mRNA_L-elsbetiae_contig1945.5776.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1945.5776.1
Unique NamemRNA_L-elsbetiae_contig1945.5776.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Match: A0A6H5JFL2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFL2_9PHAE)

HSP 1 Score: 568 bits (1464), Expect = 4.240e-202
Identity = 285/329 (86.63%), Postives = 294/329 (89.36%), Query Frame = 2
Query:   50 RRTSTTLSMSAPDAXXXXXXXXXXXXATGEAPAXAAVPAVPGPETTVEPGARISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRKTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPSMAGFKPTMKQPAFFDIRTPTPLPDALRGEQYAFVTMPVSEFRKGNINEDNVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAFFKADLKNRELALECGINTQYLVARVQGDQRKEAQNFEEAKRALGGFHFVAVQDNPDADDVAGFWLLKEV 1036
            RR ST LSMS P                G              ETT++PGA+ISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVR+TIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYP+MAGFKPTMKQPAFFDIRTPTPLPDALRGEQYAFVTMPVSEFR+GNIN++NVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVA+FKADLKNRELALECGINTQYLVARVQGDQRKEAQ FEEAKRALGGFHFVAVQ NPDADDVAGFWLLKEV
Sbjct:   67 RRHSTGLSMSTPAESFTPPSVKEEGVGAGA-------------ETTIKPGAKISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRRTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPAMAGFKPTMKQPAFFDIRTPTPLPDALRGEQYAFVTMPVSEFRQGNINDENVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAYFKADLKNRELALECGINTQYLVARVQGDQRKEAQGFEEAKRALGGFHFVAVQSNPDADDVAGFWLLKEV 382          
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Match: A0A836CLG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG2_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 5.500e-152
Identity = 215/305 (70.49%), Postives = 254/305 (83.28%), Query Frame = 2
Query:  131 TGEAPAXAAVPAVP--GPETTVEPGARISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRKTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPSMAGFKPTMKQPAFFDIRTPTPLPDALRGEQYAFVTMPVSEFRKG-NINEDNVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAFFKADLKNRELALECGINTQYLVARVQGDQRKEAQNFEEAKRALGGFHFVAVQDNPDADDVAGFWLLKEV 1036
            +G+A A A    +P    ETT+EPGA IS++WE+DVYSRPVVG DGKKLWELL+CDSTGNF+HV  IPSNMVNSREVRK +E +IE AP   +P+ IRFFRNAMFNMI+IAL EV+V V+PCRTTYA+Y WLE RER+VYP M G+ PTM Q  FFDIRTP+ LPDALRG++YAFV +PVSEFRKG +I++ N+G+GRLCP+D  +PDDAM+ GLA+FT RA PLATW++GLEVAF KADLK REL +ECGI+TQYLVARV  DQR EAQNFE  KR+LGG HFVAVQ++PD D VAGFWLLKEV
Sbjct:   55 SGDAGAVATAAPLPLGASETTIEPGATISDQWEMDVYSRPVVGKDGKKLWELLLCDSTGNFKHVERIPSNMVNSREVRKAVERIIEEAP--LRPSTIRFFRNAMFNMINIALSEVDVTVRPCRTTYALYNWLEARERNVYPEMEGYTPTMTQGNFFDIRTPSRLPDALRGDKYAFVALPVSEFRKGGSIDDSNIGLGRLCPIDPEIPDDAMVQGLAVFTKRALPLATWLSGLEVAFMKADLKRRELVMECGISTQYLVARVTDDQRAEAQNFEAGKRSLGGLHFVAVQEDPDIDQVAGFWLLKEV 357          
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Match: A0A7S4D6F7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6F7_HETAK)

HSP 1 Score: 351 bits (900), Expect = 4.070e-117
Identity = 168/275 (61.09%), Postives = 215/275 (78.18%), Query Frame = 2
Query:  209 SNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRKTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPSMAGFKPTMKQPAFFDIRTPTPLPDALRGEQYAFVTMPVSEFRKGNINEDNVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAFFKADLKNRELALECGINTQYLVARVQGDQRKEAQNFEEAKRALGGFHFVAVQDNPDADDVAGFWLLKE 1033
            +++WELDVYSRPVV   GKKLWELLI DS+G FRH   IPSNMVNSREVRK IE  I+ A     P  IRFFRNAMFNMI+IAL E++V V P RTTY++Y+WL++RE++VYP M G+KPTM QP+FFDI+TP  LPDALRGEQYAFV++P   FR G IN+DN+G G++  L A +PDDAMI G+ + + RA  LA W++GLEVA+ +ADL+ R+  LE GI+T+YL+A+++ DQR EAQ FE+ K  + G HFV VQ++P+AD+V GFWLL+E
Sbjct:   61 TDQWELDVYSRPVVDEKGKKLWELLITDSSGAFRHEEIIPSNMVNSREVRKRIEKAIDEAE--VPPKTIRFFRNAMFNMINIALSELDVNVVPSRTTYSLYEWLDQREKEVYPKMEGYKPTMVQPSFFDIKTPEKLPDALRGEQYAFVSLPAECFRNGEINDDNIGCGKIFSLPADIPDDAMIQGMLLLSRRAGALAAWLSGLEVAYVRADLQRRDAVLETGIDTRYLMAKLRDDQRVEAQAFEQGKARMQGVHFVGVQEDPEADEVEGFWLLRE 333          
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Match: A0A7S2V5W1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5W1_9STRA)

HSP 1 Score: 332 bits (852), Expect = 9.950e-110
Identity = 159/275 (57.82%), Postives = 204/275 (74.18%), Query Frame = 2
Query:  209 SNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRKTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPSMAGFKPTMKQPAFFDIRTPTPLPDALRGEQYAFVTMPVSEFRKGNINEDNVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAFFKADLKNRELALECGINTQYLVARVQGDQRKEAQNFEEAKRALGGFHFVAVQDNPDADDVAGFWLLKE 1033
            S+EWE+DVYSRPV  A GKKLWE+LICDSTG F+H   +PSNMVNSREV+K IE VI+ AP   KP V+R+FR AM NM++IAL  +++ V P RTTY + +WLE+RE++VYP M G+ P M  P   DIRTP  LPDAL  +QYAFV +P+S FR G ++ +N+G+G+LCP+D SLPDD M+ G+ + T RA+ LA WMTGLEVAF +ADLK +E+ LE GI+TQ+ + R   +QR EAQ FE  KR   G HF+AVQ   D ++V GFWLL+E
Sbjct:   69 SDEWEVDVYSRPVKDARGKKLWEILICDSTGEFKHCQALPSNMVNSREVKKAIEKVIDDAP--VKPKVVRYFRVAMQNMLNIALGGLDMQVIPSRTTYRLLEWLEQREKEVYPQMDGYNPNMVNPPGLDIRTPQTLPDALVADQYAFVALPISYFRNGEVSAENIGLGKLCPIDPSLPDDTMVQGVVIVTRRAKALAAWMTGLEVAFVRADLKKKEMILEVGISTQFYMVRFNENQRAEAQVFENGKRQANGIHFLAVQKEFDEEEVEGFWLLRE 341          
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Match: A0A7R9Z2V2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z2V2_9STRA)

HSP 1 Score: 321 bits (822), Expect = 5.460e-105
Identity = 161/297 (54.21%), Postives = 213/297 (71.72%), Query Frame = 2
Query:  161 PAVPGPETTVEPGARISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRKTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPSMAGFKPTM----KQPAFFDIRTPTPLPDALRGEQYAFVTMPVSEFRKGN-INEDNVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAFFKADLKNRELALECGINTQYLVARVQGDQRKEAQNFEEAKRALGGFHFVAVQDNPDADDVAGFWLLKEV 1036
            P VP     V  G + + EWELD YSRPV+  +GKKLWE+L+ DS+G+FR    +PSN VNSRE+R+ +E  +E A   SKP+ IRFFR AMFNMI+IAL EV+V  +P R T+A+ QWLEER RDVYP M G++ TM    + P+F D+RTP  LPDALRGE+YAFV++P++EFR+G  +  +N+GVGRLCP+D  LP D+ + G+ + T RA+ LA+W+ G EV+ FK DL+ R L +E  I+ QYL+A++   QR E   FEE K ALGG HF++VQ + D DD AGFWLLKE+
Sbjct:   62 PVVPASTKEVIEGRQPTEEWELDCYSRPVM-VNGKKLWEVLLTDSSGSFRICETLPSNKVNSRELRRVVEEAMEDAD--SKPSTIRFFRGAMFNMINIALSEVDVVARPSRCTFALAQWLEERNRDVYPKMEGYRATMAGATRGPSFLDVRTPVKLPDALRGEKYAFVSLPLAEFREGGGVTNENIGVGRLCPVDPDLPADSFVQGIVVLTTRAKALASWLAGTEVSGFKCDLRKRTLVMETDIDNQYLMAKLNDVQRAEGAAFEEGKDALGGLHFISVQMDED-DDPAGFWLLKEI 354          
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Match: A0A7S1YY94_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YY94_TRICV)

HSP 1 Score: 316 bits (810), Expect = 9.270e-104
Identity = 161/299 (53.85%), Postives = 213/299 (71.24%), Query Frame = 2
Query:  161 PAVPGPETT-VEPGARISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRKTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPSMAGFKPTM-----KQPAFFDIRTPTPLPDALRGEQYAFVTMPVSEFRKGN-INEDNVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAFFKADLKNRELALECGINTQYLVARVQGDQRKEAQNFEEAKRALGGFHFVAVQDNPDADDVAGFWLLKEV 1036
            PAVP   T  V PG   ++EWELD YSRPV+   GKKLWE+L+ DS+G+FR    +PSN VNSRE+R+ +E  IE +   +KP+ IRFFR AMFNMI+IAL EV+V  +P R T+++ QWLEER RDVYP M G++ TM     + P+F D+RTP  LPD+LRGE+YAFV +P++EFR+G  +  DNVGVGRLCP+D  LP DA + G+ + T RA  L++W+ G EV+ FK DL+ R L +E  I+ QYL+A++   QR E   FEE K +LGG HF++VQ + D+D  AGFWLLKE+
Sbjct:   19 PAVPPASTKEVVPGRDPTDEWELDCYSRPVM-VGGKKLWEVLLTDSSGSFRLCETLPSNKVNSRELRRVVEEAIEESD--TKPSTIRFFRGAMFNMINIALSEVDVVARPSRCTFSLAQWLEERNRDVYPKMEGYRATMAGGTGRGPSFLDVRTPVRLPDSLRGEKYAFVALPLAEFREGGGVTNDNVGVGRLCPIDPELPADAFVQGIVILTTRAPALSSWLAGTEVSGFKCDLRKRTLVMETDIDNQYLMAKLNDIQRAEGTAFEEGKDSLGGLHFISVQVDEDSDP-AGFWLLKEI 313          
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Match: A0A7S4M7P1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M7P1_9STRA)

HSP 1 Score: 311 bits (798), Expect = 3.520e-101
Identity = 156/295 (52.88%), Postives = 210/295 (71.19%), Query Frame = 2
Query:  167 VPGPETTVEPGARISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRKTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPSMAGFKPTM----KQPAFFDIRTPTPLPDALRGEQYAFVTMPVSEFRKGN-INEDNVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAFFKADLKNRELALECGINTQYLVARVQGDQRKEAQNFEEAKRALGGFHFVAVQDNPDADDVAGFWLLKEV 1036
            VP     +  G   + EWELD YSRPV+  +GKKLWE+L+ DS+G+FR    +PSN VNSRE+R+ +E  +E +   +KP+ IRFFR AMFNMI+IAL EV+V  +P R T+A+ QWLEER RDVYP M G++ TM    + P+F D+RTP  LPDALRGE+YAFV++P++EFR+G  +  +N+GVGR+CP+D  LP DA + G+ + T+RA  LA+W+ G EV+ FK DL+ R L +E  I+ QYL+A++   QR E   FEE K AL G HFV+VQ + D DD AGFWLL+E+
Sbjct:   77 VPASTKELIEGREPTEEWELDCYSRPVM-VNGKKLWEVLLTDSSGSFRVCETLPSNKVNSRELRRVVEEAMEDSD--AKPSTIRFFRGAMFNMINIALSEVDVVARPSRCTFALAQWLEERNRDVYPKMDGYRATMAAGTRGPSFLDVRTPVKLPDALRGEKYAFVSLPLAEFREGGGVTNENIGVGRICPVDPELPADAFVQGVVILTSRANALASWLAGTEVSDFKCDLRKRMLVMETDIDNQYLMAKLNDVQRAEGTAFEEGKDALNGLHFVSVQTDED-DDPAGFWLLREI 367          
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Match: A0A7S2F341_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F341_9STRA)

HSP 1 Score: 310 bits (795), Expect = 4.770e-101
Identity = 151/285 (52.98%), Postives = 205/285 (71.93%), Query Frame = 2
Query:  197 GARISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRKTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVE-VAVKPCRTTYAMYQWLEERERDVYPSMAGFKPTMKQPA----FFDIRTPTPLPDALRGEQYAFVTMPVSEFRKGNINEDNVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAFFKADLKNRELALECGINTQYLVARVQGDQRKEAQNFEEAKRALGGFHFVAVQDNPDADDVAGFWLLKEV 1036
            G   ++ WELD YSRPV+  +GKK+WELLICDS+G F+HV  IPSN VNSREVR  IE VI+      +P VIRFFRN+M N++ IAL ++  + V+P R+TYAMYQWLEER ++VYP+M GFK +M +      F DI TP  LPD LR +Q+AFV++P+SE   G +N +N+GVG++CPL   LP+D+M+ G+   T R + LA+W +G ++AF +ADLK RE+ +E G++T+YL+AR+  +QR E Q FE  K  L G HFVA+Q+    D+VAGFWLL+EV
Sbjct:   63 GTAGTDVWELDCYSRPVMAKNGKKVWELLICDSSGVFQHVEEIPSNKVNSREVRGRIEKVIDNV--AVRPRVIRFFRNSMLNILSIALNDIGGIKVEPSRSTYAMYQWLEERNKNVYPTMPGFKKSMVKSGGNGMFLDISTPDRLPDMLRADQFAFVSLPLSEIIDGGVNPENIGVGQMCPLPKGLPEDSMVQGVLFLTTRGDNLASWFSGTDLAFMRADLKRREMVMEVGLSTRYLMARLNEEQRIEGQAFEAGKTVLKGLHFVAIQNTATDDEVAGFWLLREV 345          
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Match: A0A7S4T159_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T159_9STRA)

HSP 1 Score: 310 bits (794), Expect = 1.100e-100
Identity = 160/288 (55.56%), Postives = 203/288 (70.49%), Query Frame = 2
Query:  182 TTVEPGARISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRKTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPSMAGFKPTMKQ----PAFFDIRTPTPLPDALRGEQYAFVTMPVSEFRKG-NINEDNVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAFFKADLKNRELALECGINTQYLVARVQGDQRKEAQNFEEAKRALGGFHFVAVQDNPDADDVAGFWLLK 1030
            TT++    +S EWELD YSRPV   D KKLWE+LI DS G  R    +PSN VNSRE+R+ +E  IE +    KPT+IRFFR AMFNMI IAL EVEV  KP R T+A+  W+EER RDVYP M G++P M +    P+F DI  P  LPDALRGE+YAFV++P++EFR+G +IN  NVGVGRLCP+D +LP DA + G+ M T RA+ L++W+ G EVA F  DL+ R LA++  I+T+YL+A++   QR E   FEE K  LGG HFV+VQ + D DD AGFWLL+
Sbjct:   74 TTLKSEGTVSEEWELDCYSRPVT-VDNKKLWEVLITDSNGVMRVCEALPSNKVNSRELRRVVEDTIEESD--VKPTMIRFFRGAMFNMITIALSEVEVVAKPSRRTFALTSWIEERNRDVYPKMEGYRPAMARAGMGPSFLDISIPQRLPDALRGEKYAFVSLPLAEFREGGSINSSNVGVGRLCPVDPTLPADAFVQGIVMLTPRAKALSSWLAGTEVAGFTCDLRKRTLAMDTDIDTKYLIAKLNDVQRAEGAVFEEGKDNLGGLHFVSVQVDED-DDPAGFWLLR 357          
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Match: W7TRA2_9STRA (Rna binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRA2_9STRA)

HSP 1 Score: 308 bits (788), Expect = 6.010e-100
Identity = 148/278 (53.24%), Postives = 202/278 (72.66%), Query Frame = 2
Query:  203 RISNEWELDVYSRPVVGADGKKLWELLICDSTGNFRHVSPIPSNMVNSREVRKTIEGVIEAAPGGSKPTVIRFFRNAMFNMIDIALKEVEVAVKPCRTTYAMYQWLEERERDVYPSMAGFKPTMKQPA-FFDIRTPTPLPDALRGEQYAFVTMPVSEFRKGNINEDNVGVGRLCPLDASLPDDAMIPGLAMFTARAEPLATWMTGLEVAFFKADLKNRELALECGINTQYLVARVQGDQRKEAQNFEEAKRALGGFHFVAVQDNPDADDVAGFWLLKE 1033
            R++ EWELD YSRPVVG DGKKLWEL++CDS G FR V  +PSNMVNSRE+RK +E VIE AP   KP VIRFFRNAMFNM+ +ALK+++V V P R+T A+Y W++ERER+VY  + G+ P M+     F +R P  +PD L G++YAF+ +PVS+F  G +N +N G+GRL  LDASLP D  + GL ++++RA+ +A W+  +E+ F KA+   R + LE GI+TQYL+A +   +R EAQ FE+ K  LGG HF+A+Q + ++D V GF+LL+E
Sbjct:   73 RLAQEWELDCYSRPVVGEDGKKLWELMVCDSLGEFRAVETMPSNMVNSRELRKLVEKVIEDAP--VKPRVIRFFRNAMFNMVSLALKDLKVRVVPSRSTNALYSWIDEREREVYAKLPGYDPQMRDSNDVFGLREPEVMPDGLMGDKYAFMCLPVSQFLDGEVNYENSGIGRLFQLDASLPRDEQVQGLVIYSSRAKSIAAWLHSMELCFIKANFSKRIMVLEVGIDTQYLMATLNDIRRVEAQIFEQGKEKLGGVHFLALQTDEESDGVEGFFLLRE 348          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1945.5776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFL2_9PHAE4.240e-20286.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLG2_9STRA5.500e-15270.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D6F7_HETAK4.070e-11761.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V5W1_9STRA9.950e-11057.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9Z2V2_9STRA5.460e-10554.21Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1YY94_TRICV9.270e-10453.85Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4M7P1_9STRA3.520e-10152.88Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2F341_9STRA4.770e-10152.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4T159_9STRA1.100e-10055.56Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
W7TRA2_9STRA6.010e-10053.24Rna binding protein n=2 Tax=Monodopsidaceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1945contigL-elsbetiae_contig1945:12145..15015 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size1037
Cds size789
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1945.5776.1prot_L-elsbetiae_contig1945.5776.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1945 12145..13891 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815806.8837466-CDS-L-elsbetiae_contig1945:12144..127451622815806.8837466-CDS-L-elsbetiae_contig1945:12144..12745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 12145..12745 +
1691683115.158811-CDS-L-elsbetiae_contig1945:12144..127451691683115.158811-CDS-L-elsbetiae_contig1945:12144..12745Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 12145..12745 +
1622815806.8943777-CDS-L-elsbetiae_contig1945:13252..133651622815806.8943777-CDS-L-elsbetiae_contig1945:13252..13365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 13253..13365 +
1691683115.169964-CDS-L-elsbetiae_contig1945:13252..133651691683115.169964-CDS-L-elsbetiae_contig1945:13252..13365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 13253..13365 +
1622815806.9062655-CDS-L-elsbetiae_contig1945:13816..138911622815806.9062655-CDS-L-elsbetiae_contig1945:13816..13891Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 13817..13891 +
1691683115.1817021-CDS-L-elsbetiae_contig1945:13816..138911691683115.1817021-CDS-L-elsbetiae_contig1945:13816..13891Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1945 13817..13891 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815806.9239984-UTR-L-elsbetiae_contig1945:13891..139371622815806.9239984-UTR-L-elsbetiae_contig1945:13891..13937Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1945 13892..13937 +
1691683115.1932569-UTR-L-elsbetiae_contig1945:13891..139371691683115.1932569-UTR-L-elsbetiae_contig1945:13891..13937Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1945 13892..13937 +
1622815806.9359798-UTR-L-elsbetiae_contig1945:14422..145131622815806.9359798-UTR-L-elsbetiae_contig1945:14422..14513Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1945 14423..14513 +
1691683115.2045152-UTR-L-elsbetiae_contig1945:14422..145131691683115.2045152-UTR-L-elsbetiae_contig1945:14422..14513Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1945 14423..14513 +
1622815806.948462-UTR-L-elsbetiae_contig1945:14905..150151622815806.948462-UTR-L-elsbetiae_contig1945:14905..15015Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1945 14906..15015 +
1691683115.214095-UTR-L-elsbetiae_contig1945:14905..150151691683115.214095-UTR-L-elsbetiae_contig1945:14905..15015Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1945 14906..15015 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1945.5776.1

>prot_L-elsbetiae_contig1945.5776.1 ID=prot_L-elsbetiae_contig1945.5776.1|Name=mRNA_L-elsbetiae_contig1945.5776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=263bp
GRAAPEPCPADTRAKPSTNLDHVIDVCPRCCCYPVAAAAAASGDRRGSRC
CRRTCCSRTRDDCRARGENQQRVGARRLLEARRRGRRKEALGAPHLRLHG
QLPPRLPDPQQHGELERGEEDDRGGDRGGAGGLEADGDPLLPERDVQHDR
HRPEGGRGGGEAVQDDVRHVPVARGARARRVPQHGRLQAHDEATSVLRHP
DSDPVARRSARRTVRVRDHASLRVPKGQHQRRQRWGRQALPPGCVASRRR
DDSGAGHVYGKS*
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mRNA from alignment at L-elsbetiae_contig1945:12145..15015+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1945.5776.1 ID=mRNA_L-elsbetiae_contig1945.5776.1|Name=mRNA_L-elsbetiae_contig1945.5776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2871bp|location=Sequence derived from alignment at L-elsbetiae_contig1945:12145..15015+ (Laminarionema elsbetiae ELsaHSoW15)
GGCAGGGCAGCACCAGAGCCATGTCCCGCCGACACAAGGGCAAAGCCATC GACGAACCTCGACCACGTTATCGATGTCTGCCCCAGATGCTGCTGCTACC CCGTCGCCGCCGCCGCCGCCGCCTCCGGCGACCGGAGAGGCTCCCGCTGC TGCCGCCGTACCTGCTGTTCCAGGACCAGAGACGACTGTAGAGCCAGGGG CGAGAATCAGCAACGAGTGGGAGCTCGACGTTTACTCGAGGCCCGTCGTC GGGGCCGACGGAAAGAAGCTTTGGGAGCTCCTCATCTGCGACTCCACGGG CAACTTCCGCCACGTCTCCCCGATCCCCAGCAACATGGTGAACTCGAGAG AGGTGAGGAAGACGATCGAGGGGGTGATCGAGGCGGCGCCGGGGGGCTCG AAGCCGACGGTGATCCGCTTCTTCCGGAACGCGATGTTCAACATGATCGA CATCGCCCTGAAGGAGGTCGAGGTGGCGGTGAAGCCGTGCAGGACGACGT ACGCCATGTACCAGTGGCTCGAGGAGCGCGAGCGCGACGTGTACCCCAGC ATGGCCGGCTTCAAGCCCACGATGAAGCAACCAGCGTTCTTCGACATCCG GGTAAGATGAAAGGCAGCGTGTGCATTTTGAACGCAAGGGAATGAATGCA CTGAGAGCAGTCACAGTTAGATACACTCGTAGCTCAGAGGTGCAGCAGTG TTGCAGCACTTTTACCATACCCTGTATCCGAGCAAATTCCTTGACGGAGA AACGCAACGGGCATAACCCCCGCTGCTGCCTTGGCATCAAACCAGGTTAT AGATACTGCTGTACGTAGTCTCCAACAGCAGGTAAGATTTTCTCGCCTCT CCCGCCCTTCGAAGGGCGCGTTTGTCACGCACACCACGCCGCTTATCCCG AATGGAAGAGTCGCGAGCGAACTCTACCAGATGCGTGCGTTGGTAGACTA GACTTTTCATCGCGCCGTATTTGTTTAGTTTCGCCGCTTCCAGAACCTTG TCCTAAAACCTTGCCCGCACGCTCTCGTCCATCCGCCCGCCCGTCCCTCT TCGTCTCGTGGCGGGCGCCCTTAACCCGCCCGGTCGCTTGCCGCGCGCAT TCGCGTAGACTCCGACCCCGTTGCCAGACGCTCTGCGAGGAGAACAGTAC GCGTTCGTGACCATGCCAGTCTCCGAGTTCCGAAAGGGCAACATCAACGA AGACAACGTTGGGGTCGGCAGGTGGGAAGAAGCTTGGGCTTAGGGAAGCT CGCGGGGGCTGCAATCGGGAAAAGAGGCAATAAATAGCTATGCTTCGGTG CAGCCTGTGCTATTGCTATCCTTGTTGGTGGACCCAAGATGCCGTGGATG CGTTGGGTGCTCTGGTGGAATGCTGCCTCTCTCACGTTCATCTCACGTGA TTTTTCCGATTTTTCCGATTCCCAGCCCCCCCGCTGCCTGCCTGCCGAAT GACAGACAGAAGTGATTCCTTCGTCGTTCGATTTGCACTTTTTTGTTGCT GCGAGTCCCACTTACCGGTCCATGAAAATGTGGGGCCGGTCTCTTTGATG CGGTTTGTTCAAGACATCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTGTGCACCGTAACTTTTTTAATAAATGGTTCCCCAA TTTTCGTCGGCTGTAAACCCAGGCTCTGCCCCCTGGATGCGTCGCTTCCC GACGACGCGATGATTCCGGGGCTGGCCATGTTTACGGCAAGAGCTGAGCC GCTCGCGACGTGGATGACGGGCCTTGAGGTTGCCTTCTTCAAGGTGAGCA GCAGGCTGGGCGCGCCGCGCGTCTGCTGGTGTTTGTGCGTCGCGTTGTTG CAGTCAAGGGAGTGTTCCTGATGCGTGTTTCCGTTCGCAATGCGTCCAGC GTTCCACCACCCCCCCCCCCTGCGCGCAGTGTGAACAGCAAACAGATTGC CGGCAGTTTAGGTTGTTCCAGTGCTTTTGTGTTGATGATTTTATTTGATT TTTTCGGTGAAAATGGCGGAAGTGTGCGCTGTTGAGGTGGTGAGGTAGAG ACGACTGAGCGTCAAAAAATGCCGGAAGGAAAAGTACACGACTTCTGTGT GTTGCCTTGCTCGTGTCCTGGTCCAATTTGAACCGCTTTTTCGGGCTTTC AGCTGCGTGTCATGTGGCCGCGTGTGTTGACGTGGGATGGTGGTCTGACA AAAAGCACGCACAAGAAGCAGTAATTGTCGCGTGACTTACCAGCTCGTGC CCTCTCTCCTGGTGTGCCCATCCATCAGGCTGACCTCAAGAACCGAGAAC TCGCGCTGGAGTGCGGCATCAACACGCAGTACCTGGTGGCGCGTGTTCAG GGGGACCAACGCAAGGAAGGTACGCAGGCTGCATCGAATGATCGTTGCGC CCCCGTGTGTTGTTGCTTCAAAAACGCACGGTTTCATACGGTGTGTTCCT GAATGTTCTTCTCATCAAACCCTTTGATGCTCGATCACGATTATGCCTCC GATTGTCGGGGGCGGCCATCAGGCCAAAAGCCCGGATAACCAAACGCTCT CAAGACTTGCTCAGAAGTTGGATGGGAACTGTTCGAAGCCGCGTTCGTCG CTGCTTTTTCGGGTGGGATGCAGCGTTTGTATGTGTCCCAGGGCGGCAGG AAGTCACTTTTGCCCTTGCTAAATCAACACGCGCTCGGTCACCCCTCCCT TCCCTCGCCCCCGCCGCCGGAATCGTGGTTTGTTTTCGTGTAACCAACCG GCTGGCCTCAGCCCAAAATTTCGAGGAAGCAAAACGGGCGCTGGGTGGGT TCCACTTTGTGGCGGTGCAAGACAACCCCGATGCGGATGACGTCGCCGGT TTCTGGTTACTGAAGGAAGTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1945:12145..15015+

>mRNA_L-elsbetiae_contig1945.5776.1 ID=mRNA_L-elsbetiae_contig1945.5776.1|Name=mRNA_L-elsbetiae_contig1945.5776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1578bp|location=Sequence derived from alignment at L-elsbetiae_contig1945:12145..15015+ (Laminarionema elsbetiae ELsaHSoW15)
GGCAGGGCAGCACCAGAGCCATGTCCCGCCGACACAAGGGCAAAGCCATC
GACGAACCTCGACCACGTTATCGATGTCTGCCCCAGATGCTGCTGCTACC
CCGTCGCCGCCGCCGCCGCCGCCTCCGGCGACCGGAGAGGCTCCCGCTGC
TGCCGCCGTACCTGCTGTTCCAGGACCAGAGACGACTGTAGAGCCAGGGG
CGAGAATCAGCAACGAGTGGGAGCTCGACGTTTACTCGAGGCCCGTCGTC
GGGGCCGACGGAAAGAAGCTTTGGGAGCTCCTCATCTGCGACTCCACGGG
CAACTTCCGCCACGTCTCCCCGATCCCCAGCAACATGGTGAACTCGAGAG
AGGTGAGGAAGACGATCGAGGGGGTGATCGAGGCGGCGCCGGGGGGCTCG
AAGCCGACGGTGATCCGCTTCTTCCGGAACGCGATGTTCAACATGATCGA
CATCGCCCTGAAGGAGGTCGAGGTGGCGGTGAAGCCGTGCAGGACGACGT
ACGCCATGTACCAGTGGCTCGAGGAGCGCGAGCGCGACGTGTACCCCAGC
ATGGCCGGCTTCAAGCCCACGATGAAGCAACCAGCGTTCTTCGACATCCG
GGGCAGGGCAGCACCAGAGCCATGTCCCGCCGACACAAGGGCAAAGCCAT
CGACGAACCTCGACCACGTTATCGATGTCTGCCCCAGATGCTGCTGCTAC
CCCGTCGCCGCCGCCGCCGCCGCCTCCGGCGACCGGAGAGGCTCCCGCTG
CTGCCGCCGTACCTGCTGTTCCAGGACCAGAGACGACTGTAGAGCCAGGG
GCGAGAATCAGCAACGAGTGGGAGCTCGACGTTTACTCGAGGCCCGTCGT
CGGGGCCGACGGAAAGAAGCTTTGGGAGCTCCTCATCTGCGACTCCACGG
GCAACTTCCGCCACGTCTCCCCGATCCCCAGCAACATGGTGAACTCGAGA
GAGGTGAGGAAGACGATCGAGGGGGTGATCGAGGCGGCGCCGGGGGGCTC
GAAGCCGACGGTGATCCGCTTCTTCCGGAACGCGATGTTCAACATGATCG
ACATCGCCCTGAAGGAGGTCGAGGTGGCGGTGAAGCCGTGCAGGACGACG
TACGCCATGTACCAGTGGCTCGAGGAGCGCGAGCGCGACGTGTACCCCAG
CATGGCCGGCTTCAAGCCCACGATGAAGCAACCAGCGTTCTTCGACATCC
GGACTCCGACCCCGTTGCCAGACGCTCTGCGAGGAGAACAGTACGCGTTC
GTGACCATGCCAGTCTCCGAGTTCCGAAAGGGCAACATCAACGAAGACAA
CGTTGGGGTCGGCAGACTCCGACCCCGTTGCCAGACGCTCTGCGAGGAGA
ACAGTACGCGTTCGTGACCATGCCAGTCTCCGAGTTCCGAAAGGGCAACA
TCAACGAAGACAACGTTGGGGTCGGCAGGCTCTGCCCCCTGGATGCGTCG
CTTCCCGACGACGCGATGATTCCGGGGCTGGCCATGTTTACGGCAAGAGC
TGAGCTCTGCCCCCTGGATGCGTCGCTTCCCGACGACGCGATGATTCCGG
GGCTGGCCATGTTTACGGCAAGAGCTGA
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