDASQLQLCLEPEAACLAVSIKEAPLLAKAGIKLMIVDCGGGTVDITTHSVESRRPLKLKELATPTGGEWGSVCVDSMFMVWLRKLFGATAFARVRTTWAFYSLMDYWEEAKTAFQGKEDEDVSLNMVDVVMELGFDKGKL 336          
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Match: D7FKB7_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB7_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 3.730e-70
Identity = 149/354 (42.09%), Postives = 204/354 (57.63%), Query Frame = 1
Query:    1 KIVVAFDLGTSRSA----IGVSMPG-LTEEEVIVYTPKGSGRCPSAALKTETAVLLEGQHPHRFVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPG----MLFLYFKTELCKSR-GYTSVDQPVATAEGGEKLPLMTVMVAVLRHFKEDVLAFLSQHLELVPAVEDVNWVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQLQLCLEPEAACLAISIKEA--PLLAQA-GNKIMIVDCGGGTVDITTHSVESRSPLRMMELVKATGGEWGSVCVDNTFMVWLRKLIGDEAYAVVRRTWEFYSLLDEWEEAKTMFPGEEH-DTISLNMVDVVMRLGFDA---KKLRVRIN 1011
            +IVVA D GT+RSA    +G   P   T++++ V  P G G  PSA  KTETA L+  +     VA+G+AAL +            H    +   G P      LF ++KT L K + G  +V++  AT+  G+ +PL+ VM A LR+FK+D + FLS          DVNWVLT+PA+YDDF K FMR AAH AG+I  V   + L+LCLEPEAACLA+  + A  PL  +A G K+MIVDCGGGTVDITTH++ +  PL ++E+   TGG WGS  VD  F  WL++ +GD  Y  + +T    S+++ WE  K  F G E  + + LN+  +  R   D+   + LR R N
Sbjct:   95 RIVVAVDFGTTRSAWAYKVGDDEPDDKTDDKIFVRIPGGVGPAPSARTKTETAALINRRGRGELVAFGQAALER------------HAENTATAGGDPSDASEALFKWYKTTLFKPKPGENTVERVTATSTSGDVVPLLGVMTATLRYFKKDAVGFLSSLTGRTIRARDVNWVLTVPAVYDDFAKHFMRQAAHEAGMIDKVGS-TNLRLCLEPEAACLAVIPRGANNPLTCEAEGKKMMIVDCGGGTVDITTHNIVTIDPLNVVEVAAPTGGAWGSTQVDEAFKKWLQRFLGDW-YDKIAKTEILLSIMEFWERKKAAFDGHESAEPVRLNLSALGQRQMMDSHDLEDLRTRYN 434          
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Match: D7G6V4_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V4_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 2.640e-66
Identity = 138/333 (41.44%), Postives = 192/333 (57.66%), Query Frame = 1
Query:    1 KIVVAFDLGTSRSAIGVSMPGLTEEEVIVYTPKGSGRCPSAALKTETAVLLEGQHPHRFVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPGMLFLYFKTELCKSR-GYTSVDQPVATAEGGEK-LPLMTVMVAVLRHFKEDVLAFLSQHLELVPAVEDVNWVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQLQLCLEPEAACLAISIKEAPLLAQA-GNKIMIVDCGGGTVDITTHSVESRSPLRMMELVKATGGEWGSVCVDNTFMVWLRKLIGDEAYAVVRRTWEFYSLLDEWEEAKTMFPGEEHDTI-SLNMVDVVMRLGFDA 987
            + VVA D GT+RSA    + G  + +++V  P  +   PS+ +KTETA L+ G+     V++G AA+  Y   A  D   D              LF +FK +LC+SR   T V   +  + GG+  +PL+ VM A LR+FKEDVLAFLS+       V  VNWVLT+PAIYDDF KRFMR AA+ AG+I  ++  ++L+LCLEPEAACLA    + PL + A G  +M++DCGGGTVDIT H + S  PL + E+    GG +GS  VDN F VWL+  +G E +  +  T    S++  WE  K  F G +   +  LN+ ++    G+D 
Sbjct:    5 ETVVAIDFGTTRSAWAYQVSGQADNKILVKIPASADTSPSSTIKTETAALIGGRGSGGLVSFGPAAIEDY---AASDHVADQ------------ALFRWFKFDLCESRTDQTEVGSVMTESVGGQHTVPLLGVMTASLRYFKEDVLAFLSRTGGRTVDVNSVNWVLTVPAIYDDFAKRFMRQAAYEAGMIDRMNS-TRLRLCLEPEAACLAAITTDNPLTSNAEGKNMMVIDCGGGTVDITAHKIISVEPLTLEEVAAPDGGLFGSTRVDNAFRVWLKGFLG-EKFQEIETTRTLLSIMMSWERKKATFQGLDSAAVWRLNLSELA---GYDV 317          
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Match: A0A6H5JSM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM6_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.130e-58
Identity = 125/313 (39.94%), Postives = 177/313 (56.55%), Query Frame = 1
Query:    1 KIVVAFDLGTSRSAIGVSMPGLTEEEVIVYTPKGSGRCPSAALKTETAVLLEGQHPHRFVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPGMLFLYFKTELCKSRGYTSVDQPVAT--AEGGEKLPLMTVMVAVLRHFKEDVLAFLSQHLELVPAVEDVNWVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQLQLCLEPEAACLAISIKEAPLLAQAGNK-IMIVDCGGGTVDITTHSVESRSPLRMMELVKATGGEWGSVCVDNTFMVWLRKLIGDEAYAVVRRTWEFYSLLDEWEEAKTMFPGEE 930
            + +VA D GT+RSA    + G  +  ++V     S    +++ KTET  L+ G+     +A+G AA+ +Y      D+                 LF +FK +LC+SR   +    V T   E    +PL+ VM A LR+FKEDVL  LS+       V  VNWVLT+PAIYDDF KRFMR AA  AG+I  V   ++L+LCLEPEAACLA  +K+ PL + A +K +M++DCGGG VDIT H + S  PL + E+    GG +GS  VD+ F VWL++ +GD+ +  ++ T    S++  WE  K  F G +
Sbjct:   10 ETIVAIDFGTTRSAWAYQVSGQADNTILVKI-LASADTSASSTKTETVALIGGRGSGDLIAFGPAAIDEYAASDNPDDQ---------------ALFRWFKLDLCESRPDHTDFASVMTESVEARHTVPLLGVMTASLRYFKEDVLGCLSRTGGRTVDVNRVNWVLTVPAIYDDFAKRFMRQAAFEAGMIDRVHS-TRLRLCLEPEAACLAAIVKDNPLTSDATDKKMMVIDCGGGIVDITAHKIISVEPLILDEVAAPDGGLFGSTRVDHAFKVWLKEFLGDK-FQGIQTTRTLVSIMSSWESKKATFQGTD 304          
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Match: D7FNB5_ECTSI (Heat shock protein 70-putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB5_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 5.270e-50
Identity = 120/318 (37.74%), Postives = 174/318 (54.72%), Query Frame = 1
Query:    4 IVVAFDLGTSRSAIGVSMPGLTEEEVIVYTPKGSGRCPSAALKTETAVLL------EGQHPHRFVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPGMLFLYFKTELCKS----RGYTSVDQPVATAEGGEKLPLMTVMVAVLRHFKEDVLAFLSQHLELVPAVEDVN--WVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQLQLCLEPEAACLAISIKEAPLLA-QAGNKIMIVDCGGGTVDITTHSVESRSPLRMMELVKATGGEWGSVCVDNTFMVWLRKLIGDEAYAVVRR--TWEFYSLLDEWEEAKT 912
            IV A DLGTSR+A   ++ G   E + +  P       +   KT TAVL+      E +   R   +G  A   Y   A+ DE  + R           +LF +FK EL +     R    VD+P A A GGE LP++ V+   + + K  +L  +S    ++   +D    WV+T+PAI+ +FGKRFMR A+HRAG+I+  +D   L+LCLEPEAACLA+      + +   G+KIM++DCGGGT+DIT+H VES  PL++ EL +  GG WGS  VD  F  +L++   + +  + R   T E +++  EWE  KT
Sbjct:    6 IVAAIDLGTSRTAYAYTVVG--REHIWLGVPDSPDDDRNVERKTLTAVLMQRCDEDEAEGGWRVAGFGDTAEEDYLT-AKADEADEDRGSL--------VLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEVLPMIFVVSKAIEYIKNQILDRVS----MIAQEDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDTRFKAFLQEFFDNASGGMTRLEGTHELFAVTVEWERQKT 308          
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Match: D7G266_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G266_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 5.210e-46
Identity = 123/351 (35.04%), Postives = 184/351 (52.42%), Query Frame = 1
Query:    4 IVVAFDLGTSRSAIGVSMPGLTEEEVIVYTPKGSGRCP-SAALKTETAVLLEGQHPHR-----FVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPGMLFLYFKTELCKSRGYTSVDQPVATAEG-----GEKLPLMTVMVAVLRHFKEDVLAFLSQHLELVPAVEDVNWVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQLQLCLEPEAACLAISIKEAPLLA-QAGNKIMIVDCGGGTVDITTHSVESRSPLRMMELVKATGGEWGSVCVDNTFMVWLRKLIG--DEAYAVVRRTWEFYSLLDEWEEAKT-MFPGEEHDTISLNMVDVVMRLGFDAKKLRVRIN 1011
            ++ A DLGTSRSA   ++ G   +++I+  P        S   KT TA+LL+ + P +      V +G  A  +Y +   +        G  A S +   LF YFK EL K     +    V  AEG       +LPL+ V+   L + K+ V+  L++         D+ WVLT+PAI+  FG  FMR AA RAG+I   +D   L+LCLEPEAACL +      +   + G K+M++DCGGGT+DITTH V S +PL + EL +  GG WGS   D  F +++++L+   DE +A + ++ E + L+ +WE  KT  +PG+        M+D+V     D +  R + N
Sbjct:    5 VIAAIDLGTSRSAYAYTVTG--RDDIILGVPGRLNESKVSVERKTATAILLK-RAPKKSGGWCMVTFGDGAEQEYLEARTK--------GGEAESDL--ALFKYFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVINRLNKADSHTLKAFDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQRENDMEHLRLCLEPEAACLTVEHHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELLRCTDEQWARLDKSTEMFELMADWEAKKTDHYPGKNVWISIAGMLDLVGMSVKDCEASRKQFN 342          
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Match: A0A6H5K4X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4X7_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 2.780e-44
Identity = 109/288 (37.85%), Postives = 150/288 (52.08%), Query Frame = 1
Query:    4 IVVAFDLGTSRSAIGVSMPGLTEEEVIVYTPKGSGRCPSAAL----KTETAVLLEGQHPHR----FVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPGMLFLYFKTELCKSRGYTSVDQPVATAEG-----GEKLPLMTVMVAVLRHFKEDVLAFLSQHLELVPAVEDVNWVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQLQLCLEPEAACLAISIKEAPLLA-QAGNKIMIVDCGGGTVDITTHSVESRSPLRMMELVKATGGEWGSVCVDNTFMVWLR 825
            ++ A DLGTSRSA   ++ G   +E+I+  P   GR   + +    KT TAVLL     +R     V +G  A  +Y          D R G    +G    LF YFK EL K     +    +  AEG       +LPL+ V+   L + K+ ++  L+          D+ WVLT+PAI+  FGK FMR AA RAG+I   +D   L+LCLEPEAACL +      +   + G K+M++DCGGGTVDITTH V    PL + EL + TGG WGS   D  F ++++
Sbjct:    5 VIAAIDLGTSRSAYAYTVVG--RDEIILGVP---GRLNESKVAVERKTATAVLLRRSSENRGGWCMVTFGDGAEQEYL---------DARNGDGEAAGNLA-LFKYFKMELFKGGRNGTKRSSIDDAEGISEDEKTRLPLVYVVSLALEYIKDVIINRLNNADSHTLRASDIRWVLTVPAIWSSFGKAFMRSAALRAGLIQDENDMEHLRLCLEPEAACLTVEHHHHNIRKWETGMKVMVLDCGGGTVDITTHHVVRMDPLGLEELEEPTGGPWGSTTADTKFKLFIK 277          
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Match: L1K181_GUITC (Heat shock protein 70-like protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K181_GUITC)

HSP 1 Score: 140 bits (352), Expect = 1.900e-33
Identity = 101/305 (33.11%), Postives = 154/305 (50.49%), Query Frame = 1
Query:   10 VAFDLGTSRSAIGVSMPGLTEEEVIVYTPKGSGRCPSAALKTETAVLLEGQHPHRFVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPGMLFLY-FKTELCKSRGYTSVDQPVATAEGGEKLPLMTVMVAVLRHFKEDVLAFLSQHLELVPAVEDVNWVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQL-QLCLEPEAACLAISIKEAPLLAQAGNKIMIVDCGGGTVDITTHSVESRSPLRMMELVKATGGEWGSVCVDNTFMVWLRKLIGDEAYAVVRRTWEFYSLLDEWEEAKTMF 918
            V  D GTSR+    +     +E   ++  +  G+ P    KT T +LL       F+A+G  A  +Y +                  G P  LF   FK  L +  G +    PV +A  G +  L TV+   L++ K++ +A L++   +    + V WV+T+PAI+ D  K  MR AA  A +I   ++ SQL QL LEPEAAC+    +   L  +AG++ M+VDCGGGT+DIT   V S +PL + EL   +GG WGS  VD  F  ++ +L+G++A+   + +  +  +L  WE  K  F
Sbjct:   34 VGIDFGTSRTGFAYAFMDRQDE---IFCREPGGQEPG---KTLTNLLLT--RDEEFIAFGSRAREEYYE------------------GDPSALFFENFKMLLNEVDGGS---YPVVSALNGREASLRTVLAHSLKYVKDEAMATLNRCSAVEIKADQVKWVVTVPAIWSDCAKAMMRKAALDAALIK--EETSQLLQLALEPEAACMVCERENVCL--RAGDQFMVVDCGGGTIDITMSCVHSCNPLSLDELAAPSGGPWGSTYVDREFEKFILELLGEQAFNCSKESVVWIEVLRTWEAVKNSF 305          
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Match: UPI001E1DF230 (heat shock 70 kDa protein 12A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF230)

HSP 1 Score: 137 bits (345), Expect = 9.290e-33
Identity = 111/311 (35.69%), Postives = 157/311 (50.48%), Query Frame = 1
Query:    4 IVVAFDLGTSRSAIGVSMPGLTEEEVIVYTPKG--SGRCPSAALKTETAVLLEGQHPHRFVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPGMLFLY-FKTELCKSRGYTSVDQPVATAE--GGEKLPLMTVMVAVLRHFKEDVLAFLSQHLELVPAVE--DVNWVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQLQLCLEPEAA---CLAISIKEAPLLAQAGNKIMIVDCGGGTVDITTHSVESRSPLRMMELVKATGGEWGSVCVDNTFMVWLRKLIGDEAYAVVRRTW--EFYSLLDEWE 900
            +V AFD GT+ S    S     ++ + V T +G  +G     +LKT T VLL  +    F ++G  A  +Y   A   ED  HR          G LF   FK  L  +   +       T E   G K+P MT+    +R+ K+    FL Q  +    VE  D+ +V+T+PAI+DD  K+FMR AA +A I     D  +L+L LEPEAA   C  ++ +    L+ +G K M+VD GGGT DI+ H       L+  EL K++GG WG + VDN +M WL KL G  A   +R+    E++ LL E+E
Sbjct:   11 LVAAFDFGTTYSGYSFSF---RDDPLKVQTNQGWNAGSEKLISLKTPTCVLLNDKK--EFHSFGFEAENKYGSLA---EDNKHR----------GWLFFRRFKMLLHNNESLSRA----TTIEDINGTKMPAMTIFSMSIRYLKDH---FLEQLNKQTTGVEETDIQYVITVPAIWDDSAKQFMREAAEQADI-----DKDRLKLALEPEAASIWCQLVTTEAKGALSGSGTKYMVVDLGGGTADISVHEKSKDGTLK--ELHKSSGGPWGGMYVDNNYMTWLEKLFGKTALEKLRKEEMAEYFDLLREFE 289          
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Match: UPI001E1E0E56 (heat shock 70 kDa protein 12B-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0E56)

HSP 1 Score: 137 bits (344), Expect = 1.750e-32
Identity = 101/288 (35.07%), Postives = 144/288 (50.00%), Query Frame = 1
Query:    4 IVVAFDLGTSRSAIGVSMPGLTEEEVIVYTPKG--SGRCPSAALKTETAVLLEGQHPHRFVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPGMLFLYFKTELCKSRGYTSVDQPVATAEGGEKLPLMTVMVAVLRHFKEDVLAFLSQHLELVPAVE--DVNWVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQLQLCLEPEAA---CLAISIKEAPLLAQAGNKIMIVDCGGGTVDITTHSVESRSPLRMMELVKATGGEWGSVCVDNTFMVWLRKLIGDEA 846
            +VVA+D GT+ S    S      E + V T +   +G     +LKT T VLL      +F ++G  A  +Y + A  DE                +LF  FK  L   +  T   Q       G  +P MT+    +R+ KE    FLSQ  + V  V+  D+ +V+T+PAI+DD  K+FMR AA  AGI     D ++L+L LEPEAA   C  +   +   + ++G K M+VD GGGTVD++ H +     L   EL +A+GG WG   VDN ++ WL K+ G  A
Sbjct:   16 LVVAYDFGTTYSGYAFSF---RNEPLNVRTNQNWIAGSEKLVSLKTPTCVLLSPDK--QFHSFGYEAENKYSELAFDDEH------------TGWLLFRRFKMSLYNQKKLTREAQ--IDDINGNPMPAMTIFAMSIRYLKEH---FLSQLDKQVTGVQETDIQYVITVPAIWDDSAKQFMREAAVEAGI-----DTTRLRLALEPEAASVWCQTLKDDDVAAVTESGTKYMVVDLGGGTVDVSVHEMNPDGSLN--ELHEASGGPWGGTSVDNNYIAWLSKIFGQRA 274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19887.5953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5B9_9PHAE1.450e-16874.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKB7_ECTSI3.730e-7042.09Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=287... [more]
D7G6V4_ECTSI2.640e-6641.44Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JSM6_9PHAE1.130e-5839.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNB5_ECTSI5.270e-5037.74Heat shock protein 70-putative n=2 Tax=Ectocarpus ... [more]
D7G266_ECTSI5.210e-4635.04Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5K4X7_9PHAE2.780e-4437.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L1K181_GUITC1.900e-3333.11Heat shock protein 70-like protein n=1 Tax=Guillar... [more]
UPI001E1DF2309.290e-3335.69heat shock 70 kDa protein 12A-like n=1 Tax=Mercena... [more]
UPI001E1E0E561.750e-3235.07heat shock 70 kDa protein 12B-like n=1 Tax=Mercena... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19887contigL-elsbetiae_contig19887:250..1263 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score146.4
Seed ortholog evalue2.5e-32
Seed eggNOG ortholog72019.SARC_05997T0
Preferred nameHSPA12A
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATP binding
EggNOG OGsCOG0443@1,KOG0101@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1014
Cds size1014
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815822.608785-CDS-L-elsbetiae_contig19887:249..12631622815822.608785-CDS-L-elsbetiae_contig19887:249..1263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19887 250..1263 -
1691683125.6426194-CDS-L-elsbetiae_contig19887:249..12631691683125.6426194-CDS-L-elsbetiae_contig19887:249..1263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19887 250..1263 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19887.5953.1prot_L-elsbetiae_contig19887.5953.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig19887 250..1263 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig19887.5953.1

>prot_L-elsbetiae_contig19887.5953.1 ID=prot_L-elsbetiae_contig19887.5953.1|Name=mRNA_L-elsbetiae_contig19887.5953.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=338bp
KIVVAFDLGTSRSAIGVSMPGLTEEEVIVYTPKGSGRCPSAALKTETAVL
LEGQHPHRFVAYGKAALGQYKKQAQRDEDGDHRPGRSATSGVPGMLFLYF
KTELCKSRGYTSVDQPVATAEGGEKLPLMTVMVAVLRHFKEDVLAFLSQH
LELVPAVEDVNWVLTIPAIYDDFGKRFMRVAAHRAGIISAVDDASQLQLC
LEPEAACLAISIKEAPLLAQAGNKIMIVDCGGGTVDITTHSVESRSPLRM
MELVKATGGEWGSVCVDNTFMVWLRKLIGDEAYAVVRRTWEFYSLLDEWE
EAKTMFPGEEHDTISLNMVDVVMRLGFDAKKLRVRIN*
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mRNA from alignment at L-elsbetiae_contig19887:250..1263-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19887.5953.1 ID=mRNA_L-elsbetiae_contig19887.5953.1|Name=mRNA_L-elsbetiae_contig19887.5953.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig19887:250..1263- (Laminarionema elsbetiae ELsaHSoW15)
AAGATCGTCGTCGCCTTCGACTTGGGAACAAGCCGCAGCGCCATCGGTGT GTCGATGCCGGGCCTAACGGAGGAGGAGGTCATCGTGTACACCCCCAAGG GCAGCGGGCGTTGCCCGTCCGCGGCCTTGAAGACAGAGACCGCCGTTCTC CTGGAGGGCCAGCACCCTCATCGTTTTGTGGCCTACGGCAAGGCTGCTCT GGGGCAATATAAAAAGCAAGCTCAACGAGATGAGGATGGCGACCACCGCC CTGGCCGCTCCGCTACCTCCGGGGTTCCGGGCATGCTCTTTCTCTACTTC AAGACGGAGTTGTGCAAGAGCCGTGGGTACACATCGGTCGACCAACCGGT GGCTACCGCAGAGGGCGGGGAAAAGCTCCCTCTCATGACGGTCATGGTTG CGGTTCTGCGACACTTCAAAGAAGACGTTCTCGCCTTCCTGTCGCAGCAT CTAGAGTTAGTCCCAGCCGTCGAAGACGTGAACTGGGTCCTGACGATTCC CGCCATCTACGACGACTTCGGAAAGCGCTTCATGCGCGTCGCTGCTCATA GGGCTGGCATCATCAGTGCGGTGGACGATGCCTCGCAGCTTCAGCTCTGC CTCGAACCAGAGGCGGCGTGCCTGGCCATCAGCATCAAAGAGGCGCCACT GCTCGCTCAGGCCGGCAACAAGATCATGATCGTAGATTGCGGAGGCGGAA CGGTAGATATCACCACCCATTCCGTGGAGTCCCGCTCTCCATTGAGGATG ATGGAGCTTGTGAAGGCGACCGGGGGAGAGTGGGGGTCGGTGTGTGTGGA CAACACGTTCATGGTGTGGCTTCGGAAACTCATCGGTGACGAAGCCTATG CCGTGGTTCGTCGCACCTGGGAATTCTACTCCCTGCTGGACGAATGGGAG GAAGCCAAGACGATGTTTCCAGGCGAAGAGCACGACACTATCTCGCTCAA CATGGTAGACGTGGTGATGCGCCTGGGGTTCGACGCCAAGAAGCTGAGGG TAAGAATAAATTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig19887:250..1263-

>mRNA_L-elsbetiae_contig19887.5953.1 ID=mRNA_L-elsbetiae_contig19887.5953.1|Name=mRNA_L-elsbetiae_contig19887.5953.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2028bp|location=Sequence derived from alignment at L-elsbetiae_contig19887:250..1263- (Laminarionema elsbetiae ELsaHSoW15)
AAGATCGTCGTCGCCTTCGACTTGGGAACAAGCCGCAGCGCCATCGGTGT
GTCGATGCCGGGCCTAACGGAGGAGGAGGTCATCGTGTACACCCCCAAGG
GCAGCGGGCGTTGCCCGTCCGCGGCCTTGAAGACAGAGACCGCCGTTCTC
CTGGAGGGCCAGCACCCTCATCGTTTTGTGGCCTACGGCAAGGCTGCTCT
GGGGCAATATAAAAAGCAAGCTCAACGAGATGAGGATGGCGACCACCGCC
CTGGCCGCTCCGCTACCTCCGGGGTTCCGGGCATGCTCTTTCTCTACTTC
AAGACGGAGTTGTGCAAGAGCCGTGGGTACACATCGGTCGACCAACCGGT
GGCTACCGCAGAGGGCGGGGAAAAGCTCCCTCTCATGACGGTCATGGTTG
CGGTTCTGCGACACTTCAAAGAAGACGTTCTCGCCTTCCTGTCGCAGCAT
CTAGAGTTAGTCCCAGCCGTCGAAGACGTGAACTGGGTCCTGACGATTCC
CGCCATCTACGACGACTTCGGAAAGCGCTTCATGCGCGTCGCTGCTCATA
GGGCTGGCATCATCAGTGCGGTGGACGATGCCTCGCAGCTTCAGCTCTGC
CTCGAACCAGAGGCGGCGTGCCTGGCCATCAGCATCAAAGAGGCGCCACT
GCTCGCTCAGGCCGGCAACAAGATCATGATCGTAGATTGCGGAGGCGGAA
CGGTAGATATCACCACCCATTCCGTGGAGTCCCGCTCTCCATTGAGGATG
ATGGAGCTTGTGAAGGCGACCGGGGGAGAGTGGGGGTCGGTGTGTGTGGA
CAACACGTTCATGGTGTGGCTTCGGAAACTCATCGGTGACGAAGCCTATG
CCGTGGTTCGTCGCACCTGGGAATTCTACTCCCTGCTGGACGAATGGGAG
GAAGCCAAGACGATGTTTCCAGGCGAAGAGCACGACACTATCTCGCTCAA
CATGGTAGACGTGGTGATGCGCCTGGGGTTCGACGCCAAGAAGCTGAGGG
TAAGAATAAATTAGAAGATCGTCGTCGCCTTCGACTTGGGAACAAGCCGC
AGCGCCATCGGTGTGTCGATGCCGGGCCTAACGGAGGAGGAGGTCATCGT
GTACACCCCCAAGGGCAGCGGGCGTTGCCCGTCCGCGGCCTTGAAGACAG
AGACCGCCGTTCTCCTGGAGGGCCAGCACCCTCATCGTTTTGTGGCCTAC
GGCAAGGCTGCTCTGGGGCAATATAAAAAGCAAGCTCAACGAGATGAGGA
TGGCGACCACCGCCCTGGCCGCTCCGCTACCTCCGGGGTTCCGGGCATGC
TCTTTCTCTACTTCAAGACGGAGTTGTGCAAGAGCCGTGGGTACACATCG
GTCGACCAACCGGTGGCTACCGCAGAGGGCGGGGAAAAGCTCCCTCTCAT
GACGGTCATGGTTGCGGTTCTGCGACACTTCAAAGAAGACGTTCTCGCCT
TCCTGTCGCAGCATCTAGAGTTAGTCCCAGCCGTCGAAGACGTGAACTGG
GTCCTGACGATTCCCGCCATCTACGACGACTTCGGAAAGCGCTTCATGCG
CGTCGCTGCTCATAGGGCTGGCATCATCAGTGCGGTGGACGATGCCTCGC
AGCTTCAGCTCTGCCTCGAACCAGAGGCGGCGTGCCTGGCCATCAGCATC
AAAGAGGCGCCACTGCTCGCTCAGGCCGGCAACAAGATCATGATCGTAGA
TTGCGGAGGCGGAACGGTAGATATCACCACCCATTCCGTGGAGTCCCGCT
CTCCATTGAGGATGATGGAGCTTGTGAAGGCGACCGGGGGAGAGTGGGGG
TCGGTGTGTGTGGACAACACGTTCATGGTGTGGCTTCGGAAACTCATCGG
TGACGAAGCCTATGCCGTGGTTCGTCGCACCTGGGAATTCTACTCCCTGC
TGGACGAATGGGAGGAAGCCAAGACGATGTTTCCAGGCGAAGAGCACGAC
ACTATCTCGCTCAACATGGTAGACGTGGTGATGCGCCTGGGGTTCGACGC
CAAGAAGCTGAGGGTAAGAATAAATTAG
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