mRNA_L-elsbetiae_contig195.5796.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: D8LC11_ECTSI (COX assembly mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC11_ECTSI) HSP 1 Score: 166 bits (420), Expect = 1.770e-46 Identity = 83/102 (81.37%), Postives = 92/102 (90.20%), Query Frame = 3 Query: 255 MSSVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELELDQDT*SSRAK*PSG 560 M+++KDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGM+VVFSCR QN LMNSCLNQHTN ESF++YK ERE+EL ++T AK PSG Sbjct: 1 MATLKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMLVVFSCREQNALMNSCLNQHTNEESFDRYKFEREIELHRET--QAAKSPSG 100
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A8K1C5Z8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Z8_PYTOL) HSP 1 Score: 104 bits (259), Expect = 1.990e-23 Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 3 Query: 261 SVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 518 + K+ R+ RLSWS +AEH+LR+EL +IA+ +C D+ KFA CARE G+MV+F CR QNK MN CL+Q+TN E F YK +RE E+ Sbjct: 9 TAKERFRSSRLSWSNQAEHKLRQELNDIAIAKCRDTTEKFAVCARESGLMVIFRCREQNKAMNDCLHQYTNDEQFRVYKEKREKEI 94
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A3R7H0R3_9STRA (COX assembly mitochondrial protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H0R3_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.810e-20 Identity = 44/86 (51.16%), Postives = 64/86 (74.42%), Query Frame = 3 Query: 261 SVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 518 + KD R+ RLSWS +AEH+LR+EL +IA+ +C D +KFA CA+ G+MV F CR NK +N+CL+Q+T+AE F+ Y+ +RE E+ Sbjct: 10 TAKDTFRSSRLSWSNQAEHKLRQELSDIAIAKCRDISSKFAECAKANGLMVAFKCRQHNKDLNACLHQYTSAEQFDIYRQKREKEM 95
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A5D6XX76_9STRA (COX assembly mitochondrial protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX76_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 9.870e-20 Identity = 43/86 (50.00%), Postives = 63/86 (73.26%), Query Frame = 3 Query: 261 SVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 518 + K+ R+ RLSWS +AEH+LR+EL +IA+ +C D A FAACA+E+G++VVF CR NK MN CL+Q T+ E F+ Y+ +R ++ Sbjct: 16 TAKEHFRSSRLSWSNQAEHKLRQELNDIAIAKCRDVTASFAACAQEQGLLVVFKCRALNKAMNDCLHQFTSDEQFQAYRDKRSKDV 101
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: W2NEW3_PHYPR (COX assembly mitochondrial protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2NEW3_PHYPR) HSP 1 Score: 91.3 bits (225), Expect = 1.100e-18 Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 3 Query: 279 RNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 518 R+ RLSWS +AEH+L++EL +IA+ +C KFA CA+ G+MV F CR NK +N+CL+Q+TN E FE Y+ RE E+ Sbjct: 15 RSSRLSWSNQAEHKLKQELSDIAIAKCRSVSEKFAECAKANGLMVAFKCRDHNKALNACLHQYTNDEQFEIYRKRREKEM 94
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A484E0L3_BRELC (COX assembly mitochondrial protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0L3_BRELC) HSP 1 Score: 90.5 bits (223), Expect = 1.860e-18 Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 3 Query: 261 SVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELELDQ 524 + K R+ RLSWS +AEH+L+++L +IA+ +C +FA CAR G M++F CR QNK +N+CL+Q+TN E FE ++ RE E+ + Sbjct: 9 TAKAAFRSSRLSWSNQAEHKLKQQLSDIAIAKCRSVSEQFADCARANGFMIIFKCREQNKALNACLHQYTNDEQFELFRKRREKEMQE 96
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A3M6VM01_9STRA (COX assembly mitochondrial protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VM01_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 6.880e-18 Identity = 39/77 (50.65%), Postives = 57/77 (74.03%), Query Frame = 3 Query: 279 RNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERE 509 R+ RLSWS +AEH+L++EL +IA+ +C KFA CA+ G++VVF C+ NK +N+CL+Q+TN E FE Y+ +RE Sbjct: 15 RSSRLSWSNQAEHKLKQELSDIAIAKCHSVAEKFAECAKANGLLVVFKCQDHNKALNACLHQYTNDEQFEIYRQKRE 91
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: A0A6G0WRQ8_9STRA (COX assembly mitochondrial protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRQ8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.020e-17 Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = 3 Query: 237 KASKHTMSSVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELEL 518 KA T+ K R++RL WS +AE++L++EL IAL++C + + F C++E GMMVVF CR QN+++N CL+Q+TN E+ E + E+ E+ Sbjct: 5 KAKVPTVDDAKTEWRSERLQWSNQAENKLKQELNAIALQKCREYTSAFVECSKENGMMVVFKCREQNRVLNECLHQYTNKEALEALRAEKLNEI 98
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: W7TAA2_9STRA (COX assembly mitochondrial protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAA2_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.990e-17 Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 3 Query: 267 KDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELELDQD 527 +DG R RL +SKRAE LR+EL A K+C + +A FAACA+E GM V+F CR N MN+CL+Q+T+ FE++K R L L ++ Sbjct: 16 RDGSREGRLRFSKRAEQHLRDELALHARKQCQEPMAAFAACAKENGMFVIFKCRALNNAMNACLSQYTSESKFEEWKQTRGLSLAEE 102
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Match: M4BTE7_HYAAE (COX assembly mitochondrial protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTE7_HYAAE) HSP 1 Score: 88.2 bits (217), Expect = 2.150e-17 Identity = 38/88 (43.18%), Postives = 62/88 (70.45%), Query Frame = 3 Query: 279 RNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMMVVFSCRGQNKLMNSCLNQHTNAESFEKYKLERELELDQDT*SSR 542 R+ RLSWS +AEH+L++EL +IA+ +C +FA C++ G+M+VF CR N+ +N+CL Q+TN E FE Y+ +RE + ++ +S+ Sbjct: 30 RSSRLSWSNQAEHKLKQELSDIAIAKCRSVAEQFAECSKANGLMMVFKCRDHNRALNTCLKQYTNDEQFEIYRQKREQSMTEEERASK 117 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig195.5796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig195.5796.1 >prot_L-elsbetiae_contig195.5796.1 ID=prot_L-elsbetiae_contig195.5796.1|Name=mRNA_L-elsbetiae_contig195.5796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp MSSVKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGback to top mRNA from alignment at L-elsbetiae_contig195:3233..5692+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig195.5796.1 ID=mRNA_L-elsbetiae_contig195.5796.1|Name=mRNA_L-elsbetiae_contig195.5796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2460bp|location=Sequence derived from alignment at L-elsbetiae_contig195:3233..5692+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig195:3233..5692+ >mRNA_L-elsbetiae_contig195.5796.1 ID=mRNA_L-elsbetiae_contig195.5796.1|Name=mRNA_L-elsbetiae_contig195.5796.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=558bp|location=Sequence derived from alignment at L-elsbetiae_contig195:3233..5692+ (Laminarionema elsbetiae ELsaHSoW15)back to top |