mRNA_L-elsbetiae_contig19798.5908.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig19798.5908.1
Unique NamemRNA_L-elsbetiae_contig19798.5908.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Match: D7FIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN4_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 3.400e-145
Identity = 244/311 (78.46%), Postives = 272/311 (87.46%), Query Frame = 1
Query:    1 VCSARELIAPARAKSGIRSLKSAAKTLAEQLNKTRSDSQSALARMEKWRERKEALPEYEK--QLANKEKAWFEREGPTNDQALRRTRALLPVGVTGLTVAQLEQRAIEAGSLYPRELAVRLKENRLLHWIVTHRDDIARSNFLRGDHAHFFTNLDQYDLVELRAVMACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGETVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQRRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRARDEAKMEVDR 927
            VCSARELIAPARAKSG+  ++ AAKTLAE L KTRS SQ+ALARMEKWRERKEALPEY +  ++A++EKAWFERE   ND AL+RTR L+PVGVT LTVA+LEQ A++AGSLYPREL +R+KENRLLHW+VTH DDIARSNFLRGDHAHFFTNLD+YDLVELRA+MACLPAKFEVDADGRKAAWR  FLQR Q LVAQERG+TVSGGWDPE+ ARR+VQLP+LT EQ RRKEYFYPTAAE+E +V+KLQE           LA VKD+LLPEAKEEYANVLEDTRHPANKEAF+PEDLRRARDEAK EVDR
Sbjct:  943 VCSARELIAPARAKSGLSGIQDAAKTLAEDLRKTRSGSQAALARMEKWRERKEALPEYGQGNEVADQEKAWFEREREANDLALQRTRKLIPVGVTRLTVAELEQHALDAGSLYPRELTLRIKENRLLHWVVTHPDDIARSNFLRGDHAHFFTNLDKYDLVELRAIMACLPAKFEVDADGRKAAWRELFLQRAQSLVAQERGDTVSGGWDPEIGARREVQLPQLTPEQTRRKEYFYPTAAEVEDRVQKLQEXXXXXXXXXXXLAHVKDELLPEAKEEYANVLEDTRHPANKEAFRPEDLRRARDEAKSEVDR 1253          
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Match: D7FT01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT01_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 1.310e-129
Identity = 212/304 (69.74%), Postives = 260/304 (85.53%), Query Frame = 1
Query:   10 ARELIAPARAKSGIRSLKSAAKTLAEQLNKTRSDSQSALARMEKWRERKEALPEYEKQLANKEKAWFEREGPTNDQALRRTRALLPVGVTGLTVAQLEQRAIEAGSLYPRELAVRLKENRLLHWIVTHRDDIARSNFLRGDHAHFFTNLDQYDLVELRAVMACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGETVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQRRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRARDEAKMEV 921
            ARELIAP +A +G++ L++A K +AE L+KTR D Q+AL  ME WRERKEALPEY K +A +EKAWFERE   N++ALR  R+L+PVGVTGLTV++LEQRA++ GSLYPR+L++RLKENRLLHW V H +DIARSNFL+G HAHFFTNLD+YDLVE+RAVMACLPAKFEVD DGRK AWRA F+QR +GLVAQERG+TVSGGWDP++ ARRQV+LP+L+A QARR+EYFYPTA +++  V+KL+ERQR+L+ KQA LA+V+D+LLPEA+EEY  VLEDTRHP N+    PEDLR AR+EAK EV
Sbjct:  395 ARELIAPTQAVNGLQDLEAATKAMAEGLSKTRRDCQTALESMELWRERKEALPEYIKHVAKEEKAWFEREAAANEKALRCMRSLIPVGVTGLTVSELEQRAVDGGSLYPRDLSLRLKENRLLHWTVMHPEDIARSNFLQGAHAHFFTNLDKYDLVEMRAVMACLPAKFEVDDDGRKTAWRAEFVQRAKGLVAQERGDTVSGGWDPKISARRQVRLPELSAGQARREEYFYPTAEKVQGTVDKLRERQRKLKAKQADLAKVRDKLLPEAREEYDYVLEDTRHPVNRVTRTPEDLRSAREEAKSEV 698          
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Match: D7FTS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS2_ECTSI)

HSP 1 Score: 391 bits (1005), Expect = 6.760e-125
Identity = 207/309 (66.99%), Postives = 261/309 (84.47%), Query Frame = 1
Query:    1 VCSARELIAPARAKSGIRSLKSAAKTLAEQLNKTRSDSQSALARMEKWRERKEALPEYEKQLANKEKAWFEREGPTNDQALRRTRALLPVGVTGLTVAQLEQRAIEAGSLYPRELAVRLKENRLLHWIVTHRDDIARSNFLRGDHAHFFTNLDQYDLVELRAVMACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGETVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQRRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRARDEAKMEVDR 927
            V SAREL+ PARA+SG+ S++++AKT++E L++T   S            RKE LPEY K L+++E AWFERE   NDQALR  R+L+PVGVTGLTVAQLEQ AI+ GSL+PREL++RLKENRLL W+V H +DIARSNFL+G HAHFFTN+D+YDLVE+RA++ACLPAKFEVD DGRKAAWRA F+QR +GLVAQERG+TVS GWDPE+ ARRQV+LP+L+A Q RR+EYFYPTA E++ +V+KL+ERQ RLE K+A+LA+V+D+LLPEA++E+A+VLEDTRHP NK+ +KPEDLRRAR+EAK EV+R
Sbjct:  419 VGSARELVVPARARSGLDSIEASAKTMSEGLSQTSPRSS-----------RKETLPEYVKHLSDEEAAWFEREADANDQALRSMRSLMPVGVTGLTVAQLEQAAIDGGSLFPRELSLRLKENRLLQWVVMHPEDIARSNFLQGAHAHFFTNMDKYDLVEMRAILACLPAKFEVDDDGRKAAWRAEFVQRAKGLVAQERGDTVSRGWDPEISARRQVRLPELSAGQTRREEYFYPTAVEVQARVDKLRERQCRLEAKRAELAEVRDKLLPEARQEHADVLEDTRHPFNKKTWKPEDLRRAREEAKSEVNR 716          
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Match: D7FMC3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC3_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 6.860e-105
Identity = 189/309 (61.17%), Postives = 236/309 (76.38%), Query Frame = 1
Query:    1 VCSARELIAPARAKSGIRSLKSAAKTLAEQLNKTRSDSQSALARMEKWRERKEALPEYEKQLANKEKAWFEREGPTNDQALRRTRALLPVGVTGLTVAQLEQRAIEAGSLYPRELAVRLKENRLLHWIVTHRDDIARSNFLRGDHAHFFTNLDQYDLVELRAVMACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGETVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQRRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRARDEAKMEVDR 927
            V SAREL+AP +A SG+R +++A K +AE L+KTR D Q+AL +ME WRERKEALPE+ K +A +EKAWF+RE   N QALRR R+L+PVGVTGLT+++LEQ+AI+AGSLYPREL++RLK                                  YDLVE+RA++ACLP KFEVD DGRKAAWRA F+QR +GL+AQERG+TVSGGWDPE+ ARRQV+LP+L+A QARR+EYFYPTAAE++ +V+KL+ERQRRLE K+  LA+V+D LLPEA+ EY  VLED+RHP N+   KPEDLRRAR+EAK EV R
Sbjct:  500 VGSARELVAPTQAASGLRGMEAAVKAMAETLSKTRRDCQAALEKMELWRERKEALPEHVKHVAGEEKAWFDREAGANAQALRRMRSLMPVGVTGLTLSELEQQAIDAGSLYPRELSLRLK----------------------------------YDLVEMRAILACLPDKFEVDDDGRKAAWRAEFVQRAKGLIAQERGDTVSGGWDPEISARRQVRLPELSAGQARREEYFYPTAAEVQARVDKLRERQRRLEVKRVDLAKVRDDLLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTR 774          
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Match: A0A6H5KBD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD8_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 8.000e-70
Identity = 124/146 (84.93%), Postives = 133/146 (91.10%), Query Frame = 1
Query:  490 MACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGETVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQRRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRARDEAKMEVDR 927
            MACLPAKFEVDADGRKA WR  FLQR Q LVAQERG+TV GGWDPE+ ARR+V+LP+LT EQ RRKEYFYPTAAE+E KV+KLQERQRRLE KQAKLA VKD+LLPEAKEEYANVLEDTRHPANKEAF+PEDLRRARDEAK EVDR
Sbjct:    1 MACLPAKFEVDADGRKATWRELFLQRAQSLVAQERGDTVRGGWDPEIGARREVRLPELTPEQTRRKEYFYPTAAEVEDKVQKLQERQRRLEDKQAKLAHVKDELLPEAKEEYANVLEDTRHPANKEAFRPEDLRRARDEAKSEVDR 146          
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Match: A0A662XB53_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XB53_9STRA)

HSP 1 Score: 218 bits (556), Expect = 8.550e-61
Identity = 128/281 (45.55%), Postives = 174/281 (61.92%), Query Frame = 1
Query:   82 AEQLNKTRSDSQSALARMEKWRERKEALPEYEKQLANKEKAWFEREGPTNDQALRRTRALLPVGVTGLTVAQLEQRA--IEAGSLYPRELAVRLKENRLLHWIVTHRDDIARSNFLRGDHAHFFTNLDQYDLVELRAVMACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGETVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQRRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRARDEAKME 918
            A  L +T S+ + A+  +E W+ R++   E+  ++  +E AW  R+  TND +L   RAL+P  +  L+V  L  RA   EAG LY  ELA  LK NR LHW+VTH DDIARSNFL  D A FF +   YD+ ELRA+   LP  F  D DGRK AWRAAF++ V+ L AQ++ +T+  GWDP  +ARR VQLP+LTA Q     + YP+  E+E K+ K Q +Q RLE K+ +L Q++D+L+P+AK EY  V ED R+   +  F    L   RD+AK +
Sbjct:  353 ARDLKRTESEMERAMRDVEIWKTRRDQAKEFPDEMRKRETAWQLRQRETNDTSLAVLRALIPSDIADLSVESLITRARETEAGVLYTYELATYLKTNRFLHWLVTHEDDIARSNFLAVDSAPFFLDFTGYDIQELRALARVLPESFAFDKDGRKRAWRAAFMEHVRLLTAQQQRQTIKAGWDPVRRARRDVQLPELTARQQLNPVFCYPSDVEIEAKLVKFQRQQARLEAKRLRLVQLEDELVPQAKAEYVAVAEDARNEELQRVFGKSTLISLRDDAKQQ 633          
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Match: A0A662Y0P3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0P3_9STRA)

HSP 1 Score: 217 bits (552), Expect = 3.360e-60
Identity = 127/281 (45.20%), Postives = 174/281 (61.92%), Query Frame = 1
Query:   82 AEQLNKTRSDSQSALARMEKWRERKEALPEYEKQLANKEKAWFEREGPTNDQALRRTRALLPVGVTGLTVAQLEQRA--IEAGSLYPRELAVRLKENRLLHWIVTHRDDIARSNFLRGDHAHFFTNLDQYDLVELRAVMACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGETVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQRRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRARDEAKME 918
            A  L +T S+ + A+  +E W+ R++   E+  ++  +E AW  R+   ND +L   RAL+P  +  L+V  L  RA   EAG LY  ELA  LK NR LHW+VTH DDIARSNFL  D A FF +   YD+ ELRA+   LP  F  D DGRK AWRAAF++ V+ L AQ++ +T+  GWDP  +ARR VQLP+LTA Q     + YP+  E+E K+ K Q +Q RLE K+ +L +++D+L+P+AK EY  V ED R+   + AF    L   RD+AK +
Sbjct:  373 ARDLKRTESEMERAMRDVEIWKTRRDQAKEFPDEMRKREAAWQLRQREANDASLEVLRALIPSDIADLSVESLITRARETEAGVLYTYELATYLKTNRFLHWLVTHEDDIARSNFLAVDSAPFFLDFTGYDIQELRALARVLPESFAFDKDGRKRAWRAAFMEHVRLLTAQQQRQTIKAGWDPARRARRDVQLPELTARQQLNPIFCYPSDVEIEAKLVKFQRQQARLEAKRLRLVKLEDELVPQAKAEYVAVAEDARNEELQRAFGKNTLISLRDDAKQQ 653          
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Match: G4ZYD9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZYD9_PHYSP)

HSP 1 Score: 198 bits (504), Expect = 4.240e-54
Identity = 114/279 (40.86%), Postives = 170/279 (60.93%), Query Frame = 1
Query:   82 AEQLNKTRSDSQSALARMEKWRERKEALPEYEKQLANKEKAWFEREGPTNDQALRRTRALLPVGVTGLTVAQLEQRAIEAGSLYPRELAVRLKENRLLHWIVTHRDDIARSNFLRGDHAHFFTNLDQYDLVELRAVMACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGETVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQRRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRARDEAKME 918
            A  L +T ++ +  +  +E W+ R+E   E+  ++  +E AW  ++   N++ L   R  +P+ +  L+V  L  RA E G LY  +LA  LK NR LHW+VTH DDIAR+NFL  + A FF +   YD+ ELRA+   LP  F  D D RK AWRA+F++ V+ L AQ++ ET+  GWDP   ARR VQLP+LTA Q     + YPT AE++ +++K + ++ RLE+K+A+L  + ++L+P+AK EY  V ED R+     +F    L   R+EAK +
Sbjct:  341 AHDLKRTETELERTMRDVEIWKTRREQAKEFADEMRKREAAWQAKQREKNEECLALMRTYVPIDIADLSVEALIARAQEGGVLYTYDLAAYLKTNRFLHWLVTHEDDIARANFLAIESAPFFMDFATYDINELRAMARVLPDTFAFDKDCRKNAWRASFIEHVRQLAAQQQHETIKAGWDPAKCARRDVQLPELTARQQLNPIFCYPTDAEIDARLDKFERQRIRLESKRARLKTLDEELIPQAKAEYVAVAEDARNEDLLRSFGKATLIALREEAKQQ 619          
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Match: A0A6A3YVC2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YVC2_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.230e-52
Identity = 114/279 (40.86%), Postives = 167/279 (59.86%), Query Frame = 1
Query:   82 AEQLNKTRSDSQSALARMEKWRERKEALPEYEKQLANKEKAWFEREGPTNDQALRRTRALLPVGVTGLTVAQLEQRAIEAGSLYPRELAVRLKENRLLHWIVTHRDDIARSNFLRGDHAHFFTNLDQYDLVELRAVMACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGETVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQRRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRARDEAKME 918
            A  L +T +D +  +  +E W+ R+E   E+  ++   E AW  R+   N++     R  +PV +  L+V  L  RA E G LY  +LA  LK NR LHW+VTH DDIAR+NFL  + A FF +   YD+ ELRA+   LP  F  D D RK AWRA+F++ V+ L AQ++ ET+  GWDP  +ARR VQLP+LTA Q     + YPT AE++ +++K + ++ RLE K+A+L  + ++ +P+AK EY  V  D R+   + +F    L   R+EAK +
Sbjct:  589 AHDLKRTETDLERTMRDVEIWKTRREQAKEFADEMRKLEAAWQARQREKNEECGALMRTYIPVDIADLSVEALIARAHEGGILYTYDLAAYLKTNRFLHWLVTHEDDIARANFLAIESAPFFMDFATYDIHELRALARVLPESFAFDKDCRKNAWRASFIEHVRQLAAQQQHETIKAGWDPAKRARRDVQLPELTARQQLNPIFCYPTDAEIDARLDKFERQRIRLEAKRARLKTLDEEHVPQAKAEYVAVAADARNEDLQRSFGKATLIALREEAKQQ 867          
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Match: A0A225W464_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W464_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.490e-52
Identity = 113/285 (39.65%), Postives = 168/285 (58.95%), Query Frame = 1
Query:   82 AEQLNKTRSDSQSALARMEKWRERKEALPEYEKQLANKEKAWFEREGPTNDQALRRTRALLPVGVTGLTVAQLEQRAIE------AGSLYPRELAVRLKENRLLHWIVTHRDDIARSNFLRGDHAHFFTNLDQYDLVELRAVMACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGETVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQRRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRARDEAKME 918
            A  L  T ++ +  +  +E W+ R+E   EY  ++  +E AW  ++   N++ L   R  +P+ +T L+V  L  RA        +G LY  +LA  LK NR  HWIVTH DDI RSNFL  + A FF +   YD+ ELRA+   LP  F  D DGRK AWR +F+  V+ L AQE+ ET+  GWDP  +ARR VQLP+LTA Q     + YPT AE++ +++K + ++ R+E K+ +L ++ D+L+P+AK EY  V +D R+   + +F    L   R++AK +
Sbjct:  332 AHDLKYTEAELERTMREVEIWKTRREQAKEYADEMRKREAAWQAKQREKNEECLALMRTYIPIDITDLSVEGLITRAQAGTNGPGSGVLYTYDLAAYLKSNRFFHWIVTHGDDITRSNFLAIESASFFMDFVNYDIHELRALARVLPDSFAFDKDGRKNAWRTSFIDHVRQLAAQEQHETILAGWDPVKRARRDVQLPELTARQQLNPIFCYPTDAEIDARLDKFERQRARIEAKRVRLKELDDELIPQAKAEYVAVADDARNEDLQRSFGKSTLIALREDAKRQ 616          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19798.5908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIN4_ECTSI3.400e-14578.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FT01_ECTSI1.310e-12969.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTS2_ECTSI6.760e-12566.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMC3_ECTSI6.860e-10561.17Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KBD8_9PHAE8.000e-7084.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A662XB53_9STRA8.550e-6145.55Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662Y0P3_9STRA3.360e-6045.20Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
G4ZYD9_PHYSP4.240e-5440.86Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A6A3YVC2_9STRA2.230e-5240.86Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A225W464_9STRA2.490e-5239.65Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19798contigL-elsbetiae_contig19798:5..2641 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score465.7
Seed ortholog evalue1.7e-128
Seed eggNOG ortholog2880.D7FIN4
Hectar predicted targeting categoryother localisation
EggNOG OGs2C7IG@1,2QWI0@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size930
Cds size930
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815819.2172923-CDS-L-elsbetiae_contig19798:4..1081622815819.2172923-CDS-L-elsbetiae_contig19798:4..108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 5..108 +
1691683123.4251063-CDS-L-elsbetiae_contig19798:4..1081691683123.4251063-CDS-L-elsbetiae_contig19798:4..108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 5..108 +
1622815819.2295578-CDS-L-elsbetiae_contig19798:404..4801622815819.2295578-CDS-L-elsbetiae_contig19798:404..480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 405..480 +
1691683123.4346006-CDS-L-elsbetiae_contig19798:404..4801691683123.4346006-CDS-L-elsbetiae_contig19798:404..480Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 405..480 +
1622815819.2399507-CDS-L-elsbetiae_contig19798:806..9861622815819.2399507-CDS-L-elsbetiae_contig19798:806..986Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 807..986 +
1691683123.4425213-CDS-L-elsbetiae_contig19798:806..9861691683123.4425213-CDS-L-elsbetiae_contig19798:806..986Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 807..986 +
1622815819.250647-CDS-L-elsbetiae_contig19798:1350..14521622815819.250647-CDS-L-elsbetiae_contig19798:1350..1452Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 1351..1452 +
1691683123.4510763-CDS-L-elsbetiae_contig19798:1350..14521691683123.4510763-CDS-L-elsbetiae_contig19798:1350..1452Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 1351..1452 +
1622815819.2617579-CDS-L-elsbetiae_contig19798:1863..19891622815819.2617579-CDS-L-elsbetiae_contig19798:1863..1989Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 1864..1989 +
1691683123.4605286-CDS-L-elsbetiae_contig19798:1863..19891691683123.4605286-CDS-L-elsbetiae_contig19798:1863..1989Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 1864..1989 +
1622815819.2735062-CDS-L-elsbetiae_contig19798:2148..23461622815819.2735062-CDS-L-elsbetiae_contig19798:2148..2346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 2149..2346 +
1691683123.4708068-CDS-L-elsbetiae_contig19798:2148..23461691683123.4708068-CDS-L-elsbetiae_contig19798:2148..2346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 2149..2346 +
1622815819.2841787-CDS-L-elsbetiae_contig19798:2497..26411622815819.2841787-CDS-L-elsbetiae_contig19798:2497..2641Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 2498..2641 +
1691683123.4809976-CDS-L-elsbetiae_contig19798:2497..26411691683123.4809976-CDS-L-elsbetiae_contig19798:2497..2641Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19798 2498..2641 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19798.5908.1prot_L-elsbetiae_contig19798.5908.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig19798 5..2641 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig19798.5908.1

>prot_L-elsbetiae_contig19798.5908.1 ID=prot_L-elsbetiae_contig19798.5908.1|Name=mRNA_L-elsbetiae_contig19798.5908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=310bp
VCSARELIAPARAKSGIRSLKSAAKTLAEQLNKTRSDSQSALARMEKWRE
RKEALPEYEKQLANKEKAWFEREGPTNDQALRRTRALLPVGVTGLTVAQL
EQRAIEAGSLYPRELAVRLKENRLLHWIVTHRDDIARSNFLRGDHAHFFT
NLDQYDLVELRAVMACLPAKFEVDADGRKAAWRAAFLQRVQGLVAQERGE
TVSGGWDPELQARRQVQLPKLTAEQARRKEYFYPTAAELEQKVEKLQERQ
RRLETKQAKLAQVKDQLLPEAKEEYANVLEDTRHPANKEAFKPEDLRRAR
DEAKMEVDR*
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mRNA from alignment at L-elsbetiae_contig19798:5..2641+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19798.5908.1 ID=mRNA_L-elsbetiae_contig19798.5908.1|Name=mRNA_L-elsbetiae_contig19798.5908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2637bp|location=Sequence derived from alignment at L-elsbetiae_contig19798:5..2641+ (Laminarionema elsbetiae ELsaHSoW15)
GTGTGCTCTGCCAGGGAACTGATCGCACCTGCGCGGGCCAAGAGCGGTAT CCGCAGTCTCAAGAGTGCCGCCAAGACTCTGGCGGAACAACTCAACAAGA CCAGGTGAGGGCTCTAGCGAGGCAGCTCTTCCCACTTGGTCGGATGAGGG TCGACTGAATGCTCCAAGACAGGCAGCATCCATCATCGACCAAAGAGCGA TATTTCCCGCGTCGTGGTGTTGAGCTGAGCTGCCGACTTACTAGCTATGT CTCGTCCTGCCTCATTGTCTGCGTCTATCGCACGATCAAGGCATTTCGTG GGCATTATATGTGGCGGTTCCAGCCTCGCAAGTTGTTTGAGGAGTCAGAT ACATACCGAAACGTTCGCTAATTCATCTCATCGACATTGTTTGTTTGCAG GAGCGACTCTCAGTCTGCCCTGGCACGCATGGAAAAGTGGAGAGAGCGCA AGGAGGCTCTTCCAGAGTACGAGAAGGTGGGGTAGTACTGGAGTGGCCCA CCAGGTGTTGTGCTTTGTTGTTCGGGGGGTTAAGGCGAAGCGACGGCGGG GATAGCTTCGATCTTGACAATTTCGTCGTCGTTGTCCTAACGGGAACGTT ATGGTGTGTGTGGTGTTCTGTATGTCGTGAAGAGGTCGACACAATTTTGT TCTCTTTTCCTCTGCCCCCTCTGCAATCTACCCCCTCTTCCGTGACCCCG TAATCGCACTCCCTTTCGATGCTCTGAGGGAGTACATCGGGACCCACGCC TTTCACTTTGACTGATTGTGTCGATTTTCCATCAAAACTTGGACTACGGC AGCAACTCGCCAACAAAGAGAAGGCGTGGTTCGAAAGAGAGGGACCCACG AACGATCAGGCGCTGCGGCGCACCCGCGCTCTCCTGCCGGTGGGCGTGAC CGGCCTCACTGTGGCTCAGCTGGAGCAGCGGGCGATCGAGGCGGGCTCGC TGTACCCGCGAGAGCTGGCCGTGCGACTCAAGGTAGCAGCCGGGCTGTGT TGCTAAAATATGCTTACTTTGTTTTGAAGCGGGGGGGTGGGGGAGAGGTA CAGCACTGCGTTGCTTGCCGAAGCTGCTCGGTGGAGGGAGCTTGCGTCCC TGGAGTCGTACGTGATGCTTGGCTTGCCATTTGTGCTTGCGCACCGTACG CCATCGATAGCTTGTACTGCTTCCGACCAACTCCTCTGAACTCTTACCGC AACATTCGATGATGATGGTGATTTAGGAATTATCATGTCACCCTTCTCCA GTACTGGAAGTTTATCCATGGCCATCCTGATCGATCACTTCTATTGCTGC GTGCATCGCCAATCGTATTGCGCCGTCCGTATTTCGAACTTCGCAGGAGA ATCGCCTCCTCCACTGGATCGTGACCCACCGGGATGATATCGCCAGGTCG AACTTCCTTCGGGGGGACCATGCGCACTTCTTTACCAATCTAGACCAGGT AATACATACGGAGAGCATGTTGGTGATAGACCGTCACAGCTGAGGGCTTT TGGCAACATTTCGTCGCTAATCGGCTTCGGAAGTACAGCTTTTCGCGCAT TGCAAATCGTACCAGTAGTTAACAACAACCGTCGTTCACCCGAGTGTCGG TGCACTGATTTCGACAGCGGTCATGGAAAACCGACCGCAAACGACACTTT TTTTGCGGTGAGATGGCATATGTTGTACCGTGATACTTCTCTATTGCGCA CCTTCTCCTGCTCCTGCCTTTGTAGCACGCCATATCGTGTTGCACGGACT GTTGTATTGTTGCGATGCCTTTAATTCCTAAGCTTGGTTCACCTCGGCCC TTTGCCATTCTGCCGCCGCATGCAATGCCGTGCGCATTTTTCTTTTGTTT CTCACGCAGTACGACCTGGTGGAGTTGAGAGCGGTCATGGCTTGTCTTCC TGCCAAGTTTGAGGTAGACGCCGACGGACGCAAGGCGGCCTGGAGGGCTG CATTCCTGCAGCGGGTGCAGGGTCTCGTGGCCCAGGTGGGTCATATGACA GCAGTATGAGGGTTTGAAGGAGATGTGACGAGTGTTCGTGACGACGACGA CATGCCATAGGCAGGCCTCCAGGGTGTGCTCTGAGTCATCACCACGCGTG TCTCATCCGGGAGTGCGTCGGCCCCGCATTGTTCTTGTTTGCAGGAGAGG GGCGAAACTGTGAGCGGCGGGTGGGACCCCGAGCTCCAAGCCAGGCGCCA GGTGCAGCTGCCAAAGCTGACCGCCGAGCAGGCGAGGAGGAAGGAGTACT TCTACCCGACGGCGGCGGAGTTGGAGCAGAAGGTGGAGAAGCTCCAAGAG CGGCAACGCAGGCTGGAGACGAAGCAGGCCAAGCTCGCACAGGTACTGAG TCAGTCTCAGGTTGGTTGTATTTTGTGTGAGTAGGAGTCTTCGTTTTGTG CACCACGTGCATGTCGTTTGTGCCCTGAAGCCCCGCCGATGACACCGTAC TGCACTCAACATCTGGACGTACATATGCATATCGATGGATCAGGTCAAGG ACCAGCTGCTGCCCGAGGCGAAGGAGGAGTACGCCAACGTCCTGGAAGAC ACCCGACACCCGGCCAACAAGGAGGCGTTCAAGCCGGAAGACCTCAGGAG AGCGAGAGACGAGGCCAAGATGGAGGTGGACAGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig19798:5..2641+

>mRNA_L-elsbetiae_contig19798.5908.1 ID=mRNA_L-elsbetiae_contig19798.5908.1|Name=mRNA_L-elsbetiae_contig19798.5908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1860bp|location=Sequence derived from alignment at L-elsbetiae_contig19798:5..2641+ (Laminarionema elsbetiae ELsaHSoW15)
GTGTGCTCTGCCAGGGAACTGATCGCACCTGCGCGGGCCAAGAGCGGTAT
CCGCAGTCTCAAGAGTGCCGCCAAGACTCTGGCGGAACAACTCAACAAGA
CCAGGTGTGCTCTGCCAGGGAACTGATCGCACCTGCGCGGGCCAAGAGCG
GTATCCGCAGTCTCAAGAGTGCCGCCAAGACTCTGGCGGAACAACTCAAC
AAGACCAGGAGCGACTCTCAGTCTGCCCTGGCACGCATGGAAAAGTGGAG
AGAGCGCAAGGAGGCTCTTCCAGAGTACGAGAAGGAGCGACTCTCAGTCT
GCCCTGGCACGCATGGAAAAGTGGAGAGAGCGCAAGGAGGCTCTTCCAGA
GTACGAGAAGCAACTCGCCAACAAAGAGAAGGCGTGGTTCGAAAGAGAGG
GACCCACGAACGATCAGGCGCTGCGGCGCACCCGCGCTCTCCTGCCGGTG
GGCGTGACCGGCCTCACTGTGGCTCAGCTGGAGCAGCGGGCGATCGAGGC
GGGCTCGCTGTACCCGCGAGAGCTGGCCGTGCGACTCAAGCAACTCGCCA
ACAAAGAGAAGGCGTGGTTCGAAAGAGAGGGACCCACGAACGATCAGGCG
CTGCGGCGCACCCGCGCTCTCCTGCCGGTGGGCGTGACCGGCCTCACTGT
GGCTCAGCTGGAGCAGCGGGCGATCGAGGCGGGCTCGCTGTACCCGCGAG
AGCTGGCCGTGCGACTCAAGGAGAATCGCCTCCTCCACTGGATCGTGACC
CACCGGGATGATATCGCCAGGTCGAACTTCCTTCGGGGGGACCATGCGCA
CTTCTTTACCAATCTAGACCAGGAGAATCGCCTCCTCCACTGGATCGTGA
CCCACCGGGATGATATCGCCAGGTCGAACTTCCTTCGGGGGGACCATGCG
CACTTCTTTACCAATCTAGACCAGTACGACCTGGTGGAGTTGAGAGCGGT
CATGGCTTGTCTTCCTGCCAAGTTTGAGGTAGACGCCGACGGACGCAAGG
CGGCCTGGAGGGCTGCATTCCTGCAGCGGGTGCAGGGTCTCGTGGCCCAG
TACGACCTGGTGGAGTTGAGAGCGGTCATGGCTTGTCTTCCTGCCAAGTT
TGAGGTAGACGCCGACGGACGCAAGGCGGCCTGGAGGGCTGCATTCCTGC
AGCGGGTGCAGGGTCTCGTGGCCCAGGAGAGGGGCGAAACTGTGAGCGGC
GGGTGGGACCCCGAGCTCCAAGCCAGGCGCCAGGTGCAGCTGCCAAAGCT
GACCGCCGAGCAGGCGAGGAGGAAGGAGTACTTCTACCCGACGGCGGCGG
AGTTGGAGCAGAAGGTGGAGAAGCTCCAAGAGCGGCAACGCAGGCTGGAG
ACGAAGCAGGCCAAGCTCGCACAGGAGAGGGGCGAAACTGTGAGCGGCGG
GTGGGACCCCGAGCTCCAAGCCAGGCGCCAGGTGCAGCTGCCAAAGCTGA
CCGCCGAGCAGGCGAGGAGGAAGGAGTACTTCTACCCGACGGCGGCGGAG
TTGGAGCAGAAGGTGGAGAAGCTCCAAGAGCGGCAACGCAGGCTGGAGAC
GAAGCAGGCCAAGCTCGCACAGGTCAAGGACCAGCTGCTGCCCGAGGCGA
AGGAGGAGTACGCCAACGTCCTGGAAGACACCCGACACCCGGCCAACAAG
GAGGCGTTCAAGCCGGAAGACCTCAGGAGAGCGAGAGACGAGGCCAAGAT
GGAGGTGGACAGGTGAGTCAAGGACCAGCTGCTGCCCGAGGCGAAGGAGG
AGTACGCCAACGTCCTGGAAGACACCCGACACCCGGCCAACAAGGAGGCG
TTCAAGCCGGAAGACCTCAGGAGAGCGAGAGACGAGGCCAAGATGGAGGT
GGACAGGTGA
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