mRNA_L-elsbetiae_contig19847.5933.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Match: D8LDM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM7_ECTSI) HSP 1 Score: 128 bits (321), Expect = 1.090e-33 Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = 1 Query: 4 FRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVSPVTWKAVAVLRHVHP 198 +RV+FYSLAGKLVGRLEAY HALGV+S+AWSPDGTLLSVGSYDQC RLVSPVTWKAVAVLRHVHP Sbjct: 207 YRVMFYSLAGKLVGRLEAYSHALGVKSMAWSPDGTLLSVGSYDQCARLVSPVTWKAVAVLRHVHP 271
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Match: A0A6H5KUS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS3_9PHAE) HSP 1 Score: 122 bits (305), Expect = 5.730e-31 Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 1 Query: 4 FRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVSPVTWKAVAVLRHVHP 198 +RV+FYSLAGKLVGRLEAY ALGV+S+AWSP GTLLSVGSYDQC RLVSPVTWKAVAVLRHVHP Sbjct: 215 YRVMFYSLAGKLVGRLEAYSRALGVKSMAWSPAGTLLSVGSYDQCARLVSPVTWKAVAVLRHVHP 279
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Match: W4FZL7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZL7_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.160e-16 Identity = 34/62 (54.84%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 4 FRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVSPVTWKAVAVLRH 189 +RVLFYS+ G L+ + EAY+HALG++S+AWSP G L++GS+D+ VRL+S + WK +A L H Sbjct: 235 YRVLFYSIEGDLLHQYEAYQHALGIKSMAWSPSGQFLALGSFDEKVRLMSHMHWKCIAELDH 296
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Match: A0A024TM13_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TM13_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.240e-15 Identity = 33/62 (53.23%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 4 FRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVSPVTWKAVAVLRH 189 +RVLFYS+ G L+ + EAY+HALG++S+ WSP G L+VGS+D+ +RL+S + WK +A L H Sbjct: 231 YRVLFYSIDGDLLHQFEAYQHALGIKSMVWSPSGQFLAVGSFDEKIRLLSHMHWKCIAELDH 292
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Match: A0A485K5F4_9STRA (Aste57867_1501 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5F4_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 4.050e-15 Identity = 34/62 (54.84%), Postives = 50/62 (80.65%), Query Frame = 1 Query: 4 FRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVSPVTWKAVAVLRH 189 +R+LFYS+ G L+ + EAY++ALGV++++WSP G L+VGSYD+ VRLVS + WK++A L H Sbjct: 196 YRLLFYSVDGVLLHQFEAYQNALGVKTMSWSPSGQFLAVGSYDEKVRLVSHMHWKSIAELDH 257
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Match: A0A1V9Y9N4_9STRA (WD repeat-containing protein 8-like (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y9N4_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 4.740e-15 Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 4 FRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVSPVTWKAVAVLRH 189 +RVLFY+ G L+ EAYEHALG++S++WSP G +++GSYD+ VRL+S + WK VA L H Sbjct: 1160 YRVLFYAPDGTLLQSYEAYEHALGIKSMSWSPSGQFVAIGSYDERVRLLSNLHWKPVAELEH 1221
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Match: A0A8B6BS87_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BS87_MYTGA) HSP 1 Score: 74.7 bits (182), Expect = 1.200e-14 Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 4 FRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVSPVTWKAVAVLRHVHP 198 +++L YS+ G+ V + AYE+ALGV+S+AWSP L++GSYD+ VR+++ +TWK VA H HP Sbjct: 4 YKILVYSVDGRCVSKYSAYENALGVKSIAWSPTSQFLAIGSYDEKVRILNHITWKTVA--EHSHP 66
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Match: UPI000359A7DC (WD repeat-containing protein WRAP73 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359A7DC) HSP 1 Score: 75.5 bits (184), Expect = 2.190e-14 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 4 FRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVSPVTWKAVAVLRH 189 +RVL YSL G+ + R AY+ ALGV++LAWSP L++GSYD+ +RL++ VTWK +A L H Sbjct: 202 YRVLLYSLDGRCLARYSAYDLALGVKTLAWSPSSQFLAIGSYDEKLRLLNHVTWKTIATLPH 263
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Match: A0A6P8P278_GEOSA (WD repeat-containing protein WRAP73 isoform X4 n=8 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8P278_GEOSA) HSP 1 Score: 74.7 bits (182), Expect = 3.870e-14 Identity = 31/64 (48.44%), Postives = 47/64 (73.44%), Query Frame = 1 Query: 1 RFRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVSPVTWKAVAVLRHV 192 +F+VL YSL G+L+ AYE +LG++S+ WSP L++GSYD+ VR+++ VTWK +A L H+ Sbjct: 202 QFKVLLYSLDGRLLSTYSAYEWSLGIKSITWSPSSQFLAIGSYDEKVRILNHVTWKPIAELEHL 265
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Match: A0A1S3II40_LINUN (WD repeat-containing protein WRAP73-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3II40_LINUN) HSP 1 Score: 74.7 bits (182), Expect = 3.930e-14 Identity = 30/63 (47.62%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 1 RFRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVSPVTWKAVAVLRH 189 +++VL YS+ G+ + AYEHALGV+++AW+P L++GSYDQ VR+++ +TW+AVA H Sbjct: 201 QYKVLLYSVDGRCLSEYSAYEHALGVKNIAWAPSSQFLAIGSYDQKVRILNHITWRAVAEFDH 263 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19847.5933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19847.5933.1 >prot_L-elsbetiae_contig19847.5933.1 ID=prot_L-elsbetiae_contig19847.5933.1|Name=mRNA_L-elsbetiae_contig19847.5933.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=66bp RFRVLFYSLAGKLVGRLEAYEHALGVRSLAWSPDGTLLSVGSYDQCVRLVback to top mRNA from alignment at L-elsbetiae_contig19847:380..577+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19847.5933.1 ID=mRNA_L-elsbetiae_contig19847.5933.1|Name=mRNA_L-elsbetiae_contig19847.5933.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=198bp|location=Sequence derived from alignment at L-elsbetiae_contig19847:380..577+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19847:380..577+ >mRNA_L-elsbetiae_contig19847.5933.1 ID=mRNA_L-elsbetiae_contig19847.5933.1|Name=mRNA_L-elsbetiae_contig19847.5933.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=396bp|location=Sequence derived from alignment at L-elsbetiae_contig19847:380..577+ (Laminarionema elsbetiae ELsaHSoW15)back to top |