mRNA_L-elsbetiae_contig19778.5903.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Match: A0A6H5K079_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K079_9PHAE) HSP 1 Score: 201 bits (510), Expect = 1.880e-57 Identity = 107/166 (64.46%), Postives = 109/166 (65.66%), Query Frame = 1 Query: 1 EYDRMFDRYELVERPNDHTSVRWTSYCAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVRVGWA----HEMERE---------------------------------------------ELRPSSEFTMYAHTDLGGVLPASVINKLCKK 351 EYDRMFDRYELVERPNDHTSVRWT Y AIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMV G+ E R+ ELRPSSEFTMYAHTDLGGVLPASVINKLCKK Sbjct: 470 EYDRMFDRYELVERPNDHTSVRWTCYQAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVTCGYVICPLGESRRQRRASKSIKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGSRSMELRPSSEFTMYAHTDLGGVLPASVINKLCKK 635
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Match: D7FSJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ0_ECTSI) HSP 1 Score: 200 bits (508), Expect = 3.220e-57 Identity = 106/166 (63.86%), Postives = 109/166 (65.66%), Query Frame = 1 Query: 1 EYDRMFDRYELVERPNDHTSVRWTSYCAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVRVGWA----HEMERE---------------------------------------------ELRPSSEFTMYAHTDLGGVLPASVINKLCKK 351 EYDRMFDRYE+VERPNDHTSVRWT Y AIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMV G+ E R+ ELRPSSEFTMYAHTDLGGVLPASVINKLCKK Sbjct: 140 EYDRMFDRYEMVERPNDHTSVRWTCYQAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVTCGYVICPLGESRRQRRASKSIKPSTPXXXXXXXXXXXXXXXXXXXXXXXXXXGAGSRSMELRPSSEFTMYAHTDLGGVLPASVINKLCKK 305
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Match: A0A418AMN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AMN5_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.920e-17 Identity = 48/104 (46.15%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 31 LVERPNDHTSVRWTSYCAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVRVGWAHEMEREELRPSSEFTMYAHTDLGGVLPASVINKL 342 L+ PN TSVR + ++PT RDFV+ ST E D +VIATRS++H P T TFVRG + G+ + P+ TM AH DLGG+LPA VIN L Sbjct: 19 LMTLPNSTTSVRHITAKPVFPTAARDFVVMSTMEVKPDDVVVIATRSMDHATAPATSTFVRGHINISGYILDPVDLGPEPACHVTMMAHMDLGGMLPAVVINLL 122
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Match: A0A7S2V6S8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6S8_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.890e-17 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 1 EYDRMFDRYELVERPNDHTSVRWTSYCAIWPTRPRDFVIRSTWEEFA---DGTIVIATRSVEHEDYPETPTFVRGKMVRVGWA--HEMEREELRPSSEFTMYAHTDLGGVLPASVINKL 342 EYD +FD+ + V++P+ H+ VR Y AIWPT PRDF+ +TW+ +G VIA++SV+ P + RG + G++ + P + M AH DLGG +PAS+IN L Sbjct: 84 EYDSLFDKIQDVDKPDGHSVVRHLKYKAIWPTSPRDFITYTTWKRVGAKREGW-VIASKSVDLTKGPSSRKHTRGNVYSFGYSLMPTTMPDTGEPGTVLRMTAHMDLGGSMPASIINFL 201
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Match: A0A024TBS2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBS2_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 9.490e-17 Identity = 47/104 (45.19%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 31 LVERPNDHTSVRWTSYCAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVRVGWAHEMEREELRPSSEFTMYAHTDLGGVLPASVINKL 342 L+ PN TSVR + ++PT RDFV+ ST E D +VIATRS++H P T FVRG + G+ + P+ TM AH DLGG+LPA VIN L Sbjct: 366 LMALPNSTTSVRHITAKPVFPTAARDFVVMSTMEVKPDDVVVIATRSMDHATAPATSNFVRGHINISGYILDPVDLGPEPACHVTMMAHMDLGGMLPAVVINLL 469
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Match: A0A067C6Z9_SAPPC (START domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C6Z9_SAPPC) HSP 1 Score: 78.2 bits (191), Expect = 2.620e-15 Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 4 YDRMFDRYELVERPNDHTSVRWTSYCAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVRVGWAHEMEREELRPSSEFTMYAHTDLGGVLPASVINKL 342 +D M D ++E + TS+R+ ++PT RDF++ ++ + DG+IVI T+SVEH+ P FVR G+ + R S T+ H DLGG +PA+VIN L Sbjct: 97 FDEMTDNCRVIEALKESTSIRYVQAKPVFPTTARDFLVVTSQQHLDDGSIVIGTKSVEHDSVPVDKHFVRAHTHVSGY---IVRPLTPTSCSVTLIVHMDLGGYMPAAVINLL 206
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Match: A0A6G0WE54_9STRA (START domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WE54_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.740e-15 Identity = 47/117 (40.17%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 4 YDRMFDRYELVERPNDHTSVRWTSYCAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVRVGWAHEMEREELRPSS----EFTMYAHTDLGGVLPASVINKL 342 ++ M + ++ + TS+R A++PT RDFV+ T E +D IVIATRS+ H+D PE P FVR M+ G+ +RP+ + TM AH DLGG PA VIN L Sbjct: 89 FEEMTEYCHVIANVDVATSIRHVKAKAVFPTTARDFVV-VTSESRSDKAIVIATRSILHDDMPEDPHFVRATMLISGYV-------IRPTGKHQCQVTMVAHVDLGGHFPAFVINLL 197
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Match: A0A1V9YKF4_9STRA (START domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKF4_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.200e-14 Identity = 45/117 (38.46%), Postives = 64/117 (54.70%), Query Frame = 1 Query: 4 YDRMFDRYELVERPNDHTSVRWTSYCAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVRVGWAHEMEREELRPSS----EFTMYAHTDLGGVLPASVINKL 342 +D M D +VE N S+R+ ++PT RDF++ T E+ TIVI T+S++H+D PE +FVR G+ LRP S + T+ H DLGG +PA+VIN L Sbjct: 85 FDEMTDNCRVVEVLNPTASIRYVQAKPVFPTTARDFLV-VTAEQRVGDTIVIGTKSIKHDDVPEDGSFVRAHTHVSGYL-------LRPVSSTECQVTLIVHMDLGGYMPAAVINLL 193
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Match: T0RYD8_SAPDV (START domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RYD8_SAPDV) HSP 1 Score: 71.6 bits (174), Expect = 1.400e-13 Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 1 Query: 4 YDRMFDRYELVE--RPNDHTSVRWTSYCAIWPTRPRDFVIRSTWEEFADGTIVIATRSVEHEDYPETPTFVRGKMVRVGWAHEMEREELRPSSEFTMYAHTDLGGVLPASVINKL 342 +D M D ++E P + ++R+ ++PT RDF++ ++ + DG+IVI T+SVEH+ P FVR G+ + R S T+ H DLGG +PA VIN L Sbjct: 4 FDEMTDNCRIIEALNPAETKTIRYVQAKPVFPTTARDFLVVTSEQRLDDGSIVIGTKSVEHDSVPVDKHFVRAHTHVSGY---IVRPLTPTSCSVTLIVHMDLGGYMPAYVINLL 115
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Match: A0A6G0WBH1_9STRA (START domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBH1_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.650e-13 Identity = 43/97 (44.33%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 55 TSVRWTSYCAIWPTRPRDFVIRSTWEEFADGT-IVIATRSVEHEDYPETPTFVRGKMVRVGWAHEMEREELRPSSEFTMYAHTDLGGVLPASVINKL 342 TSVR I+PT+ R+FV+ S+ + DG+ IVIATRS+ HED PE R M+ G+ + + E T+ AH DLGG+LPA+VIN L Sbjct: 174 TSVRHVKAKPIFPTQVREFVVISSEHKAEDGSMIVIATRSIHHEDVPEVSHLTRATMILSGYIIRAVDDH---TCELTVIAHIDLGGLLPATVINLL 267 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19778.5903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19778.5903.1 >prot_L-elsbetiae_contig19778.5903.1 ID=prot_L-elsbetiae_contig19778.5903.1|Name=mRNA_L-elsbetiae_contig19778.5903.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp MFDRYELVERPNDHTSVRWTSYCAIWPTRPRDFVIRSTWEEFADGTIVIAback to top mRNA from alignment at L-elsbetiae_contig19778:1263..2468- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19778.5903.1 ID=mRNA_L-elsbetiae_contig19778.5903.1|Name=mRNA_L-elsbetiae_contig19778.5903.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1206bp|location=Sequence derived from alignment at L-elsbetiae_contig19778:1263..2468- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19778:1263..2468- >mRNA_L-elsbetiae_contig19778.5903.1 ID=mRNA_L-elsbetiae_contig19778.5903.1|Name=mRNA_L-elsbetiae_contig19778.5903.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=678bp|location=Sequence derived from alignment at L-elsbetiae_contig19778:1263..2468- (Laminarionema elsbetiae ELsaHSoW15)back to top |