mRNA_L-elsbetiae_contig19749.5897.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Match: D7FZS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS4_ECTSI) HSP 1 Score: 188 bits (477), Expect = 1.350e-57 Identity = 95/151 (62.91%), Postives = 116/151 (76.82%), Query Frame = 1 Query: 1 RHWTRRKAELMETYRLAFDTLQTVRQSNSYGSVVEDPTTMLDATHLAHTTRVLHTVKHFVHLEIEEGVAKMDHSRAAAKLAGVESKTARRWVREFCKDRSFVLPKRQYNKRAAQSYIDDEDVRDDLKEFIDRRLYRRKEDETRLRIADVQK 453 +HW+RRKA+LMETYR A T Q V + N+ GSVVEDP MLD H+ TTRV+ VKHF+ LE+++GVAKM+HSR AK+ V+ T RRWV++ CK S V+ KRQYNKR A YIDDED+R+ L+E+IDRRLYRRK DE RLRIADVQK Sbjct: 15 KHWSRRKADLMETYRNALGTPQKVEEMNNNGSVVEDPKIMLDERHMVQTTRVVRAVKHFLQLEVQDGVAKMEHSREVAKVYEVDPSTVRRWVKKLCKGGSVVIRKRQYNKREAHPYIDDEDIRNGLREYIDRRLYRRKRDEPRLRIADVQK 165
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Match: A0A6H5JH07_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH07_9PHAE) HSP 1 Score: 169 bits (427), Expect = 8.220e-46 Identity = 91/151 (60.26%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 1 RHWTRRKAELMETYRLAFDTLQTVRQSNSYGSVVEDPTTMLDATHLAHTTRVLHTVKHFVHLEIEEGVAKMDHSRAAAKLAGVESKTARRWVREFCKDRSFVLPKRQYNKRAAQSYIDDEDVRDDLKEFIDRRLYRRKEDETRLRIADVQK 453 +HW+RRKAELMETYR A D LQ + N+YGSVVED T LD H+ HTTRV+ VKHF+ LE +++ V+ T RRWV+EFC SFV+ KRQYNKR A SYIDDEDVR L+E+IDRRLYRRK+DE RLRIADVQK Sbjct: 304 KHWSRRKAELMETYRNAHDKLQKAEEMNNYGSVVEDSKTQLDEAHVVHTTRVVRAVKHFLQLE------------EVGEVSEVDPTTVRRWVKEFCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKDEPRLRIADVQK 442
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Match: A0A6H5JM40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM40_9PHAE) HSP 1 Score: 165 bits (418), Expect = 1.270e-44 Identity = 82/123 (66.67%), Postives = 98/123 (79.67%), Query Frame = 1 Query: 1 RHWTRRKAELMETYRLAFDTLQTVRQSNSYGSVVEDPTTMLDATHLAHTTRVLHTVKHFVHLEIEEGVAKMDHSRAAAKLAGVESKTARRWVREFCKDRSFVLPKRQYNKRAAQSYIDDEDVR 369 +HWTRRKAELM+TYR A+D LQ S SY SVV DP TMLD + L HTT+V+H VKHFVHLEI+EGVAK DHSRAA ++A V+SKT RRWV+EF + +FV+PKRQYNKR S+I+DED R Sbjct: 303 KHWTRRKAELMQTYRDAYDKLQKAEHSRSYDSVVADPKTMLDRSQLVHTTKVIHAVKHFVHLEIQEGVAKKDHSRAAVEVAKVQSKTVRRWVKEFREGGAFVVPKRQYNKREPHSFIEDEDKR 425
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Match: A0A6H5K4P4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P4_9PHAE) HSP 1 Score: 154 bits (389), Expect = 5.530e-42 Identity = 75/135 (55.56%), Postives = 101/135 (74.81%), Query Frame = 1 Query: 1 RHWTRRKAELMETYRLAFDTLQTVRQSNSYGSVVEDPTTMLDATHLAHTTRVLHTVKHFVHLEIEEGVAKMDHSRAAAKLAGVESKTARRWVREFCKDRSFVLPKRQYNKRAAQSYIDDEDVRDDLKEFIDRRLY 405 +H+TRRKA+LMETYR A+ L + S+ SVV+DP TMLD+T + HT RV++ VK F+ E++ GVAKM+HSR AA A VESK RRWV+EFC+D +F + KRQYNKR SYI DED+R L+E++D++L+ Sbjct: 186 KHYTRRKAQLMETYRKAYARLHQAEKGGSFDSVVDDPETMLDSTRMVHTCRVINAVKTFLFFELQHGVAKMEHSRTAANFAEVESKVVRRWVKEFCEDGTFRVRKRQYNKRQPHSYIHDEDIRQRLREYLDQKLF 320
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 156 bits (394), Expect = 2.970e-41 Identity = 80/124 (64.52%), Postives = 95/124 (76.61%), Query Frame = 1 Query: 82 NSYGSVVEDPTTMLDATHLAHTTRVLHTVKHFVHLEIEEGVAKMDHSRAAAKLAGVESKTARRWVREFCKDRSFVLPKRQYNKRAAQSYIDDEDVRDDLKEFIDRRLYRRKEDETRLRIADVQK 453 N+YGSVVED T L+ H+ HTTRV VKHF+ LEI +GV KM HSR +++ V+ T RRWV+EFC SFV+ KRQYNKR A SYIDDEDVR L+E+IDRRLYRRK++E RLRIADVQK Sbjct: 2 NNYGSVVEDSKTQLNEAHVVHTTRVARAVKHFLQLEIRDGVTKMAHSREVGEVSEVDPTTVRRWVKEFCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKNEPRLRIADVQK 125
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Match: A0A6H5KM05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM05_9PHAE) HSP 1 Score: 145 bits (366), Expect = 7.430e-39 Identity = 82/151 (54.30%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 1 RHWTRRKAELMETYRLAFDTLQTVRQSNSYGSVVEDPTTMLDATHLAHTTRVLHTVKHFVHLEIEEGVAKMDHSRAAAKLAGVESKTARRWVREFCKDRSFVLPKRQYNKRAAQSYIDDEDVRDDLKEFIDRRLYRRKEDETRLRIADVQK 453 +HWTRRKAELM+TYR A+D LQ VR I+EGVAKMDHSRAAA++A VESK RRWV+EFCK +FV+PKRQYNKR S+I+DED R+ L+ +IDR+LYRRK+DE RLRIADVQK Sbjct: 255 KHWTRRKAELMQTYRDAYDKLQKVR--------------------------------------IQEGVAKMDHSRAAAEVAKVESKAVRRWVKEFCKGGAFVVPKRQYNKREPHSFIEDEDKRNHLRGYIDRKLYRRKKDEPRLRIADVQK 367
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Match: A0A6H5K527_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K527_9PHAE) HSP 1 Score: 130 bits (327), Expect = 3.230e-32 Identity = 66/151 (43.71%), Postives = 96/151 (63.58%), Query Frame = 1 Query: 1 RHWTRRKAELMETYRLAFDTLQTVRQSNSYGSVVEDPTTMLDATHLAHTTRVLHTVKHFVHLEIEEGVAKMDHSRAAAKLAGVESKTARRWVREFCKDRSFVLPKRQYNKRAAQSYIDDEDVRDDLKEFIDRRLYRRKEDETRLRIADVQK 453 +H + RK EL+ +R A D + + N Y S+VE P TML RV+ V+ ++ +EI EGV K+ HSRA + GV ++T R+WV +FCKD FV+P R+Y KR YIDDED+R+ +E++D R+YRRK+ + R R+AD Q+ Sbjct: 409 KHCSERKEELVRIFRQALDKID--QAGNDYTSLVEKPDTMLARVRAVRVCRVIGAVRTYLTMEINEGVKKLAHSRAVGEAVGVHARTVRKWVTDFCKDGKFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQR 557
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Match: A0A6H5KDG4_9PHAE (Uncharacterized protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDG4_9PHAE) HSP 1 Score: 130 bits (327), Expect = 3.310e-32 Identity = 66/151 (43.71%), Postives = 96/151 (63.58%), Query Frame = 1 Query: 1 RHWTRRKAELMETYRLAFDTLQTVRQSNSYGSVVEDPTTMLDATHLAHTTRVLHTVKHFVHLEIEEGVAKMDHSRAAAKLAGVESKTARRWVREFCKDRSFVLPKRQYNKRAAQSYIDDEDVRDDLKEFIDRRLYRRKEDETRLRIADVQK 453 +H + RK EL+ +R A D + + N Y S+VE P TML RV+ V+ ++ +EI EGV K+ HSRA + GV ++T R+WV +FCKD FV+P R+Y KR YIDDED+R+ +E++D R+YRRK+ + R R+AD Q+ Sbjct: 404 KHCSERKEELVRIFRQALDKID--QAGNDYTSLVEKPDTMLARVRAVRVCRVIGAVRTYLTMEINEGVKKLAHSRAVGEAVGVHARTVRKWVTDFCKDGKFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQR 552
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Match: A0A6H5KE66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE66_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.120e-28 Identity = 59/89 (66.29%), Postives = 75/89 (84.27%), Query Frame = 1 Query: 187 EIEEGVAKMDHSRAAAKLAGVESKTARRWVREFCKDRSFVLPKRQYNKRAAQSYIDDEDVRDDLKEFIDRRLYRRKEDETRLRIADVQK 453 +I+EG AKM+HS+AAA++A VESK RRWV+EFCK +F +PKRQYNKR S+I+DED R+ L+E+IDR+LYRRK+DE RLRIADV K Sbjct: 81 KIQEGGAKMNHSQAAAEVAKVESKAVRRWVKEFCKGGAFFVPKRQYNKREPHSFIEDEDKRNHLREYIDRKLYRRKKDEPRLRIADVHK 169
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 118 bits (296), Expect = 4.890e-28 Identity = 70/151 (46.36%), Postives = 93/151 (61.59%), Query Frame = 1 Query: 1 RHWTRRKAELMETYRLAFDTLQTVRQSNSYGSVVEDPTTMLDATHLAHTTRVLHTVKHFVHLEIEEGVAKMDHSRAAAKLAGVESKTARRWVREFCKDRSFVLPKRQYNKRAAQSYIDDEDVRDDLKEFIDRRLYRRKEDETRLRIADVQK 453 R+ T R+ +L++T+ D + V N S+VE+ ML +A RV+ V+ + LEI GV KM HSRA + AGV +KT RRWV EFCKD FV+P R Y KR +YIDDED+RD +E+ID R+YRRK TR R+AD + Sbjct: 371 RNCTERQKKLIDTFCEGRDKIDKV--GNDLASLVENEERMLTPERIACVCRVISVVRAYFDLEIRYGVQKMVHSRAVGEGAGVHAKTVRRWVTEFCKDGKFVVPDRAYVKRQPFTYIDDEDIRDQCREYIDERIYRRKG--TRFRVADFHR 517 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19749.5897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19749.5897.1 >prot_L-elsbetiae_contig19749.5897.1 ID=prot_L-elsbetiae_contig19749.5897.1|Name=mRNA_L-elsbetiae_contig19749.5897.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp METYRLAFDTLQTVRQSNSYGSVVEDPTTMLDATHLAHTTRVLHTVKHFVback to top mRNA from alignment at L-elsbetiae_contig19749:1704..2710+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19749.5897.1 ID=mRNA_L-elsbetiae_contig19749.5897.1|Name=mRNA_L-elsbetiae_contig19749.5897.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1007bp|location=Sequence derived from alignment at L-elsbetiae_contig19749:1704..2710+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19749:1704..2710+ >mRNA_L-elsbetiae_contig19749.5897.1 ID=mRNA_L-elsbetiae_contig19749.5897.1|Name=mRNA_L-elsbetiae_contig19749.5897.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig19749:1704..2710+ (Laminarionema elsbetiae ELsaHSoW15)back to top |