Homology
BLAST of mRNA_L-elsbetiae_contig19532.5809.1 vs. uniprot
Match:
A0A6H5JRM0_9PHAE (DOCKER domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRM0_9PHAE)
HSP 1 Score: 132 bits (332), Expect = 2.260e-36
Identity = 72/84 (85.71%), Postives = 75/84 (89.29%), Query Frame = 1
Query: 1 IVYRRVVTLLSPIECSIDDIGSRIMTMRDELRDQVQAGSERLSDARGLTRLVQGSVLPQVNGGAVEVAETFLKALPSEEGNALP 252
IVYRRVVTLLSPIECSIDDIGSRI+TMR+E VQAG +R SD R LTRLVQGSVLPQVNGGAVEVAETFLKALP EEGNALP
Sbjct: 5 IVYRRVVTLLSPIECSIDDIGSRIVTMREE----VQAGIDRASDTRCLTRLVQGSVLPQVNGGAVEVAETFLKALPPEEGNALP 84
BLAST of mRNA_L-elsbetiae_contig19532.5809.1 vs. uniprot
Match:
D8LBY0_ECTSI (DOCKER domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY0_ECTSI)
HSP 1 Score: 92.8 bits (229), Expect = 1.530e-22
Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query: 4 VYRRVVTLLSPIECSIDDIGSRIMTMRDELRDQVQAGSERLSDARGLTRLVQGSVLPQVN 183
VYRRVVTLLSPIECSIDDIGSRI+TMR+E+ QAG +R SD RGLTRLVQGSVLPQVN
Sbjct: 2 VYRRVVTLLSPIECSIDDIGSRIVTMREEM----QAGIDRASDTRGLTRLVQGSVLPQVN 57
BLAST of mRNA_L-elsbetiae_contig19532.5809.1 vs. uniprot
Match:
A0A7R9U2A1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2A1_9STRA)
HSP 1 Score: 67.0 bits (162), Expect = 8.200e-11
Identity = 36/71 (50.70%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 4 VYRRVVTLLSPIECSIDDIGSRIMTMRDELRDQVQAGSERLSDARGLTRLVQGSVLPQVNGGAVEVAETFL 216
V RR L+SPI+C++DD+ R + MR EL A D + L RLV GSV+PQVNGGA+E+AE FL
Sbjct: 1837 VVRRRAILMSPIDCAVDDLSKRCVQMRMELAKPPTA-----VDKQALMRLVSGSVIPQVNGGAMEIAECFL 1902
BLAST of mRNA_L-elsbetiae_contig19532.5809.1 vs. uniprot
Match:
A0A836CP73_9STRA (DOCKER domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP73_9STRA)
HSP 1 Score: 58.9 bits (141), Expect = 3.820e-9
Identity = 41/79 (51.90%), Postives = 49/79 (62.03%), Query Frame = 1
Query: 4 VYRRVVTLLSPIECSIDDIGSRIMTMRDELRDQVQAGSERL--SDARGLTRLVQGSVLPQVNGGAVEVAETFLKALPSE 234
V R V LSPIECSIDDI +RI MR+E V AG +R ++ + L +LVQGSVLPQV A E A L+AL E
Sbjct: 1 VAHRAVRFLSPIECSIDDIQTRIRVMREE----VAAGIDRRKRNNTQNLMQLVQGSVLPQVCSMAPE-ASLLLRALQEE 74
BLAST of mRNA_L-elsbetiae_contig19532.5809.1 vs. uniprot
Match:
A0A7S3H9U4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9U4_9STRA)
HSP 1 Score: 52.4 bits (124), Expect = 9.590e-6
Identity = 32/71 (45.07%), Postives = 39/71 (54.93%), Query Frame = 1
Query: 4 VYRRVVTLLSPIECSIDDIGSRIMTMRDELRDQVQAGSERLSDARGLTRLVQGSVLPQVNGGAVEVAETFL 216
V R + PIE +I DI RI M EL V+ S D L R+VQG+V+PQVN G EVA+ FL
Sbjct: 1 VQSREIRTYCPIEVAIYDIEERIEAMESELEKVVRNPS----DCNNLMRIVQGTVMPQVNAGVGEVAKVFL 67
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19532.5809.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 5
0 1 Expect = 2.26e-36 / Id = 85.71 Expect = 1.53e-22 / Id = 81.67 Expect = 8.20e-11 / Id = 50.70 Expect = 3.82e-9 / Id = 51.90 Expect = 9.59e-6 / Id = 45.07 Sequence A0A6H5JRM0_9PHAE D8LBY0_ECTSI A0A7R9U2A1_9STRA A0A836CP73_9STRA A0A7S3H9U4_9STRA
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19532.5809.1
>prot_L-elsbetiae_contig19532.5809.1 ID=prot_L-elsbetiae_contig19532.5809.1|Name=mRNA_L-elsbetiae_contig19532.5809.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp
IVYRRVVTLLSPIECSIDDIGSRIMTMRDELRDQVQAGSERLSDARGLTR LVQGSVLPQVNGGAVEVAETFLKALPSEEGNALPPTTPPAVAVHDGAAG back to top mRNA from alignment at L-elsbetiae_contig19532:105..1231+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19532.5809.1 ID=mRNA_L-elsbetiae_contig19532.5809.1|Name=mRNA_L-elsbetiae_contig19532.5809.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1127bp|location=Sequence derived from alignment at L-elsbetiae_contig19532:105..1231+ (Laminarionema elsbetiae ELsaHSoW15)ATCGTCTACCGGAGGGTGGTGACGCTCCTGTCGCCGATAGAGTGCTCCAT
CGACGACATCGGTTCTCGGATCATGACGATGCGGGACGAGCTGCGGGACC
AGGTGCAGGCCGGGAGCGAGCGCCTGAGCGACGCGAGGGGACTTACGCGG
CTGGTCCAGGGGAGCGTGTTGCCGCAG GTGCATGCATATGTTATGTCGCT
ATTTATCAAATCGCCTACGTCTTTGGCGTTGTCGGTGGCTGCTGCTGTCG
TTGCTGCCGCTGCTGCCGCTGCTGCTGCTGCTGCTGTTGTTGTTGGTGTT
GTTGTCGTTGTCTCGGATTGTGTGCGGGCGTTGGTGCCGGCGTTGGTGGT
GTCATCGGTGTTGGGCCGTTTGGCTGTGCATGAACTGGCAAGCTTTGAAA
GAAGAACGGCAGTTAATAATCAAAAGCTTTGTTGTCCGCTCCAGTGGCGC
AACCACGCCAATGCACACCAACGACCCCATGGGCGCTTGCACTCGCCGCC
AGGCCACTGAACTAGACCCACGAGTCACAAGCCCCACCGCAGCCTGGTCC
ATTTCGTGCTGATGCGTTCGAGAATCAATAACCGATGGTCCTAGAACCCC
CCCCCCCCCCCCCTCCCTGGGGAAATGCCCAACCAAAGCCATTTTTTTGA
CAGCGACCCTCTCCCGGGACCCCGCCCAACCCNNNNNNNNNNCCCCCCCG
CGGCCTGGCCCATTTCGTGGGGATGCGTTCGAAAACCAAAAACCGAGGGC
CCAAGACCCCCCCCCCCCCCCCCTCGTCCATGCGAACATGACATACAAAG
TCAATTTTTTCAACTGTACACTCGCGCATGGACCCCGTCAAGCCCGTGCG
TGCCCCGGATACGCCGCCGCGCCGCCCTGCCGCGCCCCCGTCTCGGCTGT
CTGTGTCTCGTGTCTGATGCCCTGGCTTGGTCGTGTCTTGCTTTCTCTTA
TGTATGTTAACAACGCCTTGTGTGTCTCTCGTACGTACCTGCTCCTACCC
GGAAAAGGTCAACGGCGGCGCGGTGGAGGTGGCGGAGACCTTCCTGAAGG
CGCTGCCGTCCGAGGAGGGGAACGCCCTCCCGCCCACGACTCCCCCAGCG
GTCGCCGTTCACGACGGCGCAGCAGGC back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19532:105..1231+
>mRNA_L-elsbetiae_contig19532.5809.1 ID=mRNA_L-elsbetiae_contig19532.5809.1|Name=mRNA_L-elsbetiae_contig19532.5809.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=594bp|location=Sequence derived from alignment at L-elsbetiae_contig19532:105..1231+ (Laminarionema elsbetiae ELsaHSoW15) ATCGTCTACCGGAGGGTGGTGACGCTCCTGTCGCCGATAGAGTGCTCCAT CGACGACATCGGTTCTCGGATCATGACGATGCGGGACGAGCTGCGGGACC AGGTGCAGGCCGGGAGCGAGCGCCTGAGCGACGCGAGGGGACTTACGCGG CTGGTCCAGGGGAGCGTGTTGCCGCAGATCGTCTACCGGAGGGTGGTGAC GCTCCTGTCGCCGATAGAGTGCTCCATCGACGACATCGGTTCTCGGATCA TGACGATGCGGGACGAGCTGCGGGACCAGGTGCAGGCCGGGAGCGAGCGC CTGAGCGACGCGAGGGGACTTACGCGGCTGGTCCAGGGGAGCGTGTTGCC GCAGGTCAACGGCGGCGCGGTGGAGGTGGCGGAGACCTTCCTGAAGGCGC TGCCGTCCGAGGAGGGGAACGCCCTCCCGCCCACGACTCCCCCAGCGGTC GCCGTTCACGACGGCGCAGCAGGCGTCAACGGCGGCGCGGTGGAGGTGGC GGAGACCTTCCTGAAGGCGCTGCCGTCCGAGGAGGGGAACGCCCTCCCGC CCACGACTCCCCCAGCGGTCGCCGTTCACGACGGCGCAGCAGGC back to top