mRNA_L-elsbetiae_contig1949.5792.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1949.5792.1
Unique NamemRNA_L-elsbetiae_contig1949.5792.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: D8LUB7_ECTSI (Intraflagellar transport protein 172 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB7_ECTSI)

HSP 1 Score: 442 bits (1137), Expect = 2.640e-141
Identity = 211/224 (94.20%), Postives = 216/224 (96.43%), Query Frame = 1
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672
            MQLRHLNT+ QP  GEG D  KMSKVMAVAWAPNNRKLAVCTADRVV+LYDENGEKRDRFSTKPAEKGPK YIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQ SPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN+PATLYNVDSFCA+LATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWG+SIVAAGNDGQV
Sbjct:    1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQV 224          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A6H5KMU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU1_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 5.620e-124
Identity = 174/182 (95.60%), Postives = 179/182 (98.35%), Query Frame = 1
Query:  127 ADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672
            ADRVV+LYDENGEKRDRFSTKPAEKGPK YIVRDLCFSPDS RLAVAQSDSIVFVYKLGLEWGESKSICNKFPQ SPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN+PATLYNVDSFCA+LATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVP+ALSWG+SIVAAGNDGQV
Sbjct:    2 ADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSARLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPFALSWGLSIVAAGNDGQV 183          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A835YVD3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD3_9STRA)

HSP 1 Score: 317 bits (812), Expect = 1.160e-100
Identity = 153/225 (68.00%), Postives = 177/225 (78.67%), Query Frame = 1
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGA-PSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672
            MQLRHL T+  P  GEG   + + KV A+AWAPNNRKLAVCTADRVV+L+DENGEKRD+FSTKPA+KGPK Y+VR +                  FVYKLG EWGE KSICNKFPQ SP+T ++W +ARPN++VFGLA+GKVKIGQL++NKPATLYN DSF A+LA S DGNGVVSAHADG +YRFLFDD+G  PSH +L +HP VPYALSWG SIVAAGND QV
Sbjct:    1 MQLRHLQTVLAPP-GEGGS-LPLQKVTAIAWAPNNRKLAVCTADRVVTLFDENGEKRDKFSTKPADKGPKNYMVRAMXXXXXXXXXXXXXXXXXXFVYKLGAEWGEKKSICNKFPQPSPVTALTWADARPNDIVFGLADGKVKIGQLRTNKPATLYNADSFVAALAASADGNGVVSAHADGAIYRFLFDDSGGGPSHARLAVHPCVPYALSWGRSIVAAGNDCQV 223          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A6A4ZTU4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZTU4_9STRA)

HSP 1 Score: 280 bits (717), Expect = 5.640e-91
Identity = 137/240 (57.08%), Postives = 179/240 (74.58%), Query Frame = 1
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEK-------------GPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675
            MQLRHL+T+  PT G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEK             G K Y+V+ L FSPDS++LAVAQSD+IVF+YKLGL+WG+ KSICNKF Q++ +T M WP + PNE+VFGL++GKVK+GQL+SNKPATLY   S+ ++L T+ +G  ++S+H D ++YRF+FDD NG  S TK+ IH  VPYALSWG +IVAAGND +VT
Sbjct:    1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKVPPATTAMYLACVGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVT 233          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A1V9ZC42_9STRA (Intraflagellar Transport Protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC42_9STRA)

HSP 1 Score: 300 bits (769), Expect = 2.100e-90
Identity = 142/227 (62.56%), Postives = 181/227 (79.74%), Query Frame = 1
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675
            MQLRHL+T+  PT G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEKG K Y+VR L FSPDS++LAVAQSD+IVF+YKLGLEWG+ KSICNKF Q+S +T M WP A PNE+VFGLA+GKVK+GQL+SNKPATLY+  S+ A++ T+P+G  ++S+H D ++YRF+FDD NG  + TK+ +H  VPYALSWG SIVAAGND +VT
Sbjct:  978 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYVVRALAFSPDSSKLAVAQSDNIVFIYKLGLEWGDKKSICNKFAQASSVTSMIWPVAHPNEIVFGLADGKVKLGQLRSNKPATLYSTGSYVATMCTNPEGTAILSSHYDQSIYRFIFDDVNGGSTQTKIALHTCVPYALSWGESIVAAGNDRKVT 1197          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A813BFQ9_9DINO (IFT172 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BFQ9_9DINO)

HSP 1 Score: 279 bits (713), Expect = 4.300e-89
Identity = 125/204 (61.27%), Postives = 164/204 (80.39%), Query Frame = 1
Query:   67 MSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675
            M KV AV W+PNNR+LA+ T D+VV L+DENGE+RD+FSTKPA+K  K Y++  + FSPDS++LAVAQSD+IVFVYKLGLEWG+ K+ICNKF Q+S +T ++WP+A PNEV FGL +GKVKIGQL++NK ATLY  DSF  S+ +SPDG+ ++S H DG++YRF F + G  P+  K  +H +VPYALSWG S++AAGND +V+
Sbjct:    1 MCKVTAVCWSPNNRRLAIVTVDKVVHLFDENGERRDKFSTKPADKTNKSYMITGMSFSPDSSKLAVAQSDNIVFVYKLGLEWGDKKTICNKFLQTSSVTALTWPKAHPNEVAFGLQDGKVKIGQLRNNKAATLYTTDSFTVSMCSSPDGHALLSGHLDGSIYRFHFGEGGQGPAQGKFAVHSAVPYALSWGASVLAAGNDRKVS 204          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A0P1AMT9_PLAHL (Intraflagellar transport protein 172 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMT9_PLAHL)

HSP 1 Score: 296 bits (757), Expect = 8.230e-89
Identity = 141/227 (62.11%), Postives = 179/227 (78.85%), Query Frame = 1
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYD-ENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675
            MQLRHL +L Q T G       M KV A+A++PNNR+LAV T DRVV L+D + GE++D+FSTKPA+KG K YIVR L FSPDS +LAVAQSD+I+FVYK+GLE+G+ KSICNKFPQ+S +T ++WP   PNE+VFGLA+GKVKIG L+SNKPATLY   S+ + + ++PDG  ++SAH DG +YRF+FDD  G P+H KLV+H  +PYALSWG SIVAAGND +V+
Sbjct:    1 MQLRHLTSLLQATEG-------MCKVTAIAYSPNNRRLAVVTVDRVVHLFDGQTGERKDKFSTKPADKGDKHYIVRALEFSPDSCKLAVAQSDNIIFVYKIGLEFGDKKSICNKFPQTSSVTSLTWPSTHPNEIVFGLADGKVKIGHLRSNKPATLYATGSYVSQVCSNPDGTAILSAHYDGAIYRFIFDDVTGGPTHAKLVVHSCIPYALSWGDSIVAAGNDRRVS 220          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A7S0RE83_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RE83_9CHLO)

HSP 1 Score: 277 bits (709), Expect = 3.270e-88
Identity = 135/228 (59.21%), Postives = 170/228 (74.56%), Query Frame = 1
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAE-KGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNV--DSFCASLATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672
            MQLRHL     PT G       +SKV  + W+ N+R++AV T DR+V L+DENG+++D+FSTKPA+  G K Y+VR + FSPDS++LA+ QSD+IVFVYKLG EWG+ KSICNKF QSS ITC++WP  + +EVVFGLAEGKVK+GQL+SNKPATLY     S+  SL +SPDG  ++S H DGT+YRF FDD    PS++KL  HP VPYALSWG SI  AG+D +V
Sbjct:    1 MQLRHLKCALPPTEG-------ISKVTTITWSSNSRRMAVVTTDRIVHLFDENGDRKDKFSTKPADPSGAKNYVVRGMAFSPDSSKLAIGQSDNIVFVYKLGTEWGDKKSICNKFHQSSAITCITWPHQQHHEVVFGLAEGKVKVGQLRSNKPATLYAHPDQSYVVSLCSSPDGRAILSGHLDGTIYRFYFDDGVLGPSNSKLTTHPVVPYALSWGESICVAGSDCKV 221          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A397EVR2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EVR2_9STRA)

HSP 1 Score: 290 bits (741), Expect = 4.170e-88
Identity = 137/227 (60.35%), Postives = 179/227 (78.85%), Query Frame = 1
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675
            MQLRHL+T+  PT G       M KV A+AW+PNNR+LAV T +RVV ++D   GE++D+FSTKPAEKG K Y+V+ L FSPDS++LAVAQSD+IVF+YKLGL+WG+ KSICNKF Q++ +T M WP + PNE+VFGL++GKVK+GQL+SNKPATLY   S+ ++L T+ +G  ++S+H D ++YRF+FDD NG  S TK+ IH  VPYALSWG +IVAAGND +VT
Sbjct:    1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVT 220          
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match: A0A8K1FJC7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC7_PYTOL)

HSP 1 Score: 293 bits (749), Expect = 9.840e-88
Identity = 137/226 (60.62%), Postives = 180/226 (79.65%), Query Frame = 1
Query:    1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYD-ENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672
            MQLRHL +L   T G       M KV AVAW+PNN++LAV T DRVV ++D + GE++D+FSTKPA+KG K YIVR+L FSPDS++LAVAQSD+IVF+YK+GL+WG+ KSICNKFPQS+ IT ++WP   PNE+VFGLA+GKVKIGQL+SNKPATLY   S+ +++ ++ +G  ++S H DG+++RF+FDD  G P++TK+ +H  VPYALSWG SIVAAGND +V
Sbjct:    1 MQLRHLTSLLPATEG-------MCKVTAVAWSPNNKRLAVVTVDRVVHMFDAQTGERKDKFSTKPADKGEKNYIVRELVFSPDSSKLAVAQSDNIVFIYKIGLDWGDKKSICNKFPQSTSITALTWPNTHPNEIVFGLADGKVKIGQLRSNKPATLYASGSYVSTVCSNMEGTAILSGHYDGSIFRFVFDDVTGGPTNTKITVHSCVPYALSWGESIVAAGNDRRV 219          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUB7_ECTSI2.640e-14194.20Intraflagellar transport protein 172 n=1 Tax=Ectoc... [more]
A0A6H5KMU1_9PHAE5.620e-12495.60Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YVD3_9STRA1.160e-10068.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A6A4ZTU4_9STRA5.640e-9157.08Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A1V9ZC42_9STRA2.100e-9062.56Intraflagellar Transport Protein n=1 Tax=Thraustot... [more]
A0A813BFQ9_9DINO4.300e-8961.27IFT172 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A0P1AMT9_PLAHL8.230e-8962.11Intraflagellar transport protein 172 n=1 Tax=Plasm... [more]
A0A7S0RE83_9CHLO3.270e-8859.21Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A397EVR2_9STRA4.170e-8860.35Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A8K1FJC7_PYTOL9.840e-8860.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1949contigL-elsbetiae_contig1949:21010..22646 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score441.8
Seed ortholog evalue1.9e-121
Seed eggNOG ortholog2880.D8LUB7
Preferred nameIFT172
KEGG koko:K19676
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000226,GO:0001501,GO:0001654,GO:0001655,GO:0001822,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001947,GO:0002009,GO:0002119,GO:0002164,GO:0003002,GO:0003007,GO:0003143,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005815,GO:0005856,GO:0005871,GO:0005875,GO:0005929,GO:0005930,GO:0006355,GO:0006357,GO:0006508,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0008134,GO:0008150,GO:0008152,GO:0008285,GO:0008544,GO:0008589,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009798,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009953,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010970,GO:0014020,GO:0015630,GO:0016043,GO:0016331,GO:0016485,GO:0019219,GO:0019222,GO:0019538,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021915,GO:0021953,GO:0022008,GO:0022607,GO:0022611,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030705,GO:0030990,GO:0030992,GO:0031122,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031503,GO:0031514,GO:0031982,GO:0032006,GO:0032501,GO:0032502,GO:0032838,GO:0032991,GO:0035050,GO:0035148,GO:0035239,GO:0035295,GO:0035735,GO:0035869,GO:0036064,GO:0036126,GO:0040024,GO:0042073,GO:0042127,GO:0042592,GO:0042995,GO:0043009,GO:0043010,GO:0043053,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044238,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045494,GO:0045880,GO:0045892,GO:0045934,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048565,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048736,GO:0048793,GO:0048856,GO:0048869,GO:0048871,GO:0050678,GO:0050680,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0055115,GO:0055123,GO:0060021,GO:0060041,GO:0060173,GO:0060249,GO:0060255,GO:0060271,GO:0060322,GO:0060348,GO:0060429,GO:0060562,GO:0060606,GO:0060972,GO:0061371,GO:0061525,GO:0065007,GO:0065008,GO:0070925,GO:0070986,GO:0071704,GO:0071840,GO:0072001,GO:0072175,GO:0072359,GO:0080090,GO:0097014,GO:0097223,GO:0097225,GO:0097228,GO:0097435,GO:0097542,GO:0097598,GO:0097708,GO:0097729,GO:0097730,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901564,GO:1902531,GO:1902679,GO:1903506,GO:1903507,GO:1905515,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.cilium assembly
EggNOG OGsKOG3616@1,KOG3616@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons4
Model size675
Cds size675
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1949.5792.1prot_L-elsbetiae_contig1949.5792.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1949 21010..22646 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815808.6926086-CDS-L-elsbetiae_contig1949:21009..211351622815808.6926086-CDS-L-elsbetiae_contig1949:21009..21135Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1949 21010..21135 +
1691683116.4331021-CDS-L-elsbetiae_contig1949:21009..211351691683116.4331021-CDS-L-elsbetiae_contig1949:21009..21135Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1949 21010..21135 +
1622815808.7033052-CDS-L-elsbetiae_contig1949:21456..216481622815808.7033052-CDS-L-elsbetiae_contig1949:21456..21648Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1949 21457..21648 +
1691683116.4442608-CDS-L-elsbetiae_contig1949:21456..216481691683116.4442608-CDS-L-elsbetiae_contig1949:21456..21648Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1949 21457..21648 +
1622815808.718221-CDS-L-elsbetiae_contig1949:21895..221511622815808.718221-CDS-L-elsbetiae_contig1949:21895..22151Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1949 21896..22151 +
1691683116.4526274-CDS-L-elsbetiae_contig1949:21895..221511691683116.4526274-CDS-L-elsbetiae_contig1949:21895..22151Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1949 21896..22151 +
1622815808.7295327-CDS-L-elsbetiae_contig1949:22545..226461622815808.7295327-CDS-L-elsbetiae_contig1949:22545..22646Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1949 22546..22646 +
1691683116.4609714-CDS-L-elsbetiae_contig1949:22545..226461691683116.4609714-CDS-L-elsbetiae_contig1949:22545..22646Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1949 22546..22646 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1949.5792.1

>prot_L-elsbetiae_contig1949.5792.1 ID=prot_L-elsbetiae_contig1949.5792.1|Name=mRNA_L-elsbetiae_contig1949.5792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLY
DENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKL
GLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN
KPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLV
IHPSVPYALSWGISIVAAGNDGQVT
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mRNA from alignment at L-elsbetiae_contig1949:21010..22646+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1949.5792.1 ID=mRNA_L-elsbetiae_contig1949.5792.1|Name=mRNA_L-elsbetiae_contig1949.5792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1637bp|location=Sequence derived from alignment at L-elsbetiae_contig1949:21010..22646+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGCTGAGACATTTGAACACTTTGACGCAGCCGACCGCCGGCGAGGG AAGTGATGACGTCAAGATGTCCAAGGTCATGGCGGTGGCTTGGGCACCGA ACAACCGCAAGCTGGCAGTTTGCACGGTGAGAAACAAGGAAACAACTCAT TTAGCGATACAGAGATCACACTTTTGATGGTGTAAAAAAATAATAAAAAA TATAGATTACACATCTCGGGCCGGACCACTCGAGAAAAAATTAACACCTC TCACGCCCTCGTCTTCCCCCGAGGCTAGGCGGCCTCAACGAAGGCTCAAG TATGTAGACTGTATTATAGGTGGAAGAGAAGGTCCGCCACAAACCAAGCA TGCGTGATCCAACAATCAAGCAACGAAGCCCAGCCGCCCGTCACCGCTCG GCTTCCTTCACCTCCGCCACCCCCTTCGCTTCCACTTCCCCGAAAAGGCG GATCGAGTGGTCTCTCTGTACGACGAAAACGGGGAAAAGCGAGACAGATT TTCCACCAAGCCCGCGGAGAAGGGGCCGAAGATCTACATCGTCAGAGACC TGTGTTTCAGCCCCGATAGCACAAGGCTCGCCGTAGCCCAAAGCGATAGC ATCGTCTTTGTCTATAAGCTCGGGTTGGAGTGGGGAGAGGTATGCACTTT TTTTTAAACGAGAGGGAGCGCGCGTGCGCGTGACGTGACCGGGGAGGGGG CGAGGACGAGTAGCGTAGAGTGCTGCAGCAGGCTCTCCCTCTTTTTCCCG CGCAGTCCTTGCTTCCAACGCATAAGCCACTAACCTGCATCAACAATTTT GCCCCACAACACCTCCAATCATATACTTACAGCACGTGCCCCCTGCGCCC CCTTCCCCTCCCTTTCACCCCGCACCCGCCCGCTAGAGCAAGAGCATCTG CAACAAGTTTCCGCAGTCTTCTCCGATCACGTGCATGTCGTGGCCGGAGG CTAGGCCTAACGAGGTCGTCTTCGGCCTCGCGGAGGGGAAGGTCAAGATA GGCCAGCTCAAGTCAAATAAGCCCGCGACGCTGTACAACGTTGACAGCTT CTGCGCGTCGCTGGCAACGAGCCCGGATGGCAACGGTGTGGTGTCTGCTC ACGCGGACGGGACCCTCTACCGTTTCCTCTTCGACGATAACGGTGCGTTT TCGCTCGCGTGCAGGCACGCCTGGTTGTCGGTTCGGTAGTTTCATTTGGC TACCGTTCGGTTGTTGTTTTTCTCGTGGCTTCTCTCTGAAAGGTATTTCG TTTGTATAGCGTTTAAAGACAGCAGTAGCGGTGCTTGCGTATCAAGGGCC GTCTTTGAAGCCTACTATTGTCCTACAATGTCTACCATAAACAGCCGGCG TGTGCAGCCATCTTGCCGGTGACGAAATGATACCCCTATGTGTTGCACAT GACCAAGAGAGAGAGAGAGAGAGAGAGAGAGTTGGACGAAATAACACATT TCGAGTTCCCGCATGGCGCTTGAATTTGATCGCTGTTATCTACCCCGCAC ACGGCGGGCGGACGCTCACACACGCACACACTGCAGGCGCGCCATCCCAC ACGAAGCTCGTGATCCATCCTTCCGTTCCATACGCGCTAAGCTGGGGGAT CAGCATCGTGGCCGCAGGGAACGACGGTCAGGTAACA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1949:21010..22646+

>mRNA_L-elsbetiae_contig1949.5792.1 ID=mRNA_L-elsbetiae_contig1949.5792.1|Name=mRNA_L-elsbetiae_contig1949.5792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig1949:21010..22646+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGCTGAGACATTTGAACACTTTGACGCAGCCGACCGCCGGCGAGGG
AAGTGATGACGTCAAGATGTCCAAGGTCATGGCGGTGGCTTGGGCACCGA
ACAACCGCAAGCTGGCAGTTTGCACGATGCAGCTGAGACATTTGAACACT
TTGACGCAGCCGACCGCCGGCGAGGGAAGTGATGACGTCAAGATGTCCAA
GGTCATGGCGGTGGCTTGGGCACCGAACAACCGCAAGCTGGCAGTTTGCA
CGGCGGATCGAGTGGTCTCTCTGTACGACGAAAACGGGGAAAAGCGAGAC
AGATTTTCCACCAAGCCCGCGGAGAAGGGGCCGAAGATCTACATCGTCAG
AGACCTGTGTTTCAGCCCCGATAGCACAAGGCTCGCCGTAGCCCAAAGCG
ATAGCATCGTCTTTGTCTATAAGCTCGGGTTGGAGTGGGGAGAGGCGGAT
CGAGTGGTCTCTCTGTACGACGAAAACGGGGAAAAGCGAGACAGATTTTC
CACCAAGCCCGCGGAGAAGGGGCCGAAGATCTACATCGTCAGAGACCTGT
GTTTCAGCCCCGATAGCACAAGGCTCGCCGTAGCCCAAAGCGATAGCATC
GTCTTTGTCTATAAGCTCGGGTTGGAGTGGGGAGAGAGCAAGAGCATCTG
CAACAAGTTTCCGCAGTCTTCTCCGATCACGTGCATGTCGTGGCCGGAGG
CTAGGCCTAACGAGGTCGTCTTCGGCCTCGCGGAGGGGAAGGTCAAGATA
GGCCAGCTCAAGTCAAATAAGCCCGCGACGCTGTACAACGTTGACAGCTT
CTGCGCGTCGCTGGCAACGAGCCCGGATGGCAACGGTGTGGTGTCTGCTC
ACGCGGACGGGACCCTCTACCGTTTCCTCTTCGACGATAACGAGCAAGAG
CATCTGCAACAAGTTTCCGCAGTCTTCTCCGATCACGTGCATGTCGTGGC
CGGAGGCTAGGCCTAACGAGGTCGTCTTCGGCCTCGCGGAGGGGAAGGTC
AAGATAGGCCAGCTCAAGTCAAATAAGCCCGCGACGCTGTACAACGTTGA
CAGCTTCTGCGCGTCGCTGGCAACGAGCCCGGATGGCAACGGTGTGGTGT
CTGCTCACGCGGACGGGACCCTCTACCGTTTCCTCTTCGACGATAACGGC
GCGCCATCCCACACGAAGCTCGTGATCCATCCTTCCGTTCCATACGCGCT
AAGCTGGGGGATCAGCATCGTGGCCGCAGGGAACGACGGTCAGGTAACAG
CGCGCCATCCCACACGAAGCTCGTGATCCATCCTTCCGTTCCATACGCGC
TAAGCTGGGGGATCAGCATCGTGGCCGCAGGGAACGACGGTCAGGTAACA
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