mRNA_L-elsbetiae_contig19591.5835.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig19591.5835.1
Unique NamemRNA_L-elsbetiae_contig19591.5835.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Match: A0A388K4Z0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K4Z0_CHABU)

HSP 1 Score: 100 bits (249), Expect = 3.390e-19
Identity = 90/371 (24.26%), Postives = 161/371 (43.40%), Query Frame = 1
Query:    7 CGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLDKTKH-RLINPCPTRFATNVLSCMRTMKVKSALKLFAADERVAAYQ--RSATVPIRTVGREVVGELKQGDALEGEFWFELEFFVEMMWPVYDLLRTAD--GTVPCMFKFFNGMLKLPEKWNEVCKKQAAAANDLEGEGWKDESVLERRGEMKEMNEKRRKYVHAPMLSAAYALDPE------YIDRDVAEIDDGQILLDLHTMYERLLINHGDDSAAAIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYAQNMSPADWWKTYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERARKLVFVRANLRL 1086
            C AH   LLL+D+SKL W    +KR  T++K+++NHH+T ++++       L+ P   RF +  +   R +  K+ L      +  A +   R AT  +++    V   +++       +W EL+  V++M P+Y+LLR  D  GT P     ++ +++       +  +Q A             SV+E+  +       R K +  P+ + A+ +DP         DRD A + +  + L      +    +H +      +  +E    GP           K +K          + ++P+ WW TYG   +PDL  +A++       +  +ERNW+    V   R     PE   KLV++  N++L
Sbjct:  410 CAAHCCSLLLRDISKLDWVTGTVKRGHTIIKFIRNHHSTHSLMMSMDDSLALLRPTEVRFGSVYMMLERLVNRKAVLSDMVDRKNAARWTGIRWATAKLKSKADLVYFTMRRDG-----WWTELKKVVDVMEPLYNLLRRMDHDGTSPTNLVEYDDLIERKLAHVVLTDEQRA-------------SVMEKARD-------RVKMMRHPVHALAFLMDPRRRNPRWLYDRDSATVQNAMLYLQRQVGGDWKGPDHLEVLGDLHEFHKEPTPNGP---------RRKDKKMWEPDAKVDCEKLTPSKWWATYGG-DVPDLQAIAIKVMGMRSTATPAERNWASMDFVHSKRRNSFKPETLEKLVYIHWNMQL 745          
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Match: A0A388LAH1_CHABU (RNA-directed DNA polymerase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LAH1_CHABU)

HSP 1 Score: 98.2 bits (243), Expect = 2.280e-18
Identity = 106/394 (26.90%), Postives = 163/394 (41.37%), Query Frame = 1
Query:    7 CGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLD-KTKHRLINPCPTRFATNVLSCMRTMKVKSALKLFAADERVAAYQRSATVPIRTVGR-EVVGELKQGDALEGEFWFELEFFVEMMWPVYDLLRTAD--GTVPCMFKFFNGMLKLPEKWNEVCKKQAAAANDLEGEGWKDESVL--ERRGEMKEMNEKRRKYVHAPMLSAAYALDPE------YIDRDVAEIDDGQILLDLHTMYERLLINHGDDSAAAIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYAQNMSPADWWKTYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERARKLVFVRANLRL--QSKEFTKRLFIAWDPESVES 1146
            C AH   LLL+D+SKL W    +KR  T+VK+++NHH T++ ++   +   L+ P   RF +      R    ++ LK       V  ++       +   + ++V    Q DA    +W EL   VEMM P+Y LLR  D  GT P              +++ + ++  A            E VL  E+R  + E    R K +  P+ + A+ LDP        +DRD A + +    L       R    H D     I     E    P A    +    K +K      +  A  + P++WW TYG   +P L  +A++       +  +ERNWS    V   R  R+ P    KLV++  N+ L   SK F    ++    E  ES
Sbjct:  113 CAAHCCSLLLRDISKLDWVKGTVKRGHTIVKFIRNHHTTNSFMMSLDSSLTLLQPTEVRFGSVYRMLERIHNRRAVLKDMVDSMNVGKWKAMRWSSAKLQAKADLVYFTLQRDA----WWTELRKVVEMMEPLYLLLRRMDKDGTAPSNLV----------EYDRLMERMLA------------EVVLTPEQRSSVLEKVRDRMKMMRQPVHALAFLLDPRRRDPKWLLDRDSALVQNALCYLQRQIGAPRKPKAHVD-----IMKDLREFHKRPTAYDPKR----KDKKMWEPDAVEDADIILPSEWWATYGG-DVPKLQAIAIKVMGMWSTATPAERNWSSMDLVHSKRRNRLKPATVEKLVYIHWNMNLLRASKNFKDHHYVDLWAEFFES 470          
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Match: A0A388LVF2_CHABU (Integrase catalytic domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LVF2_CHABU)

HSP 1 Score: 96.7 bits (239), Expect = 6.980e-18
Identity = 88/371 (23.72%), Postives = 160/371 (43.13%), Query Frame = 1
Query:    7 CGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLDKTKH-RLINPCPTRFATNVLSCMRTMKVKSALKLFAADERVAAYQ--RSATVPIRTVGREVVGELKQGDALEGEFWFELEFFVEMMWPVYDLLRTAD--GTVPCMFKFFNGMLKLPEKWNEVCKKQAAAANDLEGEGWKDESVLERRGEMKEMNEKRRKYVHAPMLSAAYALDPE------YIDRDVAEIDDGQILLDLHTMYERLLINHGDDSAAAIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYAQNMSPADWWKTYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERARKLVFVRANLRL 1086
            C AH   LLL+D+SKL W    +KR  T+VK+++NHH+T+++++       L+ P   RF +  +   R +  K+ L      +  A +   R +T  +++    V   +++       +W EL+  V++M P+Y LLR  D  GT P     ++ M++       + ++Q A+  D   +                    R K +  P+ +  + LDP         DRD A + +    L           +H +      +  ++    GP  +          + W+    +   + ++P++WW TYG   +PDL  +A++       +  +ERNWS    V   R   + PE   KLV++  N++L
Sbjct:  996 CAAHCCSLLLRDISKLDWVKSTVKRGHTIVKFIRNHHSTNSLMMSMDDSLTLLCPTKVRFGSVYMMLERLLNRKAVLSDMVDRKNAARWTGIRWSTTKLKSKADLVYFTMRRDG-----WWTELKKVVDVMEPLYSLLRRMDRDGTSPTNLVEYDDMIERKLTHVVLTEEQRASVMDKVRD--------------------RVKMMWQPVHALVFLLDPRRRNSRWLYDRDNAIVQNAMHYLQRQVGGPWKGPDHLEVLGDLHEFHKDPTPNGPKRK--------DKKMWEHDAKVD-CEKLTPSEWWATYGG-DVPDLQAIAIKVMGMWSTATPAERNWSSMDFVHSKRRNSLKPETLEKLVYIHWNMQL 1331          
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Match: A0A843VI85_COLES (BED-type domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VI85_COLES)

HSP 1 Score: 95.5 bits (236), Expect = 1.540e-17
Identity = 94/384 (24.48%), Postives = 156/384 (40.62%), Query Frame = 1
Query:    7 CGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLDKTKHRLINPCPTRFATNVLSCMRTMKVKSALK-LFAADERVAAYQRSATVPIRTVGREVVGELKQGDALEGEFWFELEFFVEMMWPVYDLLRTADGTV-PCMFKFFNGMLKLPEKWNEVCKKQAAAANDLEGEGWKDESVLERRGEMKEMNEKRRKYVHAPMLSAAYALDPEYIDRDVAEIDDGQILLDLHTMYERLLINHGDDSAAAIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYAQNMSPADWWKTYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERARKLVFVRANLRLQSKEFT----KRLFIAWDPESV 1140
            C AH +DL+LK++  L     ++     + +++ NHH   A + + T   L+ P  TRFATN ++    +K K  LK +F  D+ + +   + +      G+EV G +   +     FW  +   V+++ P+Y++LR  DG   P +   +  +    +K  EV  + A    D+  + W                    + +   +  AAY L P Y                 H  +E   + + DD  AA     E     PV  A +                         DWW  +G    P L K+A++  S+  +S+G ERNWS +  +      R+   R  +LV+V  N+RL+ K  T    KR  + +DP  V
Sbjct:  445 CAAHCVDLMLKEIGTLQPVKMVVDAGQKITRFIYNHHLVLAWMRESTGGELLRPGVTRFATNFVALQSLLKHKDGLKRMFRGDKWLQSNFANTSD-----GKEVEGIVNSSN-----FWDRVFKLVQIIEPLYEVLRVVDGDRRPSIGLVYAKLEAARKKIREVSPRHAHLVLDVVDDRWD-------------------RQMSRDLHMAAYYLHPAY-----------------HYAHE---LAYDDDLTAAFARVVERLSRSPVLAADAIDEA--------------------TDWWFNFGH-SAPTLRKIAVKVLSQTSSSSGCERNWSTFALIHTKVRNRLSYRRLDQLVYVHYNMRLRVKHLTEDPKKRGDVEYDPIDV 758          
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Match: A0A843TN79_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843TN79_COLES)

HSP 1 Score: 93.6 bits (231), Expect = 6.600e-17
Identity = 96/390 (24.62%), Postives = 160/390 (41.03%), Query Frame = 1
Query:    7 CGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLDKTKHRLINPCPTRFATNVLSCMRTMKVKSALK-LFAADERVAAYQRSATVPIRTVGREVVGELKQGDALEGEFWFELEFFVEMMWPVYDLLRTADGTV-PCMFKFFNGMLKLPEKWNEVCKKQAAAANDLEGEGWKDESVLERRGEMKEMNEKRRKYVHAPMLSAAYALDPEYIDRDVAEIDDGQILLDLHTMYERLLINHGDDSAAAIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYA------QNMSPADWWKTYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERARKLVFVRANLRLQSKEFT----KRLFIAWDPESV 1140
            C AH +DL+LK++  L     ++     +  ++ NHH   A + + T   L+ P  TRFATN ++    +K K  LK +F  D+ + +   S +      G+EV G +   +     FW  +   V+++ P+Y++LR  DG   P +   +  +    +K  EV  + A    D+  + W                    + +   +  AAY L P Y                 H  +E                A +EA    V    S+  + + R+  G    P A       +   ADWW  +G   +P L K+A++  S+  +S+G ERNWS +  +      R+   R  +LV+V  N+RL+ K  T    K   I +DP  +
Sbjct:  325 CAAHCVDLMLKEIGTLQPVKMVVDAGQKITHFIYNHHLVLAWMRESTGGELLRPGVTRFATNFVALQSLLKHKDGLKRMFRGDKWLQSNFASTSD-----GKEVEGIVNSSN-----FWDRVFKLVQIIEPLYEVLRVVDGDRRPSIGLVYAKLEAARKKIREVSPRHAHLVLDVVDDRWD-------------------RQMSRDLHMAAYYLHPAY-----------------HYAHEL---------------AYDEAAFARVVERLSRSPMKRFREATGTFAEPSAIAGRERVDGDAADWWFNFGH-SVPTLRKIAVKVLSQTSSSSGCERNWSTFALIHTKVRNRLSYRRLDQLVYVHYNMRLRVKHLTEDPKKHGDIEYDPIDI 652          
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Match: A0A388JUG5_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JUG5_CHABU)

HSP 1 Score: 93.6 bits (231), Expect = 7.100e-17
Identity = 86/365 (23.56%), Postives = 160/365 (43.84%), Query Frame = 1
Query:    7 CGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLDKTKH-RLINPCPTRFATNVLSCMRTMKVKSALKLFAADERVAAYQ--RSATVPIRTVGREVVGELKQGDALEGEFWFELEFFVEMMWPVYDLLRTAD--GTVPCMFKFFNGMLKLPEKWNEVCKKQAAAANDLEGEGWKDESVLERRGEMKEMNEKRRKYVHAPMLSAAYALDPE------YIDRDVAEIDDGQILLDLHTMYERLLINHGDDSAAAIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYAQNMSPADWWKTYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERARKLVFV 1068
            C AH   LLL+D+SKL W    +KR  T+VK+++NHH+T+++++       L+ P   RF +  +   R +  K+ L      +  A +   R +T  +++    V   +++       +W EL+  V++M P+Y LLR  D  GT P     ++ +++       +  +Q A             SV+E+  ++ +M       +  P+ + A+ LDP         DRD A + +    L      +    +H +      +  +E    GP  +          + W+    +   + ++P++WW TYG   +PDL  +A++       +  +ERNW+    V   R   + P+   KL +V
Sbjct:  584 CAAHCCSLLLQDISKLDWVKRTVKRGHTIVKFIRNHHSTNSLMMSMNDSLTLLRPMEVRFGSVYMMLERLLNRKAVLSDMVDRKNAARWTGIRWSTAKLKSKADLVYFTMRRDG-----WWMELKKVVDVMEPLYSLLRRMDRDGTSPTNLVEYDDLIERKLTHVVLTDEQRA-------------SVMEKARDLVKM-------MRQPVHALAFLLDPRRRNPRWLYDRDNAIVQNAMRYLQRQVGGDWKGPDHLEVLGDLHEFHKEPTPKGPKRK--------DKKMWEPDAKVD-CKKLTPSEWWATYGG-DVPDLQAIAIKVMGMWSTTTPTERNWASMDFVHSKRRNNLKPDTLEKLGYV 913          
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Match: A0A388L5J5_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L5J5_CHABU)

HSP 1 Score: 91.7 bits (226), Expect = 2.670e-16
Identity = 96/372 (25.81%), Postives = 166/372 (44.62%), Query Frame = 1
Query:    7 CGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLDKTKHRLI-NPCPTRFATNVLSCMRTMKVKSALKLFAADERVAAYQ--RSATVPIRTVGREVVGELKQGDALEGEFWFELEFFVEMMWPVYDLLRTAD--GTVPCMFKFFNGMLKLPEKWNEVCKKQAAAANDLEGEGWKDESVLER-RGEMKEMNEKRRKYVHAPMLSAAYALD-----PEYI-DRDVAEIDDGQILLDLHTMYERLLINHGDDSAAAIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYAQNMSPADWWKTYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERARKLVFVRANLRL 1086
            C  H   LLL+D+SKL W    +KR+ T+VK+++NHH T ++++      L+  P   RF +  +   R    ++ LK       V  ++  R +T  +++    V   L+     EG +W EL+  VE+M P+Y LLR  D  GT P     ++ +++       + ++Q                VLE+ R  MK M +        P+ + A+ LD     P+++ DRD A + +      L  +  R+      D+   I +   E    P           K +K      +  +  +SP++WW T+G   +P+L  +A++      ++  +ERNWS    V   R  R+ P    KLV++  N++L
Sbjct:  259 CAVHCCSLLLRDISKLDWMKGTVKRSHTIVKFIRNHHCTHSLMMSLDDSLLLLRPTEVRFGSVYMMMERLYDRRAILKQMVEGSLVGRWKAMRWSTTKLQSKADLVFFTLRS----EG-WWPELKKVVEVMEPLYVLLRRMDKDGTAPSNLVEYDRLMERMLAEIVLTEEQRRM-------------VLEKVRDCMKMMPQ--------PVHALAFLLDQRRREPKWLLDRDNALVQNA-----LRYLQRRIGGAWKSDAHVQILSDLREFHTKPT----GYNPRRKDKKMWDGDAVANSNTISPSEWWATHGG-DVPELQAIAMKVMGMWSSATPAERNWSSMDLVHSKRRNRLNPSTLEKLVYIHWNMQL 594          
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Match: A0A388LUI5_CHABU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LUI5_CHABU)

HSP 1 Score: 90.5 bits (223), Expect = 3.880e-16
Identity = 101/373 (27.08%), Postives = 158/373 (42.36%), Query Frame = 1
Query:    7 CGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLD-KTKHRLINPCPTRFATNVLSCMRTMKVKSALKLFAADERVAAYQRSATVPIRTVGREVV--GELKQGDALEGEFWFELEFFVEMMWPVYDLLRTAD--GTVPCMFKFFNGML--KLPEKWNEVCKKQAAAANDLEGEGWKDESVLERRGEMKEMNEKRRKYVHAPMLSAAYALD-----PEYI-DRDVAEIDDGQILLDLHTMYERLLINHGDDSAAAIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYAQNMSPADWWKTYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERARKLVFVRANLRL 1086
            CGAH   LLLKD++ L W  DI+K   T+VK++KNHHAT+ +++       L  P   RF +      R +  +  L     D + AA  RS    +R  G ++    +L         +W +++  V +M PVY LL+  D  G  P     F+ M+  KLP   N V  K                   ER   M ++ + R + +  P  +AA+ LD     P ++ D D A + +    L     +E  L  H D      +  RE  +G    +      ++     +GA         +P DWW  +G   + DL K+A+R       +  +ERNW+    V   R   + PE    LV++  N++L
Sbjct:   15 CGAHCCSLLLKDLANLAWVRDIVKTANTIVKFIKNHHATNGLMMTIDYSLTLRRPTEVRFGSVYQMLQRVLNREHVLSEM-VDGKFAARWRS----LRWSGEKLQRKADLVYFTLRSETWWADVKKIVAIMEPVYSLLKRMDKEGVSPTNLVEFDEMIARKLP---NVVLTK------------------TEREDVMAKVTD-RVQMMRQPAHAAAFLLDLRRRDPGWLNDPDSALVQNAMRFLMRQIGHEWNLKKHVDMWDQLWEFLREPVEG----KVRKNEKIWTDCAREGAT------KCAPQDWWGLHGG-DVRDLQKIAMRVLGMWSTTTPAERNWASMDFVHSKRRNSLSPESLENLVYIHWNMQL 349          
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Match: UPI001244D623 (uncharacterized protein LOC115964702 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI001244D623)

HSP 1 Score: 90.1 bits (222), Expect = 5.390e-16
Identity = 85/381 (22.31%), Postives = 174/381 (45.67%), Query Frame = 1
Query:    7 CGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLDKTKHR-LINPCPTRFATNVLSCMRTMKVKSALK-LFAADERVAAYQRSATVPIRTVGREVVGELKQGDALEGEFWFELEFFVEMMWPVYDLLRTADGT-VPCMFKFFNGMLKLPEKWNEVCKKQAAAANDLEGEGWKDESVLERRGEMKEMNEKRRKYVHAPMLSAAYALDPEYIDRDVAEIDDGQILLDLHTMYERLLINHGDDSAAAIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYAQNMSPADWWKTYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERARKLVFVRANLRLQSKEFTKRLFIAWDPESV 1140
            C AH +DL+LKD+ K+P  A  ++R + +  ++ NH     ++ + T  R L+    TRF T+ L+   T K K +L+ +F ++E V +         R V  E++        L   FW  + + +++M P+  +L + D    P M   +  M +  E   +   +     +++         +++ R E +         +H P+ +  + L+P+Y   D   + + +I  +L+   +RL+ +        ++ +  +       +A   + + ++RK +           +P +WW  YG    P+L ++ ++  S   ++ G ERNWS++  +   R  R+  +R   L FV+ N +++++ + KR  I  DP S+
Sbjct:   64 CAAHCIDLILKDIGKIPRIAKTLERAIQLTGYIYNHGGVLKMMREYTNQRELVRTGKTRFCTSYLTIKSTFKQKHSLRAMFTSEEWVHSRWAKEANAKRVV--EMI--------LMPSFWNTIVYILKVMGPLVRVLPSVDNERKPTMSYIYEAMDRAKEAIIKAFNENKERYSNIF-------KIIDERWECQ---------LH-PLHAVGHFLNPKYFYFDPNIVTNHEITAELYACIQRLVPSTKIQDKIMVELSMYK-------KAEGLFGIQRSRKTR-----------APTEWWSLYGS-STPNLQQLTIKILSLTCSACGCERNWSVFEQIHTKRRNRLAQKRLNDLFFVKYNQKMKAR-YDKRDVI--DPISL 395          
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Match: A0A388MAD5_CHABU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MAD5_CHABU)

HSP 1 Score: 90.5 bits (223), Expect = 6.310e-16
Identity = 105/377 (27.85%), Postives = 159/377 (42.18%), Query Frame = 1
Query:    7 CGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLDKTK----HRLINPCPTRFATNVLSCMRTMKVKSALKLFAADERVAAYQRSATVPIRTVGREVVGELKQGDALEGEFWFELEFFVEMMWPVYDLLRTAD--GTVPCMFKFFNGMLKLPEKWNEVCKKQAAAANDLEGEGWKDESVLERRGEMKEMNEKRRKYVHAPMLSAAYALDPEYIDRDVAEIDDGQILLDLHTMYERLLINHGDDSAA-----------AIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYAQNMSPADWWKTYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERARKLVFVRANLRL 1086
            C AH L+LLLK +S  P   ++ KR  T+VK +KNHH T+ + LD  +      LI     RFA+  L   R    K  LK    +  +     S     R +   V   ++  D     +W E+E  V++M+PVYDLLR  D  GT P     F   L          K+ A           + ES+ ++         KR K +H P+ +A + L+P    RD   + D +  L  +TM  + L++   + A             ++   +E  G      A Q SL+       A F       + +DW   +G+   P L ++A+R T+    +   ERNWS    V   R  ++  E   KLV+V  NL+L
Sbjct:  281 CAAHCLNLLLKGISYEPCVHELYKRGKTIVKCIKNHHKTAQLFLDSLETERTRTLIMSTDVRFASVYLMLERLFDRKKVLKNMMKEGWLDIKWSSRKK--RNIADVVYMTIRSDD-----WWREVEAAVDIMYPVYDLLRKMDKSGTAPYQLWGFEDAL---------IKRMATIPTLTPA---RQESIAKK-------VRKRCKMMHQPVHAANFLLNPA--KRDPRWMQDPECPLVQNTM--KFLLSQCKEGALWGCKEQLHLWEDLKVFHKEPKGNSSLPPAKQDSLWTDF----AKFDSSLDKHTSSDWCWCHGK-SHPKLQRIAVRVTAMWSTATPCERNWSTLDLVHEKRRNQLSSETINKLVYVHWNLQL 622          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19591.5835.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A388K4Z0_CHABU3.390e-1924.26Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A388LAH1_CHABU2.280e-1826.90RNA-directed DNA polymerase n=1 Tax=Chara braunii ... [more]
A0A388LVF2_CHABU6.980e-1823.72Integrase catalytic domain-containing protein n=1 ... [more]
A0A843VI85_COLES1.540e-1724.48BED-type domain-containing protein n=1 Tax=Colocas... [more]
A0A843TN79_COLES6.600e-1724.62Uncharacterized protein n=1 Tax=Colocasia esculent... [more]
A0A388JUG5_CHABU7.100e-1723.56Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A388L5J5_CHABU2.670e-1625.81Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A388LUI5_CHABU3.880e-1627.08Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ch... [more]
UPI001244D6235.390e-1622.31uncharacterized protein LOC115964702 n=1 Tax=Querc... [more]
A0A388MAD5_CHABU6.310e-1627.85Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19591contigL-elsbetiae_contig19591:1256..2631 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score116.7
Seed ortholog evalue2.4e-23
Seed eggNOG ortholog3880.AES80660
Hectar predicted targeting categoryother localisation
EggNOG OGs2C7QK@1,2QRQU@2759,37TNR@33090,3GDSB@35493
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Exons2
Model size1152
Cds size1152
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815812.5866618-CDS-L-elsbetiae_contig19591:1255..14741622815812.5866618-CDS-L-elsbetiae_contig19591:1255..1474Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19591 1256..1474 +
1691683118.9623532-CDS-L-elsbetiae_contig19591:1255..14741691683118.9623532-CDS-L-elsbetiae_contig19591:1255..1474Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19591 1256..1474 +
1622815812.5977116-CDS-L-elsbetiae_contig19591:1698..26311622815812.5977116-CDS-L-elsbetiae_contig19591:1698..2631Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19591 1699..2631 +
1691683118.975921-CDS-L-elsbetiae_contig19591:1698..26311691683118.975921-CDS-L-elsbetiae_contig19591:1698..2631Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19591 1699..2631 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19591.5835.1prot_L-elsbetiae_contig19591.5835.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig19591 1256..2631 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig19591.5835.1

>prot_L-elsbetiae_contig19591.5835.1 ID=prot_L-elsbetiae_contig19591.5835.1|Name=mRNA_L-elsbetiae_contig19591.5835.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=384bp
MKCGAHALDLLLKDMSKLPWCADIIKRNLTVVKWVKNHHATSAILLDKTK
HRLINPCPTRFATNVLSCMRTMKVKSALKLFAADERVAAYQRSATVPIRT
VGREVVGELKQGDALEGEFWFELEFFVEMMWPVYDLLRTADGTVPCMFKF
FNGMLKLPEKWNEVCKKQAAAANDLEGEGWKDESVLERRGEMKEMNEKRR
KYVHAPMLSAAYALDPEYIDRDVAEIDDGQILLDLHTMYERLLINHGDDS
AAAIQAAREEADGGPVARAASQYSLYKTRKWKGAPFLPYAQNMSPADWWK
TYGRIGLPDLAKVALRTTSKIPASAGSERNWSLYGDVMGGRHGRMGPERA
RKLVFVRANLRLQSKEFTKRLFIAWDPESVESDG
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mRNA from alignment at L-elsbetiae_contig19591:1256..2631+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19591.5835.1 ID=mRNA_L-elsbetiae_contig19591.5835.1|Name=mRNA_L-elsbetiae_contig19591.5835.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1376bp|location=Sequence derived from alignment at L-elsbetiae_contig19591:1256..2631+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGTGTGGTGCGCATGCTTTGGACTTGCTCTTGAAGGACATGTCCAA GTTGCCGTGGTGCGCCGACATCATCAAGCGCAACCTCACCGTTGTGAAGT GGGTCAAGAACCACCACGCCACGAGTGCGATCCTATTGGACAAGACCAAG CACCGACTCATCAACCCGTGCCCAACCCGATTCGCCACCAACGTGCTCTC TTGCATGCGCACGATGAAGGTAAGATATTGTGTGCTGTTTTCGGGTTTTC GTTGTATTGTGTCTTGTGCGTTCGAGTTAGGGTTATAAAACAAGACACAG GCTCTATATTTCACGAAGTGAAAACTGCGCTGTAGCTTTCGCTGTTTTGT TTTTTGTTTCGCTTCTGCCCCCGTGTTGCTTTATTTCTCATCTCCCTCTT TCCCTCACATGCTGGTTTGTTTTTTCGACTTTAACTTCACCAGGTGAAAT CGGCGCTCAAGCTCTTCGCCGCTGACGAGCGTGTCGCAGCCTACCAACGG AGTGCGACCGTGCCGATCCGCACAGTTGGACGAGAGGTCGTGGGCGAGCT GAAGCAAGGGGATGCTCTCGAGGGGGAGTTCTGGTTCGAGCTGGAGTTCT TCGTTGAGATGATGTGGCCGGTGTACGACCTACTTCGCACGGCCGATGGC ACGGTGCCGTGCATGTTCAAATTCTTCAACGGCATGCTCAAGCTGCCGGA GAAGTGGAACGAGGTTTGCAAGAAACAGGCGGCGGCAGCAAACGACCTGG AAGGGGAAGGGTGGAAAGATGAGAGTGTGTTGGAACGGCGGGGAGAGATG AAAGAGATGAATGAGAAGCGTCGAAAGTACGTCCACGCTCCCATGCTCTC CGCCGCCTACGCTCTCGACCCCGAGTACATCGACCGAGACGTCGCCGAGA TCGACGACGGGCAGATCCTGCTGGATTTGCACACCATGTACGAACGGCTC CTGATCAACCATGGCGACGACTCCGCGGCAGCCATCCAAGCCGCACGCGA AGAGGCGGACGGGGGACCGGTGGCAAGGGCAGCAAGCCAGTACAGCCTCT ACAAGACCAGGAAGTGGAAGGGCGCACCGTTCTTGCCGTACGCCCAGAAC ATGTCCCCCGCAGACTGGTGGAAAACGTATGGGCGTATCGGCCTGCCGGA TTTGGCCAAAGTAGCGCTGCGCACGACTTCAAAGATACCTGCGTCGGCAG GATCGGAGCGCAATTGGAGTCTGTACGGGGATGTCATGGGCGGAAGGCAC GGGCGGATGGGCCCCGAGCGTGCCAGGAAGTTGGTGTTCGTGAGGGCTAA CTTGAGGCTGCAGAGCAAAGAGTTTACAAAGCGGTTGTTCATCGCGTGGG ACCCGGAGTCCGTAGAGTCAGACGGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig19591:1256..2631+

>mRNA_L-elsbetiae_contig19591.5835.1 ID=mRNA_L-elsbetiae_contig19591.5835.1|Name=mRNA_L-elsbetiae_contig19591.5835.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2304bp|location=Sequence derived from alignment at L-elsbetiae_contig19591:1256..2631+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGTGTGGTGCGCATGCTTTGGACTTGCTCTTGAAGGACATGTCCAA
GTTGCCGTGGTGCGCCGACATCATCAAGCGCAACCTCACCGTTGTGAAGT
GGGTCAAGAACCACCACGCCACGAGTGCGATCCTATTGGACAAGACCAAG
CACCGACTCATCAACCCGTGCCCAACCCGATTCGCCACCAACGTGCTCTC
TTGCATGCGCACGATGAAGATGAAGTGTGGTGCGCATGCTTTGGACTTGC
TCTTGAAGGACATGTCCAAGTTGCCGTGGTGCGCCGACATCATCAAGCGC
AACCTCACCGTTGTGAAGTGGGTCAAGAACCACCACGCCACGAGTGCGAT
CCTATTGGACAAGACCAAGCACCGACTCATCAACCCGTGCCCAACCCGAT
TCGCCACCAACGTGCTCTCTTGCATGCGCACGATGAAGGTGAAATCGGCG
CTCAAGCTCTTCGCCGCTGACGAGCGTGTCGCAGCCTACCAACGGAGTGC
GACCGTGCCGATCCGCACAGTTGGACGAGAGGTCGTGGGCGAGCTGAAGC
AAGGGGATGCTCTCGAGGGGGAGTTCTGGTTCGAGCTGGAGTTCTTCGTT
GAGATGATGTGGCCGGTGTACGACCTACTTCGCACGGCCGATGGCACGGT
GCCGTGCATGTTCAAATTCTTCAACGGCATGCTCAAGCTGCCGGAGAAGT
GGAACGAGGTTTGCAAGAAACAGGCGGCGGCAGCAAACGACCTGGAAGGG
GAAGGGTGGAAAGATGAGAGTGTGTTGGAACGGCGGGGAGAGATGAAAGA
GATGAATGAGAAGCGTCGAAAGTACGTCCACGCTCCCATGCTCTCCGCCG
CCTACGCTCTCGACCCCGAGTACATCGACCGAGACGTCGCCGAGATCGAC
GACGGGCAGATCCTGCTGGATTTGCACACCATGTACGAACGGCTCCTGAT
CAACCATGGCGACGACTCCGCGGCAGCCATCCAAGCCGCACGCGAAGAGG
CGGACGGGGGACCGGTGGCAAGGGCAGCAAGCCAGTACAGCCTCTACAAG
ACCAGGAAGTGGAAGGGCGCACCGTTCTTGCCGTACGCCCAGAACATGTC
CCCCGCAGACTGGTGGAAAACGTATGGGCGTATCGGCCTGCCGGATTTGG
CCAAAGTAGCGCTGCGCACGACTTCAAAGATACCTGCGTCGGCAGGATCG
GAGCGCAATTGGAGTCTGTACGGGGATGTCATGGGCGGAAGGCACGGGCG
GATGGGCCCCGAGCGTGCCAGGAAGTTGGTGTTCGTGAGGGCTAACTTGA
GGCTGCAGAGCAAAGAGTTTACAAAGCGGTTGTTCATCGCGTGGGACCCG
GAGTCCGTAGAGTCAGACGGAGTGAAATCGGCGCTCAAGCTCTTCGCCGC
TGACGAGCGTGTCGCAGCCTACCAACGGAGTGCGACCGTGCCGATCCGCA
CAGTTGGACGAGAGGTCGTGGGCGAGCTGAAGCAAGGGGATGCTCTCGAG
GGGGAGTTCTGGTTCGAGCTGGAGTTCTTCGTTGAGATGATGTGGCCGGT
GTACGACCTACTTCGCACGGCCGATGGCACGGTGCCGTGCATGTTCAAAT
TCTTCAACGGCATGCTCAAGCTGCCGGAGAAGTGGAACGAGGTTTGCAAG
AAACAGGCGGCGGCAGCAAACGACCTGGAAGGGGAAGGGTGGAAAGATGA
GAGTGTGTTGGAACGGCGGGGAGAGATGAAAGAGATGAATGAGAAGCGTC
GAAAGTACGTCCACGCTCCCATGCTCTCCGCCGCCTACGCTCTCGACCCC
GAGTACATCGACCGAGACGTCGCCGAGATCGACGACGGGCAGATCCTGCT
GGATTTGCACACCATGTACGAACGGCTCCTGATCAACCATGGCGACGACT
CCGCGGCAGCCATCCAAGCCGCACGCGAAGAGGCGGACGGGGGACCGGTG
GCAAGGGCAGCAAGCCAGTACAGCCTCTACAAGACCAGGAAGTGGAAGGG
CGCACCGTTCTTGCCGTACGCCCAGAACATGTCCCCCGCAGACTGGTGGA
AAACGTATGGGCGTATCGGCCTGCCGGATTTGGCCAAAGTAGCGCTGCGC
ACGACTTCAAAGATACCTGCGTCGGCAGGATCGGAGCGCAATTGGAGTCT
GTACGGGGATGTCATGGGCGGAAGGCACGGGCGGATGGGCCCCGAGCGTG
CCAGGAAGTTGGTGTTCGTGAGGGCTAACTTGAGGCTGCAGAGCAAAGAG
TTTACAAAGCGGTTGTTCATCGCGTGGGACCCGGAGTCCGTAGAGTCAGA
CGGA
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